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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr4 | genome | chr4:62498..64665 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO04G00140.2 ID=NO04G00140.2|Name=NO04G00140.2|organism=Nannochloropsis oceanica|type=mRNA|length=1743bp ACAGCTATGCCCGATGCCACCGCCAACCCCCAAAGATGAGGTCAAGTACT GCCCGCAGCACGTATCCCTGCAAGCTTTCCCGGCCTTGTCTTCTTCCTCT TCCTCCTGTTGTTGCTTCTCCTGCTCCTCATCCTCCTGCTCCTCCTCTAC TTGTCACTCTCAAGCCAACGTCGCCGCCAATAGTAGTACTTCATCATCAC ATGAGGCATCGGCTTGGAAATATAAGGTCGTACGAGGCTCTCTGTATGTC GTGGGCCCTGCAATCGAGACCTTAGCCGAGGCAGGACATGCATACTGCAT GGACCATACTACCAGTGCCGCTGCGGCGCCTGCTTGTGATATTATGCCGT CCCTAATACAAGCTGAAGACATAGCCTTCTTTGCTGATGCACGGAGACGT CGTGCACAGCGCGATGGCCCCGCCCACCATCTCACGCTCCTGCACCGAAC CGAAATTCAGGCGGAGGGTGAGAAGGAGGCCGGAATCGAGGACTGTGGAG GGAGAGACAGAGACGACAATACAGCAAGTGCTGTTGATACTCCTGCTCCT ACTCCTACTTCACCTACATCTACGGGCGCTTCCATTCCGTGCAAGCCCGA GAGGAAAAAGAGGGTGGACGAAAATGAGCTGCTCTCGTCAGCTCCCTCTC GGCGTAGCTCCCACGCCACCACCATGCCCGAGGACAAGGCCAAGGGCGAC GAGAAAGAGACCCAGGAGCAAGAGGGGACGAAGATAATGAGAAAAGGAGC AGATCCATACAACAGTACGGAAGGGGTGCCACGTTCGTTTTCTTCCCCTT CCTCTTCCATGGACCGCTACAAGGACGACGACAAAGACGAGGCGTTCGCT TCCGCCCTGCTTGCCATGTTGACCCTTCTCCTGAACACAAACCTCCTCCC TCACATACCTCCCCTCCTATATGACCCTCTACCTCTTTATGTCTACCGGA CAAGTGGGGAGGGGCGAGCGCTGGCGATGTCGGTCCTGTTCTTGCCGGGG GAGTGGCTTCGGTATTGGCAAGGGCGGGTAAGGAGGGGAGGAAGAAAGGC ATATCATCCCTTGCACGTAACCCTGGGCTTTGAGAGGCAGGACGAGCGGG ACCAAGAGGCGCGGCGCTGGGGGCGGGTCCGTGTGCTGGGATATGGTTTG TCAAGGCGGAGGACGGCAGAGGTTTTGGAGGCATTGGTAAATGTGCTCGT GAAAGGAGAAGGAGAAGGAGAAGGGAGGAAAGGAGGACAATTGGGTACTT TTCTTCCTCGGGTTCGAGATTTGGCGGTTGAGGTCATGCGTGTGCTGGAA AGGAGGATAGAGGGAAGAACGGAGGGCGGTCGGGAGAATGAGGAGGAGAA TGAGGAGGAGGTGGAAGAGGAGGAGGAGGAAGTGAGGGAGATCACGGCCA CACTCACGGCCTGCAGGCGGATACTTGATTCTATGGCGGGCGGGTCGGCG TCGGGTTTGTGTTGGCAAGGGAAAGAGGAGGAGAAAGAGACACCTTTACC GTTGGAGCTTGCGACAGGTGGGTCGTCGCTTGTCAGATATGCAGCTCGAG GACGTGGGTGCCTTTGAGAGCAGCAGCTGGATCGCTACCAAGGCACCCAG ATGGGCGTATATGTAATAAGACTGACGAGGAGGGAGAGAGGTAGGCCCTG GAAATTGTGCCTGTTCACATATCAAGTAGCCATGAGAGATGGAGACCCCT GCCGGCCTTCAAACCACAACACAAGGAAGCACACCAACCGACG back to topprotein sequence of NO04G00140.2 >NO04G00140.2-protein ID=NO04G00140.2-protein|Name=NO04G00140.2|organism=Nannochloropsis oceanica|type=polypeptide|length=518bp MPPPTPKDEVKYCPQHVSLQAFPALSSSSSSCCCFSCSSSSCSSSTCHSQ ANVAANSSTSSSHEASAWKYKVVRGSLYVVGPAIETLAEAGHAYCMDHTT SAAAAPACDIMPSLIQAEDIAFFADARRRRAQRDGPAHHLTLLHRTEIQA EGEKEAGIEDCGGRDRDDNTASAVDTPAPTPTSPTSTGASIPCKPERKKR VDENELLSSAPSRRSSHATTMPEDKAKGDEKETQEQEGTKIMRKGADPYN STEGVPRSFSSPSSSMDRYKDDDKDEAFASALLAMLTLLLNTNLLPHIPP LLYDPLPLYVYRTSGEGRALAMSVLFLPGEWLRYWQGRVRRGGRKAYHPL HVTLGFERQDERDQEARRWGRVRVLGYGLSRRRTAEVLEALVNVLVKGEG EGEGRKGGQLGTFLPRVRDLAVEVMRVLERRIEGRTEGGRENEEENEEEV EEEEEEVREITATLTACRRILDSMAGGSASGLCWQGKEEEKETPLPLELA TGGSSLVRYAARGRGCL* back to topmRNA from alignment at chr4:62498..64665+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO04G00140.2 ID=NO04G00140.2|Name=NO04G00140.2|organism=Nannochloropsis oceanica|type=mRNA|length=2168bp|location=Sequence derived from alignment at chr4:62498..64665+ (Nannochloropsis oceanica) ACAGCTATGCCCGATGCCACCGCCAACCCCCAAAGATGAGGTCAAGTACT
GCCCGCAGCACGTATCCCTGCAAGCTTTCCCGGCCTTGTCTTCTTCCTCT
TCCTCCTGTTGTTGCTTCTCCTGCTCCTCATCCTCCTGCTCCTCCTCTAC
TTGTCACTCTCAAGCCAACGTCGCCGCCAATAGTAGTACTTCATCATCAC
ATGAGGCATCGGCTTGGAAATATAAGGTCGTACGAGGCTCTCTGTATGTC
GTGGGCCCTGCAATCGAGACCTTAGCCGAGGCAGGACATGCATACTGCAT
GGACCATACTACCAGTGCCGCTGCGGCGCCTGCTTGTGATATTATGCCGT
CCCTAATACAAGGTAGGTGAATGGTTGAAGATGAGAAGATGGACGAGAGA
AGGAAAAAAGTATTTAGTAAACTGTGCCCCCACTTACCACCACTTCATTT
TCTTTGTTCATGACTCTTTCCGTCCCTCATTCGCCTTCCCCCGCCTCGTT
CCCTCCCTCCTTCTCGCACTCGACGTACGTCCCACCCTCTTCAATTCCCC
AGCTGAAGACATAGCCTTCTTTGCTGATGCACGGAGACGTCGTGCACAGC
GCGATGGCCCCGCCCACCATCTCACGCTCCTGCACCGAACCGAAATTCAG
GCGGAGGGTGAGAAGGAGGCCGGAATCGAGGACTGTGGAGGGAGAGACAG
AGACGACAATACAGCAAGTGCTGTTGATACTCCTGCTCCTACTCCTACTT
CACCTACATCTACGGGCGCTTCCATTCCGTGCAAGCCCGAGAGGAAAAAG
AGGGTGGACGAAAATGAGCTGCTCTCGTCAGCTCCCTCTCGGCGTAGCTC
CCACGCCACCACCATGCCCGAGGACAAGGCCAAGGGCGACGAGAAAGAGA
CCCAGGAGCAAGAGGGGACGAAGATAATGAGAAAAGGAGCAGATCCATAC
AACAGTACGGAAGGGGTGCCACGTTCGTTTTCTTCCCCTTCCTCTTCCAT
GGACCGCTACAAGGACGACGACAAAGACGAGGCGTTCGCTTCCGCCCTGC
TTGCCATGTTGACCCTTCTCCTGAACACAAACCTCCTCCCTCACATACCT
CCCCTCCTATATGACCCTCTACCTCTTTATGTCTACCGGACAAGTGGGGA
GGGGCGAGCGCTGGCGATGTCGGTCCTGTTCTTGCCGGGGGAGTGGCTTC
GGTATTGGCAAGGGCGGGTAAGGAGGGGAGGAAGAAAGGTAGGGGGAGGA
CGGGAAGGGGAGGCAAGGGGAGAGAAGGATGCTTCTCTTTACTCTTGTTA
AGTGGCAGACGACTGTAGGGTAGGAGCCGGCGAGGGTGGAAGCAGGATGA
AAATATCTTGCAGAGCAACAGTCACAAGCAGGCGGCGTACGAAGAATTTA
GTAAATGCATACACTCTCCCACCCTTTCTCCCCCCTCTCCTTCCCTCTCG
TCCTCCCTCCCTCCTTTCCTTAGGCATATCATCCCTTGCACGTAACCCTG
GGCTTTGAGAGGCAGGACGAGCGGGACCAAGAGGCGCGGCGCTGGGGGCG
GGTCCGTGTGCTGGGATATGGTTTGTCAAGGCGGAGGACGGCAGAGGTTT
TGGAGGCATTGGTAAATGTGCTCGTGAAAGGAGAAGGAGAAGGAGAAGGG
AGGAAAGGAGGACAATTGGGTACTTTTCTTCCTCGGGTTCGAGATTTGGC
GGTTGAGGTCATGCGTGTGCTGGAAAGGAGGATAGAGGGAAGAACGGAGG
GCGGTCGGGAGAATGAGGAGGAGAATGAGGAGGAGGTGGAAGAGGAGGAG
GAGGAAGTGAGGGAGATCACGGCCACACTCACGGCCTGCAGGCGGATACT
TGATTCTATGGCGGGCGGGTCGGCGTCGGGTTTGTGTTGGCAAGGGAAAG
AGGAGGAGAAAGAGACACCTTTACCGTTGGAGCTTGCGACAGGTGGGTCG
TCGCTTGTCAGATATGCAGCTCGAGGACGTGGGTGCCTTTGAGAGCAGCA
GCTGGATCGCTACCAAGGCACCCAGATGGGCGTATATGTAATAAGACTGA
CGAGGAGGGAGAGAGGTAGGCCCTGGAAATTGTGCCTGTTCACATATCAA
GTAGCCATGAGAGATGGAGACCCCTGCCGGCCTTCAAACCACAACACAAG
GAAGCACACCAACCGACG back to topCoding sequence (CDS) from alignment at chr4:62498..64665+ >NO04G00140.2 ID=NO04G00140.2|Name=NO04G00140.2|organism=Nannochloropsis oceanica|type=CDS|length=1554bp|location=Sequence derived from alignment at chr4:62498..64665+ (Nannochloropsis oceanica) ATGCCACCGCCAACCCCCAAAGATGAGGTCAAGTACTGCCCGCAGCACGT ATCCCTGCAAGCTTTCCCGGCCTTGTCTTCTTCCTCTTCCTCCTGTTGTT GCTTCTCCTGCTCCTCATCCTCCTGCTCCTCCTCTACTTGTCACTCTCAA GCCAACGTCGCCGCCAATAGTAGTACTTCATCATCACATGAGGCATCGGC TTGGAAATATAAGGTCGTACGAGGCTCTCTGTATGTCGTGGGCCCTGCAA TCGAGACCTTAGCCGAGGCAGGACATGCATACTGCATGGACCATACTACC AGTGCCGCTGCGGCGCCTGCTTGTGATATTATGCCGTCCCTAATACAAGC TGAAGACATAGCCTTCTTTGCTGATGCACGGAGACGTCGTGCACAGCGCG ATGGCCCCGCCCACCATCTCACGCTCCTGCACCGAACCGAAATTCAGGCG GAGGGTGAGAAGGAGGCCGGAATCGAGGACTGTGGAGGGAGAGACAGAGA CGACAATACAGCAAGTGCTGTTGATACTCCTGCTCCTACTCCTACTTCAC CTACATCTACGGGCGCTTCCATTCCGTGCAAGCCCGAGAGGAAAAAGAGG GTGGACGAAAATGAGCTGCTCTCGTCAGCTCCCTCTCGGCGTAGCTCCCA CGCCACCACCATGCCCGAGGACAAGGCCAAGGGCGACGAGAAAGAGACCC AGGAGCAAGAGGGGACGAAGATAATGAGAAAAGGAGCAGATCCATACAAC AGTACGGAAGGGGTGCCACGTTCGTTTTCTTCCCCTTCCTCTTCCATGGA CCGCTACAAGGACGACGACAAAGACGAGGCGTTCGCTTCCGCCCTGCTTG CCATGTTGACCCTTCTCCTGAACACAAACCTCCTCCCTCACATACCTCCC CTCCTATATGACCCTCTACCTCTTTATGTCTACCGGACAAGTGGGGAGGG GCGAGCGCTGGCGATGTCGGTCCTGTTCTTGCCGGGGGAGTGGCTTCGGT ATTGGCAAGGGCGGGTAAGGAGGGGAGGAAGAAAGGCATATCATCCCTTG CACGTAACCCTGGGCTTTGAGAGGCAGGACGAGCGGGACCAAGAGGCGCG GCGCTGGGGGCGGGTCCGTGTGCTGGGATATGGTTTGTCAAGGCGGAGGA CGGCAGAGGTTTTGGAGGCATTGGTAAATGTGCTCGTGAAAGGAGAAGGA GAAGGAGAAGGGAGGAAAGGAGGACAATTGGGTACTTTTCTTCCTCGGGT TCGAGATTTGGCGGTTGAGGTCATGCGTGTGCTGGAAAGGAGGATAGAGG GAAGAACGGAGGGCGGTCGGGAGAATGAGGAGGAGAATGAGGAGGAGGTG GAAGAGGAGGAGGAGGAAGTGAGGGAGATCACGGCCACACTCACGGCCTG CAGGCGGATACTTGATTCTATGGCGGGCGGGTCGGCGTCGGGTTTGTGTT GGCAAGGGAAAGAGGAGGAGAAAGAGACACCTTTACCGTTGGAGCTTGCG ACAGGTGGGTCGTCGCTTGTCAGATATGCAGCTCGAGGACGTGGGTGCCT TTGA back to top
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