EWM30673.1, cds10 (CDS) Nannochloropsis gaditana

Overview
NameEWM30673.1
Unique Namecds10
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:29933..30010 -
Alignment locationCM002455.1:29776..29836 -
Alignment locationCM002455.1:29602..29647 -
Alignment locationCM002455.1:29364..29457 -
Alignment locationCM002455.1:29170..29264 -
Alignment locationCM002455.1:28932..29010 -
Alignment locationCM002455.1:28733..28828 -
Alignment locationCM002455.1:28517..28606 -
Alignment locationCM002455.1:28305..28370 -
Alignment locationCM002455.1:28079..28210 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30673.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100091g6.5722.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:29933..30010 -
CM002455.1supercontigCM002455.1:29776..29836 -
CM002455.1supercontigCM002455.1:29602..29647 -
CM002455.1supercontigCM002455.1:29364..29457 -
CM002455.1supercontigCM002455.1:29170..29264 -
CM002455.1supercontigCM002455.1:28932..29010 -
CM002455.1supercontigCM002455.1:28733..28828 -
CM002455.1supercontigCM002455.1:28517..28606 -
CM002455.1supercontigCM002455.1:28305..28370 -
CM002455.1supercontigCM002455.1:28079..28210 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM30673.1 vs. NCBI_GenBank
Match: gi|585113369|gb|EWM30673.1| (hypothetical protein Naga_100091g6 [Nannochloropsis gaditana])

HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0 
Query:    1 MCTRLSYSGRLLLLLLSCLLLIVQAQWGMKKVKKEDGAVRPEDVQGGLSFDDMQKIAKHSGGKEELNPFDMLKAMDLDIGDLDMKSVVEEAMNSPEIQAMMDDPVLLKKALRESPLFENLPGLEKILEKPEFDDPEKLKELFQKGMDEFKEVSDTILDMVDDEGKREEVMAELLKNLDPSEQRKMKALLAGEDDAIEEAAANLAEIFAGMGNELKRSLDDPEKMENARKNFLENEEWLNTFEDPDLRAAASDPDKWKDIMRENARLMYGSADEKNDEL 278
            MCTRLSYSGRLLLLLLSCLLLIVQAQWGMKKVKKEDGAVRPEDVQGGLSFDDMQKIAKHSGGKEELNPFDMLKAMDLDIGDLDMKSVVEEAMNSPEIQAMMDDPVLLKKALRESPLFENLPGLEKILEKPEFDDPEKLKELFQKGMDEFKEVSDTILDMVDDEGKREEVMAELLKNLDPSEQRKMKALLAGEDDAIEEAAANLAEIFAGMGNELKRSLDDPEKMENARKNFLENEEWLNTFEDPDLRAAASDPDKWKDIMRENARLMYGSADEKNDEL
Sbjct:    1 MCTRLSYSGRLLLLLLSCLLLIVQAQWGMKKVKKEDGAVRPEDVQGGLSFDDMQKIAKHSGGKEELNPFDMLKAMDLDIGDLDMKSVVEEAMNSPEIQAMMDDPVLLKKALRESPLFENLPGLEKILEKPEFDDPEKLKELFQKGMDEFKEVSDTILDMVDDEGKREEVMAELLKNLDPSEQRKMKALLAGEDDAIEEAAANLAEIFAGMGNELKRSLDDPEKMENARKNFLENEEWLNTFEDPDLRAAASDPDKWKDIMRENARLMYGSADEKNDEL 278
The following BLAST results are available for this feature:
BLAST of EWM30673.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113369|gb|EWM30673.1|0.000e+0100.00hypothetical protein Naga_100091g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10rna10Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications