NO10G01940, NO10G01940 (gene) Nannochloropsis oceanica

Overview
NameNO10G01940
Unique NameNO10G01940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2857
Alignment locationchr10:539868..542724 -

Link to JBrowse

Properties
Property NameValue
DescriptionType II pantothenate kinase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:539868..542724 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004594pantothenate kinase activity
GO:0005524ATP binding
GO:0016301kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0015937coenzyme A biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR004567Type_II_PanK
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO10G01940 vs. NCBI_GenBank
Match: EWM25386.1 (Type II pantothenate kinase [Nannochloropsis gaditana])

HSP 1 Score: 867.1 bits (2239), Expect = 4.000e-248
Identity = 480/702 (68.38%), Postives = 527/702 (75.07%), Query Frame = 0
Query:   47 MSYALGPDGKHVDIGAIFGLDVGGTLSKLVYFEQTRKSRKVERTQQQKKRSNYFDNPLKKATTLKRSASLENLNTPRHTKALDAFYDFMQAEGSPVRAELRDDNLTFFSRVLGGELHFMRFETRYMDRVVDIVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGITLRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSLTMPLPSPGSSGLDHRMSWRGSYAPXXXXXXXXXXXXXXSSSSPPQRDPVVGIPPLPKGKVSRPGVLGTSTSSTAEVDDSAAMMGNSEQYAFPVEDDSRLVLSLDGQPSSGGDEEDPEVSPRLQSSFPSSFTTPSSPAISDDGEEARRPPQSSGSANSNSLKQEWKYKVQRSGEHVIYPYLVVNIGSGVSILKVEGPGKYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDANVVDMTVGDIYGRGYDKFHLSPSVIASSFGKLATRQDPGEGIKEEDMARALLMMITGNIGQVAYLNAVIHQATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGSLGAFLNSSYVEDLHAHTQEAARGLAQTVGPGVIPTGSTARAAAEAPVXXXXXXXXXXXXXXEKAEKAARRAMLLRKQESSPLPTDPRIKGGGVRRVEKLRLQESYGGFLDSAMDNGPVASSPSL--DAGLAGGEITNPAARAAVAAHV 747
            MSY LGPDGKHVDIGAIFGLDVGGTLSKLVYFEQTRKSRKVER QQQK+R NY D P +K +TLKRSASLENL+TPRHTKALDAFY F+QAEGSPVRAELRDDNLTFFSRVLGGELHFMRFETRYMDRVV+IVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGI LRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSL++PLPSPG+ GLD+RMSWRGS+AP              S +  P+       PP  K K  R   L  S S+   V    A     E+   P  DD  L LS   + +      D    P  +   P+S ++PSSP     G+E RRPP S+G+AN+ +LKQEWKYKVQRSGEHVIYPYLVVNIGSGVSILKVEGPG+YERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDA +VDMTVGDIYGRGYDKFHLS SVIASSFGKLAT  DPGE I+EEDMARALLMMITGNIGQVAYLNAVIH+ATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFG+LGAFLNSSYVEDLHAH QE+  G +Q               A                    KA+ AA R   L+  ES P+ +DPRI+     R+E LRL++SYGGFL+  +D    +  P L  D  ++ G     +  AAVA  V
Sbjct:   53 MSYVLGPDGKHVDIGAIFGLDVGGTLSKLVYFEQTRKSRKVERMQQQKRR-NYTDKPFQK-STLKRSASLENLSTPRHTKALDAFYAFIQAEGSPVRAELRDDNLTFFSRVLGGELHFMRFETRYMDRVVEIVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGIVLRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSLSLPLPSPGAGGLDNRMSWRGSHAPGLSSPHSSSCSGAISPTQLPE------APPHEKAKPRRLPGLNLSASAPLTV----AAGSTEERRPPPYGDDRGLGLSTAAEVAGESLCNDNSEVPTRERDQPAS-SSPSSPPGRGYGQEPRRPPTSTGAANAGNLKQEWKYKVQRSGEHVIYPYLVVNIGSGVSILKVEGPGRYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDATMVDMTVGDIYGRGYDKFHLSSSVIASSFGKLATCHDPGEVIREEDMARALLMMITGNIGQVAYLNAVIHRATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGALGAFLNSSYVEDLHAHAQESV-GASQAKRSHRATPNKDNIVAEPGTSESCGMSNGKGGKGANKADHAAAR---LQHHESMPIHSDPRIR--DAPRLESLRLEKSYGGFLEPVVDE---SGDPLLGTDQRVSDGRTNRSSQSAAVATEV 732          
BLAST of NO10G01940 vs. NCBI_GenBank
Match: CBN80136.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 374.8 bits (961), Expect = 6.300e-100
Identity = 226/564 (40.07%), Postives = 306/564 (54.26%), Query Frame = 0
Query:   58 VDIGAIFGLDVGGTLSKLVYFEQTRKSRKVERTQQQKKRSNYFDNPLKKATTLKRSASLENL-NTPRHTKALDAFYDFMQAEGSPVRAELRDDNLTFFSRVLGGELHFMRFETRYMDRVVDIVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGITLRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSLTMPLPSPGSSGLDHRMSWRGSYAPXXXXXXXXXXXXXXSSSSPPQRDPVVGIPPLPKGKVSRPGVLGTSTSSTAEVDDSAAMMGNSEQYAFPVEDDSRLVLSLDGQPSSGGDEEDPEVSPRLQSSFPSSFTTPSSPAISDDGEEARRPPQSSGSANSNSLKQEWKYKVQRS----GEHVIYPYLVVNIGSGVSILKVEGPGKYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDANVVDMTVGDIYGRGYDKFHLSPSVIASSFGKLATRQ---DPGEGIKEEDMARALLMMITGNIGQVAYLNAVIHQATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGSLGAFLNSSYVEDL 614
            VDIGA+ G+D+GGTLSKLVYFE+   S        Q K S    +P+ K   +KR+ SL NL +T    +AL  FY FM        + ++D +L+ +S  LGG LHF  FETR+MDR V+ + ++ +H +I ++GCTGGGA+KF + F +RL + + +MDE++CL+RG++F L ++   CYTY+P                                                   PV                         EV    A  G                   + +   G   ++P   PR                  D+    R    +  SA     K+E+  KV RS         YP LVV++GSGVSI+KV+GP K++R+SGSS+GGGTYWGLCRLLT   S+DE LD+A  G+++ VDM VGDIYGRGY KF LS + +ASSFGK+   +    PG G+ EED+ ++LL+MIT NIGQVAYLNA +H    IYFVGNFLRHN++S ++LA+AIDYWS+G+MEALFLEHEGY G+LG+FL S   E +
Sbjct:   89 VDIGAVLGVDIGGTLSKLVYFEKKAPS----EADPQCKPSG---DPMGKKVEMKRTVSLGNLHDTMEQQEALKEFYTFMDQASRVGESGVKDAHLSVYSHALGGVLHFFHFETRFMDRAVEAIANSPIHRNIQALGCTGGGAFKFEESFLQRLAVRMLQMDEMECLVRGMQFALANIPEACYTYRP---------------------------------------------------PV-------------------------EVKKEGAPSGG------------------EAEEGGGXXXDEPGPDPR------------------DNLRNKRMREMAEVSA-----KREYTVKVGRSIADEPATTAYPALVVSLGSGVSIIKVDGPAKFKRVSGSSIGGGTYWGLCRLLTEATSYDESLDMARQGNSDKVDMLVGDIYGRGYSKFQLSSNTLASSFGKVGGMEAPGKPGSGVSEEDLVQSLLVMITMNIGQVAYLNAKLHNTRRIYFVGNFLRHNRLSGQQLAFAIDYWSSGEMEALFLEHEGYCGALGSFLMSGTEEPI 528          
BLAST of NO10G01940 vs. NCBI_GenBank
Match: GAX26710.1 (type II pantothenate kinase [Fistulifera solaris])

HSP 1 Score: 349.4 bits (895), Expect = 2.800e-92
Identity = 216/527 (40.99%), Postives = 288/527 (54.65%), Query Frame = 0
Query:  102 NPLKKATTLKRSASLENLNTPRHTKALDAFYDFMQAEGSPVRAELRDDNLTFFSRVLGGELHFMRFETRYMDRVVDIVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGITLRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSLTMPLPSPGSSGLDHRMSWRGSYAPXXXXXXXXXXXXXXSSSSPPQRDPVVGIPPLPKGKVSRPGVLGTSTSSTAEVDDS-AAMMGNSEQYAFPVEDDSRLVLSLDGQPSSGGDEEDPEVSPRLQSSFPSSFTTPSSPAISDDGEEARRPPQSSGSANSNSLKQEWKYKVQRS--GEHVIYPYLVVNIGSGVSILKVEGPGKYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDANVVDMTVGDIYGRGYD---KFHLSPSVIASSFGKLATRQDPGEGIKEEDMARALLMMITGNIGQVAYLNAVIHQATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGSLGAFLNSSYVEDLHAHTQEAAR 623
            N  +   +++RS S+ + +  R  +ALD FY F +   S  R  ++DD L+F+SR L GE HF+ FETR M + +D++++N LH +I  MG TGGGA+KF+  +++ LGI + K DELD L+ G++FVL+ VVGECY+++P                                                                       T TSST+ V+ S A    N    +F  E +    LSL    S  G E +                 P +P ++ D                   +  W  KV+R        YPYL+V+IG+GVSIL+V+GP KYERISGS++GGGTYWGL RLLT  + FD+V+ +   GD   VDM VGDIYG   D   K  L  +++ASSFGKL  ++DP  G+K+ED+ARALLMMIT NIGQVAYLNA + +   IYF+GNFLR NKIS RRL+YAIDYWS G+MEALFLEHEGYFG+LGAFL S  V +     ++A R
Sbjct:  307 NQSQPTNSMRRSRSMLDFSRDR-AEALDQFYSFARRLDS-YREGVKDDKLSFYSRELQGEFHFVHFETRRMQQAMDLIRTNNLHLNIKKMGATGGGAHKFAAEWEKELGIIMHKEDELDSLVAGMQFVLRTVVGECYSFRP----------------------------------------------------------------------ATDTSSTSSVNLSRATSFRNEPSSSFESESE----LSLTKGTSVNGQEVE-------------GVFIPETPPLAVD-------------------EWWWSRKVRRDTVSSSETYPYLLVSIGTGVSILRVDGPRKYERISGSTIGGGTYWGLIRLLTDIEDFDDVMRMVANGDPTKVDMMVGDIYGDKSDALEKLGLPANLVASSFGKLVAKEDPASGLKQEDLARALLMMITNNIGQVAYLNAKLSKTKRIYFIGNFLRQNKISQRRLSYAIDYWSKGEMEALFLEHEGYFGALGAFLLSQNVNEPSDAEEKAGR 725          
BLAST of NO10G01940 vs. NCBI_GenBank
Match: GAX10074.1 (type II pantothenate kinase [Fistulifera solaris])

HSP 1 Score: 345.1 bits (884), Expect = 5.300e-91
Identity = 217/517 (41.97%), Postives = 286/517 (55.32%), Query Frame = 0
Query:  110 LKRSASLENLNTPRHTKALDAFYDFMQAEGSPVRAELRDDNLTFFSRVLGGELHFMRFETRYMDRVVDIVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGITLRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSLTMPLPSPGSSGLDHRMSWRGSYAPXXXXXXXXXXXXXXSSSSPPQRDPVVGIPPLPKGKVSRPGVLGTSTSSTAEVDDSAAMMGNSEQYAFPVEDDSRLVLSLDGQPSSGGDEEDPEVSPRLQSSFPSSFTTPSSPAISDDGEEARRP--PQSSGSANSNSLKQEWKYKVQRS--GEHVIYPYLVVNIGSGVSILKVEGPGKYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDANVVDMTVGDIYGRGYD---KFHLSPSVIASSFGKLATRQDPGEGIKEEDMARALLMMITGNIGQVAYLNAVIHQATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGSLGAFLNSSYVEDLHAHTQE 620
            ++RS S+ + +  R  +ALD FY F +   S  R  ++DD L+F+SR L GE HF+ FETR M + +D++++N LH +I  MG TGGGA+KF+  +++ LGI + K DELD L+ G++FVL+ VVGECY+++P                                                                       TSTSST+ V+ S      SE                   PS               SSF       S+   SD+G+E      P++   A     +  W  KV+R        YPYL+V+IG+GVSIL+V+GP KYERISGS++GGGTYWGL RLLT  + FD+V+ +   GD   VDM VGDIYG   D   K  L  +++ASSFGKL  ++DP  G+K+ED+ARALLMMIT NIGQVAYLNA + +   IYF+GNFLR NKIS RRL++AIDYWS G+MEALFLEHEGYFG+LGAFL S  V +  A T+E
Sbjct:  310 MRRSRSMLDFSRDR-AEALDQFYSFARRLDS-YREGVKDDKLSFYSRELQGEFHFVHFETRRMQQAMDLIRTNNLHLNIKKMGATGGGAHKFAAEWEKELGIIMHKEDELDSLVAGMQFVLRTVVGECYSFRP----------------------------------------------------------------------ATSTSSTSSVNLSRGTSFRSE-------------------PS---------------SSFEFESELNSTKGTSDNGQEVEGVFIPETPPLAVD---EWWWSRKVRRDAVSSSETYPYLLVSIGTGVSILRVDGPRKYERISGSTIGGGTYWGLIRLLTDIEDFDDVMRMVANGDPTKVDMMVGDIYGDKSDALEKLGLPANLVASSFGKLVAKEDPASGLKQEDLARALLMMITNNIGQVAYLNAKLSKTKRIYFIGNFLRQNKISQRRLSFAIDYWSKGEMEALFLEHEGYFGALGAFLLSQNVNE-PAKTEE 716          
BLAST of NO10G01940 vs. NCBI_GenBank
Match: XP_002182988.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC45724.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 307.4 bits (786), Expect = 1.200e-79
Identity = 182/452 (40.27%), Postives = 228/452 (50.44%), Query Frame = 0
Query:  156 RVLGGELHFMRFETRYMDRVVDIVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGITLRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSLTMPLPSPGSSGLDHRMSWRGSYAPXXXXXXXXXXXXXXSSSSPPQRDPVVGIPPLPKGKVSRPGVLGTSTSSTAEVDDSAAMMGNSEQYAFPVEDDSRLVLSLDGQPSSGGDEEDPEVSPRLQSSFPSSFTTPSSPAISDDGEEARRPPQSSGSANSNSLKQEWKYKVQRSGEHVIYPYLVVNIGSGVSILKVEGPGKYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDANVVDMTVGDIYGRGYD---KFHLSPSVIASSFGKLATRQDPGEGIKEEDMARALLMMITGNIGQVAYLNAVIHQATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGSLGAF 605
