NO22G00890.1, NO22G00890.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO22G00890.1
Unique Name	NO22G00890.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3901
Alignment location	chr22:278980..283621 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr22	genome	chr22:278980..283621 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO22G00890.1 vs.
Match: EWM21459.1 (minichromosome maintenance protein 2 [Nannochloropsis gaditana])

HSP 1 Score: 1571.6 bits (4068), Expect = 0.000e+0
Identity = 813/938 (86.67%), Postives = 868/938 (92.54%), Query Frame = 0

Query:    1 MSTTGGGGDGGGDGSESNKRRRVLLDSDDEE-DMAPAPPPPPPPLSPLPGLDDRHDDGSDLEEVVEEEGIEDERLTDNDEDGAAAGLSDEDGEDLMENMEADYVAIPELDTYDMGNLDQREYGAMDFDARRAAEVEIAERTEQRGRLDDILDRYGDEDEEARDRRRGAFDQRRAQEGMMGLDGSLEVEDEDLNLEAYDVPLREWIAEDRTRREVKRRFRSLLEESKDGNGRLRYMDSIRNMCAANLRSLEVHYEVLRQEQATLALWLMDAPEDILEVFDEVANEVVLKHYKHYKTMLRDEVHVRIVGHEIVLSLRLLRQSHLNKLVRVVGVVTRRTQVFPQIQSVTFDCANCKSSVGPFKQTEGAEIRPEMCTVCDRTGTFRINQAATVYRDYQKIVLQESPGTVPAGRVPRYKEVILTADLIDRARPGEDIEVTGIYKYRAEGLNGKQKGGFPVFSTCIDANFIHKREDLFSMFHITDDDKADIHRIAAAPNTSELLISAFAPSIHGHEKVKLALLLALFSGVEKNIYNKHRIRGDINVLLLGDPGTAKSQFLKYLEKVAPRAAYTTGKGASAVGLTAGVHKDPMTKEWTLEGGALVLADRGMCLIDEFDKMNDGDRTSIHEALEQQSISVSKAGIVTSLQARCSVVAAANPIGGRYDSSLTFAENVELTDPILQRLDMLCVLQDIVDPIADERLADFVVRSHQRSHPSQAVAGGIGTEHETNPETAALAAEGGVTTVSQRLFTKYIMYARSNVRPQIQDVDQDKIERLYVDLRRESKQCGGVPIAVRHIESIIRMSEAHAKMHLRDHVRDDDVNVAIGLMLHSFLQAQKFSVRTSLERGFRRYITRVTDFNQLLMSELQKLMKDNLTYNLMRRARGPEEEEPVLEVPLSELEERAAELRIYDIRPFLQGEMFKGQGLVVETLVGRQGAVKMIRKVK 938
            MS+ G GG+GGG+G E+NKRRRVL+DSDDEE DMAP PPP  PPLSPLPG  ++ D  SDLEEV+EEEG+E+E +TD D DG  AGLSDE+GEDLMENMEADYVAIPELDTYDMGNLD REY AMDFDARRAAE EIAERTEQRGRLDDILDRYGDEDEEARDRRRG FDQRR Q+  + L+G +E+EDE+LNLEAYDVPLREWIAEDRTRREVKRRFR+LLE SKDG+ RLRYMD+IR+MCAAN+ SLEVHYEVLR+EQ TLALWLMDAPEDILEVFDEVANEVVLKH++HYK MLRD+VHVRIVGH+IVLSLRLLRQSHLNKLVRVVGVVTRRTQVFPQ+QSVTFDC +CK SVGPFKQ EGAE+RPE+C +C+RTG+FRINQAATVYR+YQKIVLQESPGTVPAGRVPRYKEVILTADLIDRARPGEDIEVTG YKYRAEGL+GKQKGGFPVFSTCI+AN+IHKREDLFSMFHITDDDKADIHRIAAAPNT+ELL SAFAPSIHGH+K+KL LLLALFSGVEKN+YNKHRIRGDINVLLLGDPGTAKSQFLKYLEKVAPRA YTTGKGASAVGLTAGVH+DPMTKEWTLEGGALVLADRGMCLIDEFDKMND DRTSIHEALEQQSISVSKAGIVTSLQARCSVVAAANPI GRYDSSLTFAENVELTDPILQRLDMLCVLQDIVDPIADERLADFVVRSHQRSH S +  G  G   E +P    +A      T SQRL TKYIMYARSNVRPQIQDVDQDKIERLYVDLRRESKQCGGVPIAVRHIESIIRMSEAHAKMHLRDHVRDDDVNVAI LMLHSFLQAQKFSVRTSLERGFRRYITR TDFNQLLMSELQKLM+DNLTY++MRR R PE+EEP LEVPLSELEERAAELRIYDIRPFLQGEMF+G GLVVET+VGR GAV+MIRKV+
