NO03G00620.2, NO03G00620.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO03G00620.2
Unique NameNO03G00620.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length867
Alignment locationchr3:197538..198889 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:197538..198889 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G00620.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00620NO03G00620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO03G00620.2NO03G00620.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO03G00620.2.cds1NO03G00620.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G00620.2.cds2NO03G00620.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G00620.2.cds3NO03G00620.2.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G00620.2.cds4NO03G00620.2.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO03G00620.2 ID=NO03G00620.2|Name=NO03G00620.2|organism=Nannochloropsis oceanica|type=mRNA|length=867bp
ATGCGAAGCGGCAGCGGGTGGGAGAAAGGGAGGGAGGGGAGGAGGGGGGG
GGGAGGAAGAGGGTGTGGCAGGAGAGGGGCAAGTGCCGACGGTGCTGGAC
ACGACGCAACTGCAGAACTCCCTCTTCCTCATGCTTCAGGGCGGGGAGGC
CTCGCGGGCGAGTGCTCGGCATCAACTGCTGCGACTCGTCTGTCAAGCTG
TGGAGAAGGCGGAAGACGGTCAAACAGCCTACTACAGGCGAACGGTGCAA
TACCTCCATCACTTCCGCGCCGCCCTCGACCAGGCCAAACGCCCCGCGAG
CGAATGGAACACTCTCCTCCGCAGTTTGAAGGAGGGCCCGGGGGAGGGAG
GGAGGGAGGGGGGAATGAGTTCTGGCGAGGAGTCCAAGAGGCAGGGTTGA
CACTGTGTGAGGTAAGTAAGACGAGAGAGGAGGGAGGGAAGGAGGGAGGG
CGGGCTTGGTGACTTGCGGCTGATGCACCTTATTTCCTGTGTTCAGGTGG
ATGAGGCGGAGGCGCGGGCTTTCCTTGAGGAGGAAGATGTAAGGAAGGAG
GAGGTCGTGGCGGTGACAGGGGAGGGGGACGAGGGGGAGCAGCGTGAGGG
GGAGGAAGAGGAGGAGTTGGAGATTGAGTAGGGTGGGGAACAAGGGGAGG
AAGGGAAGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGA
GGTCGTGGAGAGTGGAAGCAATGCAAACACATGTGAACATATACGTATCT
ATAATCCCAAGAGAGGGTTAGACGTTACAGTAACGCCAGGACGAGGGCCA
GGAGGAAGCGCACAGTACACAAACGACAAAACGATTCATTCAAACCAAAA
GATCAACGATGATGGCT
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protein sequence of NO03G00620.2

>NO03G00620.2-protein ID=NO03G00620.2-protein|Name=NO03G00620.2|organism=Nannochloropsis oceanica|type=polypeptide|length=154bp
MRSGSGWEKGREGRRGGGGRGCGRRGASADGAGHDATAELPLPHASGRGG
LAGECSASTAATRLSSCGEGGRRSNSLLQANGAIPPSLPRRPRPGQTPRE
RMEHSPPQFEGGPGGGREGGGNEFWRGVQEAGLTLCEVSKTREEGGKEGG
RAW*
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mRNA from alignment at chr3:197538..198889+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO03G00620.2 ID=NO03G00620.2|Name=NO03G00620.2|organism=Nannochloropsis oceanica|type=mRNA|length=1352bp|location=Sequence derived from alignment at chr3:197538..198889+ (Nannochloropsis oceanica)
