EWM20609.1, cds10064 (CDS) Nannochloropsis gaditana

Overview
NameEWM20609.1
Unique Namecds10064
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037262.1:34032..34343 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20609.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101926g1.2733.mrna
GbkeyCDS
End range.
End range34343
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037262.1supercontigKK037262.1:34032..34343 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20609.1 vs. NCBI_GenBank
Match: gi|585100371|gb|EWM20609.1| (hypothetical protein Naga_101926g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 211.846 bits (538), Expect = 1.442e-69
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 
Query:    1 PTSLDVHLVFFPLIFHAPAPCPPWRPLSPAGFFRSSRHFLGHCWSRTVGSCLCPAGGFSLEEEGSPCKHGREREVPLVRRKTGEKTENKKHKDMEILLITGND 103
            PTSLDVHLVFFPLIFHAPAPCPPWRPLSPAGFFRSSRHFLGHCWSRTVGSCLCPAGGFSLEEEGSPCKHGREREVPLVRRKTGEKTENKKHKDMEILLITGND
Sbjct:    1 PTSLDVHLVFFPLIFHAPAPCPPWRPLSPAGFFRSSRHFLGHCWSRTVGSCLCPAGGFSLEEEGSPCKHGREREVPLVRRKTGEKTENKKHKDMEILLITGND 103
The following BLAST results are available for this feature:
BLAST of EWM20609.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100371|gb|EWM20609.1|1.442e-69100.00hypothetical protein Naga_101926g1, partial [Nanno... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10095rna10095Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications