NO10G02500, NO10G02500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G02500 vs. NCBI_GenBank
Match: EWM25346.1 (60s ribosomal protein l44 [Nannochloropsis gaditana]) HSP 1 Score: 205.3 bits (521), Expect = 9.300e-50 Identity = 101/104 (97.12%), Postives = 103/104 (99.04%), Query Frame = 0 Query: 1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKDCKTKKQLVIKRTKHFELGEKKKTSGHQY 105 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECK+CKTKKQLVIKRTKHFELGEKKK +GHQY Sbjct: 1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKECKTKKQLVIKRTKHFELGEKKKATGHQY 104
BLAST of NO10G02500 vs. NCBI_GenBank
Match: XP_008861702.1 (60S ribosomal protein L44 [Aphanomyces invadans] >ETW10291.1 60S ribosomal protein L44 [Aphanomyces invadans]) HSP 1 Score: 182.6 bits (462), Expect = 6.400e-43 Identity = 88/104 (84.62%), Postives = 97/104 (93.27%), Query Frame = 0 Query: 1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKDCKTKKQLVIKRTKHFELGEKKKTSGHQY 105 MV IPKER+TFCKGKKC+KHTVHKVTQYKAGKAS YAQG RRY+ KQQG+GGQTKP+ HKKAKTTKK+TLR+ECK+CK KKQL IKRTKHFELGEKKK+SGHQY Sbjct: 1 MVNIPKERRTFCKGKKCRKHTVHKVTQYKAGKASKYAQGARRYNEKQQGFGGQTKPVFHKKAKTTKKITLRMECKECKAKKQLPIKRTKHFELGEKKKSSGHQY 104
BLAST of NO10G02500 vs. NCBI_GenBank
Match: OQS03635.1 (60S ribosomal protein L44 [Thraustotheca clavata]) HSP 1 Score: 182.2 bits (461), Expect = 8.400e-43 Identity = 88/104 (84.62%), Postives = 96/104 (92.31%), Query Frame = 0 Query: 1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKDCKTKKQLVIKRTKHFELGEKKKTSGHQY 105 MV IPKER+TFCKGKKC+KHT HKVTQYKAGKAS YAQG RRY+ KQQG+GGQTKP+ HKKAKTTKK+TLR+ECK+CKTKKQL IKRTKHFELGEKKKTSGH Y Sbjct: 1 MVNIPKERRTFCKGKKCRKHTTHKVTQYKAGKASKYAQGARRYNEKQQGFGGQTKPVFHKKAKTTKKITLRMECKECKTKKQLPIKRTKHFELGEKKKTSGHTY 104
BLAST of NO10G02500 vs. NCBI_GenBank
Match: XP_008616927.1 (60S ribosomal protein L44 [Saprolegnia diclina VS20] >EQC29623.1 60S ribosomal protein L44 [Saprolegnia diclina VS20] >OQR84387.1 60S ribosomal protein L44 [Achlya hypogyna]) HSP 1 Score: 180.3 bits (456), Expect = 3.200e-42 Identity = 87/104 (83.65%), Postives = 96/104 (92.31%), Query Frame = 0 Query: 1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKDCKTKKQLVIKRTKHFELGEKKKTSGHQY 105 MV IPKER+TFCKGKKC+KHTVHKVTQYKAGKAS +AQG RRY+ KQQG+GGQTKP+ HKKAKTTKK+TLR+ECK+CK KKQL IKRTKHFELGEKKKTSGH Y Sbjct: 1 MVNIPKERRTFCKGKKCRKHTVHKVTQYKAGKASKFAQGARRYNEKQQGFGGQTKPVFHKKAKTTKKITLRMECKECKAKKQLPIKRTKHFELGEKKKTSGHTY 104
BLAST of NO10G02500 vs. NCBI_GenBank
Match: XP_009039505.1 (RL44_PICJA 60S ribosomal protein L44 [Aureococcus anophagefferens] >EGB05663.1 RL44_PICJA 60S ribosomal protein L44 [Aureococcus anophagefferens]) HSP 1 Score: 178.7 bits (452), Expect = 9.300e-42 Identity = 86/104 (82.69%), Postives = 94/104 (90.38%), Query Frame = 0 Query: 1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKDCKTKKQLVIKRTKHFELGEKKKTSGHQY 105 MV +PKERKT+CK KKC+KHT HKVTQYKAGKASN+AQGKRRYD KQ G+GGQTKP+ HKKAKTTKKVTLRLECK+CK KKQL IKR KHFELGEKKKT+GH Y Sbjct: 1 MVNVPKERKTYCKAKKCRKHTTHKVTQYKAGKASNFAQGKRRYDMKQMGFGGQTKPVFHKKAKTTKKVTLRLECKECKAKKQLTIKRCKHFELGEKKKTTGHTY 104
BLAST of NO10G02500 vs. NCBI_GenBank
Match: XP_009538087.1 (hypothetical protein PHYSODRAFT_289114 [Phytophthora sojae] >EGZ06190.1 hypothetical protein PHYSODRAFT_289114 [Phytophthora sojae]) HSP 1 Score: 177.9 bits (450), Expect = 1.600e-41 Identity = 84/104 (80.77%), Postives = 98/104 (94.23%), Query Frame = 0 Query: 1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKDCKTKKQLVIKRTKHFELGEKKKTSGHQY 105 MV +PKER+TFCKGKKC+KHTVHK+TQYKAGKAS YAQG RRY+ KQ+G+GGQTKP+ HKKAKTTKK+TLR+ECK+CKTKKQL +KRTKHFELGEKKK++GHQY Sbjct: 1 MVNMPKERRTFCKGKKCQKHTVHKITQYKAGKASKYAQGARRYNDKQKGFGGQTKPVFHKKAKTTKKITLRMECKECKTKKQLPMKRTKHFELGEKKKSTGHQY 104
BLAST of NO10G02500 vs. NCBI_GenBank
Match: XP_008914558.1 (60S ribosomal protein L44 [Phytophthora parasitica INRA-310] >ETI32166.1 60S ribosomal protein L44 [Phytophthora parasitica P1569] >ETK72541.1 60S ribosomal protein L44 [Phytophthora parasitica] >ETL25996.1 60S ribosomal protein L44 [Phytophthora parasitica] >ETL79205.1 60S ribosomal protein L44 [Phytophthora parasitica] >ETM32452.1 60S ribosomal protein L44 [Phytophthora parasitica] >ETN00194.1 60S ribosomal protein L44 [Phytophthora parasitica INRA-310] >ETO60904.1 60S ribosomal protein L44 [Phytophthora parasitica P1976] >ETP02025.1 60S ribosomal protein L44 [Phytophthora parasitica CJ01A1] >ETP30185.1 60S ribosomal protein L44 [Phytophthora parasitica P10297] >KUF95807.1 60S ribosomal protein L44 [Phytophthora nicotianae] >KUF97950.1 hypothetical protein AM588_10008187 [Phytophthora nicotianae] >OWZ03314.1 60S ribosomal protein L44 [Phytophthora megakarya] >POM77664.1 60S ribosomal protein L44 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 177.9 bits (450), Expect = 1.600e-41 Identity = 84/104 (80.77%), Postives = 98/104 (94.23%), Query Frame = 0 Query: 1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKDCKTKKQLVIKRTKHFELGEKKKTSGHQY 105 MV +PKER+TFCKGKKC+KHTVHK+TQYKAGKAS YAQG RRY+ KQ+G+GGQTKP+ HKKAKTTKK+TLR+ECK+CKTKKQL +KRTKHFELGEKKK++GHQY Sbjct: 1 MVNMPKERRTFCKGKKCQKHTVHKITQYKAGKASKYAQGARRYNDKQKGFGGQTKPVFHKKAKTTKKITLRMECKECKTKKQLPMKRTKHFELGEKKKSAGHQY 104
BLAST of NO10G02500 vs. NCBI_GenBank
Match: XP_009827495.1 (60S ribosomal protein L44 [Aphanomyces astaci] >ETV82824.1 60S ribosomal protein L44 [Aphanomyces astaci]) HSP 1 Score: 177.6 bits (449), Expect = 2.100e-41 Identity = 86/104 (82.69%), Postives = 95/104 (91.35%), Query Frame = 0 Query: 1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKDCKTKKQLVIKRTKHFELGEKKKTSGHQY 105 MV IPKER+TFCK KKC+KHTVHKVTQYKAGKAS +AQG RRY+ KQQG+GGQTKP+ HKKAKTTKK+TLR+ECKDCK KKQL IKRTKHFELGEKKK+SGH Y Sbjct: 1 MVNIPKERRTFCKSKKCRKHTVHKVTQYKAGKASKFAQGARRYNEKQQGFGGQTKPVFHKKAKTTKKITLRMECKDCKAKKQLPIKRTKHFELGEKKKSSGHVY 104
BLAST of NO10G02500 vs. NCBI_GenBank
Match: AFN65682.1 (ribosomal protein L44 [Aurantiochytrium sp. KRS101]) HSP 1 Score: 175.6 bits (444), Expect = 7.900e-41 Identity = 85/104 (81.73%), Postives = 97/104 (93.27%), Query Frame = 0 Query: 1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKDCKTKKQLVIKRTKHFELGEKKKTSGHQY 105 MV +PKER+TFCKGK+C+KHTVHKVTQYKAGKASN+AQGKRRYDRKQ+GYGGQTKPI HKKAKTTKKVTLRLECK+CKTK Q+ +KR K FELG+KK+ +GHQY Sbjct: 1 MVNVPKERRTFCKGKQCRKHTVHKVTQYKAGKASNFAQGKRRYDRKQKGYGGQTKPIFHKKAKTTKKVTLRLECKECKTKCQIGLKRCKTFELGQKKEAAGHQY 104
BLAST of NO10G02500 vs. NCBI_GenBank
Match: XP_002998859.1 (60S ribosomal protein L44 [Phytophthora infestans T30-4] >EEY69005.1 60S ribosomal protein L44 [Phytophthora infestans T30-4]) HSP 1 Score: 174.9 bits (442), Expect = 1.300e-40 Identity = 82/104 (78.85%), Postives = 97/104 (93.27%), Query Frame = 0 Query: 1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKDCKTKKQLVIKRTKHFELGEKKKTSGHQY 105 MV +PKER+T+CKGKKC+KHTVHK+TQYKAGKAS YAQG RRY+ KQ+G+GGQTKP+ HKKAKTTKK+TLR+ECK+CK KKQL +KRTKHFELGEKKK++GHQY Sbjct: 1 MVNMPKERRTYCKGKKCQKHTVHKITQYKAGKASKYAQGARRYNDKQKGFGGQTKPVFHKKAKTTKKITLRMECKECKVKKQLPMKRTKHFELGEKKKSAGHQY 104 The following BLAST results are available for this feature:
BLAST of NO10G02500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G02500 ID=NO10G02500|Name=NO10G02500|organism=Nannochloropsis oceanica|type=gene|length=869bpback to top protein sequence of NO10G02500.1 >NO10G02500.1-protein ID=NO10G02500.1-protein|Name=NO10G02500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=105bpback to top Synonyms
Publications
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