            R LGGE HF++FETR M   +D++++N LH+ I  MG TGGGA+KF+  +QE LGIT+ K +EL+ L+ G++FVL  V+GECYTY+P++     L   G         WR S                                     KV R  +  +ST                                                                                                          YPY++V IG+GVSIL+V+GP K+ER+SGS++GGGTYWGL RLLT    F+ V+ LAE GDA  VDM VGDIYG   D   K  L  +++ASSFGKL  + DP  G+KEED+ARALL+M+T NIGQVAYLNA +H    IYFVGNFLR N IS RRLAYAID+WS G+MEALFLEHEGYFG+LGAF
Sbjct:   29 RELGGEFHFIQFETRRMQNAMDLIRANDLHNHIVEMGATGGGAHKFASAWQEELGITMHKEEELESLVAGMQFVLSTVIGECYTYRPEE-----LKGDG---------WRWS------------------------------------RKVQRDAITYSST----------------------------------------------------------------------------------------------------------YPYMLVTIGTGVSILRVDGPRKHERVSGSTIGGGTYWGLIRLLTDIDDFEHVMRLAEQGDATKVDMMVGDIYGNKSDALEKLGLPSNLVASSFGKLVAKDDPANGLKEEDLARALLLMVTNNIGQVAYLNAKLHNTPRIYFVGNFLRQNNISQRRLAYAIDFWSKGEMEALFLEHEGYFGALGAF 324          
BLAST of NO10G01940 vs. NCBI_GenBank
Match: OEU22922.1 (fumble [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 302.8 bits (774), Expect = 3.000e-78
Identity = 179/489 (36.61%), Postives = 242/489 (49.49%), Query Frame = 0
Query:  126 KALDAFYDFMQAEGSPVRAELRDDNLTFFSRVLGGELHFMRFETRYMDRVVDIVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGITLRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSLTMPLPSPGSSGLDHRMSWRGSYAPXXXXXXXXXXXXXXSSSSPPQRDPVVGIPPLPKGKVSRPGVLGTSTSSTAEVDDSAAMMGNSEQYAFPVEDDSRLVLSLDGQPSSGGDEEDPEVSPRLQSSFPSSFTTPSSPAISDDGEEARRPPQSSGSANSNSLKQEWKYKVQRSGEHVIYPYLVVNIGSGVSILKVEGPGKYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDANVVDMTVGDIYG---RGYDKFHLSPSVIASSFGKLATRQDPGEGIKEEDMARALLMMITGNIGQVAYLNAVIHQATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGSLGAFLNSSYVE 612
            +ALD FYDF +   +  +  + D  L+F+ R LGGE HF+ FETR M   +D+++ N LH +I +MG TGGGA+KF+D++++ LGI + K DELD L+ G++F L  VVGECYT++P +  T                                                                    T  T E  +S                                                                                                  PY++V IG+GVS+L+V+GP ++ER+SGS++GGGT+WGL RLLT  +SF + + LAE GD + VDM VGDIYG      +K  L+ +++ASSFGKL ++ DP +G+ +ED+ARALL ++T NIGQVAYLNA +H    IYFVG+FLR N IS RRL+YAIDYWS G+MEALFLEHEGYFG+LGAFL S  +E
Sbjct:   14 EALDRFYDFARRLDTH-QDSISDIKLSFYCRELGGEFHFISFETRKMKNAMDLIRVNNLHMNIKNMGATGGGAHKFADVWEKELGIGMFKQDELDSLVAGMQFALSTVVGECYTFRPKQDST--------------------------------------------------------------------TEQTTEKAES----------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXPYMLVTIGTGVSVLRVDGPRQHERVSGSTIGGGTFWGLMRLLTDVESFHDSMKLAEKGDLSKVDMMVGDIYGDNSEALEKLGLAANIVASSFGKLVSKDDPSKGLTQEDLARALLSLVTNNIGQVAYLNAKLHNTPRIYFVGSFLRENMISQRRLSYAIDYWSKGEMEALFLEHEGYFGALGAFLMSQNIE 363          
BLAST of NO10G01940 vs. NCBI_GenBank
Match: ETP52452.1 (pantothenate kinase [Phytophthora parasitica P10297])

HSP 1 Score: 301.2 bits (770), Expect = 8.800e-78
Identity = 189/553 (34.18%), Postives = 263/553 (47.56%), Query Frame = 0
Query:   54 DGKHVDIGAIFGLDVGGTLSKLVYFEQTRKSRKVERTQQQKKRSNYFDNPLKKATTLKRSASLENLNTPRHTKALDAFYDFMQAEGSPVRAELRDDNLTFFSRVLGGELHFMRFETRYMDRVVDIVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGITLRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSLTMPLPSPGSSGLDHRMSWRGSYAPXXXXXXXXXXXXXXSSSSPPQRDPVVGIPPLPKGKVSRPGVLGTSTSSTAEVDDSAAMMGNSEQYAFPVEDDSRLVLSLDGQPSSGGDEEDPEVSPRLQSSFPSSFTTPSSPAISDDGEEARRPPQSSGSANSNSLKQEWKYKVQRSGEHVIYPYLVVNIGSGVSILKVEGPGKYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDANVVDMTVGDIYG-RGYDKFHLSPSVIASSFGKLATRQDPGEGIKEEDMARALLMMITGNIGQVAYLNAVIHQATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGSLGAFL 606
