NO16G01570, NO16G01570 (gene) Nannochloropsis oceanica

Overview
NameNO16G01570
Unique NameNO16G01570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1080
Alignment locationchr16:474490..475569 +

Link to JBrowse

Properties
Property NameValue
DescriptionStearoyl-desaturase 5
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:474490..475569 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0055114oxidation-reduction process
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016717oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR005804Fatty_acid_desaturase-1
IPR015876Fatty_acid_desaturase-1_core
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO16G01570 vs. NCBI_GenBank
Match: BAO42834.1 (delta-9 acyl-CoA desaturase [Fistulifera solaris])

HSP 1 Score: 426.8 bits (1096), Expect = 6.700e-116
Identity = 199/300 (66.33%), Postives = 231/300 (77.00%), Query Frame = 0
Query:   11 SALVYHFKEGNLNWPMIIYLVLVHLAGYIGLTTILACKWQTLLEAFILWPITGLGITAGVHRLWAHRSYNATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVASRFWGEAFWNAFWVAGALRYMLVLHFTWMVNSAAHLYGDHPYDPTMWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISQQFNPTKAFIDFFAAIGMVTNRKRATGAWAKLKESRARDAANG 311
            S + YH KEGN+NW M I+ +L+H     GLT I  CK +TLL AF+LWP+TG GIT GVHRLW+HRSY A    R++LML NS+ANQ SIYHWSRDHRVHHK+SET ADPHNATRGFFF+H+GWL++KK   VVE GK +DFSDL  DPVVRFQ   DP F QFMCFV+P+  A+ FWGE  W AF VAG +RY+ V H T++VNSAAHLYGDHPYD   +PAENP+VS  AIGEGWHNWHH+YPYDYA SEFGIS QFNP+K  ID  AA+G+V NRKR T AW+  K  R RDAA G
Sbjct:   13 SVVWYHLKEGNVNWTMTIWSILMHTLTLKGLTVIPQCKPETLLFAFLLWPMTGFGITVGVHRLWSHRSYEAHFIVRVVLMLVNSMANQTSIYHWSRDHRVHHKHSETTADPHNATRGFFFSHIGWLLLKKDRAVVEAGKDMDFSDLLEDPVVRFQHMLDPIFPQFMCFVVPSYTANYFWGEDLWKAFLVAGCVRYIWVKHCTFLVNSAAHLYGDHPYDTASYPAENPVVSWFAIGEGWHNWHHKYPYDYACSEFGISSQFNPSKLLIDALAAVGLVWNRKRGTAAWSHGKARRDRDAAAG 312          
BLAST of NO16G01570 vs. NCBI_GenBank
Match: OEU16164.1 (delta-9-desaturase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 412.5 bits (1059), Expect = 1.300e-111
Identity = 189/302 (62.58%), Postives = 230/302 (76.16%), Query Frame = 0
Query:    3 FQLARDSVSALVYHFKEGNLNWPMIIYLVLVHLAGYIGLTTILACKWQTLLEAFILWPITGLGITAGVHRLWAHRSYNATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVASRFWGEAFWNAFWVAGALRYMLVLHFTWMVNSAAHLYGDHPYDPTMWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISQQFNPTKAFIDFFAAIGMVTNRKRATGAWAKLKESRA 305
            F++  +  S + +H   G +NWPM  Y+  VH+ G +GLT ++  K +TLL AF+LWPI+GLGIT G HRLW+HRS+ A+ P R+ LML NSIA Q +IY W RDHRVHHK+SET+ADPHNATRGFFFAH+GWL +KKHP V++ GK +D  DL  DPVV FQ+  DP    FMCFV+PA VA +FWGE+FW AF+VAGALRY+ VLH T +VNSAAHLYGDHPY+ T  P+ENP+VS  AIGEGWHNWHHRYP+DYAASE GIS Q+NP+K FID  AA+G+V  RKR T  W   KE RA
Sbjct:    5 FKMISEIPSLIKHHHNAGTINWPMSRYVTAVHIMGLVGLTKVMDVKRETLLLAFLLWPISGLGITVGAHRLWSHRSFTASFPVRVFLMLCNSIACQQTIYKWVRDHRVHHKHSETNADPHNATRGFFFAHLGWLYLKKHPDVIKAGKLIDMKDLQEDPVVMFQKRLDPVLNLFMCFVLPAQVAVKFWGESFWPAFFVAGALRYIFVLHCTALVNSAAHLYGDHPYENT-HPSENPIVSFFAIGEGWHNWHHRYPFDYAASELGISSQYNPSKIFIDMLAAVGLVWGRKRGTAMWNITKERRA 305          
BLAST of NO16G01570 vs. NCBI_GenBank
Match: EJK47867.1 (hypothetical protein THAOC_33388 [Thalassiosira oceanica])

