EWM20623.1, cds10050 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20623.1 vs. NCBI_GenBank
Match: gi|585100398|gb|EWM20623.1| (hypothetical protein Naga_101524g1 [Nannochloropsis gaditana]) HSP 1 Score: 252.292 bits (643), Expect = 6.818e-85 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 Query: 1 MGEDDLLLGRDDCIPTVLTVSNGCALNMFPIDVCVPEWEVESVILGCPKEKPNDLVFMQSACLETLLKRYGWANKKTTQCLPDFSISPFGFGLVKTLCGGVKLCQLIWRDLKILILEGQNMKFN 124 MGEDDLLLGRDDCIPTVLTVSNGCALNMFPIDVCVPEWEVESVILGCPKEKPNDLVFMQSACLETLLKRYGWANKKTTQCLPDFSISPFGFGLVKTLCGGVKLCQLIWRDLKILILEGQNMKFN Sbjct: 1 MGEDDLLLGRDDCIPTVLTVSNGCALNMFPIDVCVPEWEVESVILGCPKEKPNDLVFMQSACLETLLKRYGWANKKTTQCLPDFSISPFGFGLVKTLCGGVKLCQLIWRDLKILILEGQNMKFN 124
BLAST of EWM20623.1 vs. NCBI_GenBank
Match: gi|553180048|ref|XP_005853322.1| (hypothetical protein NGA_0718300 [Nannochloropsis gaditana CCMP526] >gi|422295724|gb|EKU23023.1| hypothetical protein NGA_0718300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 247.669 bits (631), Expect = 3.748e-83 Identity = 121/124 (97.58%), Postives = 123/124 (99.19%), Query Frame = 0 Query: 1 MGEDDLLLGRDDCIPTVLTVSNGCALNMFPIDVCVPEWEVESVILGCPKEKPNDLVFMQSACLETLLKRYGWANKKTTQCLPDFSISPFGFGLVKTLCGGVKLCQLIWRDLKILILEGQNMKFN 124 MG DDLLLGRDDC+PTVLTVSNGCALNMFPIDVCVPEWEVESVILGCPKEKPNDLVFMQSACLETLLKRYGWANKKTTQCLPDFSISPFGFGLV+TLCGGVKLCQLIWRDLKILILEGQNMKFN Sbjct: 1 MGVDDLLLGRDDCLPTVLTVSNGCALNMFPIDVCVPEWEVESVILGCPKEKPNDLVFMQSACLETLLKRYGWANKKTTQCLPDFSISPFGFGLVRTLCGGVKLCQLIWRDLKILILEGQNMKFN 124
BLAST of EWM20623.1 vs. NCBI_GenBank
Match: gi|585108501|gb|EWM26454.1| (hypothetical protein Naga_100144g13 [Nannochloropsis gaditana]) HSP 1 Score: 186.037 bits (471), Expect = 3.817e-55 Identity = 85/91 (93.41%), Postives = 85/91 (93.41%), Query Frame = 0 Query: 1 MGEDDLLLGRDDCIPTVLTVSNGCALNMFPIDVCVPEWEVESVILGCPKEKPNDLVFMQSACLETLLKRYGWANKKTTQCLPDFSISPFGF 91 MGEDDLLLGRDDCIPTVLTVSNGC LNMFPI VCVPEWEVESVILGCPKEK NDLVFMQSACLETLLKRYG ANKKTTQCLP FSISPFG Sbjct: 123 MGEDDLLLGRDDCIPTVLTVSNGCTLNMFPIYVCVPEWEVESVILGCPKEKRNDLVFMQSACLETLLKRYGLANKKTTQCLPYFSISPFGL 213
BLAST of EWM20623.1 vs. NCBI_GenBank
Match: gi|299117349|emb|CBN75305.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 76.2554 bits (186), Expect = 5.872e-14 Identity = 47/104 (45.19%), Postives = 57/104 (54.81%), Query Frame = 0 Query: 1 MGEDDLLLGRDDCIPTVLTVSNG-------CALNMFPIDVCVPEWEVESVILGCPKEKPNDLVFMQSACLETLLKRYGWANKKTTQCLPDFSISPFGFGLVKTL 97 MGED ++LGR + IP L S+G L FPI VCVPE EV +VI CP +K +DLVFM S CLE LLK G + TQ FS+ G V + Sbjct: 47 MGED-VVLGRGEAIPDSLPCSSGKGEDGEPAMLQNFPIYVCVPEEEVAAVIDSCPDDKKDDLVFMSSGCLEPLLKSRGMCRGEQTQATLYFSVDKVGGRAVDAM 149
BLAST of EWM20623.1 vs. NCBI_GenBank
Match: gi|551669787|ref|XP_005837652.1| (hypothetical protein GUITHDRAFT_151218 [Guillardia theta CCMP2712] >gi|428181809|gb|EKX50672.1| hypothetical protein GUITHDRAFT_151218 [Guillardia theta CCMP2712]) HSP 1 Score: 69.707 bits (169), Expect = 1.485e-11 Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 0 Query: 2 GEDDLLLGRDDCIPTVLTVSNGCALNMFPIDVCVPEWEVESVILGCPKEKPNDLVFMQSACLETLLKRYGWANKKTTQCLPDFSI 86 G DD+++GR IP V L FP+ VCVP E+E+VI CP+ K +DLVF+Q +E +LK+Y + TQ LP F++ Sbjct: 91 GGDDVVVGRGGQIPEVHE-----GLESFPVYVCVPTSELENVIRSCPQSKLDDLVFVQDGMIEPILKKYALCGNENTQMLPYFTL 170
BLAST of EWM20623.1 vs. NCBI_GenBank
Match: gi|553180283|ref|XP_005853379.1| (hypothetical protein NGA_0116102 [Nannochloropsis gaditana CCMP526] >gi|553191635|ref|XP_005855420.1| hypothetical protein NGA_0116101 [Nannochloropsis gaditana CCMP526] >gi|422293651|gb|EKU20951.1| hypothetical protein NGA_0116101 [Nannochloropsis gaditana CCMP526] >gi|422295684|gb|EKU22983.1| hypothetical protein NGA_0116102 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 66.2402 bits (160), Expect = 9.547e-11 Identity = 31/34 (91.18%), Postives = 31/34 (91.18%), Query Frame = 0 Query: 58 MQSACLETLLKRYGWANKKTTQCLPDFSISPFGF 91 MQSACLETLLKRYG ANKKTTQCLP FSISPFG Sbjct: 1 MQSACLETLLKRYGLANKKTTQCLPYFSISPFGL 34 The following BLAST results are available for this feature:
BLAST of EWM20623.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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