NO04G00870, NO04G00870 (gene) Nannochloropsis oceanica

Overview
NameNO04G00870
Unique NameNO04G00870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1221
Alignment locationchr4:287929..289149 +

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Properties
Property NameValue
DescriptionPleckstriny domain-containing expressed
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:287929..289149 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009769DUF1336
Homology
[Close]
BLAST of NO04G00870 vs. NCBI_GenBank
Match: KUF96109.1 (hypothetical protein AM588_10005802 [Phytophthora nicotianae])

HSP 1 Score: 124.4 bits (311), Expect = 8.100e-25
Identity = 57/119 (47.90%), Postives = 85/119 (71.43%), Query Frame = 0 
Query:  255 LLAEFLEGSDAERNTRFKLIPSMVEGPRMISFAVGNKPVLLGKKLTQRYWSGPGYLEVGIDIGSSIMASRTLGLVRDYSKNIVVELAVLIQGEEERELPEKVLGSLRCSRLDWGLAESL 374
            L+A+FLEGSD  RN RFKLIP +VEG  ++  AVG+ P L+GKKL Q Y+ G  Y E+ +DIGSS +A+R +GLV  Y+K +V+++  +++G+   ELPE++ G+ R   +D G+A+ L
Sbjct:  235 LMADFLEGSDEFRNERFKLIPCIVEGSFIVRQAVGSTPALIGKKLRQPYFKGKQYFELDVDIGSSAVANRVVGLVSGYTKKLVIDMGFVLEGQNSEELPERLFGTCRLVHIDLGVAKKL 353
[Close]
BLAST of NO04G00870 vs. NCBI_GenBank
Match: XP_002903024.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY56194.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 121.3 bits (303), Expect = 6.800e-24
Identity = 56/119 (47.06%), Postives = 84/119 (70.59%), Query Frame = 0 
Query:  255 LLAEFLEGSDAERNTRFKLIPSMVEGPRMISFAVGNKPVLLGKKLTQRYWSGPGYLEVGIDIGSSIMASRTLGLVRDYSKNIVVELAVLIQGEEERELPEKVLGSLRCSRLDWGLAESL 374
            L+A+FLEGSD  RN RFKLIP +VEG  ++  AVG+ P L+GKKL Q Y+ G  Y E+ +DIGSS +A+R +GLV  Y+K +V+++  +++G+   ELPE++ G+ R   +D  +A+ L
Sbjct:  246 LMADFLEGSDEFRNERFKLIPCIVEGSFIVRQAVGSTPALIGKKLRQPYFRGKQYFELDVDIGSSAVANRVVGLVSGYTKKLVIDMGFVLEGQNPEELPERLFGTCRLVHIDLSVAKKL 364
[Close]
BLAST of NO04G00870 vs. NCBI_GenBank
Match: XP_015932491.1 (protein ENHANCED DISEASE RESISTANCE 2 isoform X1 [Arachis duranensis])

HSP 1 Score: 120.9 bits (302), Expect = 8.900e-24
Identity = 61/111 (54.95%), Postives = 83/111 (74.77%), Query Frame = 0 
Query:  255 LLAEFLEGSDAERNTRFKLIPSMVEGPRMISFAVGNKPVLLGKKLTQRYWSGPGYLEVGIDIGSSIMASRTLGLVRDYSKNIVVELAVLIQGEEERELPEKVLGSLRCSRL 366
            LLA+F+ GSDA R++RFKLIPS+VEG  M+  AVG K  LLGK +T +Y+    +LE+ +DIGSS +A   +GLV  Y  NIVV+LA+LI+ +EE ELPE +LG++R +RL
Sbjct:  623 LLAKFVNGSDAFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFRQDNFLEIDVDIGSSSVARGVIGLVLGYVTNIVVDLAILIEAKEEEELPEYILGTVRLNRL 733
[Close]
BLAST of NO04G00870 vs. NCBI_GenBank
Match: XP_015932498.1 (protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Arachis duranensis])