HSP 1 Score: 405.6 bits (1041), Expect = 1.600e-109
Identity = 180/255 (70.59%), Postives = 206/255 (80.78%), Query Frame = 0
Query:   56 FILWPITGLGITAGVHRLWAHRSYNATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVASRFWGEAFWNAFWVAGALRYMLVLHFTWMVNSAAHLYGDHPYDPTMWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISQQFNPTKAFIDFFAAIGMVTNRKRATGAWAKLKESRARDAANG 311
            F L  ++G GIT GVHRLW+HRSY+A  P R  LML NSIANQGSI+HW+RDHRVHHKYSETDADPHNA RGFFFAH+GWL VKKHP+V+  G++LDFSDL  DPVV FQ+  DPWFA +MCFV PA +A +FWGE FW AF+VAGALRYM+VLHFTW VNSAAHLYGDHPYD   +P+ENP VS  A+GEGWHNWHH+YP+DYAASEFGIS QFNP+K FID  A +G+V  RKR T AW   +E R RD  NG
Sbjct:  136 FALIRLSGFGITVGVHRLWSHRSYSAAFPVRFALMLMNSIANQGSIFHWARDHRVHHKYSETDADPHNAMRGFFFAHIGWLYVKKHPEVIRAGQELDFSDLYEDPVVMFQKKLDPWFALYMCFVFPAQIAVKFWGEKFWPAFFVAGALRYMVVLHFTWFVNSAAHLYGDHPYDTASYPSENPYVSYFAVGEGWHNWHHKYPFDYAASEFGISSQFNPSKLFIDMLAPVGLVWGRKRGTAAWNMGRERRERDLKNG 390          
BLAST of NO16G01570 vs. NCBI_GenBank
Match: AEY63638.1 (acyl-CoA desaturase, partial [Isochrysis sp. CCMM5001])

HSP 1 Score: 375.6 bits (963), Expect = 1.800e-100
Identity = 169/275 (61.45%), Postives = 207/275 (75.27%), Query Frame = 0
Query:   26 MIIYLVLVHLAGYIGLTTILACKWQTLLEAFILWPITGLGITAGVHRLWAHRSYNATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVASRFWGEAFWNAFWVAGALRYMLVLHFTWMVNSAAHLYGDHPYDPTMWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISQQFNPTKAFIDFFAAIGMVTNRKRATGAWAKLK 301
            M  Y+ L  + G+IG+  I  CK  TL  AF+LWPI+G GIT G HRLWAHRSY A+  YR ++ML NSIANQG+I+HWSRDHR HH +SET ADPH+A RGF+FAHMGWL +KK P+V E G++++  DL  D +V FQ  +DPW+  F CF MP LVA   WGE FWN F+V G LRY+ VLH TWMVNS AHL+G  PYDP   PAEN LV+++AIGEGWHNWHH+YP+DYAASE+G+  QFNPTK  ID  AA+G+V++RKRAT  WA+ K
Sbjct:   70 MASYITLTQILGFIGIFFIPYCKIATLWWAFVLWPISGFGITGGAHRLWAHRSYKASFAYRAVVMLCNSIANQGTIFHWSRDHRTHHFHSETVADPHDAIRGFWFAHMGWLYLKKDPRVAEAGRKVNVDDLKEDSLVMFQHKYDPWWNFFWCFFMPGLVAQYAWGETFWNGFFVPGCLRYVWVLHCTWMVNSGAHLWGARPYDPQSNPAENRLVAILAIGEGWHNWHHKYPFDYAASEYGVFTQFNPTKLVIDLCAALGLVSDRKRATAMWAREK 344          
BLAST of NO16G01570 vs. NCBI_GenBank
Match: AFB82641.1 (delta-12 oleate desaturase [Isochrysis galbana])

