EWM20570.1, cds10103 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20570.1 vs. NCBI_GenBank
Match: gi|553193511|ref|XP_005855790.1| (hypothetical protein NGA_0630800, partial [Nannochloropsis gaditana CCMP526] >gi|422293266|gb|EKU20566.1| hypothetical protein NGA_0630800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 820.461 bits (2118), Expect = 0.000e+0 Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0 Query: 1 FLLLAAATVGTAKFNNITGGLPNARRPKYPGTKKCDPTRCICTPEAFIEAFLNTPNLSGNLTTNPNLNSTVIPFPVCVGEELVGRVNGNGIPPLTPTLSPLDRQKHMTFVFDNIGLEKILALGQYRAKQILSLIGYGAIDTFSCNPDPAKQQLVVLQIKEPNVGGACRRKNPNDPYSKIPNKCNRKLRMSAIWDNALVWLERVFRKDLSRFEPAMNILKTTRFETLTGCRPDDVAKLYFPFDRTFANLTAAGCSDVFANAVVEFATTPCYKPSIAQMNEYASKYLYYSEGRKGRKTNYCEADILLQQLDPTSPDIAQQLRAYFFITQSFNGYYAGYGWTANDYALPQIPEWWINNQLYAKATWASVGLNCSMSSDPAEVQAFSVENAFVPYMAGFN 396 FLLLAAATVGTAKFNNITGGLPNARRPKYPGTKKCDPTRCICTPEAFIEAFLNTPNLSGNLTTNPNLNSTVIPFPVCVGEELVGRVNGNGIPPLTPTLSPLDRQKHMTFVFDNIGLEKILALGQYRAKQILSLIGYGAIDTFSCNPDPAKQQLVVLQIKEPNVGGACRRKNPNDPYSKIPNKCNRKLRMSAIWDNALVWLERVFRKDLSRFEPAMNILKTTRFETLTGCRPDDVAKLYFPFDRTFANLTAAGCSDVFANAVVEFATTPCYKPSIAQMNEYASKYLYYSEGRKGRKTNYCEADILLQQLDPTSPDIAQQLRAYFFITQSFNGYYAGYGWTANDYALPQIPEWWINNQLYAKATWASVGLNCSMSSDPAEVQAFSVENAFVPYMAGFN Sbjct: 2 FLLLAAATVGTAKFNNITGGLPNARRPKYPGTKKCDPTRCICTPEAFIEAFLNTPNLSGNLTTNPNLNSTVIPFPVCVGEELVGRVNGNGIPPLTPTLSPLDRQKHMTFVFDNIGLEKILALGQYRAKQILSLIGYGAIDTFSCNPDPAKQQLVVLQIKEPNVGGACRRKNPNDPYSKIPNKCNRKLRMSAIWDNALVWLERVFRKDLSRFEPAMNILKTTRFETLTGCRPDDVAKLYFPFDRTFANLTAAGCSDVFANAVVEFATTPCYKPSIAQMNEYASKYLYYSEGRKGRKTNYCEADILLQQLDPTSPDIAQQLRAYFFITQSFNGYYAGYGWTANDYALPQIPEWWINNQLYAKATWASVGLNCSMSSDPAEVQAFSVENAFVPYMAGFN 397
BLAST of EWM20570.1 vs. NCBI_GenBank
Match: gi|585100290|gb|EWM20570.1| (hypothetical protein Naga_101450g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 820.076 bits (2117), Expect = 0.000e+0 Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0 Query: 1 FLLLAAATVGTAKFNNITGGLPNARRPKYPGTKKCDPTRCICTPEAFIEAFLNTPNLSGNLTTNPNLNSTVIPFPVCVGEELVGRVNGNGIPPLTPTLSPLDRQKHMTFVFDNIGLEKILALGQYRAKQILSLIGYGAIDTFSCNPDPAKQQLVVLQIKEPNVGGACRRKNPNDPYSKIPNKCNRKLRMSAIWDNALVWLERVFRKDLSRFEPAMNILKTTRFETLTGCRPDDVAKLYFPFDRTFANLTAAGCSDVFANAVVEFATTPCYKPSIAQMNEYASKYLYYSEGRKGRKTNYCEADILLQQLDPTSPDIAQQLRAYFFITQSFNGYYAGYGWTANDYALPQIPEWWINNQLYAKATWASVGLNCSMSSDPAEVQAFSVENAFVPYMAGFN 