NO25G00700.1, NO25G00700.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO25G00700.1
Unique Name	NO25G00700.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4608
Alignment location	chr25:192937..197942 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr25	genome	chr25:192937..197942 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO25G00700.1 vs.
Match: EWM21564.1 (abc transporter g family member 29 [Nannochloropsis gaditana])

HSP 1 Score: 1646.3 bits (4262), Expect = 0.000e+0
Identity = 902/1299 (69.44%), Postives = 1025/1299 (78.91%), Query Frame = 0

Query:  278 MSFVHKLAQQRRTVLATIHQPSPDTFSLASAVVLLSGGRLCYCGPSQKVIEYFQNLNFQFEGFSNPADFALSVVGGSLGPRPPAIGSSSSSSSSSSGGDGGVREGGGGGGREGGSVNGSTSAGTRPWSPRELSTHFKASPGYR------ATISSTTNGSIHHPLPS-RPSSKVSSSSRPSLLRHSHPPSFPTSLPTQCRVLLARAWLTQTRQVDFIRAQVAKNLIVALVCGAIFYGQGAVSPPSDQFNQESFNVSSILFFAMMYTIISNLQAIPQLFAQRVQYVRERSAFLYSTFAFWFANALVNLPLVLASHLLFLNVAYFLVQLDHSPSVFWYTLFITMLNNLISFYFAQFLAAAAPSSQVALAIFPVTFLFLTSFAGFTVPLQDLPSGWVWASYVSYPRWCYEGMVASQFSVRADGASTMEYYGFSDWRPAESFPVLFIFLLLMNGSVYWGLLPKKSQLVYVGGRGRGREKARGEEREERG---SALRATLLLEREEEDEEEDEDEDEDSINDEDGEVDEEAGLRRGRRGGRKGAYHLSSTIADVAGQYRPHSSAASGGTSKGLRQKLLAADEKDLDIPRVLLESLTGTSDTASIDSRLNRGGGR---EGGGGGAWGFQQPYGESGPEEGGGDGGECLDVKDYESRSSNIQKCGGIRLVFRNLTYSL-DRPLAGRRSSRRS----------RSDGAEKEKMLLKGASGRINPGEMCALMGGSGAGKTTLLDVLAGRKTSGYIVGEVYFNGKAGMPNRTRCSYVTQDNVHIGCFTVRETLWFASLLRIKESVGVAERKKRVENVLGMLGLELVADVLVGDTLRKGISGGQARRLTIGVEIINLPGIIFLDEPTTGLDSNISYEVMAAVRNLANQNRTVCCTIHQPSIEVFALFDKLILMAQGEQIYYGTTHEAVKYFSSPALDFMFSKGMNPAEYVMAASSGTLQTRGGRKRDVRELAALYRASELCAQFSDSLDAAVL---GGREGGREEGEAGA--------------GLEGRLFPRDMLQINHILVKRQFLKMRRNRRPVVVGVLRHILVALFYGSLYWQVASTAIQSRLSLLFFAIMFVMVGNQQTIPGVHEDRLLYYREKGAHVYGPFSYWMTCAASYVPQNILNTLLYSAIVYTMSGLHNSFACFGYFYLIIMLCSLCALFFCQLLSITLHSPQTAVAVFPATLFIFSSFAGFIVRLPSLPSWLGTWCPDVSFARWAFQGLVINEFEGNARVSYRDLPAVYYSPDPYQTMVESLGFEGFSKWFTVPILLLNMVVFRGLTYVSLVWVNHERR 1536
            MSFVHKLA+QRRTV+ATIHQPSPDTF+LA+ VVLLSGGRLCYCGPS +V EYFQ L F  EGFSNPADFALSVVGGSLG R   +          + G GG           GGS+ GS   G+RP +PREL+  F+ASP +R      +T ++T   S+H   P   P    S++ R        P SFPT L  QCRVLL R+WLTQTRQ+ FIRAQ+AKNLIVA VCGA+FYGQGAV PPSDQFNQESFNVSSILFFAM+YTI+ NLQAIPQLF QRV YVRERSAFLYSTFA+W ANALVNLPLVL  H++FLNVAY LVQLD SPSVF+YT F+TMLNN+++F FAQFLAA+APS+QVALAIFPVTFLFLTSFAGFTVPLQDLPSGW+WASY+SYPRWCYEG+VASQFSVR DGASTMEYYGF  W P +SF +LFIFLLL NG VYWGLLP++S+LV +  R  G  + +GE++         LRA LL++    D        E  I DED    EE G+ +G R G +GA+ L S++A+VAG       ++  G SKGL+QKLLAAD+KDLDIPRVLLESLTGTSDTA IDSRLN GG R   E G GG   F     +   E+     G  LDV+D+E RSSNI K GGIRL FRNLTYSL  R   G+R S               D    +K LL+ ASGR+NPGEMCALMGGSGAGKTTLLDVLAGRKT+G I GEV+FNGKAGMP+   CSYVTQDNVHIGCFTVRETL FA+LLRIKE V  A+R+K V++VLGMLGL+ VADV+VGD+LRKGISGGQARRLTIGVEIINLPG+IFLDEPTTGLDSNISYEVMAAVRNLANQNRTVCCTIHQPSIEVFALFDKLILMA+GEQ+Y+G