HSP 1 Score: 375.6 bits (963), Expect = 1.800e-100
Identity = 169/275 (61.45%), Postives = 207/275 (75.27%), Query Frame = 0
Query:   26 MIIYLVLVHLAGYIGLTTILACKWQTLLEAFILWPITGLGITAGVHRLWAHRSYNATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVASRFWGEAFWNAFWVAGALRYMLVLHFTWMVNSAAHLYGDHPYDPTMWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISQQFNPTKAFIDFFAAIGMVTNRKRATGAWAKLK 301
            M  Y+ L  + G+IG+  I  CK  TL  AF+LWPI+G GIT G HRLWAHRSY A+  YR ++ML NSIANQG+I+HWSRDHR HH +SET ADPH+A RGF+FAHMGWL +KK P+V E G++++  DL  D +V FQ  +DPW+  F CF MP LVA   WGE FWN F+V G LRY+ VLH TWMVNS AHL+G  PYDP   PAEN LV+++AIGEGWHNWHH+YP+DYAASE+G+  QFNPTK  ID  AA+G+V++RKRAT  WA+ K
Sbjct:   51 MASYITLTQILGFIGIFFIPYCKIATLWWAFVLWPISGFGITGGAHRLWAHRSYKASFAYRAVVMLCNSIANQGTIFHWSRDHRTHHFHSETVADPHDAIRGFWFAHMGWLYLKKDPRVAEAGRKVNVDDLKEDSLVMFQHKYDPWWNFFWCFFMPGLVAQYAWGETFWNGFFVPGCLRYVWVLHCTWMVNSGAHLWGARPYDPQSNPAENRLVAILAIGEGWHNWHHKYPFDYAASEYGVFTQFNPTKLVIDLCAALGLVSDRKRATAMWAREK 325          
BLAST of NO16G01570 vs. NCBI_GenBank
Match: OEU17710.1 (delta-9-desaturase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 375.6 bits (963), Expect = 1.800e-100
Identity = 172/289 (59.52%), Postives = 216/289 (74.74%), Query Frame = 0
Query:   13 LVYHFKEGNLNWPMIIYLVLVHLAGYIGLTTILACKWQTLLEAFILWPITGLGITAGVHRLWAHRSYNATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVASRFWGEAFWNAFWVAGALRYMLVLHFTWMVNSAAHLYGDHPYDPTMWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISQQFNPTKAFIDFFAAIGMVTNRKRATGAWAKLKE 302
            L +H+KEGN NWP + +  +VH+  ++G+  +  CK ++ L  FILW +TG GIT G HRLWAH+SY A    R LLM+ NSIA QGSIY W+ +HR+HHKYSET+ADPHN+TRGFFFAH+GWL++KKHP  VE   QLD++DL ADP+VR Q   DP+FA     + P LVA   W E+  N+ +V G LRY  VLH T++VNSAAHL+GDHPYD  + PAENP+VS +A GEGWHNWHHRYP+DYAASEFGIS QFNP+K  ID FA +G+V NRKRAT +W + +E
Sbjct:   15 LNHHYKEGNFNWPYMAFFAVVHITAFMGIFKVADCKRESYLFFFILWQLTGYGITCGAHRLWAHKSYEAHFIVRFLLMIGNSIAYQGSIYSWAINHRIHHKYSETNADPHNSTRGFFFAHIGWLLLKKHPDRVEVESQLDYTDLWADPLVRIQHKCDPFFA-VPAILSPCLVACYGWNESVSNSIFVVGCLRYCFVLHVTFLVNSAAHLWGDHPYDSKIAPAENPIVSYLAGGEGWHNWHHRYPFDYAASEFGISSQFNPSKLLIDTFAFLGLVRNRKRATSSWRRYRE 302          
BLAST of NO16G01570 vs. NCBI_GenBank
Match: XP_012199678.1 (hypothetical protein SPRG_05571 [Saprolegnia parasitica CBS 223.65] >KDO29618.1 hypothetical protein SPRG_05571 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 373.2 bits (957), Expect = 8.800e-100
Identity = 173/298 (58.05%), Postives = 220/298 (73.83%), Query Frame = 0
Query:   16 HFKEGNLNWPMIIYLVLVHLAGYIGLTTILACKWQTLLEAFILWPITGLGITAGVHRLWAHRSYNATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVASRFWGEAFWNAFWVAGALRYMLVLHFTWMVNSAAHLYGDHPYDPTMWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISQQFNPTKAFIDFFAAIGMVTNRKRATGAWAKLKESRARDAANGKSM 314
            H+K  N NWPM+IYL   H    + L  I +C WQTLL  FIL   +GLGIT GVHRLWAH+SY A    R  LML NS+ANQG+IYHWSRDHRVHHKYSET+ADPHNA RG FFAH+GWL+VKK PKV+E G +++  DL  D VVR Q+  +PW   FM F+ P LV S FWGE + N   VAG  RY+ +LH TW+VNSAAH YG  PYDP + P EN +V+V++IGEGWHNWHH +PYDYAASE+G++ Q+NPTK FID  A +G+V++RKRA  AW ++K+++  +A++ +++
Sbjct:    7 HYK--NANWPMVIYLGYCHALAVLALGYIGSCSWQTLLFTFILSQFSGLGITGGVHRLWAHKSYKAHGIVRFFLMLCNSVANQGTIYHWSRDHRVHHKYSETEADPHNAKRGMFFAHIGWLLVKKDPKVIEAGNKINCDDLLEDWVVRLQKSLNPWGNLFMSFIFPMLVCSYFWGEHWANGLLVAGFFRYVFILHCTWLVNSAAHFYGATPYDPKIHPTENAIVAVLSIGEGWHNWHHVFPYDYAASEYGVASQYNPTKLFIDTCAKLGLVSDRKRALHAW-EMKKAKMMEASSPETV 301          
BLAST of NO16G01570 vs. NCBI_GenBank
Match: XP_008620952.1 (hypothetical protein SDRG_16516 [Saprolegnia diclina VS20] >EQC25620.1 hypothetical protein SDRG_16516 [Saprolegnia diclina VS20])