            + K  D G +FGLD+GGTL+K+VYF+    +  V+R Q +++              L RS  L  +   R   +L    DF+ +  +   A+ R++ L  F   LGG +HF+ F T  MD + D V+    H  I  + CTGGGA+KFS LF+ RLGI L+K DE+D L++GL FVL+H   ECYT+                                                       V + P   G       LG++T                                                                                              K  + +  ++ +YP+L+VNIGSGVSILK+ G  +YER+SG+SLGGGT+ GLCR L+  ++FDE +D +  GD+N VDMTVGDIYG  GY++FHL P  +ASSFGK   R+ P    ++ D+AR+LL MIT N+GQ+A+LNA   +   IYF GNFLR N+++CR+LAYAI +WS G+M+A F  HEG+FG+LG FL
Sbjct:   46 NAKSADCGRLFGLDIGGTLTKMVYFQSADGAAAVQRQQMERQ--------------LNRSDPLTPIERRRVEGSLPLIDDFIMSLHATDEAQ-REERLQMFVPELGGTIHFINFPTSKMDEITDFVRRRFFHRYIKKIACTGGGAFKFSQLFESRLGIELQKADEMDALIQGLNFVLRHAPNECYTF-------------------------------------------------------VNVIPDTHG-------LGSAT----------------------------------------------------------------------------------------------KKMLPKPNKNDLYPFLLVNIGSGVSILKITGESQYERVSGTSLGGGTFLGLCRALSKLRTFDEAMDASVEGDSNEVDMTVGDIYGTAGYEQFHLKPDTVASSFGKAGARRLP-HPPRDADLARSLLFMITQNLGQLAFLNARRVETKRIYFSGNFLRRNELACRQLAYAISFWSKGEMQAQFFHHEGFFGALGTFL 426          
BLAST of NO10G01940 vs. NCBI_GenBank
Match: XP_008899806.1 (pantothenate kinase [Phytophthora parasitica INRA-310] >ETI54678.1 pantothenate kinase [Phytophthora parasitica P1569] >ETM01012.1 pantothenate kinase [Phytophthora parasitica] >ETM54190.1 pantothenate kinase [Phytophthora parasitica] >ETN15209.1 pantothenate kinase [Phytophthora parasitica INRA-310] >ETP24506.1 pantothenate kinase [Phytophthora parasitica CJ01A1] >KUF84015.1 Pantothenate kinase 2 [Phytophthora nicotianae])

HSP 1 Score: 300.8 bits (769), Expect = 1.200e-77
Identity = 189/553 (34.18%), Postives = 262/553 (47.38%), Query Frame = 0
Query:   54 DGKHVDIGAIFGLDVGGTLSKLVYFEQTRKSRKVERTQQQKKRSNYFDNPLKKATTLKRSASLENLNTPRHTKALDAFYDFMQAEGSPVRAELRDDNLTFFSRVLGGELHFMRFETRYMDRVVDIVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGITLRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSLTMPLPSPGSSGLDHRMSWRGSYAPXXXXXXXXXXXXXXSSSSPPQRDPVVGIPPLPKGKVSRPGVLGTSTSSTAEVDDSAAMMGNSEQYAFPVEDDSRLVLSLDGQPSSGGDEEDPEVSPRLQSSFPSSFTTPSSPAISDDGEEARRPPQSSGSANSNSLKQEWKYKVQRSGEHVIYPYLVVNIGSGVSILKVEGPGKYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDANVVDMTVGDIYG-RGYDKFHLSPSVIASSFGKLATRQDPGEGIKEEDMARALLMMITGNIGQVAYLNAVIHQATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGSLGAFL 606
            + K  D G +FGLD+GGTL+K+VYF+    +  V+R Q +++              L RS  L  +   R   +L    DF+ +  +   A+ R++ L  F   LGG +HF+ F T  MD + D V+    H  I  + CTGGGA+KFS LF+ RLGI L K DE+D L++GL FVL+H   ECYT+                                                       V + P   G       LG++T                                                                                              K  + +  ++ +YP+L+VNIGSGVSILK+ G  +YER+SG+SLGGGT+ GLCR L+  ++FDE +D +  GD+N VDMTVGDIYG  GY++FHL P  +ASSFGK   R+ P    ++ D+AR+LL MIT N+GQ+A+LNA   +   IYF GNFLR N+++CR+LAYAI +WS G+M+A F  HEG+FG+LG FL
Sbjct:   46 NAKSADCGRLFGLDIGGTLTKMVYFQSADGAAAVQRQQMERQ--------------LNRSDPLTPIERRRVEGSLPLIDDFIMSLHATDEAQ-REERLQMFVPELGGTIHFINFPTSKMDEITDFVRRRFFHRYIKKIACTGGGAFKFSQLFESRLGIELHKADEMDALIQGLNFVLRHAPNECYTF-------------------------------------------------------VNVIPDTHG-------LGSAT----------------------------------------------------------------------------------------------KKMLPKPNKNDLYPFLLVNIGSGVSILKITGESQYERVSGTSLGGGTFLGLCRALSKLRTFDEAMDASVEGDSNEVDMTVGDIYGTAGYEQFHLKPDTVASSFGKAGARRLP-HPPRDADLARSLLFMITQNLGQLAFLNARRVETKRIYFSGNFLRRNELACRQLAYAISFWSKGEMQAQFFHHEGFFGALGTFL 426          
BLAST of NO10G01940 vs. NCBI_GenBank
Match: OQS00485.1 (pantothenate kinase [Thraustotheca clavata])

HSP 1 Score: 300.4 bits (768), Expect = 1.500e-77
Identity = 199/590 (33.73%), Postives = 272/590 (46.10%), Query Frame = 0
Query:   17 LSKATLFILISIGTIVAVAARTRS-KKRRRSMSYALGPDGKHVDIGAIFGLDVGGTLSKLVYFEQTRKSRKVERTQQQKKRSNYFDNPLKKATTLKRSASLENLNTPRHTKALDAFYDFMQAEGSPVRAELRDDNLTFFSRVLGGELHFMRFETRYMDRVVDIVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGITLRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSLTMPLPSPGSSGLDHRMSWRGSYAPXXXXXXXXXXXXXXSSSSPPQRDPVVGIPPLPKGKVSRPGVLGTSTSSTAEVDDSAAMMGNSEQYAFPVEDDSRLVLSLDGQPSSGGDEEDPEVSPRLQSSFPSSFTTPSSPAISDDGEEARRPPQSSGSANSNSLKQEWKYKVQRSGEHVIYPYLVVNIGSGVSILKVEGPGKYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDANVVDMTVGDIYGRGYDKFHLSPSVIASSFGKLATRQDPGEGIKEEDMARALLMMITGNIGQVAYLNAVIHQATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGSLGAFL 606
            +S AT F+L +I  +  V  R R  +K +  + Y      +  D+G  FG+DVGGTL KLVY E                                           +    L   ++++       ++  RD N+    +V GG +HF+RFET  +++VV+ V     H  I +M CTGGGA+KFS LF++ LGI L+K DEL CL++GL FV++HV  ECYT+K             +  ++H+                                                  +G +T +                                                           TP+S                                        +YP+L+VNIGSGVSILKV    +Y R+SG+SLGGGTY GLC+LL+  KSFDE +D + +GD+N VDMTVGDIYG GY +F LS   +ASSFGK+ T+ +P  G+++ED+AR+LL+MIT NIGQVAYL+A+      IYF GNFLR N+I+ R+LAYAIDYWS  KMEA F  HEG+FG+LGA L
Sbjct:    1 MSVATRFVLAAITVVGLVVLRKRKLQKLQARIIY-----HRDKDLGHHFGMDVGGTLGKLVYLE-------------------------------------------KDAVELGEVHEYLIENDKYGKSAQRDANMML--QVPGGHIHFLRFETTKLEQVVEFVLHRCFHRDIRTMPCTGGGAFKFSKLFEDHLGINLQKCDELSCLIQGLSFVMRHVPDECYTFK-------------NVSMNHQ-------------------------------------------------GMGQATKTIIH--------------------------------------------------------TPASE---------------------------------------LYPFLLVNIGSGVSILKVSSETEYTRVSGTSLGGGTYLGLCKLLSKYKSFDEAMDASIVGDSNTVDMTVGDIYGGGYSQFKLSADTLASSFGKMGTKYEPKVGVRDEDVARSLLIMITTNIGQVAYLSALRSNTQRIYFCGNFLRQNEIASRQLAYAIDYWSKSKMEAQFFHHEGFFGALGALL 383          
BLAST of NO10G01940 vs. NCBI_GenBank
Match: ETO83437.1 (pantothenate kinase [Phytophthora parasitica P1976])

HSP 1 Score: 300.1 bits (767), Expect = 2.000e-77
Identity = 189/553 (34.18%), Postives = 261/553 (47.20%), Query Frame = 0
Query:   54 DGKHVDIGAIFGLDVGGTLSKLVYFEQTRKSRKVERTQQQKKRSNYFDNPLKKATTLKRSASLENLNTPRHTKALDAFYDFMQAEGSPVRAELRDDNLTFFSRVLGGELHFMRFETRYMDRVVDIVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGITLRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSLTMPLPSPGSSGLDHRMSWRGSYAPXXXXXXXXXXXXXXSSSSPPQRDPVVGIPPLPKGKVSRPGVLGTSTSSTAEVDDSAAMMGNSEQYAFPVEDDSRLVLSLDGQPSSGGDEEDPEVSPRLQSSFPSSFTTPSSPAISDDGEEARRPPQSSGSANSNSLKQEWKYKVQRSGEHVIYPYLVVNIGSGVSILKVEGPGKYERISGSSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDANVVDMTVGDIYG-RGYDKFHLSPSVIASSFGKLATRQDPGEGIKEEDMARALLMMITGNIGQVAYLNAVIHQATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGSLGAFL 606
            + K  D G +FGLD+GGTL+K+VYF+    +  V+R Q +++              L RS  L  +   R   +L    DF+ +  +   A+ R++ L  F   LGG +HF+ F T  MD + D V+    H  I  + CTGGGA+KFS LF+ RLGI L K DE+D L++GL FVL+H   ECYT+                                                       V + P   G       LG++T                                                                                              K  + +  ++ +YP+L+VNIGSGVSILK+ G  +YER+SG+SLGGGT+ GLCR L+  + FDE +D +  GD+N VDMTVGDIYG  GY++FHL P  +ASSFGK   R+ P    ++ D+AR+LL MIT N+GQ+A+LNA   +   IYF GNFLR N+++CR+LAYAI +WS G+M+A F  HEG+FG+LG FL
Sbjct:   46 NAKSADCGRLFGLDIGGTLTKMVYFQSADGAAAVQRQQMERQ--------------LNRSDPLTPIERRRVEGSLPLIDDFIMSLHATDEAQ-REERLQMFVPELGGTIHFINFPTSKMDEITDFVRRRFFHRYIKKIACTGGGAFKFSQLFESRLGIELHKADEMDALIQGLNFVLRHAPNECYTF-------------------------------------------------------VNVIPDTHG-------LGSAT----------------------------------------------------------------------------------------------KKMLPKPNKNDLYPFLLVNIGSGVSILKITGESQYERVSGTSLGGGTFLGLCRALSKLRMFDEAMDASVEGDSNEVDMTVGDIYGTAGYEQFHLKPDTVASSFGKAGARRLP-HPPRDADLARSLLFMITQNLGQLAFLNARRVETKRIYFSGNFLRRNELACRQLAYAISFWSKGEMQAQFFHHEGFFGALGTFL 426          
The following BLAST results are available for this feature:
BLAST of NO10G01940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25386.14.000e-24868.38Type II pantothenate kinase [Nannochloropsis gadit... [more]
CBN80136.16.300e-10040.07conserved unknown protein [Ectocarpus siliculosus][more]
GAX26710.12.800e-9240.99type II pantothenate kinase [Fistulifera solaris][more]
GAX10074.15.300e-9141.97type II pantothenate kinase [Fistulifera solaris][more]
XP_002182988.11.200e-7940.27predicted protein, partial [Phaeodactylum tricornu... [more]
OEU22922.13.000e-7836.61fumble [Fragilariopsis cylindrus CCMP1102][more]
ETP52452.18.800e-7834.18pantothenate kinase [Phytophthora parasitica P1029... [more]
XP_008899806.11.200e-7734.18pantothenate kinase [Phytophthora parasitica INRA-... [more]
OQS00485.11.500e-7733.73pantothenate kinase [Thraustotheca clavata][more]
ETO83437.12.000e-7734.18pantothenate kinase [Phytophthora parasitica P1976... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL054nonsL054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR012ngnoR012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001065NSK001065Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G01940.1NO10G01940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|526988gene_4019Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100005g58gene5089Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G01940.1NO10G01940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G01940 ID=NO10G01940|Name=NO10G01940|organism=Nannochloropsis oceanica|type=gene|length=2857bp
CAGTCTACTAGGCACCATGGCACCTTCCACAGGGGGCGGTCGGGCCAGCC
GGGTGGGATCGGGCCTCTCCAAAGCTACTCTCTTCATCCTGATTTCCATA
GGGACCATCGTGGCGGTGGCGGCCCGCACACGGTCAAAGAAGCGACGGCG
GAGCATGTCCTACGCGCTGGGTCCTGATGGAAAGCACGTAGATATTGGAG
gtgagtgataacggagaggttggaccgaataattagagaggggagggaaa
gggaccgatggaatgcctcgctcaccccttcttgatatttccccccttat
cataatagCCATTTTTGGTCTGGACGTAGGCGGCACGCTGAGTAAGCTCG
TGTACTTTGAGCAGACACGCAAGTCCCGCAAGGTGGAACGAACCCAGCAG
CAAAAAAAGCGGTCCAACTACTTCGACAACCCCCTCAAGAAAGCCACCAC
CTTGAAACGGAGCGCCTCCCTCGAGAATCTCAACACCCCGCGACACACCA
AGGCATTAGATGCTTTTTACGACTTCATGCAAGCAGAAGGCAGCCCCGTG
CGAGCCGAGCTGCGTGATGATAATTTGACGTTCTTCTCACGGGTGCTGGG
CGGCGAGTTGCATTTTATGCGGTTTGAGACCCGGTACATGGACCGAGTGG
TGGACATCGTCAAGTCCAACCGgtgagttgtgcggaaggtagtaacaaca
ggctagctaaaagaatgctgtgagtcatacaagtgtttcatttccgtggt
caccgctgacttaccctcacattttccctttttttctcgttccaatcctt
cacttgtaccttgcagCCTCCATCATAGCATTAACAGCATGGGTTGCACC
GGTGGGGGCGCCTACAAATTTTCCGACCTTTTTCAAGAACGTCTCGGCAT
TACCCTGCGCAAAATGGACGAGCTCGACTGCCTAATGCGAGGGCTGGAAT
TTGTCTTACAGCATGTTGTCGGCGAATGCTACACCTACAAGCCCGACAAG
TCCCTAACCATGCCCCTCCCTTCGCCTGGGAGCAGCGGGCTCGACCACCG
CATGAGCTGGCGAGGGTCATATGCCCCGGCCCCTGCTCCTGCACCTCTTT
TGATGACATCCTCTACTGTCTCCTCCTCCTCGCCGCCACAGCGAGACCCA
GTCGTGGGCATTCCCCCCCTGCCCAAGGGGAAGGTCAGCCGACCCGGCGT
TCTGGGCACCTCGACTTCCTCCACGGCAGAGGTGGACGACAGTGCAGCGA
TGATGGGCAATTCAGAGCAGTACGCATTTCCGGTTGAAGATGATAGCAGG
CTGGTCTTGTCTTTGGACGGCCAGCCTTCTTCGGGGGGAGATGAGGAGGA
TCCTGAGGTGTCCCCGCGCTTGCAGAGCTCTTTCCCTTCATCCTTCACGA
CTCCGTCTTCGCCGGCAATTTCTGACGATGGGGAGGAAGCAAGAAGGCCA
CCGCAGgtaagaaataagaaagagagcgttaaggtatcataattgtgaca
taattgttcatgtagcaatgggtcgtgtgcttacttctcgtctcctgtct
ttcattctgtccattttcgcccagAGCTCGGGCAGCGCCAACTCGAATTC
ATTGAAACAAGAATGGAAATACAAAGTCCAGCGATCAGgtaagacagcac
atgcagagaaggcttgaggcatccctccccatcacgcactctggttccag
cgttcttgtcacatgtgctaagccctcttctccttcctcctcctcccttc
cactacccttaccctttacggaaatcagGCGAACACGTTATTTACCCGTA
CCTTGTCGTGAACATCGGCTCGGGTGTCAGCATCCTGAAGGTCGAAGGCC
CGGGAAAATATGAACGTATCTCCGGCAGCAGCTTGGGAGGTGGTACTTAC
TGGGGACTCTGTCGCCTCCTGACGGGTTGTAAAAGCTTTGATGAGGTTCT
GGATCTAGCGGAGATGGGCGATGCAAATGTGGTGGATATGACGGTAGGAG
ATATATATGGAAGGGGGTACGATAAATTTCATTTGTCGCCCTCGGTGATA
GCCTCGTCGTTTGGGAAGCTTGCCACGAGGCAAGACCCAGGGGAGGGGAT
CAAGGAGGAAGATATGGCGAGGGCATTATTGATGATGATAACGGGTAACA
TCGGCCAGGTTGCGTATTTGAATGCTGTGATTCATCAGGCGACGCATATT
TATTTTGTGGGGAACTTCTTGCGGCACAATAAGATTTCGTGTCGTCGGCT
CGCGTATGCGATTGACTATTGGAGCGCGGGGAAGATGGAAGCGCTCTTTC
TTGAGCACGAAGGATATTTCGGTTCCCTTGGCGCCTTTCTCAACTCTAGC
TACGTCGAAGACTTGCACGCACACACCCAAGAAGCGGCAAGGGGACTCGC
GCAAACCGTCGGACCAGGGGTGATTCCTACGGGAAGTACCGCCCGGGCTG
CGGCTGAGGCTCCTGTTACTGCCACTGCTGAAGCTGTGGCTGGAGGGGGA
AAGGGAGATGAGAAGGCGGAAAAGGCAGCGCGGAGGGCGATGCTGTTGCG
GAAGCAAGAGTCCTCGCCATTGCCGACGGATCCGAGGATTAAAGGGGGGG
GCGTGCGGAGGGTGGAAAAATTACGGTTGCAGGAAAGTTATGGGGGATTC
TTGGACTCCGCCATGGACAATGGGCCGGTGGCCTCTTCTCCTAGCTTGGA
TGCTGGGCTTGCTGGCGGCGAGATAACTAATCCGGCTGCACGGGCTGCTG
TGGCTGCGCATGTGTAGGAGAGCTCAATTGGAGCTTGCTTTGCTCAAGAA
GAGAATTAAAAGTTGATGACTTAGAAATCGTTTCAAATTTAACACTTAAC
GTTGGTA
back to top

protein sequence of NO10G01940.1

>NO10G01940.1-protein ID=NO10G01940.1-protein|Name=NO10G01940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=747bp
MAPSTGGGRASRVGSGLSKATLFILISIGTIVAVAARTRSKKRRRSMSYA
LGPDGKHVDIGAIFGLDVGGTLSKLVYFEQTRKSRKVERTQQQKKRSNYF
DNPLKKATTLKRSASLENLNTPRHTKALDAFYDFMQAEGSPVRAELRDDN
LTFFSRVLGGELHFMRFETRYMDRVVDIVKSNRLHHSINSMGCTGGGAYK
FSDLFQERLGITLRKMDELDCLMRGLEFVLQHVVGECYTYKPDKSLTMPL
PSPGSSGLDHRMSWRGSYAPAPAPAPLLMTSSTVSSSSPPQRDPVVGIPP
LPKGKVSRPGVLGTSTSSTAEVDDSAAMMGNSEQYAFPVEDDSRLVLSLD
GQPSSGGDEEDPEVSPRLQSSFPSSFTTPSSPAISDDGEEARRPPQSSGS
ANSNSLKQEWKYKVQRSGEHVIYPYLVVNIGSGVSILKVEGPGKYERISG
SSLGGGTYWGLCRLLTGCKSFDEVLDLAEMGDANVVDMTVGDIYGRGYDK
FHLSPSVIASSFGKLATRQDPGEGIKEEDMARALLMMITGNIGQVAYLNA
VIHQATHIYFVGNFLRHNKISCRRLAYAIDYWSAGKMEALFLEHEGYFGS
LGAFLNSSYVEDLHAHTQEAARGLAQTVGPGVIPTGSTARAAAEAPVTAT
AEAVAGGGKGDEKAEKAARRAMLLRKQESSPLPTDPRIKGGGVRRVEKLR
LQESYGGFLDSAMDNGPVASSPSLDAGLAGGEITNPAARAAVAAHV*
back to top
Synonyms
Publications