EWM22124.1, cds8555 (CDS) Nannochloropsis gaditana

Overview
NameEWM22124.1
Unique Namecds8555
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:331104..331430 +
Alignment locationKK037249.1:331617..331670 +
Alignment locationKK037249.1:331848..331904 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22124.1
Productcystatin b
Orig transcript idgnl|cribi|Naga_100060g13.5492.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:331104..331430 +
KK037249.1supercontigKK037249.1:331617..331670 +
KK037249.1supercontigKK037249.1:331848..331904 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0019538protein metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030234enzyme regulator activity
Homology
[Close]
BLAST of EWM22124.1 vs. NCBI_GenBank
Match: gi|585102544|gb|EWM22124.1| (cystatin b [Nannochloropsis gaditana])

HSP 1 Score: 299.286 bits (765), Expect = 6.629e-103
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 
Query:    1 MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLPLIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVRAQIIGARWMWGMGILFM 145
            MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLPLIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVRAQIIGARWMWGMGILFM
Sbjct:    1 MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLPLIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVRAQIIGARWMWGMGILFM 145
[Close]
BLAST of EWM22124.1 vs. NCBI_GenBank
Match: gi|585102543|gb|EWM22123.1| (cystatin b [Nannochloropsis gaditana])

HSP 1 Score: 264.233 bits (674), Expect = 1.889e-88
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0 
Query:    1 MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLPLIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVRA 129
            MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLPLIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQV A
Sbjct:    1 MMMHACHASFVLLVLSVRHWRPCLVPPSAGFNQQTAALSGSIFSPLSVLPLIEYQLTQINYIIGFLNRWRVMSGDAPTAGLIGGFGSASPAADPEVTALLTKMKPEVEKHLATTFKMFAPHTLRTQVVA 129
The following BLAST results are available for this feature:
BLAST of EWM22124.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102544|gb|EWM22124.1|6.629e-103100.00cystatin b [Nannochloropsis gaditana][more]
gi|585102543|gb|EWM22123.1|1.889e-8899.22cystatin b [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8582rna8582Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications