EWM20647.1, cds10026 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20647.1 vs. NCBI_GenBank
Match: gi|585100446|gb|EWM20647.1| (hypothetical protein Naga_100289g4 [Nannochloropsis gaditana]) HSP 1 Score: 408.297 bits (1048), Expect = 3.667e-144 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 Query: 1 MDSSLAVSSTFPRFSFLRTVTKREARQIFEQFPFMKTTNVWKRFIETGEAADEDAAAAAMVEAVREMGATLIEARSITKDADTVVQHANDFLDDLKANDASSPELVASAKRGSPRAIATLQQKFVDQYLGGIDLETFQNPQWVDRARDNFFADENLLRAVGDESVLSNLRNPNLRPLKVSEYEEADPARILSSLTGNQAPS 201 MDSSLAVSSTFPRFSFLRTVTKREARQIFEQFPFMKTTNVWKRFIETGEAADEDAAAAAMVEAVREMGATLIEARSITKDADTVVQHANDFLDDLKANDASSPELVASAKRGSPRAIATLQQKFVDQYLGGIDLETFQNPQWVDRARDNFFADENLLRAVGDESVLSNLRNPNLRPLKVSEYEEADPARILSSLTGNQAPS Sbjct: 1 MDSSLAVSSTFPRFSFLRTVTKREARQIFEQFPFMKTTNVWKRFIETGEAADEDAAAAAMVEAVREMGATLIEARSITKDADTVVQHANDFLDDLKANDASSPELVASAKRGSPRAIATLQQKFVDQYLGGIDLETFQNPQWVDRARDNFFADENLLRAVGDESVLSNLRNPNLRPLKVSEYEEADPARILSSLTGNQAPS 201
BLAST of EWM20647.1 vs. NCBI_GenBank
Match: gi|553185284|ref|XP_005854226.1| (hypothetical protein NGA_0223401 [Nannochloropsis gaditana CCMP526] >gi|553189756|ref|XP_005855066.1| hypothetical protein NGA_0223402 [Nannochloropsis gaditana CCMP526] >gi|422293989|gb|EKU21289.1| hypothetical protein NGA_0223402 [Nannochloropsis gaditana CCMP526] >gi|422294833|gb|EKU22133.1| hypothetical protein NGA_0223401 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 359.377 bits (921), Expect = 2.075e-123 Identity = 179/183 (97.81%), Postives = 179/183 (97.81%), Query Frame = 0 Query: 19 TVTKREARQIFEQFPFMKTTNVWKRFIETGEAADEDAAAAAMVEAVREMGATLIEARSITKDADTVVQHANDFLDDLKANDASSPELVASAKRGSPRAIATLQQKFVDQYLGGIDLETFQNPQWVDRARDNFFADENLLRAVGDESVLSNLRNPNLRPLKVSEYEEADPARILSSLTGNQAPS 201 TVTKREARQIFEQFPFMKTTNVWKRFIETGE ADEDAAAAAMVEAVREMGATLIEARSITKDADTVVQHANDFLDDLKANDASSPELVASAKRGSPRAIATLQQKFVDQYLGGIDLETF QWVDRARDNFFADENLLRAVGDESVLSNLRNPNLRPLKVSEYEEADPARILSSLTGNQAPS Sbjct: 117 TVTKREARQIFEQFPFMKTTNVWKRFIETGEVADEDAAAAAMVEAVREMGATLIEARSITKDADTVVQHANDFLDDLKANDASSPELVASAKRGSPRAIATLQQKFVDQYLGGIDLETF---QWVDRARDNFFADENLLRAVGDESVLSNLRNPNLRPLKVSEYEEADPARILSSLTGNQAPS 296
BLAST of EWM20647.1 vs. NCBI_GenBank
Match: gi|585110849|gb|EWM28447.1| (hypothetical protein Naga_100627g1 [Nannochloropsis gaditana]) HSP 1 Score: 119.013 bits (297), Expect = 4.465e-31 Identity = 56/105 (53.33%), Postives = 77/105 (73.33%), Query Frame = 0 Query: 95 LKANDASSPELVASAKRGSPRAIATLQQKFVDQYLGGIDLETFQNPQWVDRARDNFFADENLLRAVGDESVLSNLRNPNLRPLKVSEYEEADPARILSSLTGNQA 199 LKAND S+P L + + G PRA+ATLQQ F D+YLGG+DL+ FQ+ +W+++AR FFA+E+LLR V D +L LRNP+L+ K SE ADP+R+L+SL + A Sbjct: 3 LKANDPSAPRLFDAVREGDPRAVATLQQMFADRYLGGVDLDAFQDNEWIEKARARFFANEDLLRLVDDNDILDILRNPDLKLHKASEMGNADPSRLLNSLMESHA 107
BLAST of EWM20647.1 vs. NCBI_GenBank
Match: gi|585110847|gb|EWM28446.1| (hypothetical protein Naga_100591g1 [Nannochloropsis gaditana]) HSP 1 Score: 78.5666 bits (192), Expect = 1.228e-14 Identity = 38/76 (50.00%), Postives = 52/76 (68.42%), Query Frame = 0 Query: 16 FLRTVTKREARQIFEQFPFMKTTNVWKRFIETGEAADEDAAAAAMVEAVREMGATLIEARSITKDADTVVQHANDF 91 L +VTK EA IFE F MKTT WK F E+G+ DE+A A+AM+++V+EMG ++ AR TKDAD+V ++F Sbjct: 111 MLESVTKDEAGLIFENFKVMKTTKAWKAFQESGDTEDEEAVASAMIKSVQEMGQIMLGARYFTKDADSVTAVTDEF 186 The following BLAST results are available for this feature:
BLAST of EWM20647.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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