HSP 1 Score: 369.4 bits (947), Expect = 1.300e-98
Identity = 173/298 (58.05%), Postives = 218/298 (73.15%), Query Frame = 0
Query:   16 HFKEGNLNWPMIIYLVLVHLAGYIGLTTILACKWQTLLEAFILWPITGLGITAGVHRLWAHRSYNATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVASRFWGEAFWNAFWVAGALRYMLVLHFTWMVNSAAHLYGDHPYDPTMWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISQQFNPTKAFIDFFAAIGMVTNRKRATGAWAKLKESRARDAANGKSM 314
            H+K  N NWPM+IYL   H    + L  I +C WQTLL  F+L   +GLGIT GVHRLWAH+SY A    R  LML NS+ANQG+IYHWSRDHRVHHKYSET+ADPHNA RG FFAH+GWL+VKK PKV+E G +++  DL  D VVR Q+  +PW   FM F+ P LV S F+GE + N   VAG  RY+ +LH TW+VNSAAH YG  PYDP + P EN +V+V++IGEGWHNWHH +PYDYAASEFG+  Q+NPTK FID  A +G+V++RKRA  AW + K+++  +AA+ +++
Sbjct:    7 HYK--NANWPMVIYLGYCHALAVLALRYIGSCSWQTLLFTFVLSQFSGLGITGGVHRLWAHKSYKAHGIVRFFLMLCNSVANQGTIYHWSRDHRVHHKYSETEADPHNAKRGMFFAHIGWLLVKKDPKVIEAGNKINCDDLLEDWVVRLQKTLNPWGNLFMSFIFPMLVCSYFFGEHWANGLLVAGFFRYVFILHCTWLVNSAAHFYGATPYDPKIHPTENAIVAVLSIGEGWHNWHHVFPYDYAASEFGVMSQYNPTKLFIDTCAKLGLVSDRKRALHAW-ETKKAKMTEAASHETV 301          
BLAST of NO16G01570 vs. NCBI_GenBank
Match: XP_008607537.1 (stearoyl-CoA desaturase (delta-9 desaturase) [Saprolegnia diclina VS20] >EQC38713.1 stearoyl-CoA desaturase (delta-9 desaturase) [Saprolegnia diclina VS20])

HSP 1 Score: 367.5 bits (942), Expect = 4.800e-98
Identity = 169/311 (54.34%), Postives = 216/311 (69.45%), Query Frame = 0
Query:    9 SVSALVYHFKEGNLNWPMIIYLVLVHLAGYIGLTTILACKWQTLLEAFILWPITGLGITAGVHRLWAHRSYNATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVASRFWGEAFWNAFWVAGALRYMLVLHFTWMVNSAAHLYGDHPYDPTMWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISQQFNPTKAFIDFFAAIGMVTNRKRATGAW----AKLKESRARDAANGKSMKD 316
            S  A+ +     N NWPM+ YL   H    +GL  I  C WQTL   F+L  ++GLGIT G HRLW+HR++ A    R+ LML N +ANQG++YHWSRDHRVHHKYSE++ADPHNA RG FFAH+GWL+VKK PKV+E G ++ + DL     +R+Q   +PW   FM F  P LV   ++GE+ WN   VAG LRY+++LH TW+VNSAAH YG+ PYDP + P EN +V+++AIGEGWHNWHH +PYDYAASEFGI+ Q+NPTK FID  A +G+VTNRKRA  AW    AK +   A D  +G  +K+
Sbjct:   41 STMAIAWKQHIQNANWPMVFYLTFCHALAIVGLVAIPQCSWQTLAFTFVLAELSGLGITGGAHRLWSHRAFKAHWTVRVFLMLCNMVANQGTVYHWSRDHRVHHKYSESEADPHNALRGMFFAHIGWLLVKKDPKVIEAGNKMKYDDLLELFEIRWQMAINPWGNLFMSFGFPMLVCHYWFGESLWNGLMVAGFLRYVVILHCTWLVNSAAHFYGETPYDPKIHPTENAIVALLAIGEGWHNWHHVFPYDYAASEFGIASQYNPTKLFIDICAYVGLVTNRKRALKAWEARRAKRETVDAFDIPDGYELKE 351          
BLAST of NO16G01570 vs. NCBI_GenBank
Match: OQR91924.1 (desaturase delta 9 desaturase [Achlya hypogyna])

