NO03G00470.1, NO03G00470.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO03G00470.1
Unique NameNO03G00470.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length297
Alignment locationchr3:146770..147546 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:146770..147546 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G00470.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00470NO03G00470Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO03G00470.1NO03G00470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO03G00470.1.cds1NO03G00470.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G00470.1.cds2NO03G00470.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO03G00470.1 ID=NO03G00470.1|Name=NO03G00470.1|organism=Nannochloropsis oceanica|type=mRNA|length=297bp
ATGCATTCCAGATCCAGGCCTCCCTCATCCCTAACGCCCTGCCTATCCCC
CCCGTCACCACAGCACAACCAGAAAGAGGAAATTAGAAAGATGCAGCCGG
ACCATCAGCCGCAACAACCACAACAAGAGCCAGCCTCTCCAACCCCCATG
CCTCAAGCCGCAAGCCGTGTCAACCCCTCCCCTTCGTCCTCCTCCCCTCC
CTCCTCCCAGCAGCCCAAGGGCATCTCTCCTTCACGCACCTCTCCCTTCA
AACAAGGGCTTTCCCCTTTGAAGATGCCTAAGCCCATGAAGTTGTAA
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protein sequence of NO03G00470.1

>NO03G00470.1-protein ID=NO03G00470.1-protein|Name=NO03G00470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=99bp
MHSRSRPPSSLTPCLSPPSPQHNQKEEIRKMQPDHQPQQPQQEPASPTPM
PQAASRVNPSPSSSSPPSSQQPKGISPSRTSPFKQGLSPLKMPKPMKL*
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mRNA from alignment at chr3:146770..147546-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO03G00470.1 ID=NO03G00470.1|Name=NO03G00470.1|organism=Nannochloropsis oceanica|type=mRNA|length=777bp|location=Sequence derived from alignment at chr3:146770..147546- (Nannochloropsis oceanica)
ATGCATTCCAGATCCAGGCCTCCCTCATCCCTAACGCCCTGCCTATCCCC
CCCGTCACCACAGCACAACCAGAAAGAGGAAATTAGAAAGATGCAGCCGG
ACCATCAGGTACGTGTGTGCGAGGATGGGAGGGTCAGGGAGGGAGGGATA
GGGAGGATCCACAGATACCCCGCTGCATGTGCGCTGTGTTCCCACCGAAG
AGGCATTGTGCATGCGCTTCATGAGCGCTCACCTTTACATGTCACGGGTG
CCGAACTCGAATTAGAGCGGTCCAAATAGGGTTATGCGGTCTCGACCGAG
GCTGGGTCTCTTGACGTCTTTGACATCTGCGATAGATGGAGGAACGAGAG
GAACAAATGAAAATTTGGACTGTCTTTAAACCACGACAGAGAGAGATAAG
GACAGCATGAGGCGTATAGATGCTTATGTCTCCTCTCTTGCCTCATAACG
CACTGCACTGTCTGAAGGGACAGAGGGAGGGTACCACAAGATTGCCATAA
CTAGGTGTACTACGACCCGCCCCGCTCGGTTCTAACTTCCTTTCTTCCGC
CCTCCCTCCCGCCCTCCCTCCTTCCCTCCTTCCTTTAGCCGCAACAACCA
CAACAAGAGCCAGCCTCTCCAACCCCCATGCCTCAAGCCGCAAGCCGTGT
CAACCCCTCCCCTTCGTCCTCCTCCCCTCCCTCCTCCCAGCAGCCCAAGG
GCATCTCTCCTTCACGCACCTCTCCCTTCAAACAAGGGCTTTCCCCTTTG
AAGATGCCTAAGCCCATGAAGTTGTAA
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Coding sequence (CDS) from alignment at chr3:146770..147546-

>NO03G00470.1 ID=NO03G00470.1|Name=NO03G00470.1|organism=Nannochloropsis oceanica|type=CDS|length=297bp|location=Sequence derived from alignment at chr3:146770..147546- (Nannochloropsis oceanica)
ATGCATTCCAGATCCAGGCCTCCCTCATCCCTAACGCCCTGCCTATCCCC
CCCGTCACCACAGCACAACCAGAAAGAGGAAATTAGAAAGATGCAGCCGG
ACCATCAGCCGCAACAACCACAACAAGAGCCAGCCTCTCCAACCCCCATG
CCTCAAGCCGCAAGCCGTGTCAACCCCTCCCCTTCGTCCTCCTCCCCTCC
CTCCTCCCAGCAGCCCAAGGGCATCTCTCCTTCACGCACCTCTCCCTTCA
AACAAGGGCTTTCCCCTTTGAAGATGCCTAAGCCCATGAAGTTGTAA
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Synonyms
Publications