Sbjct:    1 MSSFGQGGEGGGEGGEANKRRRVLMDSDDEEEDMAPPPPPLAPPLSPLPGDVEQLDAASDLEEVIEEEGVEEEPVTDEDPDGLDAGLSDEEGEDLMENMEADYVAIPELDTYDMGNLDHREYSAMDFDARRAAEAEIAERTEQRGRLDDILDRYGDEDEEARDRRRGMFDQRRQQQ--LELEG-MELEDEELNLEAYDVPLREWIAEDRTRREVKRRFRTLLEGSKDGSNRLRYMDAIRHMCAANMASLEVHYEVLREEQPTLALWLMDAPEDILEVFDEVANEVVLKHFRHYKAMLRDQVHVRIVGHQIVLSLRLLRQSHLNKLVRVVGVVTRRTQVFPQVQSVTFDCTHCKHSVGPFKQAEGAELRPELCIMCERTGSFRINQAATVYRNYQKIVLQESPGTVPAGRVPRYKEVILTADLIDRARPGEDIEVTGTYKYRAEGLSGKQKGGFPVFSTCIEANYIHKREDLFSMFHITDDDKADIHRIAAAPNTAELLTSAFAPSIHGHDKIKLTLLLALFSGVEKNVYNKHRIRGDINVLLLGDPGTAKSQFLKYLEKVAPRAVYTTGKGASAVGLTAGVHRDPMTKEWTLEGGALVLADRGMCLIDEFDKMNDSDRTSIHEALEQQSISVSKAGIVTSLQARCSVVAAANPIRGRYDSSLTFAENVELTDPILQRLDMLCVLQDIVDPIADERLADFVVRSHQRSH-SASTRGESGPAPEEDP----IAGRTPSATPSQRLLTKYIMYARSNVRPQIQDVDQDKIERLYVDLRRESKQCGGVPIAVRHIESIIRMSEAHAKMHLRDHVRDDDVNVAISLMLHSFLQAQKFSVRTSLERGFRRYITRTTDFNQLLMSELQKLMRDNLTYDMMRRGRNPEDEEPTLEVPLSELEERAAELRIYDIRPFLQGEMFRGHGLVVETVVGRHGAVRMIRKVR 930

The following BLAST results are available for this feature:

BLAST of NO22G00890.1 vs.

BLAST of NO22G00890.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM21459.1	0.000e+0	86.67	minichromosome maintenance protein 2 [Nannochlorop...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO22G00890	NO22G00890	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO22G00890.1	NO22G00890.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO22G00890.1.cds1	NO22G00890.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G00890.1.cds2	NO22G00890.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G00890.1.cds3	NO22G00890.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G00890.1.cds4	NO22G00890.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G00890.1.cds5	NO22G00890.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO22G00890.1.cds6	NO22G00890.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr22:278980..283621+
coding sequence from alignment at chr22:278980..283621+

mRNA sequence