HSP 1 Score: 120.9 bits (302), Expect = 8.900e-24
Identity = 61/111 (54.95%), Postives = 83/111 (74.77%), Query Frame = 0 
Query:  255 LLAEFLEGSDAERNTRFKLIPSMVEGPRMISFAVGNKPVLLGKKLTQRYWSGPGYLEVGIDIGSSIMASRTLGLVRDYSKNIVVELAVLIQGEEERELPEKVLGSLRCSRL 366
            LLA+F+ GSDA R++RFKLIPS+VEG  M+  AVG K  LLGK +T +Y+    +LE+ +DIGSS +A   +GLV  Y  NIVV+LA+LI+ +EE ELPE +LG++R +RL
Sbjct:  540 LLAKFVNGSDAFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFRQDNFLEIDVDIGSSSVARGVIGLVLGYVTNIVVDLAILIEAKEEEELPEYILGTVRLNRL 650
[Close]
BLAST of NO04G00870 vs. NCBI_GenBank
Match: XP_016199856.1 (protein ENHANCED DISEASE RESISTANCE 2 isoform X1 [Arachis ipaensis])

HSP 1 Score: 120.9 bits (302), Expect = 8.900e-24
Identity = 61/111 (54.95%), Postives = 83/111 (74.77%), Query Frame = 0 
Query:  255 LLAEFLEGSDAERNTRFKLIPSMVEGPRMISFAVGNKPVLLGKKLTQRYWSGPGYLEVGIDIGSSIMASRTLGLVRDYSKNIVVELAVLIQGEEERELPEKVLGSLRCSRL 366
            LLA+F+ GSDA R++RFKLIPS+VEG  M+  AVG K  LLGK +T +Y+    +LE+ +DIGSS +A   +GLV  Y  NIVV+LA+LI+ +EE ELPE +LG++R +RL
Sbjct:  623 LLAKFVNGSDAFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFRQDNFLEIDVDIGSSSVARGVIGLVLGYVTNIVVDLAILIEAKEEEELPEYILGTVRLNRL 733
[Close]
BLAST of NO04G00870 vs. NCBI_GenBank
Match: XP_020961738.1 (protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Arachis ipaensis])

HSP 1 Score: 120.9 bits (302), Expect = 8.900e-24
Identity = 61/111 (54.95%), Postives = 83/111 (74.77%), Query Frame = 0 
Query:  255 LLAEFLEGSDAERNTRFKLIPSMVEGPRMISFAVGNKPVLLGKKLTQRYWSGPGYLEVGIDIGSSIMASRTLGLVRDYSKNIVVELAVLIQGEEERELPEKVLGSLRCSRL 366
            LLA+F+ GSDA R++RFKLIPS+VEG  M+  AVG K  LLGK +T +Y+    +LE+ +DIGSS +A   +GLV  Y  NIVV+LA+LI+ +EE ELPE +LG++R +RL
Sbjct:  540 LLAKFVNGSDAFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFRQDNFLEIDVDIGSSSVARGVIGLVLGYVTNIVVDLAILIEAKEEEELPEYILGTVRLNRL 650
[Close]
BLAST of NO04G00870 vs. NCBI_GenBank
Match: XP_014499009.1 (protein ENHANCED DISEASE RESISTANCE 2-like [Vigna radiata var. radiata])

HSP 1 Score: 120.6 bits (301), Expect = 1.200e-23
Identity = 62/121 (51.24%), Postives = 87/121 (71.90%), Query Frame = 0 
Query:  255 LLAEFLEGSDAERNTRFKLIPSMVEGPRMISFAVGNKPVLLGKKLTQRYWSGPGYLEVGIDIGSSIMASRTLGLVRDYSKNIVVELAVLIQGEEERELPEKVLGSLRCSRLDWGLAESLKE 376
            LLA+FL+G DA R+TRFKLIPS+VEG  M+  AVG K  LLGK +T +Y+    + E+ +DIGSS +A   +GLV  Y  ++VV+LA+LI+ +EE ELPE +LG++R +RL    AE L++
Sbjct:  613 LLAKFLDGDDAFRDTRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFKQDNFFEIDVDIGSSSVARSVIGLVLGYVTSLVVDLAILIEAKEESELPEYLLGTVRLNRLKPESAEPLED 733
[Close]
BLAST of NO04G00870 vs. NCBI_GenBank
Match: OQR88173.1 (hypothetical protein ACHHYP_07287 [Achlya hypogyna])

HSP 1 Score: 119.8 bits (299), Expect = 2.000e-23
Identity = 56/127 (44.09%), Postives = 86/127 (67.72%), Query Frame = 0 
Query:  251 KFLMLLAEFLEGSDAERNTRFKLIPSMVEGPRMISFAVGNKPVLLGKKLTQRYWSGPGYLEVGIDIGSSIMASRTLGLVRDYSKNIVVELAVLIQGEEERELPEKVLGSLRCSRLDWGLAESLKERL 378
            KF  L   F  G  A +N RFKL+P++V+GP ++  AV  KP + G K+TQRY++G  Y+EV +DI SS +A+  +GL R Y++ +VV+L++ +QG  E ELPE++ GS+R + LD+  AE +  R+
Sbjct:  196 KFSSLFERFRSGDAAFQNARFKLVPTIVDGPWLVKTAVPQKPAITGNKITQRYYTGRNYVEVDMDIQSSTIANNIVGLCRGYAERLVVDLSLTLQGNNEEELPERIFGSVRFAHLDFTKAEPIPCRV 322
[Close]
BLAST of NO04G00870 vs. NCBI_GenBank
Match: XP_020992421.1 (protein ENHANCED DISEASE RESISTANCE 2-like [Arachis duranensis])

HSP 1 Score: 119.8 bits (299), Expect = 2.000e-23
Identity = 60/111 (54.05%), Postives = 84/111 (75.68%), Query Frame = 0 
Query:  255 LLAEFLEGSDAERNTRFKLIPSMVEGPRMISFAVGNKPVLLGKKLTQRYWSGPGYLEVGIDIGSSIMASRTLGLVRDYSKNIVVELAVLIQGEEERELPEKVLGSLRCSRL 366
            LLA+F++GSDA R++RFKLIPS+VEG  M+  AVG K  LLGK +T +Y     +LE+ +DIGSS +A R +GLV  Y  ++VV+LA+LI+ +EE ELPE +LG++R +RL
Sbjct:  499 LLAKFVDGSDAFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYHRQDNFLEIDLDIGSSSVARRVIGLVMGYVTSLVVDLAILIEAKEEDELPEYILGAVRLNRL 609
[Close]
BLAST of NO04G00870 vs. NCBI_GenBank
Match: CBJ48721.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 119.4 bits (298), Expect = 2.600e-23
Identity = 55/110 (50.00%), Postives = 79/110 (71.82%), Query Frame = 0 
Query:  264 DAERNTRFKLIPSMVEGPRMISFAVGNKPVLLGKKLTQRYWSGPGYLEVGIDIGSSIMASRTLGLVRDYSKNIVVELAVLIQGEEERELPEKVLGSLRCSRLDWGLAESL 374
            D  RN RFKLIPS+V GP ++  AVGNKP LLG+K++QRY+ GPGY+E  +D+GSS++A + + L R Y+K + VEL + ++G  + ELPE V+G +R   +D  +AE L
Sbjct:  521 DDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDVDVGSSMIAEKIVSLCRGYAKALTVELGICLEGRCDEELPETVMGVIRLVNVDIDMAEPL 630
The following BLAST results are available for this feature:
BLAST of NO04G00870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KUF96109.18.100e-2547.90hypothetical protein AM588_10005802 [Phytophthora ... [more]
XP_002903024.16.800e-2447.06conserved hypothetical protein [Phytophthora infes... [more]
XP_015932491.18.900e-2454.95protein ENHANCED DISEASE RESISTANCE 2 isoform X1 [... [more]
XP_015932498.18.900e-2454.95protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [... [more]
XP_016199856.18.900e-2454.95protein ENHANCED DISEASE RESISTANCE 2 isoform X1 [... [more]
XP_020961738.18.900e-2454.95protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [... [more]
XP_014499009.11.200e-2351.24protein ENHANCED DISEASE RESISTANCE 2-like [Vigna ... [more]
OQR88173.12.000e-2344.09hypothetical protein ACHHYP_07287 [Achlya hypogyna... [more]