THEAVKYFSSPALDF FSKG+NPAE+VM+ASSG++ TRGG KRDV EL+ALYRAS+L  QF+D  DAAVL   GG   G       A               LE RLF RDMLQIN IL++RQFLKMRRNRR VVVG++RH+LVALFYGSLYWQVA TAIQSRLSLLFFAIMFVM+GNQQ+IP V+EDRLLYYREKGAHVYGP+SYWMTCAAS++PQ ILNTLLYS I+Y M+GLH++FACFGYFYL+ MLCSLCALFFCQLLSITL +PQTAVAVFPA+LFIF  FAGFIVRLPSLPSW+G WCPD SFARWAFQGLVINE +GNARVSY+DLPAVYYSP+PYQTM+ +LGF+G+SKWFTVPILLLNMV+FRGLTY+SL+++NHE R
Sbjct:    1 MSFVHKLAKQRRTVIATIHQPSPDTFALATTVVLLSGGRLCYCGPSPEVTEYFQGLGFAAEGFSNPADFALSVVGGSLGTRLVHVPGGGDHEDGRADGSGGT----------GGSLLGSYGGGSRPLTPRELAGRFQASPAFRCITVTGSTSTATKVASVHAFGPGLAPVVDPSAAKR----ERRQPTSFPTGLGNQCRVLLERSWLTQTRQLGFIRAQIAKNLIVASVCGAVFYGQGAVPPPSDQFNQESFNVSSILFFAMLYTIVGNLQAIPQLFTQRVLYVRERSAFLYSTFAYWLANALVNLPLVLLCHVIFLNVAYLLVQLDRSPSVFFYTQFVTMLNNVVAFTFAQFLAASAPSAQVALAIFPVTFLFLTSFAGFTVPLQDLPSGWIWASYISYPRWCYEGIVASQFSVRIDGASTMEYYGFGGWEPGKSFYILFIFLLLFNGLVYWGLLPRRSRLVDMEDR-EGEMREKGEKKGATTCDTKGLRAPLLMD----DMCCSSMAVEGGIRDED----EEEGMGQGGRDGLQGAFPLHSSMANVAGGPDGGPLSSPAGPSKGLKQKLLAADDKDLDIPRVLLESLTGTSDTAFIDSRLNSGGARTSNESGRGGHDSFLSQLQQEDREK-----GSALDVEDFEMRSSNIPKSGGIRLRFRNLTYSLGSRGWHGQRKSESRAGNVPVATPLAKDATGTKKYLLRKASGRVNPGEMCALMGGSGAGKTTLLDVLAGRKTAGLIEGEVFFNGKAGMPSPKLCSYVTQDNVHIGCFTVRETLHFAALLRIKEGVRPAQREKMVDDVLGMLGLDSVADVMVGDSLRKGISGGQARRLTIGVEIINLPGMIFLDEPTTGLDSNISYEVMAAVRNLANQNRTVCCTIHQPSIEVFALFDKLILMAKGEQVYFGATHEAVKYFSSPALDFAFSKGVNPAEFVMSASSGSILTRGGLKRDVHELSALYRASDLFMQFNDDFDAAVLTAPGGLCPGLNSTYGSALAAEKDLTSAPEMSALENRLFFRDMLQINKILIRRQFLKMRRNRRLVVVGLIRHVLVALFYGSLYWQVAPTAIQSRLSLLFFAIMFVMLGNQQSIPAVYEDRLLYYREKGAHVYGPYSYWMTCAASFIPQIILNTLLYSGIMYPMAGLHSNFACFGYFYLVTMLCSLCALFFCQLLSITLPNPQTAVAVFPASLFIFVLFAGFIVRLPSLPSWIGAWCPDASFARWAFQGLVINELDGNARVSYKDLPAVYYSPNPYQTMMSNLGFQGYSKWFTVPILLLNMVLFRGLTYLSLIFINHESR 1271

The following BLAST results are available for this feature:

BLAST of NO25G00700.1 vs.

BLAST of NO25G00700.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM21564.1	0.000e+0	69.44	abc transporter g family member 29 [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO25G00700	NO25G00700	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO25G00700.1	NO25G00700.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO25G00700.1.cds1	NO25G00700.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G00700.1.cds2	NO25G00700.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G00700.1.cds3	NO25G00700.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO25G00700.1.cds4	NO25G00700.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr25:192937..197942+
coding sequence from alignment at chr25:192937..197942+

mRNA sequence

>NO25G00700.1 ID=NO25G00700.1|Name=NO25G00700.1|organism=Nannochloropsis oceanica|type=mRNA|length=4608bp
ATGCACAACGGTACCAGCACGTTTATACTCATGCCAGCATTCGCTTTATC
ACTCACATCCAGGGCTATCAACAATGCCAATGGCTGCTTGCGTGCCAAGG
CCCATTGCTCGTCATCTCATTTTCGCACTATAGTAGCCATGCGCGAGGTG
TCGGCGGCGCCGGCTGATGGCAGGAGCGGCAGCGACGACAAGCGCTTTAT
AGTCAAGCCCCAAGGCCTCGAGGGGGGAGGCACATCCTGGTCGCGTACGG
GTGTCACCGTGTCGGCGCACCATATTAGCTATGCCGTGCCCCCGCCGACG
AAACGGGGTAGAAATCAGAAGAAGAAGCGACCCACTATGTTGTTGCGGGA
TGTATCGATGCAGGTGCAGCCCGGTGAGCTGTGTTATCTCATGGGACCTT
CGGGAGCGGGTAAGACGACTTTGCTCGAAGTCCTTGCGGGGCGCTTGCAA
GTAGGAACGCTACGGGGAGAAGTGCTCTTTAATGGTCAGCCCCGCGATGG
GACTTATTGGCGGGAGAGCTCATATGTGAAGCAGGATGACGTGCATATTG
CCCAACTGACGGTTCAAGAGACTTTGAGGTTTGCGGCGCGTCTACGGATG
ACCGGTCAGCTTTTCAGCGATGCAGAGCGGGAGGCTCGTGTGAATATGGT
GGCAGATTTGTTGGGCTTGGATGTGTGTTTGCATAGCATTTGTGGTGATG
CGATGAATAGGGGCATAAGCGGGGGGCAGCTGAAGAGGTTGAGCATTGGG
GTGGAGATAATGAACATGCCCAGCTTGATCTTTCTGGACGAGCCCACTAG
TGGCTTGGACTCGGTCATTGCGCTAGAAGTCATGTCTTTCGTCCACAAGC
TCGCCCAGCAACGCCGTACAGTCCTCGCCACCATCCACCAGCCCTCCCCC
GATACTTTCTCCTTAGCCAGTGCGGTCGTTCTGCTTTCTGGGGGCCGGTT
GTGCTATTGCGGCCCAAGCCAAAAAGTGATCGAGTATTTTCAAAATTTGA
ATTTTCAATTTGAGGGGTTTTCGAACCCAGCAGACTTCGCCTTGTCGGTC
GTGGGGGGTTCCTTGGGGCCACGCCCGCCTGCGATAGGCAGCAGCAGCAG
CAGCAGCAGCAGTAGCAGTGGTGGGGATGGTGGTGTGAGAGAGGGTGGTG
GAGGAGGAGGGAGGGAAGGAGGGAGCGTGAACGGGAGCACCAGCGCCGGT
ACCAGACCTTGGAGCCCACGAGAGCTGTCAACTCACTTCAAGGCTTCTCC
TGGATACCGTGCCACCATTAGCAGCACCACCAACGGCAGCATTCATCATC
CGCTTCCCTCCCGCCCATCTTCTAAGGTCTCCTCCTCTTCCCGTCCCTCC
CTCCTCCGTCACTCCCATCCCCCTTCCTTCCCCACCTCTCTCCCGACACA
ATGCCGGGTCCTCCTCGCACGTGCCTGGCTCACCCAAACCCGCCAAGTCG
ACTTCATCCGTGCTCAAGTTGCGAAGAACCTCATCGTCGCGCTTGTCTGC
GGCGCCATTTTTTACGGCCAAGGCGCTGTGTCCCCCCCCTCGGACCAGTT
CAATCAAGAGTCTTTCAACGTCTCCTCCATCCTCTTCTTCGCCATGATGT
ACACCATCATCAGCAACCTGCAAGCCATCCCCCAGCTCTTCGCCCAACGC
GTCCAATACGTCCGCGAGCGCTCCGCCTTCCTCTACTCAACCTTTGCCTT
CTGGTTCGCCAATGCCCTTGTCAACCTGCCCCTGGTCCTGGCCTCCCACC
TCCTCTTCCTCAACGTTGCCTATTTCCTCGTCCAACTCGACCACTCCCCC
TCCGTCTTCTGGTACACCCTCTTTATCACCATGCTTAACAACCTGATCTC
CTTCTACTTCGCGCAATTTCTGGCCGCTGCCGCCCCATCCTCCCAGGTGG
CCCTCGCCATCTTTCCTGTCACGTTTTTGTTCCTCACGTCCTTTGCGGGC
TTCACGGTGCCGTTGCAGGACTTGCCGAGTGGCTGGGTATGGGCCAGTTA
CGTGTCATATCCCCGGTGGTGTTATGAGGGGATGGTGGCGTCGCAGTTCT
CGGTCCGGGCCGACGGGGCGAGCACCATGGAGTACTACGGCTTCAGTGAC
TGGAGGCCTGCAGAGAGCTTTCCGGTGCTTTTCATCTTCCTCCTCTTAAT
GAATGGGAGTGTATACTGGGGACTCTTGCCGAAGAAGAGTCAGTTGGTGT
ATGTGGGAGGGAGGGGGCGGGGGAGGGAGAAAGCAAGGGGGGAGGAGAGG
GAGGAGAGAGGGAGTGCCTTGAGGGCCACGTTGTTGTTGGAGAGGGAAGA
GGAGGACGAGGAGGAAGACGAGGACGAGGACGAAGATAGCATTAACGATG
AGGACGGGGAAGTGGACGAGGAAGCGGGCCTACGAAGGGGCAGGAGGGGA
GGGAGGAAGGGTGCTTATCACCTGTCGAGCACAATTGCTGATGTTGCAGG
TCAATACAGGCCTCATTCTTCTGCTGCCTCGGGGGGGACAAGTAAAGGGT
TGAGACAGAAGCTACTGGCTGCAGACGAGAAAGATCTGGACATTCCGCGG
GTGTTGCTGGAGAGCCTGACCGGCACGAGCGACACGGCGTCGATCGACTC
GAGGCTGAACCGAGGGGGAGGGAGGGAGGGAGGAGGGGGAGGAGCGTGGG
GCTTCCAGCAGCCGTACGGTGAGAGTGGGCCAGAGGAAGGGGGAGGGGAT
GGGGGGGAGTGCTTGGATGTGAAGGACTATGAGTCGCGGAGTTCGAACAT
CCAAAAATGTGGGGGCATTCGGCTCGTGTTTCGAAATTTAACTTATTCCC
TGGATAGACCCCTCGCTGGGCGACGCAGCAGTCGCCGTAGCAGGAGTGAT
GGGGCGGAGAAAGAGAAGATGCTGCTGAAGGGAGCCAGTGGAAGGATCAA
CCCCGGGGAGATGTGCGCATTAATGGGGGGTAGTGGGGCGGGGAAGACGA
CGTTGCTTGACGTCTTGGCGGGGAGGAAGACCTCGGGGTACATCGTGGGG
GAGGTTTACTTCAATGGCAAGGCCGGGATGCCAAACCGGACGAGGTGTTC
ATATGTGACGCAGGATAACGTCCACATAGGGTGTTTCACGGTTCGGGAGA
CGTTGTGGTTTGCGTCCTTGTTGCGGATCAAGGAGTCGGTGGGGGTAGCG
GAGAGGAAGAAGCGGGTGGAAAACGTGCTGGGGATGTTGGGGCTGGAGTT
GGTTGCTGACGTCCTGGTGGGCGATACCTTGAGGAAGGGCATCAGTGGGG
GCCAAGCCAGGCGGCTGACTATAGGTGTGGAGATCATTAATCTGCCGGGT
ATAATTTTCTTGGATGAGCCGACGACGGGATTGGACTCCAACATCTCTTA
CGAAGTCATGGCCGCCGTCCGCAACCTCGCCAATCAAAACCGGACAGTGT
GCTGCACCATCCACCAGCCCTCCATCGAGGTCTTTGCGCTCTTCGACAAG
CTCATCCTCATGGCGCAGGGGGAGCAGATCTATTACGGGACCACGCACGA
AGCCGTCAAGTACTTCTCGAGCCCGGCCTTGGACTTCATGTTCAGCAAGG
GCATGAACCCGGCCGAGTACGTGATGGCCGCCTCCTCCGGCACCTTGCAG
ACGAGGGGGGGAAGGAAGAGGGATGTAAGAGAGCTAGCAGCATTGTATCG
GGCGTCGGAGCTGTGCGCGCAGTTCAGTGATAGTTTGGATGCGGCTGTCC
TGGGGGGGAGGGAGGGAGGGAGGGAGGAGGGGGAGGCGGGGGCGGGGTTG
GAGGGACGGCTGTTCCCAAGGGACATGCTCCAGATCAATCACATTCTGGT
GAAAAGACAGTTTTTGAAAATGAGGCGGAATCGACGGCCGGTGGTTGTGG
GCGTGTTGCGGCATATCCTGGTGGCATTGTTTTATGGGAGTTTATATTGG
CAAGTAGCATCGACGGCGATTCAAAGCAGGTTGAGCCTGCTGTTCTTTGC
CATCATGTTTGTGATGGTTGGGAACCAGCAGACGATTCCCGGAGTGCACG
AGGATCGATTGCTTTACTACCGCGAAAAGGGGGCGCATGTCTACGGTCCT
TTCTCCTACTGGATGACGTGTGCCGCTTCCTACGTCCCCCAAAACATCCT
CAACACGCTGCTGTACAGTGCCATCGTCTACACCATGTCCGGGCTCCACA
ACAGCTTTGCCTGTTTTGGGTACTTCTATCTGATCATCATGCTCTGCTCC
CTCTGCGCCCTCTTCTTCTGCCAACTCCTCTCCATTACCCTGCATAGTCC
CCAAACGGCCGTGGCCGTCTTTCCCGCCACCCTCTTCATATTTTCCTCCT
TCGCCGGGTTTATCGTGCGCTTGCCCTCCCTTCCTTCCTGGCTTGGGACG
TGGTGCCCGGATGTGAGCTTCGCGAGGTGGGCTTTTCAGGGACTGGTGAT
TAATGAGTTCGAGGGAAACGCGAGGGTGAGTTATCGGGATCTACCGGCCG
TGTATTACAGTCCCGATCCGTATCAGACTATGGTGGAAAGCCTGGGTTTT
GAAGGGTTCTCGAAATGGTTCACGGTGCCGATTTTGTTGTTGAACATGGT
GGTGTTCAGGGGCTTGACGTACGTGAGTCTTGTATGGGTTAATCACGAGA
GGAGGTAG

protein sequence of NO25G00700.1

>NO25G00700.1-protein ID=NO25G00700.1-protein|Name=NO25G00700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1536bp
MHNGTSTFILMPAFALSLTSRAINNANGCLRAKAHCSSSHFRTIVAMREV
SAAPADGRSGSDDKRFIVKPQGLEGGGTSWSRTGVTVSAHHISYAVPPPT
KRGRNQKKKRPTMLLRDVSMQVQPGELCYLMGPSGAGKTTLLEVLAGRLQ
VGTLRGEVLFNGQPRDGTYWRESSYVKQDDVHIAQLTVQETLRFAARLRM
TGQLFSDAEREARVNMVADLLGLDVCLHSICGDAMNRGISGGQLKRLSIG
VEIMNMPSLIFLDEPTSGLDSVIALEVMSFVHKLAQQRRTVLATIHQPSP
DTFSLASAVVLLSGGRLCYCGPSQKVIEYFQNLNFQFEGFSNPADFALSV
VGGSLGPRPPAIGSSSSSSSSSSGGDGGVREGGGGGGREGGSVNGSTSAG
TRPWSPRELSTHFKASPGYRATISSTTNGSIHHPLPSRPSSKVSSSSRPS
LLRHSHPPSFPTSLPTQCRVLLARAWLTQTRQVDFIRAQVAKNLIVALVC
GAIFYGQGAVSPPSDQFNQESFNVSSILFFAMMYTIISNLQAIPQLFAQR
VQYVRERSAFLYSTFAFWFANALVNLPLVLASHLLFLNVAYFLVQLDHSP
SVFWYTLFITMLNNLISFYFAQFLAAAAPSSQVALAIFPVTFLFLTSFAG
FTVPLQDLPSGWVWASYVSYPRWCYEGMVASQFSVRADGASTMEYYGFSD
WRPAESFPVLFIFLLLMNGSVYWGLLPKKSQLVYVGGRGRGREKARGEER
EERGSALRATLLLEREEEDEEEDEDEDEDSINDEDGEVDEEAGLRRGRRG
GRKGAYHLSSTIADVAGQYRPHSSAASGGTSKGLRQKLLAADEKDLDIPR
VLLESLTGTSDTASIDSRLNRGGGREGGGGGAWGFQQPYGESGPEEGGGD
GGECLDVKDYESRSSNIQKCGGIRLVFRNLTYSLDRPLAGRRSSRRSRSD
GAEKEKMLLKGASGRINPGEMCALMGGSGAGKTTLLDVLAGRKTSGYIVG
EVYFNGKAGMPNRTRCSYVTQDNVHIGCFTVRETLWFASLLRIKESVGVA
ERKKRVENVLGMLGLELVADVLVGDTLRKGISGGQARRLTIGVEIINLPG
IIFLDEPTTGLDSNISYEVMAAVRNLANQNRTVCCTIHQPSIEVFALFDK
LILMAQGEQIYYGTTHEAVKYFSSPALDFMFSKGMNPAEYVMAASSGTLQ
TRGGRKRDVRELAALYRASELCAQFSDSLDAAVLGGREGGREEGEAGAGL
EGRLFPRDMLQINHILVKRQFLKMRRNRRPVVVGVLRHILVALFYGSLYW
QVASTAIQSRLSLLFFAIMFVMVGNQQTIPGVHEDRLLYYREKGAHVYGP
FSYWMTCAASYVPQNILNTLLYSAIVYTMSGLHNSFACFGYFYLIIMLCS
LCALFFCQLLSITLHSPQTAVAVFPATLFIFSSFAGFIVRLPSLPSWLGT
WCPDVSFARWAFQGLVINEFEGNARVSYRDLPAVYYSPDPYQTMVESLGF
EGFSKWFTVPILLLNMVVFRGLTYVSLVWVNHERR*

mRNA from alignment at chr25:192937..197942+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO25G00700.1 ID=NO25G00700.1|Name=NO25G00700.1|organism=Nannochloropsis oceanica|type=mRNA|length=5006bp|location=Sequence derived from alignment at chr25:192937..197942+ (Nannochloropsis oceanica)
ATGCACAACGGTACCAGCACGTTTATACTCATGCCAGCATTCGCTTTATC
ACTCACATCCAGGGCTATCAACAATGCCAATGGCTGCTTGCGTGCCAAGG
CCCATTGCTCGTCATCTCATTTTCGGTGATCATCCTGCCCCCCTCCCCCC
CCCTTGGCTATCTACCCTCGTGTCGTGTGCTTTCATTTACTCACACCACA
CTCCACAATACGCACCACACAGCACTATAGTAGCCATGCGCGAGGTGTCG
GCGGCGCCGGCTGATGGCAGGAGCGGCAGCGACGACAAGCGCTTTATAGT
CAAGCCCCAAGGCCTCGAGGGGGGAGGCACATCCTGGTCGCGTACGGGTG
TCACCGTGTCGGCGCACCATATTAGCTATGCCGTGCCCCCGCCGACGAAA
CGGGGTAGAAATCAGAAGAAGAAGCGACCCACTATGTTGTTGCGGGATGT
ATCGATGCAGGTGCAGCCCGGTGAGCTGTGTTATCTCATGGGACCTTCGG
GAGCGGGTAAGACGACTTTGCTCGAAGTCCTTGCGGGGCGCTTGCAAGTA
GGAACGCTACGGGGAGAAGTGCTCTTTAATGGTCAGCCCCGCGATGGGAC
TTATTGGCGGGAGAGCTCATATGTGAAGCAGGATGACGTGCATATTGCCC
AACTGACGGTTCAAGAGACTTTGAGGTTTGCGGCGCGTCTACGGATGACC
GGTCAGCTTTTCAGCGATGCAGAGCGGGAGGCTCGTGTGAATATGGTGGC
AGATTTGTTGGGCTTGGATGTGTGTTTGCATAGCATTTGTGGTGATGCGA
TGAATAGGGGCATAAGCGGGGGGCAGCTGAAGAGGTTGAGCATTGGGGTG
GAGATAATGAACATGCCCAGCTTGATCTTTCTGGACGAGCCCACTAGTGG
CTTGGACTCGGTCATTGCGCTAGAAGGTGATCATAAAGGGTGTGGTAGAG
GGGATGTGTGGGTGTGTGCGCATTTTATTCAGACTTTTCAATGAATCTTA
ATCACATCACTCACACCTTTCTACTCGCCTTCCTTCTTGCCTATTCCCCT
CCCCCAGTCATGTCTTTCGTCCACAAGCTCGCCCAGCAACGCCGTACAGT
CCTCGCCACCATCCACCAGCCCTCCCCCGATACTTTCTCCTTAGCCAGTG
CGGTCGTTCTGCTTTCTGGGGGCCGGTTGTGCTATTGCGGCCCAAGCCAA
AAAGTGATCGAGTATTTTCAAAATTTGAATTTTCAATTTGAGGGGTTTTC
GAACCCAGCAGACTTCGCCTTGTCGGTCGTGGGGGGTTCCTTGGGGCCAC
GCCCGCCTGCGATAGGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGTGGT
GGGGATGGTGGTGTGAGAGAGGGTGGTGGAGGAGGAGGGAGGGAAGGAGG
GAGCGTGAACGGGAGCACCAGCGCCGGTACCAGACCTTGGAGCCCACGAG
AGCTGTCAACTCACTTCAAGGCTTCTCCTGGATACCGTGCCACCATTAGC
AGCACCACCAACGGCAGCATTCATCATCCGCTTCCCTCCCGCCCATCTTC
TAAGGTCTCCTCCTCTTCCCGTCCCTCCCTCCTCCGTCACTCCCATCCCC
CTTCCTTCCCCACCTCTCTCCCGACACAATGCCGGGTCCTCCTCGCACGT
GCCTGGCTCACCCAAACCCGCCAAGTCGACTTCATCCGTGCTCAAGTTGC
GAAGAACCTCATCGTCGCGCTTGTCTGCGGCGCCATTTTTTACGGCCAAG
GCGCTGTGTCCCCCCCCTCGGACCAGTTCAATCAAGAGTCTTTCAACGTC
TCCTCCATCCTCTTCTTCGCCATGATGTACACCATCATCAGCAACCTGCA
AGCCATCCCCCAGCTCTTCGCCCAACGCGTCCAATACGTCCGCGAGCGCT
CCGCCTTCCTCTACTCAACCTTTGCCTTCTGGTTCGCCAATGCCCTTGTC
AACCTGCCCCTGGTCCTGGCCTCCCACCTCCTCTTCCTCAACGTTGCCTA
TTTCCTCGTCCAACTCGACCACTCCCCCTCCGTCTTCTGGTACACCCTCT
TTATCACCATGCTTAACAACCTGATCTCCTTCTACTTCGCGCAATTTCTG
GCCGCTGCCGCCCCATCCTCCCAGGTGGCCCTCGCCATCTTTCCTGTCAC
GTTTTTGTTCCTCACGTCCTTTGCGGGCTTCACGGTGCCGTTGCAGGACT
TGCCGAGTGGCTGGGTATGGGCCAGTTACGTGTCATATCCCCGGTGGTGT
TATGAGGGGATGGTGGCGTCGCAGTTCTCGGTCCGGGCCGACGGGGCGAG
CACCATGGAGTACTACGGCTTCAGTGACTGGAGGCCTGCAGAGAGCTTTC
CGGTGCTTTTCATCTTCCTCCTCTTAATGAATGGGAGTGTATACTGGGGA
CTCTTGCCGAAGAAGAGTCAGTTGGTGTATGTGGGAGGGAGGGGGCGGGG
GAGGGAGAAAGCAAGGGGGGAGGAGAGGGAGGAGAGAGGGAGTGCCTTGA
GGGCCACGTTGTTGTTGGAGAGGGAAGAGGAGGACGAGGAGGAAGACGAG
GACGAGGACGAAGATAGCATTAACGATGAGGACGGGGAAGTGGACGAGGA
AGCGGGCCTACGAAGGGGCAGGAGGGGAGGGAGGAAGGGTGCTTATCACC
TGTCGAGCACAATTGCTGATGTTGCAGGTCAATACAGGCCTCATTCTTCT
GCTGCCTCGGGGGGGACAAGTAAAGGGTTGAGACAGAAGCTACTGGCTGC
AGACGAGAAAGATCTGGACATTCCGCGGGTGTTGCTGGAGAGCCTGACCG
GCACGAGCGACACGGCGTCGATCGACTCGAGGCTGAACCGAGGGGGAGGG
AGGGAGGGAGGAGGGGGAGGAGCGTGGGGCTTCCAGCAGCCGTACGGTGA
GAGTGGGCCAGAGGAAGGGGGAGGGGATGGGGGGGAGTGCTTGGATGTGA
AGGACTATGAGTCGCGGAGTTCGAACATCCAAAAATGTGGGGGCATTCGG
CTCGTGTTTCGAAATTTAACTTATTCCCTGGATAGACCCCTCGCTGGGCG
ACGCAGCAGTCGCCGTAGCAGGAGTGATGGGGCGGAGAAAGAGAAGATGC
TGCTGAAGGGAGCCAGTGGAAGGATCAACCCCGGGGAGATGTGCGCATTA
ATGGGGGGTAGTGGGGCGGGGAAGACGACGTTGCTTGACGTCTTGGCGGG
GAGGAAGACCTCGGGGTACATCGTGGGGGAGGTTTACTTCAATGGCAAGG
CCGGGATGCCAAACCGGACGAGGTGTTCATATGTGACGCAGGATAACGTC
CACATAGGGTGTTTCACGGTTCGGGAGACGTTGTGGTTTGCGTCCTTGTT
GCGGATCAAGGAGTCGGTGGGGGTAGCGGAGAGGAAGAAGCGGGTGGAAA
ACGTGCTGGGGATGTTGGGGCTGGAGTTGGTTGCTGACGTCCTGGTGGGC
GATACCTTGAGGAAGGGCATCAGTGGGGGCCAAGCCAGGCGGCTGACTAT
AGGTGTGGAGATCATTAATCTGCCGGGTATAATTTTCTTGGATGAGCCGA
CGACGGGATTGGTGAGTACGGGGGAGGGATGGAGGGAGGAAATGAGGGAG
GGCGGGGAGTATATGTATGAAAATGGTGAAAAGTTGTGCCTGTCCTTTTA
CTATATGAGGATCTTATCCTTCTATTCCTCCCTTCCTTTCCCCCTCATTT
CCTCTCTTTCACTTTCCCTCCTTTGCCCCAGGACTCCAACATCTCTTACG
AAGTCATGGCCGCCGTCCGCAACCTCGCCAATCAAAACCGGACAGTGTGC
TGCACCATCCACCAGCCCTCCATCGAGGTCTTTGCGCTCTTCGACAAGCT
CATCCTCATGGCGCAGGGGGAGCAGATCTATTACGGGACCACGCACGAAG
CCGTCAAGTACTTCTCGAGCCCGGCCTTGGACTTCATGTTCAGCAAGGGC
ATGAACCCGGCCGAGTACGTGATGGCCGCCTCCTCCGGCACCTTGCAGAC
GAGGGGGGGAAGGAAGAGGGATGTAAGAGAGCTAGCAGCATTGTATCGGG
CGTCGGAGCTGTGCGCGCAGTTCAGTGATAGTTTGGATGCGGCTGTCCTG
GGGGGGAGGGAGGGAGGGAGGGAGGAGGGGGAGGCGGGGGCGGGGTTGGA
GGGACGGCTGTTCCCAAGGGACATGCTCCAGATCAATCACATTCTGGTGA
AAAGACAGTTTTTGAAAATGAGGCGGAATCGACGGCCGGTGGTTGTGGGC
GTGTTGCGGCATATCCTGGTGGCATTGTTTTATGGGAGTTTATATTGGCA
AGTAGCATCGACGGCGATTCAAAGCAGGTTGAGCCTGCTGTTCTTTGCCA
TCATGTTTGTGATGGTTGGGAACCAGCAGACGATTCCCGGAGTGCACGAG
GATCGATTGCTTTACTACCGCGAAAAGGGGGCGCATGTCTACGGTCCTTT
CTCCTACTGGATGACGTGTGCCGCTTCCTACGTCCCCCAAAACATCCTCA
ACACGCTGCTGTACAGTGCCATCGTCTACACCATGTCCGGGCTCCACAAC
AGCTTTGCCTGTTTTGGGTACTTCTATCTGATCATCATGCTCTGCTCCCT
CTGCGCCCTCTTCTTCTGCCAACTCCTCTCCATTACCCTGCATAGTCCCC
AAACGGCCGTGGCCGTCTTTCCCGCCACCCTCTTCATATTTTCCTCCTTC
GCCGGGTTTATCGTGCGCTTGCCCTCCCTTCCTTCCTGGCTTGGGACGTG
GTGCCCGGATGTGAGCTTCGCGAGGTGGGCTTTTCAGGGACTGGTGATTA
ATGAGTTCGAGGGAAACGCGAGGGTGAGTTATCGGGATCTACCGGCCGTG
TATTACAGTCCCGATCCGTATCAGACTATGGTGGAAAGCCTGGGTTTTGA
AGGGTTCTCGAAATGGTTCACGGTGCCGATTTTGTTGTTGAACATGGTGG
TGTTCAGGGGCTTGACGTACGTGAGTCTTGTATGGGTTAATCACGAGAGG
AGGTAG

Coding sequence (CDS) from alignment at chr25:192937..197942+

>NO25G00700.1 ID=NO25G00700.1|Name=NO25G00700.1|organism=Nannochloropsis oceanica|type=CDS|length=4608bp|location=Sequence derived from alignment at chr25:192937..197942+ (Nannochloropsis oceanica)
ATGCACAACGGTACCAGCACGTTTATACTCATGCCAGCATTCGCTTTATC
ACTCACATCCAGGGCTATCAACAATGCCAATGGCTGCTTGCGTGCCAAGG
CCCATTGCTCGTCATCTCATTTTCGCACTATAGTAGCCATGCGCGAGGTG
TCGGCGGCGCCGGCTGATGGCAGGAGCGGCAGCGACGACAAGCGCTTTAT
AGTCAAGCCCCAAGGCCTCGAGGGGGGAGGCACATCCTGGTCGCGTACGG
GTGTCACCGTGTCGGCGCACCATATTAGCTATGCCGTGCCCCCGCCGACG
AAACGGGGTAGAAATCAGAAGAAGAAGCGACCCACTATGTTGTTGCGGGA
TGTATCGATGCAGGTGCAGCCCGGTGAGCTGTGTTATCTCATGGGACCTT
CGGGAGCGGGTAAGACGACTTTGCTCGAAGTCCTTGCGGGGCGCTTGCAA
GTAGGAACGCTACGGGGAGAAGTGCTCTTTAATGGTCAGCCCCGCGATGG
GACTTATTGGCGGGAGAGCTCATATGTGAAGCAGGATGACGTGCATATTG
CCCAACTGACGGTTCAAGAGACTTTGAGGTTTGCGGCGCGTCTACGGATG
ACCGGTCAGCTTTTCAGCGATGCAGAGCGGGAGGCTCGTGTGAATATGGT
GGCAGATTTGTTGGGCTTGGATGTGTGTTTGCATAGCATTTGTGGTGATG
CGATGAATAGGGGCATAAGCGGGGGGCAGCTGAAGAGGTTGAGCATTGGG
GTGGAGATAATGAACATGCCCAGCTTGATCTTTCTGGACGAGCCCACTAG
TGGCTTGGACTCGGTCATTGCGCTAGAAGTCATGTCTTTCGTCCACAAGC
TCGCCCAGCAACGCCGTACAGTCCTCGCCACCATCCACCAGCCCTCCCCC
GATACTTTCTCCTTAGCCAGTGCGGTCGTTCTGCTTTCTGGGGGCCGGTT
GTGCTATTGCGGCCCAAGCCAAAAAGTGATCGAGTATTTTCAAAATTTGA
ATTTTCAATTTGAGGGGTTTTCGAACCCAGCAGACTTCGCCTTGTCGGTC
GTGGGGGGTTCCTTGGGGCCACGCCCGCCTGCGATAGGCAGCAGCAGCAG
CAGCAGCAGCAGTAGCAGTGGTGGGGATGGTGGTGTGAGAGAGGGTGGTG
GAGGAGGAGGGAGGGAAGGAGGGAGCGTGAACGGGAGCACCAGCGCCGGT
ACCAGACCTTGGAGCCCACGAGAGCTGTCAACTCACTTCAAGGCTTCTCC
TGGATACCGTGCCACCATTAGCAGCACCACCAACGGCAGCATTCATCATC
CGCTTCCCTCCCGCCCATCTTCTAAGGTCTCCTCCTCTTCCCGTCCCTCC
CTCCTCCGTCACTCCCATCCCCCTTCCTTCCCCACCTCTCTCCCGACACA
ATGCCGGGTCCTCCTCGCACGTGCCTGGCTCACCCAAACCCGCCAAGTCG
ACTTCATCCGTGCTCAAGTTGCGAAGAACCTCATCGTCGCGCTTGTCTGC
GGCGCCATTTTTTACGGCCAAGGCGCTGTGTCCCCCCCCTCGGACCAGTT
CAATCAAGAGTCTTTCAACGTCTCCTCCATCCTCTTCTTCGCCATGATGT
ACACCATCATCAGCAACCTGCAAGCCATCCCCCAGCTCTTCGCCCAACGC
GTCCAATACGTCCGCGAGCGCTCCGCCTTCCTCTACTCAACCTTTGCCTT
CTGGTTCGCCAATGCCCTTGTCAACCTGCCCCTGGTCCTGGCCTCCCACC
TCCTCTTCCTCAACGTTGCCTATTTCCTCGTCCAACTCGACCACTCCCCC
TCCGTCTTCTGGTACACCCTCTTTATCACCATGCTTAACAACCTGATCTC
CTTCTACTTCGCGCAATTTCTGGCCGCTGCCGCCCCATCCTCCCAGGTGG
CCCTCGCCATCTTTCCTGTCACGTTTTTGTTCCTCACGTCCTTTGCGGGC
TTCACGGTGCCGTTGCAGGACTTGCCGAGTGGCTGGGTATGGGCCAGTTA
CGTGTCATATCCCCGGTGGTGTTATGAGGGGATGGTGGCGTCGCAGTTCT
CGGTCCGGGCCGACGGGGCGAGCACCATGGAGTACTACGGCTTCAGTGAC
TGGAGGCCTGCAGAGAGCTTTCCGGTGCTTTTCATCTTCCTCCTCTTAAT
GAATGGGAGTGTATACTGGGGACTCTTGCCGAAGAAGAGTCAGTTGGTGT
ATGTGGGAGGGAGGGGGCGGGGGAGGGAGAAAGCAAGGGGGGAGGAGAGG
GAGGAGAGAGGGAGTGCCTTGAGGGCCACGTTGTTGTTGGAGAGGGAAGA
GGAGGACGAGGAGGAAGACGAGGACGAGGACGAAGATAGCATTAACGATG
AGGACGGGGAAGTGGACGAGGAAGCGGGCCTACGAAGGGGCAGGAGGGGA
GGGAGGAAGGGTGCTTATCACCTGTCGAGCACAATTGCTGATGTTGCAGG
TCAATACAGGCCTCATTCTTCTGCTGCCTCGGGGGGGACAAGTAAAGGGT
TGAGACAGAAGCTACTGGCTGCAGACGAGAAAGATCTGGACATTCCGCGG
GTGTTGCTGGAGAGCCTGACCGGCACGAGCGACACGGCGTCGATCGACTC
GAGGCTGAACCGAGGGGGAGGGAGGGAGGGAGGAGGGGGAGGAGCGTGGG
GCTTCCAGCAGCCGTACGGTGAGAGTGGGCCAGAGGAAGGGGGAGGGGAT
GGGGGGGAGTGCTTGGATGTGAAGGACTATGAGTCGCGGAGTTCGAACAT
CCAAAAATGTGGGGGCATTCGGCTCGTGTTTCGAAATTTAACTTATTCCC
TGGATAGACCCCTCGCTGGGCGACGCAGCAGTCGCCGTAGCAGGAGTGAT
GGGGCGGAGAAAGAGAAGATGCTGCTGAAGGGAGCCAGTGGAAGGATCAA
CCCCGGGGAGATGTGCGCATTAATGGGGGGTAGTGGGGCGGGGAAGACGA
CGTTGCTTGACGTCTTGGCGGGGAGGAAGACCTCGGGGTACATCGTGGGG
GAGGTTTACTTCAATGGCAAGGCCGGGATGCCAAACCGGACGAGGTGTTC
ATATGTGACGCAGGATAACGTCCACATAGGGTGTTTCACGGTTCGGGAGA
CGTTGTGGTTTGCGTCCTTGTTGCGGATCAAGGAGTCGGTGGGGGTAGCG
GAGAGGAAGAAGCGGGTGGAAAACGTGCTGGGGATGTTGGGGCTGGAGTT
GGTTGCTGACGTCCTGGTGGGCGATACCTTGAGGAAGGGCATCAGTGGGG
GCCAAGCCAGGCGGCTGACTATAGGTGTGGAGATCATTAATCTGCCGGGT
ATAATTTTCTTGGATGAGCCGACGACGGGATTGGACTCCAACATCTCTTA
CGAAGTCATGGCCGCCGTCCGCAACCTCGCCAATCAAAACCGGACAGTGT
GCTGCACCATCCACCAGCCCTCCATCGAGGTCTTTGCGCTCTTCGACAAG
CTCATCCTCATGGCGCAGGGGGAGCAGATCTATTACGGGACCACGCACGA
AGCCGTCAAGTACTTCTCGAGCCCGGCCTTGGACTTCATGTTCAGCAAGG
GCATGAACCCGGCCGAGTACGTGATGGCCGCCTCCTCCGGCACCTTGCAG
ACGAGGGGGGGAAGGAAGAGGGATGTAAGAGAGCTAGCAGCATTGTATCG
GGCGTCGGAGCTGTGCGCGCAGTTCAGTGATAGTTTGGATGCGGCTGTCC
TGGGGGGGAGGGAGGGAGGGAGGGAGGAGGGGGAGGCGGGGGCGGGGTTG
GAGGGACGGCTGTTCCCAAGGGACATGCTCCAGATCAATCACATTCTGGT
GAAAAGACAGTTTTTGAAAATGAGGCGGAATCGACGGCCGGTGGTTGTGG
GCGTGTTGCGGCATATCCTGGTGGCATTGTTTTATGGGAGTTTATATTGG
CAAGTAGCATCGACGGCGATTCAAAGCAGGTTGAGCCTGCTGTTCTTTGC
CATCATGTTTGTGATGGTTGGGAACCAGCAGACGATTCCCGGAGTGCACG
AGGATCGATTGCTTTACTACCGCGAAAAGGGGGCGCATGTCTACGGTCCT
TTCTCCTACTGGATGACGTGTGCCGCTTCCTACGTCCCCCAAAACATCCT
CAACACGCTGCTGTACAGTGCCATCGTCTACACCATGTCCGGGCTCCACA
ACAGCTTTGCCTGTTTTGGGTACTTCTATCTGATCATCATGCTCTGCTCC
CTCTGCGCCCTCTTCTTCTGCCAACTCCTCTCCATTACCCTGCATAGTCC
CCAAACGGCCGTGGCCGTCTTTCCCGCCACCCTCTTCATATTTTCCTCCT
TCGCCGGGTTTATCGTGCGCTTGCCCTCCCTTCCTTCCTGGCTTGGGACG
TGGTGCCCGGATGTGAGCTTCGCGAGGTGGGCTTTTCAGGGACTGGTGAT
TAATGAGTTCGAGGGAAACGCGAGGGTGAGTTATCGGGATCTACCGGCCG
TGTATTACAGTCCCGATCCGTATCAGACTATGGTGGAAAGCCTGGGTTTT
GAAGGGTTCTCGAAATGGTTCACGGTGCCGATTTTGTTGTTGAACATGGT
GGTGTTCAGGGGCTTGACGTACGTGAGTCTTGTATGGGTTAATCACGAGA
GGAGGTAG

Synonyms

Publications