>NO22G00890.1 ID=NO22G00890.1|Name=NO22G00890.1|organism=Nannochloropsis oceanica|type=mRNA|length=3901bp
GTCAGTGGAGAGTGAAGAGGCCTGGGAAGGGAATCGTATGATGTGATGCA
CGCATGAGTTGAGGGGCTGAAGCCAAAGGCAAAATAATATGAACAGGACA
AGACGCATCCTTTTTCCCTCTCGCCTTCCAGAATTGTGCCTCGCACGGTA
AGGGGAGGGAGAGGGTTCTATGTGTGAGAGTATAAATACATGCCTATGAT
GCCTATGCCTATGGTGGCGTGTCGCAAAGCAGTGGTGTGAGGGTGCGCGT
CCCAACTTTTCAAAATTGGGCACATGCAGACGCCTCACGCCCGGCAACAG
AACGCCTCGCCAATAACGCGCACGTTCGGCGAGCATGACCGCCTCTGATG
GGAAGGCTCGTATACACCTTCCCAGCATGTGCCTGCAAAGGCGGAGCCAG
ACATGTCAGTACGTATATGGAGAGTAAAGTATGTGATGTGCCCATGATGA
GAAACCATGCCCCCTTTGTGAGCTCGTCAGCTGCTCCCATCACGCGCAAA
TTCTGCTTTCCGCGCGTAGAAAAATGAAGAACCACTATCTATACACTGCA
TCTCATCCGCCCATGCTTTCCATACCACATCGACAGTCATGAGCACTACT
GGCGGTGGTGGCGACGGTGGCGGTGATGGCAGCGAGTCCAACAAGCGTCG
ACGGGTCTTGCTGGATTCGGACGACGAAGAAGACATGGCCCCCGCGCCGC
CTCCCCCTCCTCCTCCTCTATCCCCCCTCCCTGGCCTCGATGACCGGCAC
GACGACGGTTCGGATTTGGAGGAGGTGGTAGAGGAGGAAGGGATCGAAGA
CGAGCGGTTGACGGACAATGACGAGGATGGCGCGGCGGCTGGGTTGAGCG
ATGAAGACGGGGAGGACTTGATGGAGAATATGGAGGCGGATTACGTAGCC
ATCCCTGAGCTCGATACGTACGATATGGGTAATTTGGACCAACGCGAGTA
TGGTGCGATGGATTTCGATGCACGACGGGCGGCAGAGGTGGAGATTGCGG
AGAGAACGGAGCAGAGGGGGAGGCTTGATGACATTCTGGATCGCTATGGT
GATGAGGATGAGGAGGCAAGGGATAGAAGGAGGGGGGCATTCGATCAGAG
GAGGGCACAGGAGGGGATGATGGGGTTGGACGGGAGCTTGGAGGTGGAAG
ATGAGGATTTGAATTTGGAGGCATATGACGTGCCGTTGAGGGAGTGGATA
GCCGAGGACCGGACCAGGAGAGAGGTGAAGAGGCGGTTTCGATCTTTGTT
GGAAGAAAGTAAGGATGGAAATGGACGGTTAAGGTACATGGACAGCATTC
GGAACATGTGCGCGGCAAATTTGAGAAGTTTGGAGGTGCATTATGAGGTG
TTGAGGCAGGAGCAGGCGACCTTGGCCTTGTGGTTGATGGATGCCCCGGA
AGATATACTAGAGGTCTTCGACGAGGTGGCTAACGAGGTTGTTTTAAAGC
ACTACAAGCACTATAAAACCATGCTCCGCGACGAGGTCCACGTCCGCATT
GTTGGGCACGAGATAGTGCTATCCCTCCGTCTCCTGCGCCAGTCGCACCT
GAACAAGCTCGTCCGGGTGGTCGGCGTGGTGACGCGCCGCACGCAGGTAT
TCCCCCAGATCCAGAGCGTCACGTTCGATTGTGCGAATTGCAAAAGTTCA
GTTGGGCCTTTCAAGCAAACAGAGGGAGCGGAGATCCGGCCGGAGATGTG
CACAGTGTGTGACCGTACGGGCACCTTTAGGATCAACCAGGCGGCGACTG
TGTACAGAGACTATCAAAAGATCGTCCTGCAGGAATCCCCCGGCACCGTT
CCCGCGGGCCGAGTGCCCCGCTATAAGGAGGTCATCCTCACTGCCGATCT
CATCGACCGCGCCCGGCCCGGGGAGGACATCGAAGTGACGGGCATATACA
AATACAGGGCAGAGGGCCTGAATGGGAAGCAAAAGGGGGGATTCCCTGTC
TTCAGCACGTGTATTGATGCAAACTTCATTCATAAACGGGAGGATCTGTT
CTCTATGTTTCACATCACGGATGACGATAAGGCGGACATCCACCGCATCG
CCGCGGCGCCCAACACGTCCGAGCTCTTGATCAGCGCCTTCGCCCCCTCC
