EWM30580.1, cds101 (CDS) Nannochloropsis gaditana

Overview
NameEWM30580.1
Unique Namecds101
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:276349..276606 -
Alignment locationCM002455.1:275870..276185 -
Alignment locationCM002455.1:275588..275721 -
Alignment locationCM002455.1:275336..275440 -
Alignment locationCM002455.1:274650..274920 -
Alignment locationCM002455.1:274411..274510 -
Alignment locationCM002455.1:274129..274264 -
Alignment locationCM002455.1:273503..273643 -
Alignment locationCM002455.1:273193..273369 -
Alignment locationCM002455.1:272899..273047 -
Alignment locationCM002455.1:272644..272732 -
Alignment locationCM002455.1:272327..272499 -
Alignment locationCM002455.1:272064..272177 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30580.1
ProductHelicase-associated domain protein
Orig transcript idgnl|cribi|Naga_100033g25.8419.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:276349..276606 -
CM002455.1supercontigCM002455.1:275870..276185 -
CM002455.1supercontigCM002455.1:275588..275721 -
CM002455.1supercontigCM002455.1:275336..275440 -
CM002455.1supercontigCM002455.1:274650..274920 -
CM002455.1supercontigCM002455.1:274411..274510 -
CM002455.1supercontigCM002455.1:274129..274264 -
CM002455.1supercontigCM002455.1:273503..273643 -
CM002455.1supercontigCM002455.1:273193..273369 -
CM002455.1supercontigCM002455.1:272899..273047 -
CM002455.1supercontigCM002455.1:272644..272732 -
CM002455.1supercontigCM002455.1:272327..272499 -
CM002455.1supercontigCM002455.1:272064..272177 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003723RNA binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0004386helicase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
GO:0005829cytosol
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR011709DUF1605
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR007502Helicase-assoc_dom
Homology
BLAST of EWM30580.1 vs. NCBI_GenBank
Match: gi|585113247|gb|EWM30580.1| (Helicase-associated domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1496.49 bits (3873), Expect = 0.000e+0
Identity = 720/720 (100.00%), Postives = 720/720 (100.00%), Query Frame = 0
Query:    1 MSKRGFDSGPMGGVGGEMGQTRKQRIDLADLRPGGSGNGGIAPVGGINPYTNRPYSSKYHDILAKRRGLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFLVDAGYTRDGYCVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIRDESANYTSTHGELAVYPLYSSLPPTQQQKIFSEAPGPQAPGAPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVEDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHRMSELPLDPQAAKMVLSAPDFGCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQHGGSKDWCWDNFINVRSMGSAENVRTQLERMLTRMEVPLLSPDFNAPDYYTRIKKALTAGGYMQVAHLQKTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTVTAVECEWLLEIAPHYYDLANFPKGETKNELEACAKRLYQL 720
            MSKRGFDSGPMGGVGGEMGQTRKQRIDLADLRPGGSGNGGIAPVGGINPYTNRPYSSKYHDILAKRRGLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFLVDAGYTRDGYCVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIRDESANYTSTHGELAVYPLYSSLPPTQQQKIFSEAPGPQAPGAPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVEDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHRMSELPLDPQAAKMVLSAPDFGCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQHGGSKDWCWDNFINVRSMGSAENVRTQLERMLTRMEVPLLSPDFNAPDYYTRIKKALTAGGYMQVAHLQKTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTVTAVECEWLLEIAPHYYDLANFPKGETKNELEACAKRLYQL