HSP 1 Score: 365.5 bits (937), Expect = 1.800e-97
Identity = 167/299 (55.85%), Postives = 212/299 (70.90%), Query Frame = 0
Query:   21 NLNWPMIIYLVLVHLAGYIGLTTILACKWQTLLEAFILWPITGLGITAGVHRLWAHRSYNATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVASRFWGEAFWNAFWVAGALRYMLVLHFTWMVNSAAHLYGDHPYDPTMWPAENPLVSVVAIGEGWHNWHHRYPYDYAASEFGISQQFNPTKAFIDFFAAIGMVTNRKRATGAWAKLKESR----ARDAANGKSMKD 316
            N NWPM++YL   H    +GLT +  C W TL   F+L  ++GLGIT G HRLW+HR++ A    R+ LML N +ANQG++YHWSRDHRVHHKYSET+ADPHNA RG FFAH+GWL+VKK PKV+E G +L + DL     VR+Q   +PW   FMCF  P LV   ++GE+      VAG LRY+++LH TW+VNSAAH YG+ PYDP + P EN +V+++AIGEGWHNWHH +PYDYAASEFGI+ Q+NPTK FID  A +G+VTNRKRA  AW + +  R    A D  +G  +K+
Sbjct:   11 NANWPMVVYLSFCHALAAVGLTLLPECSWATLGFTFVLAELSGLGITGGAHRLWSHRAFKAHWTVRVFLMLCNMVANQGTVYHWSRDHRVHHKYSETEADPHNALRGMFFAHIGWLLVKKDPKVIEAGNKLKYDDLLELFEVRWQMALNPWGNLFMCFGFPMLVCHYYFGESLMTGLLVAGFLRYVIILHCTWLVNSAAHFYGETPYDPNIHPTENAIVALLAIGEGWHNWHHVFPYDYAASEFGIATQYNPTKLFIDICAYVGLVTNRKRALKAWEQKRAKRDFQNALDIPDGYELKE 309          
The following BLAST results are available for this feature:
BLAST of NO16G01570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
BAO42834.16.700e-11666.33delta-9 acyl-CoA desaturase [Fistulifera solaris][more]
OEU16164.11.300e-11162.58delta-9-desaturase [Fragilariopsis cylindrus CCMP1... [more]
EJK47867.11.600e-10970.59hypothetical protein THAOC_33388 [Thalassiosira oc... [more]
AEY63638.11.800e-10061.45acyl-CoA desaturase, partial [Isochrysis sp. CCMM5... [more]
AFB82641.11.800e-10061.45delta-12 oleate desaturase [Isochrysis galbana][more]
OEU17710.11.800e-10059.52delta-9-desaturase [Fragilariopsis cylindrus CCMP1... [more]
XP_012199678.18.800e-10058.05hypothetical protein SPRG_05571 [Saprolegnia paras... [more]
XP_008620952.11.300e-9858.05hypothetical protein SDRG_16516 [Saprolegnia dicli... [more]
XP_008607537.14.800e-9854.34stearoyl-CoA desaturase (delta-9 desaturase) [Sapr... [more]
OQR91924.11.800e-9755.85desaturase delta 9 desaturase [Achlya hypogyna][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003142NSK003142Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G01570.1NO16G01570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593563gene_6039Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100027g27gene6498Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G01570.1NO16G01570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G01570 ID=NO16G01570|Name=NO16G01570|organism=Nannochloropsis oceanica|type=gene|length=1080bp
ATGGTCTTCCAGCTCGCCCGAGACTCTGTCTCGGCCCTGGTCTATCATTT
CAAAGAAGGAAACCTTAACTGGCCTATGATTATCTACCTCGTCCTTGTCC
ACTTGGCGGGCTACATCGGTCTGACTACCATTCTGGCTTGCAAATGGCAA
ACTCTCCTCGAAGCGTTCATCCTATGGCCCATCACCGGGCTGGGGATTAC
TGCCGGCGTACACCGACTTTGGGCACACCGTTCGTACAATGCCACGTTGC
CTTATCGCATCCTGTTGATGTTGTTCAACTCAATTGCGAACCAAGGCAGC
ATCTACCACTGGTCCCGGGACCACCGCGTGCACCACAAGTACTCCGAGAC
TGATGCTGACCCACATAACGCCACCCGTGGCTTCTTCTTCGCGCACATGG
GCTGGCTCATTGTTAAGAAGCACCCCAAGGTCGTCGAAGGGGGGAAGCAA
CTCGATTTCTCCGATTTGGCTGCCGATCCCGTGGTGCGATTCCAGCGTGA
TTGGGATCCGTGGTTCGCCCAGTTTATGTGCTTTGTCATGCCGGCGCTTG
TTGCATCGAGGTTCTGGGGTGAGGCGTTCTGGAACGCCTTTTGGGTGGCG
GGGGCTTTGAGGTATATGTTGGTGCTGCACTTCACCTGGATGGTTAACAG
TGCGGCGCACTTGTATGGCGACCACCCGTACGACCCTACCATGTGGCCGG
CGGAGAACCCGTTGGTATCGGTAGTGGCGATCGGAGAAGGCTGGCATAAC
TGGCACCATCGTTACCCCTACGACTACGCGGCTTCCGAGTTTGGGATTTC
GCAGCAGTTCAACCCGACCAAGGCGTTCATTGATTTTTTTGCGGCCATAG
GGATGGTGACGAACCGAAAACGTGCGACGGGGGCTTGGGCAAAGCTCAAG
GAATCCAGGGCAAGGGATGCGGCGAATGGGAAGAGCATGAAAGATTTCAA
GGGAAGAGGCTCGGGGTCAGACTATGGTACGACAAACACCAATTACGCGG
TGTCGAACAAGACAGTGGTGACCGACAAGGGGGCGCAACAACCAGGGTGG
GAGGAGAGCAATCACCCCAAGTACAACTAA
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protein sequence of NO16G01570.1

>NO16G01570.1-protein ID=NO16G01570.1-protein|Name=NO16G01570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=360bp
MVFQLARDSVSALVYHFKEGNLNWPMIIYLVLVHLAGYIGLTTILACKWQ
TLLEAFILWPITGLGITAGVHRLWAHRSYNATLPYRILLMLFNSIANQGS
IYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQ
LDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVASRFWGEAFWNAFWVA
GALRYMLVLHFTWMVNSAAHLYGDHPYDPTMWPAENPLVSVVAIGEGWHN
WHHRYPYDYAASEFGISQQFNPTKAFIDFFAAIGMVTNRKRATGAWAKLK
ESRARDAANGKSMKDFKGRGSGSDYGTTNTNYAVSNKTVVTDKGAQQPGW
EESNHPKYN*
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Synonyms
Publications