XP_020992421.12.000e-2354.05protein ENHANCED DISEASE RESISTANCE 2-like [Arachi... [more]
CBJ48721.12.600e-2350.00conserved unknown protein [Ectocarpus siliculosus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL074nonsL074Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR105ngnoR105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G00870.1NO04G00870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|659667gene_1865Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G00870.1NO04G00870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G00870 ID=NO04G00870|Name=NO04G00870|organism=Nannochloropsis oceanica|type=gene|length=1221bp
ATGGGGAGGAGGAAAGGAGGGAGGGAGGAGGAGGAGGAAGACGAGAAGGT
AACGGCGTTGGTGATTAGGGAGCAATTGTCGAGCTTGAGGGATTTGAAGC
CGGCTTTCCACAAGACGTGGGGCAATGCCACGACGGAGTGGAAGGTGCGA
GGGGAGACGTACATGAGTGACGGGATCAAGGTGGGAGGGAAGGCGGCGCA
GCCTTTGTGTGAGCTGGTGCACATGGAGCTTCTAGATGTCGAAAGTGCAG
GGCTGTCGCCAAGGGCAGATCATGTGACGGGTCTTTTTCAGGGGTTGGAT
GGTGTGTACACTCGATGCCAGCTTCTGGCTTCGCGGCCCCCGCCCTTTCT
TTTAATTTTGAATTTTCAAGTACCCGGTAACCCGCCTTGTAGTATGATGT
GTTATTTTGCTTTGAGTGGGGCGGCGAGGAAAGGGGTAGAGAGGGCACAG
AGGAGGGTAAGGAGAAGGAGGGCAAGGGAGGCGGCTGCTGTAGAGGCTGC
GGCGGAGCAGCAAAGGAGGGAAGGTGATGAGGGGGGAGGGTTGCAGGGGA
GAGCGGAAGCGAAAGGCTTCCGGGCGGATTGGGAGGAGATGCACGCCGCT
GTTACGGTCGCTGCAGAGGGACAGGTAGTGTCAGTGGAGGGGGAAAAGGG
GGAGGAGGAAAAGGGGGAGGAGGACGAAGAAGAGGACGAGGAAGAGGAAG
AGGAAGTAGAGATAGACGAGGAGCGAATGAGGACGAAGCAGCTGGAGAAG
AAGTTTTTGATGCTCCTGGCAGAGTTCCTGGAGGGGAGCGACGCGGAAAG
AAATACCCGGTTCAAGCTCATTCCGTCGATGGTAGAGGGGCCTCGGATGA
TAAGTTTTGCTGTGGGTAACAAGCCAGTGTTGCTGGGGAAGAAGCTTACG
CAGCGGTATTGGTCTGGTCCAGGGTACTTAGAGGTGGGCATCGATATTGG
GAGTTCAATTATGGCATCACGGACCTTGGGATTGGTGAGGGACTATAGCA
AGAATATCGTGGTGGAGTTGGCGGTGTTGATTCAGGGGGAGGAGGAGAGG
GAGCTGCCTGAGAAGGTGTTGGGGTCGTTGCGGTGTTCGAGGTTGGATTG
GGGGCTGGCGGAAAGCTTGAAGGAGAGGCTTGAGGCGGCGCGGGCGATGG
CAGCCCCCACTGCCGTATCCCCCGTGCCGTCGGTCGAGTCGCCCGAAGAG
GGAGGGAGGGAAAGCGTGTGA
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protein sequence of NO04G00870.1

>NO04G00870.1-protein ID=NO04G00870.1-protein|Name=NO04G00870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=407bp
MGRRKGGREEEEEDEKVTALVIREQLSSLRDLKPAFHKTWGNATTEWKVR
GETYMSDGIKVGGKAAQPLCELVHMELLDVESAGLSPRADHVTGLFQGLD
GVYTRCQLLASRPPPFLLILNFQVPGNPPCSMMCYFALSGAARKGVERAQ
RRVRRRRAREAAAVEAAAEQQRREGDEGGGLQGRAEAKGFRADWEEMHAA
VTVAAEGQVVSVEGEKGEEEKGEEDEEEDEEEEEEVEIDEERMRTKQLEK
KFLMLLAEFLEGSDAERNTRFKLIPSMVEGPRMISFAVGNKPVLLGKKLT
QRYWSGPGYLEVGIDIGSSIMASRTLGLVRDYSKNIVVELAVLIQGEEER
ELPEKVLGSLRCSRLDWGLAESLKERLEAARAMAAPTAVSPVPSVESPEE
GGRESV*
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Synonyms
Publications