ATGCGAAGCGGCAGCGGGTGGGAGAAAGGGAGGGAGGGGAGGAGGGGGGG
GGGAGGAAGAGGGTGTGGCAGGAGAGGGGCAAGTGCCGACGGTGCTGGAC
ACGACGCAACTGCAGAGTACGTGTGGAAGGGGGGTTGGGGAGGAGAGAGA
GAGGGAGGGAGGGAGGGAAGGAGGGGGTACTTAGGGTGTTGTGCTGCCTA
CTTACATGAGAGCCAGATCCTGAGACACAATAGAGACATCTCTACCTATG
CACACGTCCACACACCCACACGACCCCACAGACTCCCTCTTCCTCATGCT
TCAGGGCGGGGAGGCCTCGCGGGCGAGTGCTCGGCATCAACTGCTGCGAC
TCGTCTGTCAAGCTGTGGAGAAGTAGGTGCAAGGGAGGGAGGGAGGGAGG
GAGGGGAGAGGGGATGGAAGGACATACAAATCCGAACGAGACCATCGATA
CACATTCACCTCGTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCC
TCAAGGGCGGAAGACGGTCAAACAGCCTACTACAGGCGAACGGTGCAATA
CCTCCATCACTTCCGCGCCGCCCTCGACCAGGCCAAACGGTAGGTTCCTT
CCCTCCCTCATCCCCCTCCTCCCTTCCTCCCCCTCCCTGCCTCCCTGCCT
CCCTTCCTCCCTACCTCTCCTCGTTTTTCCTTTCATTTGTCATCCATCTT
TCCCTGGGGTTGTACTTGCCGTCTCGCACTAAGACCTCCTTCCTTCCATC
CCTCTTTCCCTCGCTTGTCTTTCCAGCCCCGCGAGCGAATGGAACACTCT
CCTCCGCAGTTTGAAGGAGGGCCCGGGGGAGGGAGGGAGGGAGGGGGGAA
TGAGTTCTGGCGAGGAGTCCAAGAGGCAGGGTTGACACTGTGTGAGGTAA
GTAAGACGAGAGAGGAGGGAGGGAAGGAGGGAGGGCGGGCTTGGTGACTT
GCGGCTGATGCACCTTATTTCCTGTGTTCAGGTGGATGAGGCGGAGGCGC
GGGCTTTCCTTGAGGAGGAAGATGTAAGGAAGGAGGAGGTCGTGGCGGTG
ACAGGGGAGGGGGACGAGGGGGAGCAGCGTGAGGGGGAGGAAGAGGAGGA
GTTGGAGATTGAGTAGGGTGGGGAACAAGGGGAGGAAGGGAAGGAGGGAG
GGAAGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGGTCGTGGAGAGTGG
AAGCAATGCAAACACATGTGAACATATACGTATCTATAATCCCAAGAGAG
GGTTAGACGTTACAGTAACGCCAGGACGAGGGCCAGGAGGAAGCGCACAG
TACACAAACGACAAAACGATTCATTCAAACCAAAAGATCAACGATGATGG
CT
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Coding sequence (CDS) from alignment at chr3:197538..198889+

>NO03G00620.2 ID=NO03G00620.2|Name=NO03G00620.2|organism=Nannochloropsis oceanica|type=CDS|length=462bp|location=Sequence derived from alignment at chr3:197538..198889+ (Nannochloropsis oceanica)
ATGCGAAGCGGCAGCGGGTGGGAGAAAGGGAGGGAGGGGAGGAGGGGGGG
GGGAGGAAGAGGGTGTGGCAGGAGAGGGGCAAGTGCCGACGGTGCTGGAC
ACGACGCAACTGCAGAACTCCCTCTTCCTCATGCTTCAGGGCGGGGAGGC
CTCGCGGGCGAGTGCTCGGCATCAACTGCTGCGACTCGTCTGTCAAGCTG
TGGAGAAGGCGGAAGACGGTCAAACAGCCTACTACAGGCGAACGGTGCAA
TACCTCCATCACTTCCGCGCCGCCCTCGACCAGGCCAAACGCCCCGCGAG
CGAATGGAACACTCTCCTCCGCAGTTTGAAGGAGGGCCCGGGGGAGGGAG
GGAGGGAGGGGGGAATGAGTTCTGGCGAGGAGTCCAAGAGGCAGGGTTGA
CACTGTGTGAGGTAAGTAAGACGAGAGAGGAGGGAGGGAAGGAGGGAGGG
CGGGCTTGGTGA
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Synonyms
Publications