396 FLLLAAATVGTAKFNNITGGLPNARRPKYPGTKKCDPTRCICTPEAFIEAFLNTPNLSGNLTTNPNLNSTVIPFPVCVGEELVGRVNGNGIPPLTPTLSPLDRQKHMTFVFDNIGLEKILALGQYRAKQILSLIGYGAIDTFSCNPDPAKQQLVVLQIKEPNVGGACRRKNPNDPYSKIPNKCNRKLRMSAIWDNALVWLERVFRKDLSRFEPAMNILKTTRFETLTGCRPDDVAKLYFPFDRTFANLTAAGCSDVFANAVVEFATTPCYKPSIAQMNEYASKYLYYSEGRKGRKTNYCEADILLQQLDPTSPDIAQQLRAYFFITQSFNGYYAGYGWTANDYALPQIPEWWINNQLYAKATWASVGLNCSMSSDPAEVQAFSVENAFVPYMAGFN Sbjct: 1 FLLLAAATVGTAKFNNITGGLPNARRPKYPGTKKCDPTRCICTPEAFIEAFLNTPNLSGNLTTNPNLNSTVIPFPVCVGEELVGRVNGNGIPPLTPTLSPLDRQKHMTFVFDNIGLEKILALGQYRAKQILSLIGYGAIDTFSCNPDPAKQQLVVLQIKEPNVGGACRRKNPNDPYSKIPNKCNRKLRMSAIWDNALVWLERVFRKDLSRFEPAMNILKTTRFETLTGCRPDDVAKLYFPFDRTFANLTAAGCSDVFANAVVEFATTPCYKPSIAQMNEYASKYLYYSEGRKGRKTNYCEADILLQQLDPTSPDIAQQLRAYFFITQSFNGYYAGYGWTANDYALPQIPEWWINNQLYAKATWASVGLNCSMSSDPAEVQAFSVENAFVPYMAGFN 396
BLAST of EWM20570.1 vs. NCBI_GenBank
Match: gi|971511287|dbj|GAQ86914.1| (hypothetical protein KFL_003200060 [Klebsormidium nitens]) HSP 1 Score: 75.8702 bits (185), Expect = 2.067e-11 Identity = 91/355 (25.63%), Postives = 138/355 (38.87%), Query Frame = 0 Query: 11 TAKFNNITGGLPNARRPKYPGTKKC-----DPTRCICTPEAFIEAFLNTPNLSGNLTTNPNLNSTVIPFPVCVGEELVGRVNGNGIPP----LTPTLSPLDRQKHMTFVFDNIGLEKILALGQYRAKQILSLIGYGAIDTFSCNPDPAKQQLVVLQIKEPNVGGACRRKNPNDPYSKIPNKCNRKLRMSAIWDNALVWLERVFRKDLSRFEPAMNILKTTRFETLTGCRPDDVA-KLYFPFDRTFANLTAAGCSDVFANAVVEFATTPCYKPSIAQMNEYASKYLYYSEGRKGRKTNYCEADILLQQLDPTSPDIAQQLRAYFFITQSFNGYYAGYGWTANDYALPQIPEWWINN 355 TA+ + L A +P T C DP +CI TP +++ + ++ LN T CV + ++GR+ L P LS ++ + F LEKIL G A + + +GYG D F C P + Q + C KN + W N ++ + K+L + + L+ T F LT C PD + K + P A AGCS + A+ +F C N+ + + Y++ C A+ L L SP +LRA+ TQ F Y GY +TAN+Y P E+WI+N Sbjct: 62 TAQLKAASMQLSAANKPGSKHTDACMARAHDP-QCIKTPAEYVKILMERSK------SHVALNRTA-----CVADNMLGRMYTGAFQSDDWQLDPVLSNAPARR-IIFAIGPRMLEKILVWGHNAADKAVKSLGYG--DAFVCGGAPDYR--ASCQYRLLVWTSECTVKNEGP-------------LVRGDWANLEAFMREDYGKELPKLTRQIAELEATTFRELTKCDPDVLQIKAWDP-----AQQVKAGCSPEYIAALAKFPYKAC--------NDSSPQVTKYTK---------CPAEEAL--LHGGSPPTTLELRAFLQQTQGFMPQYTGYSYTANEYDDPLSQEFWIHN 362 The following BLAST results are available for this feature:
BLAST of EWM20570.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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