ATCCACGGCCACGAGAAAGTCAAGCTCGCCCTCCTCCTTGCCCTCTTCTC
CGGCGTCGAGAAGAACATCTACAACAAGCACCGCATCCGTGGCGATATCA
ACGTCCTTCTACTCGGAGACCCCGGCACGGCCAAAAGCCAATTTCTCAAA
TACCTGGAAAAGGTGGCCCCGCGCGCTGCGTACACCACAGGCAAGGGAGC
TAGTGCGGTCGGACTGACGGCGGGGGTGCACAAGGACCCCATGACAAAGG
AATGGACTTTGGAGGGGGGGGCGTTGGTGCTGGCGGACAGGGGCATGTGC
TTGATCGACGAGTTCGACAAGATGAACGATGGCGACCGAACATCCATCCA
CGAGGCGCTTGAGCAGCAATCCATCTCCGTGTCCAAGGCCGGGATTGTGA
CGAGCCTCCAAGCGCGGTGCTCGGTCGTCGCGGCCGCCAACCCAATAGGG
GGAAGGTATGACTCCTCTCTGACCTTCGCGGAGAATGTGGAGCTGACCGA
TCCGATCCTGCAGCGGTTGGATATGCTGTGTGTGCTGCAAGATATCGTCG
ACCCCATCGCCGACGAGCGCCTTGCGGACTTTGTCGTTCGTTCCCACCAA
CGCTCGCACCCGTCCCAGGCCGTTGCAGGCGGGATAGGCACCGAACACGA
GACCAACCCCGAGACGGCCGCCCTGGCTGCGGAGGGGGGCGTGACAACAG
TCTCTCAACGATTGTTTACCAAGTACATCATGTATGCGCGATCAAATGTG
AGGCCTCAGATCCAGGACGTGGATCAGGATAAGATTGAAAGGCTTTACGT
GGACTTGCGCCGGGAGAGCAAGCAATGTGGAGGGGTTCCGATCGCCGTCC
GGCATATCGAGTCTATCATTCGCATGTCCGAAGCCCATGCCAAGATGCAC
TTGCGCGACCACGTCCGGGACGACGACGTTAATGTCGCCATCGGCTTGAT
GCTTCACTCCTTCTTGCAAGCCCAAAAATTCTCCGTGCGAACTTCCCTTG
AGCGGGGCTTCCGGCGGTATATCACCCGCGTGACGGACTTCAACCAGCTG
CTCATGTCGGAGCTCCAAAAGTTGATGAAAGACAACCTCACCTATAACCT
CATGCGGCGTGCCCGAGGCCCCGAGGAGGAAGAACCTGTCCTCGAGGTGC
CTCTGAGTGAGCTGGAGGAGCGGGCGGCCGAGCTCAGAATATACGACATA
CGGCCTTTCTTGCAGGGGGAGATGTTCAAGGGGCAGGGGCTGGTGGTGGA
GACGCTGGTGGGGCGGCAAGGTGCCGTTAAAATGATCAGGAAGGTGAAAT
AATGGCGGAGGGGAGGAGGGAGGGACCCTGGACAGAGGGAGACGAAAGGA
CGTGGTAGAGACGGAGAGAGGGGGGATGGTTCGACAGGGGCAAGAGGAAG
GTAACAAAGCAATCTGCAAGGGCGAGTACAAAAAAGGAAGGGGAACTTGA
AATCTAATGCGAGTGGGAAAAGGGCAAGAGGCTATCCAGAACAAGGCCGC
TTGCAAGGCTGAGTGTGAATGCGGATCTCTACCTCCCTCTGTGCGCATTA
ATCTTGTCGCCGGTCGGGTGGGCCAGAGGTCTATGTCCATTTGAGGAGGA
AGCATCAAAAATCAGCTGTGGAAGAGGAAAGATTAGAGGGAGCACAACTA
CAGACGAAATCAAGAAGGAGAAGCTAATCAGAGGCACCACGATGTCAAAC
TTGCCGGATGAAGAGACATGAGACACCATCACAACCAACAGGTAGTGTAG
GTAAAGAGCAGCCGCCGAAAAAATGGGATAAAACGACACATGTATGTCAT
A

protein sequence of NO22G00890.1

>NO22G00890.1-protein ID=NO22G00890.1-protein|Name=NO22G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=938bp
MSTTGGGGDGGGDGSESNKRRRVLLDSDDEEDMAPAPPPPPPPLSPLPGL
DDRHDDGSDLEEVVEEEGIEDERLTDNDEDGAAAGLSDEDGEDLMENMEA
DYVAIPELDTYDMGNLDQREYGAMDFDARRAAEVEIAERTEQRGRLDDIL
DRYGDEDEEARDRRRGAFDQRRAQEGMMGLDGSLEVEDEDLNLEAYDVPL
REWIAEDRTRREVKRRFRSLLEESKDGNGRLRYMDSIRNMCAANLRSLEV
HYEVLRQEQATLALWLMDAPEDILEVFDEVANEVVLKHYKHYKTMLRDEV
HVRIVGHEIVLSLRLLRQSHLNKLVRVVGVVTRRTQVFPQIQSVTFDCAN
CKSSVGPFKQTEGAEIRPEMCTVCDRTGTFRINQAATVYRDYQKIVLQES
PGTVPAGRVPRYKEVILTADLIDRARPGEDIEVTGIYKYRAEGLNGKQKG
GFPVFSTCIDANFIHKREDLFSMFHITDDDKADIHRIAAAPNTSELLISA
FAPSIHGHEKVKLALLLALFSGVEKNIYNKHRIRGDINVLLLGDPGTAKS
QFLKYLEKVAPRAAYTTGKGASAVGLTAGVHKDPMTKEWTLEGGALVLAD
RGMCLIDEFDKMNDGDRTSIHEALEQQSISVSKAGIVTSLQARCSVVAAA
NPIGGRYDSSLTFAENVELTDPILQRLDMLCVLQDIVDPIADERLADFVV
RSHQRSHPSQAVAGGIGTEHETNPETAALAAEGGVTTVSQRLFTKYIMYA
RSNVRPQIQDVDQDKIERLYVDLRRESKQCGGVPIAVRHIESIIRMSEAH
AKMHLRDHVRDDDVNVAIGLMLHSFLQAQKFSVRTSLERGFRRYITRVTD
FNQLLMSELQKLMKDNLTYNLMRRARGPEEEEPVLEVPLSELEERAAELR
IYDIRPFLQGEMFKGQGLVVETLVGRQGAVKMIRKVK*

mRNA from alignment at chr22:278980..283621+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO22G00890.1 ID=NO22G00890.1|Name=NO22G00890.1|organism=Nannochloropsis oceanica|type=mRNA|length=4642bp|location=Sequence derived from alignment at chr22:278980..283621+ (Nannochloropsis oceanica)
GTCAGTGGAGAGTGAAGAGGCCTGGGAAGGGAATCGTATGATGTGATGCA
CGCATGAGTTGAGGGGCTGAAGCCAAAGGCAAAATAATATGAACAGGACA
AGACGCATCCTTTTTCCCTCTCGCCTTCCAGAATTGTGCCTCGCACGGTA
AGGGGAGGGAGAGGGTTCTATGTGTGAGAGTATAAATACATGCCTATGAT
GCCTATGCCTATGGTGGCGTGTCGCAAAGCAGTGGTGTGAGGGTGCGCGT
CCCAACTTTTCAAAATTGGGCACATGCAGACGCCTCACGCCCGGCAACAG
AACGCCTCGCCAATAACGCGCACGTTCGGCGAGCATGACCGCCTCTGATG
GGAAGGCTCGTATACACCTTCCCAGCATGTGCCTGCAAAGGCGGAGCCAG
ACATGTCAGTACGTATATGGAGAGTAAAGTATGTGATGTGCCCATGATGA
GAAACCATGCCCCCTTTGTGAGCTCGTCAGCTGCTCCCATCACGCGCAAA
TTCTGCTTTCCGCGCGTAGAAAAATGAAGAACCACTATCTATACACTGCA
TCTCATCCGCCCATGCTTTCCATACCACATCGACAGTCATGAGCACTACT
GGCGGTGGTGGCGACGGTGGCGGTGATGGCAGCGAGTCCAACAAGCGTCG
ACGGGTCTTGCTGGATTCGGACGACGAAGAAGACATGGCCCCCGCGCCGC
CTCCCCCTCCTCCTCCTCTATCCCCCCTCCCTGGCCTCGATGACCGGCAC
GACGACGGTTCGGATTTGGAGGAGGTGGTAGAGGAGGAAGGGATCGAAGA
CGAGCGGTTGACGGACAATGACGAGGATGGCGCGGCGGCTGGGTTGAGCG
ATGAAGACGGGGAGGACTTGATGGAGAATATGGAGGCGGATTACGTAGCC
ATCCCTGAGCTCGATACGTACGATATGGGTAATTTGGACCAACGCGAGTA
TGGTGCGATGGATTTCGATGCACGACGGGCGGCAGAGGTGGAGATTGCGG
AGAGAACGGAGCAGAGGGGGAGGCTTGATGACATTCTGGATCGCTATGGT
GATGAGGATGAGGAGGCAAGGGATAGAAGGAGGGGGGCATTCGATCAGAG
GAGGGCACAGGAGGGGATGATGGGGTTGGACGGGAGCTTGGAGGTGGAAG
ATGAGGATTTGAATTTGGAGGCATATGACGTGCCGTTGAGGGAGTGGATA
GCCGAGGACCGGACCAGGAGAGAGGTGAAGAGGCGGTTTCGATCTTTGTT
GGAAGAAAGTAAGGATGGAAATGGACGGTTAAGGTACATGGACAGCATTC
GGAACATGTGCGCGGCAAATTTGAGAAGTTTGGAGGTGCATTATGAGGTG
TTGAGGCAGGAGCAGGCGACCTTGGCCTTGTGGTTGATGGATGCCCCGGA
AGATATACTAGAGGTAGGCCACTCCTCCCTCCGTCCCTCCCTCCCTCCCT
CCGTCCCTTCCTCCTCCCTCCCTCCTTCTATCCCTCCTTCCATCCCGTCC
TCCCCTCTTTCCCTCCTCCTTCTCTCCTTCCATCCCTCCTTCCCTCCCTC
CCTCAGCCTCAATTGTGGTCACCTCATCGAGCTCATCGAGCTGACACACT
CTTCAATACTTGCATTTTCCTCCCTCCTCTCTTCCCCCCCCCCCCTCCTC
CTCAAGGTCTTCGACGAGGTGGCTAACGAGGTTGTTTTAAAGCACTACAA
GCACTATAAAACCATGCTCCGCGACGAGGTCCACGTCCGCATTGTTGGGC
ACGAGATAGTGCTATCCCTCCGTCTCCTGCGCCAGTCGCACCTGAACAAG
CTCGTCCGGGTGGTCGGCGTGGTGACGCGCCGCACGCAGGTATTCCCCCA
GATCCAGAGCGTCACGTTCGATTGTGCGAATTGCAAAAGTTCAGTTGGGC
CTTTCAAGCAAACAGAGGGAGCGGAGATCCGGCCGGAGATGTGCACAGTG
TGTGACCGTACGGGCACCTTTAGGATCAACCAGGCGGCGACTGTGTACAG
GTAAGCCTCCCGCCCTCCCTCCCTTCCCTCCTCCCTCCTGTTGTCCTACT
AAAACATCTGATTCCCACCCTCCACAGAGACTATCAAAAGATCGTCCTGC
AGGAATCCCCCGGCACCGTTCCCGCGGGCCGAGTGCCCCGCTATAAGGAG
GTCATCCTCACTGCCGATCTCATCGACCGCGCCCGGCCCGGGGAGGACAT
CGAAGTGACGGGCATATACAAATACAGGGCAGAGGGCCTGAATGGGAAGC
AAAAGGGGGGATTCCCTGTCTTCAGCACGTGTATTGATGCAAACTTCATT
CATAAACGGGAGGATCTGTTCTCTATGTTTCACATCACGGATGACGATAA
GGCGGACATCCACCGCATCGCCGCGGCGCCCAACACGTCCGAGCTCTTGA
TCAGGTACGGACCATGCCCTCCTTCCCTCCTTTCATCCATTCCTCCCCTC
TCTCCCTCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTC
TTGAACGAGACGCATTATTCTCGATAAGTTTGTACCGCCAACCACCAGTA
CCTCACCCTCCCTCCGTCCCTCCTTCTCTCCATTCCTCCCTCCCAAGCGC
CTTCGCCCCCTCCATCCACGGCCACGAGAAAGTCAAGCTCGCCCTCCTCC
TTGCCCTCTTCTCCGGCGTCGAGAAGAACATCTACAACAAGCACCGCATC
CGTGGCGATATCAACGTCCTTCTACTCGGAGACCCCGGCACGGCCAAAAG
CCAATTTCTCAAATACCTGGAAAAGGTGGCCCCGCGCGCTGCGTACACCA
CAGGTACGTTTGGAGGGAGGGGCGACAAGCAAGGGATGGAAAAAGGGAGG
AAAAGAGAGAGGGAGAGAGAGGGTGTAAATAAGAGTGCTTACCCATTCAC
CTGCCCACATCGCCACCCCCTCCCTCCCCTCCCTTCCCTCCCTCCCTCCA
GGCAAGGGAGCTAGTGCGGTCGGACTGACGGCGGGGGTGCACAAGGACCC
CATGACAAAGGAATGGACTTTGGAGGGGGGGGCGTTGGTGCTGGCGGACA
GGGGCATGTGCTTGATCGACGAGTTCGACAAGATGAACGATGGCGACCGA
ACATCCATCCACGAGGCGCTTGAGCAGCAATCCATCTCCGTGTCCAAGGC
CGGGATTGTGACGAGCCTCCAAGCGCGGTGCTCGGTCGTCGCGGCCGCCA
ACCCAATAGGGGGAAGGTATGACTCCTCTCTGACCTTCGCGGAGAATGTG
GAGCTGACCGATCCGATCCTGCAGCGGTTGGATATGCTGTGTGTGCTGCA
AGGTACGCTGCTCTCTCCCTCCTATCTTCCCTTTCCCTCTTCCCAACCCC
CCTTCTTCCGCCTCTATCCAATTATCCACCAGATATCGTCGACCCCATCG
CCGACGAGCGCCTTGCGGACTTTGTCGTTCGTTCCCACCAACGCTCGCAC
CCGTCCCAGGCCGTTGCAGGCGGGATAGGCACCGAACACGAGACCAACCC
CGAGACGGCCGCCCTGGCTGCGGAGGGGGGCGTGACAACAGTCTCTCAAC
GATTGTTTACCAAGTACATCATGTATGCGCGATCAAATGTGAGGCCTCAG
ATCCAGGACGTGGATCAGGATAAGATTGAAAGGCTTTACGTGGACTTGCG
CCGGGAGAGCAAGCAATGTGGAGGGGTTCCGATCGCCGTCCGGCATATCG
AGTCTATCATTCGCATGTCCGAAGCCCATGCCAAGATGCACTTGCGCGAC
CACGTCCGGGACGACGACGTTAATGTCGCCATCGGCTTGATGCTTCACTC
CTTCTTGCAAGCCCAAAAATTCTCCGTGCGAACTTCCCTTGAGCGGGGCT
TCCGGCGGTATATCACCCGCGTGACGGACTTCAACCAGCTGCTCATGTCG
GAGCTCCAAAAGTTGATGAAAGACAACCTCACCTATAACCTCATGCGGCG
TGCCCGAGGCCCCGAGGAGGAAGAACCTGTCCTCGAGGTGCCTCTGAGTG
AGCTGGAGGAGCGGGCGGCCGAGCTCAGAATATACGACATACGGCCTTTC
TTGCAGGGGGAGATGTTCAAGGGGCAGGGGCTGGTGGTGGAGACGCTGGT
GGGGCGGCAAGGTGCCGTTAAAATGATCAGGAAGGTGAAATAATGGCGGA
GGGGAGGAGGGAGGGACCCTGGACAGAGGGAGACGAAAGGACGTGGTAGA
GACGGAGAGAGGGGGGATGGTTCGACAGGGGCAAGAGGAAGGTAACAAAG
CAATCTGCAAGGGCGAGTACAAAAAAGGAAGGGGAACTTGAAATCTAATG
CGAGTGGGAAAAGGGCAAGAGGCTATCCAGAACAAGGCCGCTTGCAAGGC
TGAGTGTGAATGCGGATCTCTACCTCCCTCTGTGCGCATTAATCTTGTCG
CCGGTCGGGTGGGCCAGAGGTCTATGTCCATTTGAGGAGGAAGCATCAAA
AATCAGCTGTGGAAGAGGAAAGATTAGAGGGAGCACAACTACAGACGAAA
TCAAGAAGGAGAAGCTAATCAGAGGCACCACGATGTCAAACTTGCCGGAT
GAAGAGACATGAGACACCATCACAACCAACAGGTAGTGTAGGTAAAGAGC
AGCCGCCGAAAAAATGGGATAAAACGACACATGTATGTCATA

Coding sequence (CDS) from alignment at chr22:278980..283621+

>NO22G00890.1 ID=NO22G00890.1|Name=NO22G00890.1|organism=Nannochloropsis oceanica|type=CDS|length=2814bp|location=Sequence derived from alignment at chr22:278980..283621+ (Nannochloropsis oceanica)
ATGAGCACTACTGGCGGTGGTGGCGACGGTGGCGGTGATGGCAGCGAGTC
CAACAAGCGTCGACGGGTCTTGCTGGATTCGGACGACGAAGAAGACATGG
CCCCCGCGCCGCCTCCCCCTCCTCCTCCTCTATCCCCCCTCCCTGGCCTC
GATGACCGGCACGACGACGGTTCGGATTTGGAGGAGGTGGTAGAGGAGGA
AGGGATCGAAGACGAGCGGTTGACGGACAATGACGAGGATGGCGCGGCGG
CTGGGTTGAGCGATGAAGACGGGGAGGACTTGATGGAGAATATGGAGGCG
GATTACGTAGCCATCCCTGAGCTCGATACGTACGATATGGGTAATTTGGA
CCAACGCGAGTATGGTGCGATGGATTTCGATGCACGACGGGCGGCAGAGG
TGGAGATTGCGGAGAGAACGGAGCAGAGGGGGAGGCTTGATGACATTCTG
GATCGCTATGGTGATGAGGATGAGGAGGCAAGGGATAGAAGGAGGGGGGC
ATTCGATCAGAGGAGGGCACAGGAGGGGATGATGGGGTTGGACGGGAGCT
TGGAGGTGGAAGATGAGGATTTGAATTTGGAGGCATATGACGTGCCGTTG
AGGGAGTGGATAGCCGAGGACCGGACCAGGAGAGAGGTGAAGAGGCGGTT
TCGATCTTTGTTGGAAGAAAGTAAGGATGGAAATGGACGGTTAAGGTACA
TGGACAGCATTCGGAACATGTGCGCGGCAAATTTGAGAAGTTTGGAGGTG
CATTATGAGGTGTTGAGGCAGGAGCAGGCGACCTTGGCCTTGTGGTTGAT
GGATGCCCCGGAAGATATACTAGAGGTCTTCGACGAGGTGGCTAACGAGG
TTGTTTTAAAGCACTACAAGCACTATAAAACCATGCTCCGCGACGAGGTC
CACGTCCGCATTGTTGGGCACGAGATAGTGCTATCCCTCCGTCTCCTGCG
CCAGTCGCACCTGAACAAGCTCGTCCGGGTGGTCGGCGTGGTGACGCGCC
GCACGCAGGTATTCCCCCAGATCCAGAGCGTCACGTTCGATTGTGCGAAT
TGCAAAAGTTCAGTTGGGCCTTTCAAGCAAACAGAGGGAGCGGAGATCCG
GCCGGAGATGTGCACAGTGTGTGACCGTACGGGCACCTTTAGGATCAACC
AGGCGGCGACTGTGTACAGAGACTATCAAAAGATCGTCCTGCAGGAATCC
CCCGGCACCGTTCCCGCGGGCCGAGTGCCCCGCTATAAGGAGGTCATCCT
CACTGCCGATCTCATCGACCGCGCCCGGCCCGGGGAGGACATCGAAGTGA
CGGGCATATACAAATACAGGGCAGAGGGCCTGAATGGGAAGCAAAAGGGG
GGATTCCCTGTCTTCAGCACGTGTATTGATGCAAACTTCATTCATAAACG
GGAGGATCTGTTCTCTATGTTTCACATCACGGATGACGATAAGGCGGACA
TCCACCGCATCGCCGCGGCGCCCAACACGTCCGAGCTCTTGATCAGCGCC
TTCGCCCCCTCCATCCACGGCCACGAGAAAGTCAAGCTCGCCCTCCTCCT
TGCCCTCTTCTCCGGCGTCGAGAAGAACATCTACAACAAGCACCGCATCC
GTGGCGATATCAACGTCCTTCTACTCGGAGACCCCGGCACGGCCAAAAGC
CAATTTCTCAAATACCTGGAAAAGGTGGCCCCGCGCGCTGCGTACACCAC
AGGCAAGGGAGCTAGTGCGGTCGGACTGACGGCGGGGGTGCACAAGGACC
CCATGACAAAGGAATGGACTTTGGAGGGGGGGGCGTTGGTGCTGGCGGAC
AGGGGCATGTGCTTGATCGACGAGTTCGACAAGATGAACGATGGCGACCG
AACATCCATCCACGAGGCGCTTGAGCAGCAATCCATCTCCGTGTCCAAGG
CCGGGATTGTGACGAGCCTCCAAGCGCGGTGCTCGGTCGTCGCGGCCGCC
AACCCAATAGGGGGAAGGTATGACTCCTCTCTGACCTTCGCGGAGAATGT
GGAGCTGACCGATCCGATCCTGCAGCGGTTGGATATGCTGTGTGTGCTGC
AAGATATCGTCGACCCCATCGCCGACGAGCGCCTTGCGGACTTTGTCGTT
CGTTCCCACCAACGCTCGCACCCGTCCCAGGCCGTTGCAGGCGGGATAGG
CACCGAACACGAGACCAACCCCGAGACGGCCGCCCTGGCTGCGGAGGGGG
GCGTGACAACAGTCTCTCAACGATTGTTTACCAAGTACATCATGTATGCG
CGATCAAATGTGAGGCCTCAGATCCAGGACGTGGATCAGGATAAGATTGA
AAGGCTTTACGTGGACTTGCGCCGGGAGAGCAAGCAATGTGGAGGGGTTC
CGATCGCCGTCCGGCATATCGAGTCTATCATTCGCATGTCCGAAGCCCAT
GCCAAGATGCACTTGCGCGACCACGTCCGGGACGACGACGTTAATGTCGC
CATCGGCTTGATGCTTCACTCCTTCTTGCAAGCCCAAAAATTCTCCGTGC
GAACTTCCCTTGAGCGGGGCTTCCGGCGGTATATCACCCGCGTGACGGAC
TTCAACCAGCTGCTCATGTCGGAGCTCCAAAAGTTGATGAAAGACAACCT
CACCTATAACCTCATGCGGCGTGCCCGAGGCCCCGAGGAGGAAGAACCTG
TCCTCGAGGTGCCTCTGAGTGAGCTGGAGGAGCGGGCGGCCGAGCTCAGA
ATATACGACATACGGCCTTTCTTGCAGGGGGAGATGTTCAAGGGGCAGGG
GCTGGTGGTGGAGACGCTGGTGGGGCGGCAAGGTGCCGTTAAAATGATCA
GGAAGGTGAAATAA

Synonyms

Publications