Sbjct:    1 MSKRGFDSGPMGGVGGEMGQTRKQRIDLADLRPGGSGNGGIAPVGGINPYTNRPYSSKYHDILAKRRGLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFLVDAGYTRDGYCVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIRDESANYTSTHGELAVYPLYSSLPPTQQQKIFSEAPGPQAPGAPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVEDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHRMSELPLDPQAAKMVLSAPDFGCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQHGGSKDWCWDNFINVRSMGSAENVRTQLERMLTRMEVPLLSPDFNAPDYYTRIKKALTAGGYMQVAHLQKTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTVTAVECEWLLEIAPHYYDLANFPKGETKNELEACAKRLYQL 720          
BLAST of EWM30580.1 vs. NCBI_GenBank
Match: gi|298712520|emb|CBJ26788.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 1080.47 bits (2793), Expect = 0.000e+0
Identity = 512/674 (75.96%), Postives = 593/674 (87.98%), Query Frame = 0
Query:   46 GINPYTNRPYSSKYHDILAKRRGLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFLVDAGYTRDGY-CVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIRDE--SANYTSTHGELAVYPLYSSLPPTQQQKIFSEAPGPQAPGAPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVEDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHRMSELPLDPQAAKMVLSAPDFGCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQHGGSKDWCWDNFINVRSMGSAENVRTQLERMLTRMEVPLLSPDFNAPDYYTRIKKALTAGGYMQVAHLQKTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTVTAVECEWLLEIAPHYYDLANFPKGETKNELEACAKR 716
            GINP+T  PYS KY+DIL KR+ LPV++FLDDL+ KVK NQ VVVEGETGSGKTTQIPQFLV+AGY   G  CVACTQPRRVAAMSIA RVS+EMDV +G+ VGY+IRFE  +GP+T+L F+TDGMLLREAM DP L KYK IVLDEAHERTLATDVLMGL+K+VL+ RPDM++VVMSATLDAEKFQKYF +APLL+VPGR F VE+FYTP PERDYV+AA+RT +QIH CE+PGD+L+FLTGE EIEDACR IR E   +   +  GELAVYPLYSSLPP  QQKIF EAPGP+ PG P GRKVVVSTN+AETSLTIDGIVYVVDPGFSKQK+YNPR+RVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTE+SF+++L EQTYPEILRS+MSN VLTLLKLGVEDLVHFDFMDPPAPETL RALE LNYLGA+ DEG +T +G++MSELPLDPQ AK++L++PD+GCSNE+L+IV+MLSVPQVFMRPKEA K ADEAKA+FAH+DGDHLTLLNAYHAYKQ+GGSKDWC+ NFIN RSM SAENVR QL R++ R+E+ ++S +F A DYYT IKKALTAG +MQVAHL+++G YLTVKD+Q+VSIHPSSVLD KP W ++ +FVLTSKNYIRTVT V+ +WL+EIAPHY+DL NFP+ E K++LEA  +R
Sbjct:   29 GINPFTGAPYSRKYYDILEKRKKLPVHQFLDDLMDKVKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVNLGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVLMGLIKEVLKNRPDMRVVVMSATLDAEKFQKYFDNAPLLKVPGRTFPVEIFYTPTPERDYVEAAVRTVVQIHKCEDPGDVLLFLTGEVEIEDACRAIRAEVEKSQDPTKEGELAVYPLYSSLPPAAQQKIFREAPGPKFPGGPVGRKVVVSTNVAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEQSFKEELLEQTYPEILRSKMSNTVLTLLKLGVEDLVHFDFMDPPAPETLMRALELLNYLGALDDEGSLTDLGNKMSELPLDPQLAKVLLASPDYGCSNEVLSIVAMLSVPQVFMRPKEAQKAADEAKAEFAHIDGDHLTLLNAYHAYKQNGGSKDWCFSNFINSRSMVSAENVREQLGRLMGRLELRMVSTEFTARDYYTNIKKALTAGMFMQVAHLERSGHYLTVKDNQVVSIHPSSVLDNKPVWCMFEEFVLTSKNYIRTVTGVQADWLVEIAPHYFDLENFPECEAKHDLEAVYRR 702          
BLAST of EWM30580.1 vs. NCBI_GenBank
Match: gi|552848928|ref|XP_005852221.1| (hypothetical protein CHLNCDRAFT_33628 [Chlorella variabilis] >gi|307111885|gb|EFN60119.1| hypothetical protein CHLNCDRAFT_33628 [Chlorella variabilis])

HSP 1 Score: 1008.82 bits (2607), Expect = 0.000e+0
Identity = 474/707 (67.04%), Postives = 578/707 (81.75%), Query Frame = 0
Query:   22 RKQRIDLADLRPGGSGNGGI-----APVGG-----INPYTNRPYSSKYHDILAKRRGLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFLVDAGYTRDGYCVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIRDESANYTSTHGELAVYPLYSSLPPTQQQKIFSEAPGPQAPGAPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVEDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHRMSELPLDPQAAKMVLSAPDFGCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQHGGSKDWCWDNFINVRSMGSAENVRTQLERMLTRMEVPLLSPDFNAPDYYTRIKKALTAGGYMQVAHLQKTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTVTAVECEWLLEIAPHYYDLANFPKGETKNELEACAKRLY 718
            RK+++++ D  P  +G GG      AP  G     INPYT R YS++YH IL+ R+GLPV++   D +  V  +Q +++ GETGSGKTTQI QF+ +AGY   G  V CTQPRRVAAMS+A+RV+EEMDV +GEEVGY+IRFE+CSGP+T++KF TDGMLLREAM DP+L+KY VI+LDEAHERTLATDVL GLLK+VL++R D+K+VVMSATL+AEKFQ YF DAPL++VPGR+  VE+FYT EPERDY++AAIRT +QIH CE PGDILVFLTGEEEIEDACRKI  E  N   + G + VYPLYS+LPP QQQ+IF  AP    PG P GRK++VSTNIAETSLTIDGIV+V+DPGF+KQK+YNPR+RVESLLVSPISRASA QR+GRAGRT+PGKCFRLYTE SF KDLQEQTYPEILRS + +VVL L KLG++DLVHFDFMDPPAPETL RALE LNYLGA+ DEG +TQ+G  M+E PLDPQ +KM+++AP+F CSNEIL+I +MLS+P VF+RP+EA K ADEAKA+FAH+DGDHLTLLN YHAYKQHG   +WC+ NF+N RS+ SA+NVR QL R+ TR++V L+S DFN+ DYYT I+KAL AG +MQVAHL++TG YLT KD+Q+V +HPS+ LD KP W LY +FVLTSKNYIRTVT ++ EWL+++APHY+D+ NFP GE +  LE    RLY
Sbjct:    3 RKRKLEVYDGVPQANGGGGAYQNTAAPPAGDPHANINPYTGRSYSARYHQILSTRQGLPVWQAKADFINMVNSSQTIILVGETGSGKTTQIAQFIAEAGYCAGGKKVVCTQPRRVAAMSVARRVAEEMDVALGEEVGYSIRFEECSGPRTIIKFATDGMLLREAMTDPLLEKYSVIILDEAHERTLATDVLFGLLKEVLKQRQDLKLVVMSATLEAEKFQGYFLDAPLIKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHSCEGPGDILVFLTGEEEIEDACRKITKEVNNLGDSVGPIKVYPLYSTLPPQQQQRIFDPAPPAARPGGPAGRKIIVSTNIAETSLTIDGIVFVIDPGFAKQKVYNPRIRVESLLVSPISRASAHQRAGRAGRTKPGKCFRLYTEASFYKDLQEQTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALEMLNYLGALDDEGNLTQVGTVMAEFPLDPQLSKMIVAAPEFKCSNEILSIAAMLSIPNVFVRPREAMKAADEAKARFAHIDGDHLTLLNVYHAYKQHGDDSEWCYANFLNNRSLKSADNVRGQLVRICTRLQVQLVSTDFNSRDYYTNIRKALVAGYFMQVAHLERTGHYLTAKDNQVVYLHPSTCLDHKPEWALYQEFVLTSKNYIRTVTDIKGEWLVDLAPHYFDMTNFPAGEARRALE----RLY 705          
BLAST of EWM30580.1 vs. NCBI_GenBank
Match: gi|1026776313|gb|OAE35059.1| (hypothetical protein AXG93_3253s1250 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 1002.66 bits (2591), Expect = 0.000e+0
Identity = 470/705 (66.67%), Postives = 574/705 (81.42%), Query Frame = 0
Query:   18 MGQTRKQRIDLADLRPGGSGNGGIAPVGGI---NPYTNRPYSSKYHDILAKRRGLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFLVDAGYTRDGYCVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIRDESANYTSTHGELAVYPLYSSLPPTQQQKIFSEAPGPQAPGAPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVEDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHRMSELPLDPQAAKMVLSAPDFGCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQHGGSKDWCWDNFINVRSMGSAENVRTQLERMLTRMEVPLLSPDFNAPDYYTRIKKALTAGGYMQVAHLQKTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTVTAVECEWLLEIAPHYYDLANFPKGETKNELEACAKRLYQ 719
            MG  RK+++ L D+    S   G     G+   NPYTNRPYS +Y++IL KRR LPV++   + L  + K+Q +++ GETGSGKTTQIPQF+V+AGYT +   +ACTQPRRVAAMS+++RV++EMDVT+GEEVGY+IRFEDCSG KT LK+LTDGML REAM DP+L++YKVI+LDEAHERTLATDVL GLLK+VL+ RPD+K+VVMSATL+AEKFQ YF  APL++VPGR+  VE+FYT +PERDY++AAIRT +QIH+CE PGDILVFLTGEEEIEDACRKI  E  N     G + V PLYS+LPP+ QQKIF  AP P   G PPGRK+VVSTNIAETSLTIDGIVYV+DPGF+KQK+YNPR+RVESLLVSPIS+ASA QR+GRAGRT+PGKCFRLYTEKSFQ DL  QTYPEILRS ++NVVLTL KLG++DLVHFDFMDPPAPETL RALE LNYLGA+ D+G +T MG  MSE PLDPQ +KM++ +P F CSNEIL+I +MLSVP  F+RP+EA K ADEAKA+FAHVDGDHLTLLN YHAYKQ+     WC+DNF+N+R++ SA+NVR QL R++ R  + + S +F +P YY  I+KA+ AG +MQVAHL++TG YLTVKD+Q+V +HPS+ LD KP WV+Y +FVLTS+N+IR VT V+ EWL++IAPHYYDL NFP+ E +  LE    RLYQ
Sbjct:    1 MGSERKRKLSLFDVVEDTSSLAGKTKANGVPLLNPYTNRPYSQRYYEILEKRRTLPVWQQKQEFLDILAKHQTMILVGETGSGKTTQIPQFVVEAGYTANRKQIACTQPRRVAAMSVSRRVADEMDVTIGEEVGYSIRFEDCSGAKTCLKYLTDGMLQREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQAYFNGAPLMKVPGRLHPVEIFYTQDPERDYLEAAIRTVVQIHICENPGDILVFLTGEEEIEDACRKITREVQNLGDQVGPVKVVPLYSTLPPSMQQKIFEAAPAPAKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFQNDLHPQTYPEILRSNLANVVLTLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDDGNLTSMGELMSEFPLDPQMSKMLVISPKFNCSNEILSITAMLSVPNCFLRPREAQKAADEAKARFAHVDGDHLTLLNVYHAYKQNSEDPTWCYDNFVNIRALKSADNVRGQLVRIMNRHNLKMCSTEFTSPAYYPNIRKAMLAGYFMQVAHLERTGHYLTVKDNQMVHLHPSTCLDHKPEWVIYNEFVLTSRNFIRIVTDVKGEWLIDIAPHYYDLTNFPQCEARRVLE----RLYQ 701          
BLAST of EWM30580.1 vs. NCBI_GenBank
Match: gi|168065858|ref|XP_001784863.1| (predicted protein [Physcomitrella patens] >gi|162663569|gb|EDQ50326.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 1000.73 bits (2586), Expect = 0.000e+0
Identity = 472/708 (66.67%), Postives = 581/708 (82.06%), Query Frame = 0
Query:   18 MGQTRKQRI---DLADLRPGGS----GNGGIAPVGGINPYTNRPYSSKYHDILAKRRGLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFLVDAGYTRDGYCVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIRDESANYTSTHGELAVYPLYSSLPPTQQQKIFSEAPGPQAPGAPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVEDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHRMSELPLDPQAAKMVLSAPDFGCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQHGGSKDWCWDNFINVRSMGSAENVRTQLERMLTRMEVPLLSPDFNAPDYYTRIKKALTAGGYMQVAHLQKTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTVTAVECEWLLEIAPHYYDLANFPKGETKNELEACAKRLY 718
            M   RK+++   D+ D    GS    GNGG  PV  +NP+T RPYS+KY +IL KRR LPV++   + L+ + KNQ +++ GETGSGKTTQIPQF+V+AGYT +   VACTQPRRVAAMS+++RV++EMDVT+G+EVGY+IRFEDCSGPKT LK+LTDGMLLREAM DP+L++Y+VI+LDEAHERTLATDVL GLLK+VL+ RPD+K+VVMSATL+AEKFQ YF  APL++VPGR+  VE+FYT EPERDY++AAIRT +QIH+CE PGDILVFLTGEEEIEDAC+KI  E  N     G +   PLYS+LPP  QQKIF  AP P   G PPGRK+VVSTNIAETSLTIDGIVYV+DPGF+KQK+YNPR+RVESLLVSPIS+ASA QR+GRAGRT+PGKCFRLYTEKSFQ DLQ QTYPEILRS ++NVVLTL KLG++DLVHFDFMDPPAPETL RALE LNYL A+ D+G +T++G  MSE PLDPQ +KM++ +P+F CSNEIL++ +MLSVP  FMRP++A K ADEAKA+F+H+DGDHLTLLN YHA+KQ+G    WC++NFIN R++ SA+NVRTQL R++ R  + + S DFN+ DYY  I+KA+ AG +MQVAHL++TG YLTVKD+Q+V +HPSS LD KP WVLY +FVLT++N+IR VT V  EWL+++APHYYDL+NFP+ E +  LE    RLY
Sbjct:    1 MAGERKRKLSLFDVVDEAANGSEKSKGNGGGGPV--LNPHTGRPYSAKYFEILEKRRTLPVWQQKAEFLSILAKNQTMILVGETGSGKTTQIPQFVVEAGYTTNRKQVACTQPRRVAAMSVSRRVADEMDVTIGDEVGYSIRFEDCSGPKTTLKYLTDGMLLREAMTDPLLERYRVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQAYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHICEPPGDILVFLTGEEEIEDACKKIGREVQNLGDQVGPVKAVPLYSTLPPAMQQKIFDAAPPPAKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFQNDLQPQTYPEILRSNLANVVLTLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTKLGELMSEFPLDPQMSKMLVVSPEFNCSNEILSVTAMLSVPNCFMRPRDAQKAADEAKARFSHIDGDHLTLLNVYHAFKQNGEDATWCFENFINARALKSADNVRTQLVRIMNRYNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQMVHLHPSSCLDHKPEWVLYNEFVLTTRNFIRIVTDVRGEWLIDVAPHYYDLSNFPQCEGRRVLE----RLY 702          
BLAST of EWM30580.1 vs. NCBI_GenBank
Match: gi|168005694|ref|XP_001755545.1| (predicted protein [Physcomitrella patens] >gi|168005698|ref|XP_001755547.1| predicted protein [Physcomitrella patens] >gi|162693252|gb|EDQ79605.1| predicted protein [Physcomitrella patens] >gi|162693254|gb|EDQ79607.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 996.112 bits (2574), Expect = 0.000e+0
Identity = 469/704 (66.62%), Postives = 577/704 (81.96%), Query Frame = 0
Query:   18 MGQTRKQRIDLADL-RPGGSGNGGIAPVGG--INPYTNRPYSSKYHDILAKRRGLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFLVDAGYTRDGYCVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIRDESANYTSTHGELAVYPLYSSLPPTQQQKIFSEAPGPQAPGAPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVEDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHRMSELPLDPQAAKMVLSAPDFGCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQHGGSKDWCWDNFINVRSMGSAENVRTQLERMLTRMEVPLLSPDFNAPDYYTRIKKALTAGGYMQVAHLQKTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTVTAVECEWLLEIAPHYYDLANFPKGETKNELEACAKRLY 718
            M   RK+++ L D+     +G   +   GG  +NP+T RPYS+KY +IL KRR LPV++   + L  + KNQ +++ GETGSGKTTQIPQF+V+AGYT +   VACTQPRRVAAMS+++RV++EMDVT+G+EVGY+IRFEDCSGPKT LK+LTDGMLLREAM DP+L++Y+VI+LDEAHERTLATDVL GLLK+VL+ RPD+K+VVMSATL+AEKFQ YF  APL++VPGR+  VE+FYT EPERDY++AAIRT +QIH+CE  GDILVFLTGEEEIEDAC+KI  E  N     G +   PLYS+LPP  QQKIF  AP P   G PPGRK+VVSTNIAETSLTIDGIVYV+DPGF+KQK+YNPR+RVESLLVSPIS+ASA QR+GRAGRT+PGKCFRLYTEKSFQ DLQ QTYPEILRS ++NVVLTL KLG++DLVHFDFMDPPAPETL RALE LNYL A+ D+G +T++G  MSE PLDPQ +KM++ +P+F CSNEIL+I +MLSVP  F+RP++A K ADEAKA+F+H+DGDHLTLLN YHAYKQ+G    WC+DNFINVR+M SA+NVRTQL R++ R  + + S DFN+ DYY  I+KA+ AG +MQVAHL++TG YLTVKD+Q+V +HPSS LD KP WV+Y +FVLT++N+IR VT V  EWL+++APHYYDL+NFP+ E +  LE    RLY
Sbjct:    1 MAGERKRKLSLFDVVDESVNGTEKMKANGGPVLNPHTGRPYSAKYFEILEKRRTLPVWQQKAEFLNILAKNQTMILVGETGSGKTTQIPQFVVEAGYTSNRKQVACTQPRRVAAMSVSRRVADEMDVTIGDEVGYSIRFEDCSGPKTTLKYLTDGMLLREAMTDPLLERYRVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQAYFNGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHICEPAGDILVFLTGEEEIEDACKKIGREVQNLGDQVGPVKAVPLYSTLPPAMQQKIFDAAPPPAKDGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPGKCFRLYTEKSFQNDLQPQTYPEILRSNLANVVLTLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTKLGELMSEFPLDPQMSKMLVVSPEFNCSNEILSITAMLSVPNCFLRPRDAQKAADEAKARFSHIDGDHLTLLNVYHAYKQNGEDATWCYDNFINVRAMKSADNVRTQLVRIMNRYNLKMCSTDFNSRDYYVSIRKAMLAGYFMQVAHLERTGHYLTVKDNQMVHLHPSSCLDHKPEWVIYNEFVLTTRNFIRIVTDVRGEWLIDVAPHYYDLSNFPQCEARRVLE----RLY 700          
BLAST of EWM30580.1 vs. NCBI_GenBank
Match: gi|729448747|ref|XP_010522836.1| (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [Tarenaya hassleriana])

HSP 1 Score: 993.03 bits (2566), Expect = 0.000e+0
Identity = 468/709 (66.01%), Postives = 571/709 (80.54%), Query Frame = 0
Query:   18 MGQTRKQRIDLADL--RPG---GSGNGGIAPVGGINPYTNRPYSSKYHDILAKRRGLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFLVDA-----GYTRDGYCVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIRDESANYTSTHGELAVYPLYSSLPPTQQQKIFSEAPGPQAPGAPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVEDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHRMSELPLDPQAAKMVLSAPDFGCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQHGGSKDWCWDNFINVRSMGSAENVRTQLERMLTRMEVPLLSPDFNAPDYYTRIKKALTAGGYMQVAHLQKTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTVTAVECEWLLEIAPHYYDLANFPKGETKNELEACAKR 716
            MG  RK+++ L D+   P       NGG      IN +T RPY+ KY +IL KR+ LPV++  ++ L  +  NQ +++ GETGSGKTTQIPQF++DA        R  + V CTQPRRVAAMS+++RV+EEMDVT+GEEVGY+IRFEDCSG +TVLK+LTDGMLLREAM DP+L++YKVI+LDEAHERTLATDVL GLLK+VL+ RPD+K+VVMSATL+AEKFQ+YF  APL++VPGR+  VE+FYT EPERDY++AAIRT +QIH+CE PGDILVFLTGEEEIEDACRKI  E +N     G + V PLYS+LPP  QQKIF  AP P     PPGRK+VVSTNIAETSLTIDGIVYV+DPGFSKQK+YNPR+RVESLLVSPIS+ASA QRSGRAGRTRPGKCFRLYTEKSFQ DLQ QTYPEILRS ++N VLTL KLG++DLVHFDFMDPPAPETL RALE LNYLGA+ DEG +T++G  MSE PLDPQ AKM++ +P+F CSNEIL+I +MLS+P  F+RP+EA K ADEAKA+F H+DGDHLTLLN YHAYKQ+    +WC++NFIN R++ SA+NVR QL R++ R  + L S DFN+ DYY  I+KA+ AG +MQVAHL++TG YLTVKD+Q+V +HPS+ LD KP WV+Y ++VLTS+N+IRTVT ++ EWL+++APHYYDL NFP  E K  LE   K+
Sbjct:    1 MGTERKRKVSLFDVVDEPSVKMAKPNGGDVGSSLINKWTGRPYTPKYFEILEKRKTLPVWQQKEEFLQVLNANQTIILVGETGSGKTTQIPQFVLDAVNVETADKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSGARTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINREVSNIGDQVGPVKVVPLYSTLPPAMQQKIFESAPPPSTEDGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISQASAHQRSGRAGRTRPGKCFRLYTEKSFQNDLQAQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSISAMLSIPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNSEDPNWCYENFINNRALKSADNVRQQLVRIMARYNLKLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIKGEWLVDVAPHYYDLTNFPNCEAKRVLEKLYKK 709          
BLAST of EWM30580.1 vs. NCBI_GenBank
Match: gi|1190987736|ref|XP_020882224.1| (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 991.104 bits (2561), Expect = 0.000e+0
Identity = 466/715 (65.17%), Postives = 570/715 (79.72%), Query Frame = 0
Query:   18 MGQTRKQRIDLADL-----------RPGGSGNGGIAPVGGINPYTNRPYSSKYHDILAKRRGLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFLVDA-----GYTRDGYCVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIRDESANYTSTHGELAVYPLYSSLPPTQQQKIFSEAPGPQAPGAPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVEDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHRMSELPLDPQAAKMVLSAPDFGCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQHGGSKDWCWDNFINVRSMGSAENVRTQLERMLTRMEVPLLSPDFNAPDYYTRIKKALTAGGYMQVAHLQKTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTVTAVECEWLLEIAPHYYDLANFPKGETKNELEACAKR 716
            MG  RK++I L D+           +  G  +GGI  +  IN +  +PYS +Y+DIL KRR LPV+   ++ L  +  NQ +++ GETGSGKTTQIPQF++DA        R  + V CTQPRRVAAMS+++RV+EEMDVT+GEEVGY+IRFEDCS P+TVLK+LTDGMLLREAM DP+L++YKVI+LDEAHERTLATDVL GLLK+VL+ RPD+K+VVMSATL+AEKFQ YF  APL++VPGR+  VE+FYT EPERDY++AAIRT +QIH+CE PGDILVFLTGEEEIEDACRKI  E  N     G + V PLYS+LPP  QQKIF  AP P   G PPGRK+VVSTNIAETSLTIDGIVYV+DPGF+KQK+YNPR+RVESLLVSPIS+ASA QRSGRAGRTRPGKCFRLYTEKSF  DLQ QTYPEILRS ++N VLTL KLG++DLVHFDFMDPPAPETL RALE LNYLGA+ DEG +T+ G  MSE PLDPQ AKM++ +P+F CSNEIL++ +MLSVP  F+RP+EA K ADEAKA+F H+DGDHLTLLN YHA+KQH    +WC++NFIN R+M SA+NVR QL R+++R  + + S DFN+ DYY  I+KA+ AG +MQVAHL++TG YLTVKD+Q+V +HPS+ LD KP WV+Y ++VLTS+N+IRTVT +  EWL+++A HYYDL+NFP  E K  +E   K+
Sbjct:    1 MGTERKRKISLFDVMDDPSAAAKNTKISGLADGGINSL--INKWNGKPYSQRYYDILEKRRTLPVWLQKEEFLKTLNSNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREAQKAADEAKARFGHIDGDHLTLLNVYHAFKQHNEDPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKRVIEKLYKK 713          
BLAST of EWM30580.1 vs. NCBI_GenBank
Match: gi|1072962157|ref|XP_018492060.1| (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [Raphanus sativus] >gi|1072962159|ref|XP_018492061.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [Raphanus sativus] >gi|1072962161|ref|XP_018492062.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X2 [Raphanus sativus])

HSP 1 Score: 988.793 bits (2555), Expect = 0.000e+0
Identity = 461/709 (65.02%), Postives = 569/709 (80.25%), Query Frame = 0
Query:   18 MGQTRKQRIDLADLRPGGSGNGGIAPV-----GGINPYTNRPYSSKYHDILAKRRGLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFLVDA-----GYTRDGYCVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIRDESANYTSTHGELAVYPLYSSLPPTQQQKIFSEAPGPQAPGAPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVEDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHRMSELPLDPQAAKMVLSAPDFGCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQHGGSKDWCWDNFINVRSMGSAENVRTQLERMLTRMEVPLLSPDFNAPDYYTRIKKALTAGGYMQVAHLQKTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTVTAVECEWLLEIAPHYYDLANFPKGETKNELEACAKR 716
            MG  RK++I L D+    S    ++       GGIN +  +PYS+KY++IL KRR LPV+   ++ L  +K NQ +++ GETGSGKTTQIPQF++DA      +    + V CTQPRRVAAMS+++RV++EMDV +GEEVGY+IRFEDCS P+TVLK+LTDGMLLREAM DP+L++YKVI+LDEAHERTLATDVL GLLK+VL  RPD+K+VVMSATL+AEKFQ+YF  APL++VPGR+  VE+FYT EPERDY++AAIRT +QIH+CE PGDILVFLTGEEEIEDACRKI  E  N     G + V PLYS+LPP  QQKIF  AP P   G PPGRK+VVSTNIAETSLTIDGIVYV+DPGF+KQK+YNPR+RVESLLVSPIS+ASA QRSGRAGRTRPGKCFRLYTEKSF  DLQ QTYPEILRS ++N VLTL KLG+ DLVHFDFMDPPAPETL RALE LNYLGA+ D+G +T+ G  MSE PLDPQ AKM++ +P+F CSNEIL++ +MLSVP  F+RP+E  K+ADEAKA+F H+DGDHLTLLN YHA+KQH    +WC++N+IN R+M SA+NVR QL R+++R  + + S DFN+ DYYT I+KA+ +G +MQVAHL++TG YLTVKD+Q+V +HPS+ LD KP WV+Y ++VLT++N+IRTVT +  EWL+++APHYYDL NFP  E K  LE   K+
Sbjct:    1 MGTERKRKISLFDVMDDPSAPSKVSKFNGLGDGGINKWNGKPYSAKYYEILEKRRTLPVWLQKEEFLKTLKDNQTLILVGETGSGKTTQIPQFVIDAVDAEFSHKHKKWLVGCTQPRRVAAMSVSRRVADEMDVAIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLGNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGINDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTRTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFLRPRETQKQADEAKARFGHIDGDHLTLLNVYHAFKQHNEDPNWCYENYINTRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYTNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAPHYYDLINFPNCEAKRVLEKLYKK 709          
BLAST of EWM30580.1 vs. NCBI_GenBank
Match: gi|922553761|ref|XP_013604902.1| (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase [Brassica oleracea var. oleracea])

HSP 1 Score: 987.252 bits (2551), Expect = 0.000e+0
Identity = 463/707 (65.49%), Postives = 572/707 (80.91%), Query Frame = 0
Query:   18 MGQTRKQRIDLADLR-----PGGSGNGGIAPVGGINPYTNRPYSSKYHDILAKRRGLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFL---VDAGYTRDGYCVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIRDESANYTSTHGELAVYPLYSSLPPTQQQKIFSEAPGPQAPGAPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVEDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHRMSELPLDPQAAKMVLSAPDFGCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQHGGSKDWCWDNFINVRSMGSAENVRTQLERMLTRMEVPLLSPDFNAPDYYTRIKKALTAGGYMQVAHLQKTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTVTAVECEWLLEIAPHYYDLANFPKGETKNELEACAKR 716
            MG  RK+++ L D+      P  +   G+  VG IN +  +PYS+KY++IL KRR LPV+   ++ L+ +K NQ +++ GETGSGKTTQIPQF+   VDA  +   + VACTQPRRVAAMS+++RV++EMDV +GEEVGY+IRFEDCS P+TVLK+LTDGMLLREAM DP+L++YKVI+LDEAHERTLATDVL GLLK+VL+ RPD+K+VVMSATL+AEKFQ+YF  APL++VPGR+  VE+FYT EPERDY++AAIRT +QIH+CE PGDILVFLTGEEEIEDACRKI  E  N     G + V PLYS+LPP  QQKIF  AP P   G PPGRK+VVSTNIAETSLTIDGIVYV+DPGF+KQK+YNPR+RVESLLVSPIS+ASA QRSGRAGRTRPGKCFRLYTEKSF  DLQ QTYPEILRS ++N VLTL KLG++DLVHFDFMDPPAPETL RALE LNYLGA+ DEG +T+ G  MSE PLDPQ AKM++ +P+F CSNEIL++ +MLSVP  F+RP+E  K ADEAKA+FAH+DGDHLTLLN YHA+KQ+    +WC++N+IN R+M SA+NVR QL R+++R  + + S DFN+ DYY  I+KA+ AG +MQVAHL++ G YLTVKD+Q+V +HPS+ LD KP WV+Y ++VLT++N+IRTVT +  EWL+++APHYYDL NFP  E K  LE   K+
Sbjct:    1 MGTERKRKVTLFDVMDNPSAPKVAKFNGLGDVG-INKWNGKPYSAKYYEILEKRRTLPVWLQKEEFLSTLKNNQTIILVGETGSGKTTQIPQFVIDAVDAESSDRKWLVACTQPRRVAAMSVSRRVADEMDVAIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPEPVTKGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTRTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFLRPREYQKAADEAKAKFAHIDGDHLTLLNVYHAFKQNNEDPNWCYENYINNRAMKSADNVRQQLVRIMSRFNLKICSTDFNSRDYYINIRKAMLAGYFMQVAHLERAGSYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAPHYYDLTNFPNCEAKRVLEKLYKK 706          
The following BLAST results are available for this feature:
BLAST of EWM30580.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113247|gb|EWM30580.1|0.000e+0100.00Helicase-associated domain protein [Nannochloropsi... [more]
gi|298712520|emb|CBJ26788.1|0.000e+075.96conserved unknown protein [Ectocarpus siliculosus][more]
gi|552848928|ref|XP_005852221.1|0.000e+067.04hypothetical protein CHLNCDRAFT_33628 [Chlorella v... [more]
gi|1026776313|gb|OAE35059.1|0.000e+066.67hypothetical protein AXG93_3253s1250 [Marchantia p... [more]
gi|168065858|ref|XP_001784863.1|0.000e+066.67predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|168005694|ref|XP_001755545.1|0.000e+066.62predicted protein [Physcomitrella patens] >gi|1680... [more]
gi|729448747|ref|XP_010522836.1|0.000e+066.01PREDICTED: probable pre-mRNA-splicing factor ATP-d... [more]
gi|1190987736|ref|XP_020882224.1|0.000e+065.17probable pre-mRNA-splicing factor ATP-dependent RN... [more]
gi|1072962157|ref|XP_018492060.1|0.000e+065.02PREDICTED: probable pre-mRNA-splicing factor ATP-d... [more]
gi|922553761|ref|XP_013604902.1|0.000e+065.49PREDICTED: probable pre-mRNA-splicing factor ATP-d... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna101rna101Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications