EWM20565.1, cds10108 (CDS) Nannochloropsis gaditana

Overview
NameEWM20565.1
Unique Namecds10108
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037263.1:49069..49314 +
Alignment locationKK037263.1:49658..49774 +

Link to JBrowse

Properties
Property NameValue
End range.
End range49774
Protein idEWM20565.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100599g2.9556.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037263.1supercontigKK037263.1:49069..49314 +
KK037263.1supercontigKK037263.1:49658..49774 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM20565.1 vs. NCBI_GenBank
Match: gi|585100279|gb|EWM20565.1| (hypothetical protein Naga_100599g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 239.58 bits (610), Expect = 5.117e-80
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 
Query:    1 MFSSGMLGSVRKTGIGPTTLHHAHQASRMGGSSSSLPQYKGMGSSDMAPFNGFREEGRGSGGDDRNPHLGSLVKNERGLREEGVLPVSPLRRLSTCLSVLIILVSTASLCLHGLLLLSPAT 121
            MFSSGMLGSVRKTGIGPTTLHHAHQASRMGGSSSSLPQYKGMGSSDMAPFNGFREEGRGSGGDDRNPHLGSLVKNERGLREEGVLPVSPLRRLSTCLSVLIILVSTASLCLHGLLLLSPAT
Sbjct:    1 MFSSGMLGSVRKTGIGPTTLHHAHQASRMGGSSSSLPQYKGMGSSDMAPFNGFREEGRGSGGDDRNPHLGSLVKNERGLREEGVLPVSPLRRLSTCLSVLIILVSTASLCLHGLLLLSPAT 121
The following BLAST results are available for this feature:
BLAST of EWM20565.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100279|gb|EWM20565.1|5.117e-80100.00hypothetical protein Naga_100599g2, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10139rna10139Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications