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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr14 | genome | chr14:623192..625351 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G02050.1 vs.
Match: EWM24588.1 (transketolase [Nannochloropsis gaditana]) HSP 1 Score: 1179.9 bits (3051), Expect = 0.000e+0 Identity = 582/715 (81.40%), Postives = 650/715 (90.91%), Query Frame = 0
Query: 6 PSEETTNGSASKKGKESLVSALSTKAVDTVRVLSADIVQKANSGHPGAPMSLAPLAYLLWTKVMKYNPQDPEWLARDRFVLSNGHACALLYGMLHLTGYPQVTMDDLKNFRQIDSITAGHPENTLIKGIEVSTGPLGQGISNAVGLAIAESHLAAVFNKEGHAKVIDNYTYVICGDGCLQEGVSSEASSLAGHLGLGKLIVYYDDNRITIDGDTGLSFTEDVEKRYEAYGWHVQTVDDVQDLDSLMAATEAAKAVTDKPSMIKVKTEIGFGSKKQGSHSVHGSPLGAEDLKQLKEKFGFNPEETFLVAPEVSELFLAAGARGAAAQAAWQMGLDGYKGAYPKETAELVRQCEHKMPDGWKEALPRYSATDKAMATRKFSEIALNALAPIMPELVGGSADLTPSTLTALACSGDYQKETPAGRYFRFGVREHGMTAVANGIFAYGALRPFVATFLNFIGYAWGSVRLTALSHLGVIFVMTHDSIGLGEDGPTHQPVEILEQCRVMPNLNLIRPADGNEVSGAYISAVDHPFTPTVLALSRQNLPNLEGSSVEKTLLGAYVLSEAGGNEEEGG-PELILTGSGSEVAIAVEAAKKLVAEGVRVRVVSFPSWELFEQQEKDYRLEVFPVGVPVVSVEASSIHGWAKYSHAALGLTWFGASGPYTKVYEKFGLTVENLAEKAKEVMSFYKDGGKPVPSLIDVPVISGHYEHKPVATSQA 720
PS++ NGSA+KKGK+SLV+ LSTKAV+TVRVL AD+VQKANSGHPGAPMSLAPLAYLLWT+VMKYNP+DP+WLARDRFVLSNGHACALLY MLHLTGY QVTMD LK FRQ+DSITAGHPENTLIKG+EVSTGPLGQGISNAVGLA+AE HL AVFNK GHAK++DNYTYVICGDGCLQEGVSSEASSLAGHLGLG+LIV+YDDN+ITIDGDT LSFTEDV KRYEAYGWHVQT++DVQDLD+L+AATEAAKA TD+PSMIK++T IGFGSKK+GSHSVHGSPLGAEDLKQLK +FGF+PE+ F+V EV+ELF AAGA+GAAAQAAW ++ YKGA+P E +ELVR EH++P+GW+E LPRY+ DKAMATRKFSEIALN LAP++PELVGGSADLTPSTLTALACSGD+QK+TP GRY RFGVREHGMTA+ANG+FAYGALRPFVATFLNFIGYAWG+VRL+ LSHLGVIFVMTHDSIGLGEDGPTHQPVE LEQ R MPNL+L+RPADGNEVSGAYISA++HP+TP+VLALSRQNLPNLEG+S EKTLLGAYVL+E GG+ GG PELILTGSGSEVAIAVEAAK L AE VRVRVVSFPSWELF+QQ K+YRL VFP GVPVVSVEAS+ HGWAKYSHAALGLTWFGASGPY KVY K+GLT +NL KA+EV++FY G + VPSLIDVP IS +HKPVATS A
Sbjct: 12 PSKDA-NGSAAKKGKQSLVTPLSTKAVNTVRVLCADMVQKANSGHPGAPMSLAPLAYLLWTQVMKYNPKDPQWLARDRFVLSNGHACALLYAMLHLTGYAQVTMDALKAFRQVDSITAGHPENTLIKGVEVSTGPLGQGISNAVGLAMAEMHLGAVFNKSGHAKIVDNYTYVICGDGCLQEGVSSEASSLAGHLGLGRLIVFYDDNQITIDGDTALSFTEDVAKRYEAYGWHVQTLEDVQDLDALLAATEAAKAETDRPSMIKIRTRIGFGSKKEGSHSVHGSPLGAEDLKQLKSRFGFDPEQAFVVPTEVAELFQAAGAKGAAAQAAWNTAMEAYKGAFPAEASELVRCTEHRLPEGWREKLPRYTPEDKAMATRKFSEIALNVLAPMLPELVGGSADLTPSTLTALACSGDFQKKTPDGRYVRFGVREHGMTALANGMFAYGALRPFVATFLNFIGYAWGAVRLSCLSHLGVIFVMTHDSIGLGEDGPTHQPVETLEQIRAMPNLHLLRPADGNEVSGAYISALEHPYTPSVLALSRQNLPNLEGTSAEKTLLGAYVLAEMGGSNGGGGAPELILTGSGSEVAIAVEAAKTL-AETVRVRVVSFPSWELFDQQNKEYRLSVFPAGVPVVSVEASATHGWAKYSHAALGLTWFGASGPYAKVYAKYGLTADNLVSKAREVLAFYA-GDRQVPSLIDVPFISKQLDHKPVATSHA 723
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G02050.1 ID=NO14G02050.1|Name=NO14G02050.1|organism=Nannochloropsis oceanica|type=mRNA|length=2160bp ATGTCGACCAAGCGCCCCTCCGAAGAGACCACCAATGGGTCCGCGTCCAA GAAAGGGAAGGAATCCCTCGTCAGCGCCCTCTCCACCAAGGCCGTCGACA CTGTCCGCGTCCTCTCCGCCGACATCGTGCAAAAAGCCAACAGCGGGCAC CCTGGTGCACCCATGAGCTTGGCCCCGCTTGCTTATCTGCTGTGGACCAA AGTCATGAAGTACAACCCCCAGGACCCTGAATGGCTGGCGCGCGATCGTT TCGTCTTGTCCAACGGCCACGCTTGTGCCTTGCTTTATGGAATGTTGCAT CTCACGGGCTACCCTCAGGTGACGATGGACGATTTGAAGAACTTCAGGCA GATTGATTCGATCACGGCGGGGCATCCGGAGAACACTCTAATCAAGGGGA TTGAGGTCTCAACGGGGCCATTGGGGCAGGGGATCTCGAACGCAGTGGGT TTAGCGATTGCTGAGAGCCACTTGGCAGCTGTGTTTAACAAGGAGGGCCA CGCTAAGGTGATTGACAACTATACCTATGTGATTTGTGGGGACGGGTGCT TGCAGGAGGGGGTGTCGAGCGAGGCCAGTTCTCTGGCGGGGCATTTGGGA CTGGGGAAATTAATTGTTTACTATGACGACAACCGGATCACGATTGATGG GGATACGGGATTGTCGTTCACGGAGGATGTGGAGAAGAGGTACGAGGCTT ATGGGTGGCATGTGCAGACCGTGGATGACGTCCAGGACCTTGATTCGTTG ATGGCAGCGACGGAGGCAGCCAAGGCCGTGACGGACAAGCCGAGCATGAT CAAAGTGAAGACGGAGATCGGGTTTGGGAGCAAGAAGCAGGGGTCGCATT CTGTCCACGGGTCGCCGTTGGGGGCGGAGGATCTGAAGCAGTTGAAGGAA AAATTTGGATTCAACCCGGAGGAGACGTTCCTGGTAGCCCCTGAGGTGAG TGAGTTGTTTTTGGCGGCGGGCGCGAGGGGGGCGGCGGCGCAGGCGGCTT GGCAGATGGGGTTGGACGGATATAAGGGAGCTTACCCCAAGGAGACTGCG GAGTTGGTGCGACAGTGTGAGCACAAGATGCCGGATGGGTGGAAGGAGGC GTTGCCGCGGTATAGCGCGACGGACAAGGCCATGGCGACGAGGAAGTTCT CGGAGATTGCGCTGAACGCATTGGCGCCCATCATGCCGGAGTTGGTTGGG GGGTCGGCGGATCTGACGCCTTCGACGCTGACAGCTTTGGCATGTTCGGG CGATTATCAGAAGGAGACTCCCGCGGGGAGGTATTTCAGGTTTGGAGTGA GGGAGCATGGGATGACGGCGGTGGCAAACGGGATATTCGCCTACGGGGCG TTGAGACCCTTTGTCGCGACGTTTTTGAATTTCATTGGTTATGCCTGGGG TTCTGTGAGGTTGACTGCATTGTCTCACTTGGGGGTAATTTTTGTGATGA CGCACGATTCAATCGGATTGGGGGAGGACGGACCCACGCACCAGCCGGTG GAGATCCTGGAGCAGTGTCGGGTGATGCCTAATTTGAACTTAATCAGACC TGCAGATGGGAACGAGGTGTCGGGTGCTTACATATCGGCAGTCGACCATC CCTTCACGCCCACGGTGTTGGCCTTGAGTCGACAGAACCTGCCGAATCTG GAGGGGAGCAGCGTGGAGAAAACTCTGTTAGGCGCTTATGTCCTGTCGGA GGCGGGAGGCAATGAAGAGGAGGGGGGGCCAGAACTCATTTTAACGGGTT CGGGTTCGGAGGTAGCGATTGCGGTCGAGGCAGCCAAGAAGCTGGTGGCG GAGGGGGTTAGGGTGCGTGTGGTGAGTTTCCCTAGTTGGGAGCTGTTCGA GCAGCAGGAGAAGGATTACAGGTTGGAAGTTTTCCCGGTGGGAGTGCCGG TTGTGAGTGTTGAGGCATCTTCGATCCATGGCTGGGCGAAGTACTCGCAT GCAGCTCTGGGCTTGACCTGGTTTGGGGCCTCGGGGCCTTATACAAAGGT GTATGAGAAATTTGGGTTGACGGTCGAAAATCTGGCGGAGAAGGCGAAGG AGGTGATGTCTTTCTATAAGGATGGGGGTAAGCCGGTACCGAGTTTGATT GACGTGCCCGTGATTTCGGGTCACTATGAGCACAAACCGGTGGCCACCTC ACAGGCATAA back to topprotein sequence of NO14G02050.1 >NO14G02050.1-protein ID=NO14G02050.1-protein|Name=NO14G02050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=720bp MSTKRPSEETTNGSASKKGKESLVSALSTKAVDTVRVLSADIVQKANSGH PGAPMSLAPLAYLLWTKVMKYNPQDPEWLARDRFVLSNGHACALLYGMLH LTGYPQVTMDDLKNFRQIDSITAGHPENTLIKGIEVSTGPLGQGISNAVG LAIAESHLAAVFNKEGHAKVIDNYTYVICGDGCLQEGVSSEASSLAGHLG LGKLIVYYDDNRITIDGDTGLSFTEDVEKRYEAYGWHVQTVDDVQDLDSL MAATEAAKAVTDKPSMIKVKTEIGFGSKKQGSHSVHGSPLGAEDLKQLKE KFGFNPEETFLVAPEVSELFLAAGARGAAAQAAWQMGLDGYKGAYPKETA ELVRQCEHKMPDGWKEALPRYSATDKAMATRKFSEIALNALAPIMPELVG GSADLTPSTLTALACSGDYQKETPAGRYFRFGVREHGMTAVANGIFAYGA LRPFVATFLNFIGYAWGSVRLTALSHLGVIFVMTHDSIGLGEDGPTHQPV EILEQCRVMPNLNLIRPADGNEVSGAYISAVDHPFTPTVLALSRQNLPNL EGSSVEKTLLGAYVLSEAGGNEEEGGPELILTGSGSEVAIAVEAAKKLVA EGVRVRVVSFPSWELFEQQEKDYRLEVFPVGVPVVSVEASSIHGWAKYSH AALGLTWFGASGPYTKVYEKFGLTVENLAEKAKEVMSFYKDGGKPVPSLI DVPVISGHYEHKPVATSQA* back to topmRNA from alignment at chr14:623192..625351+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G02050.1 ID=NO14G02050.1|Name=NO14G02050.1|organism=Nannochloropsis oceanica|type=mRNA|length=2160bp|location=Sequence derived from alignment at chr14:623192..625351+ (Nannochloropsis oceanica) ATGTCGACCAAGCGCCCCTCCGAAGAGACCACCAATGGGTCCGCGTCCAA
GAAAGGGAAGGAATCCCTCGTCAGCGCCCTCTCCACCAAGGCCGTCGACA
CTGTCCGCGTCCTCTCCGCCGACATCGTGCAAAAAGCCAACAGCGGGCAC
CCTGGTGCACCCATGAGCTTGGCCCCGCTTGCTTATCTGCTGTGGACCAA
AGTCATGAAGTACAACCCCCAGGACCCTGAATGGCTGGCGCGCGATCGTT
TCGTCTTGTCCAACGGCCACGCTTGTGCCTTGCTTTATGGAATGTTGCAT
CTCACGGGCTACCCTCAGGTGACGATGGACGATTTGAAGAACTTCAGGCA
GATTGATTCGATCACGGCGGGGCATCCGGAGAACACTCTAATCAAGGGGA
TTGAGGTCTCAACGGGGCCATTGGGGCAGGGGATCTCGAACGCAGTGGGT
TTAGCGATTGCTGAGAGCCACTTGGCAGCTGTGTTTAACAAGGAGGGCCA
CGCTAAGGTGATTGACAACTATACCTATGTGATTTGTGGGGACGGGTGCT
TGCAGGAGGGGGTGTCGAGCGAGGCCAGTTCTCTGGCGGGGCATTTGGGA
CTGGGGAAATTAATTGTTTACTATGACGACAACCGGATCACGATTGATGG
GGATACGGGATTGTCGTTCACGGAGGATGTGGAGAAGAGGTACGAGGCTT
ATGGGTGGCATGTGCAGACCGTGGATGACGTCCAGGACCTTGATTCGTTG
ATGGCAGCGACGGAGGCAGCCAAGGCCGTGACGGACAAGCCGAGCATGAT
CAAAGTGAAGACGGAGATCGGGTTTGGGAGCAAGAAGCAGGGGTCGCATT
CTGTCCACGGGTCGCCGTTGGGGGCGGAGGATCTGAAGCAGTTGAAGGAA
AAATTTGGATTCAACCCGGAGGAGACGTTCCTGGTAGCCCCTGAGGTGAG
TGAGTTGTTTTTGGCGGCGGGCGCGAGGGGGGCGGCGGCGCAGGCGGCTT
GGCAGATGGGGTTGGACGGATATAAGGGAGCTTACCCCAAGGAGACTGCG
GAGTTGGTGCGACAGTGTGAGCACAAGATGCCGGATGGGTGGAAGGAGGC
GTTGCCGCGGTATAGCGCGACGGACAAGGCCATGGCGACGAGGAAGTTCT
CGGAGATTGCGCTGAACGCATTGGCGCCCATCATGCCGGAGTTGGTTGGG
GGGTCGGCGGATCTGACGCCTTCGACGCTGACAGCTTTGGCATGTTCGGG
CGATTATCAGAAGGAGACTCCCGCGGGGAGGTATTTCAGGTTTGGAGTGA
GGGAGCATGGGATGACGGCGGTGGCAAACGGGATATTCGCCTACGGGGCG
TTGAGACCCTTTGTCGCGACGTTTTTGAATTTCATTGGTTATGCCTGGGG
TTCTGTGAGGTTGACTGCATTGTCTCACTTGGGGGTAATTTTTGTGATGA
CGCACGATTCAATCGGATTGGGGGAGGACGGACCCACGCACCAGCCGGTG
GAGATCCTGGAGCAGTGTCGGGTGATGCCTAATTTGAACTTAATCAGACC
TGCAGATGGGAACGAGGTGTCGGGTGCTTACATATCGGCAGTCGACCATC
CCTTCACGCCCACGGTGTTGGCCTTGAGTCGACAGAACCTGCCGAATCTG
GAGGGGAGCAGCGTGGAGAAAACTCTGTTAGGCGCTTATGTCCTGTCGGA
GGCGGGAGGCAATGAAGAGGAGGGGGGGCCAGAACTCATTTTAACGGGTT
CGGGTTCGGAGGTAGCGATTGCGGTCGAGGCAGCCAAGAAGCTGGTGGCG
GAGGGGGTTAGGGTGCGTGTGGTGAGTTTCCCTAGTTGGGAGCTGTTCGA
GCAGCAGGAGAAGGATTACAGGTTGGAAGTTTTCCCGGTGGGAGTGCCGG
TTGTGAGTGTTGAGGCATCTTCGATCCATGGCTGGGCGAAGTACTCGCAT
GCAGCTCTGGGCTTGACCTGGTTTGGGGCCTCGGGGCCTTATACAAAGGT
GTATGAGAAATTTGGGTTGACGGTCGAAAATCTGGCGGAGAAGGCGAAGG
AGGTGATGTCTTTCTATAAGGATGGGGGTAAGCCGGTACCGAGTTTGATT
GACGTGCCCGTGATTTCGGGTCACTATGAGCACAAACCGGTGGCCACCTC
ACAGGCATAA back to topCoding sequence (CDS) from alignment at chr14:623192..625351+ >NO14G02050.1 ID=NO14G02050.1|Name=NO14G02050.1|organism=Nannochloropsis oceanica|type=CDS|length=2160bp|location=Sequence derived from alignment at chr14:623192..625351+ (Nannochloropsis oceanica) ATGTCGACCAAGCGCCCCTCCGAAGAGACCACCAATGGGTCCGCGTCCAA GAAAGGGAAGGAATCCCTCGTCAGCGCCCTCTCCACCAAGGCCGTCGACA CTGTCCGCGTCCTCTCCGCCGACATCGTGCAAAAAGCCAACAGCGGGCAC CCTGGTGCACCCATGAGCTTGGCCCCGCTTGCTTATCTGCTGTGGACCAA AGTCATGAAGTACAACCCCCAGGACCCTGAATGGCTGGCGCGCGATCGTT TCGTCTTGTCCAACGGCCACGCTTGTGCCTTGCTTTATGGAATGTTGCAT CTCACGGGCTACCCTCAGGTGACGATGGACGATTTGAAGAACTTCAGGCA GATTGATTCGATCACGGCGGGGCATCCGGAGAACACTCTAATCAAGGGGA TTGAGGTCTCAACGGGGCCATTGGGGCAGGGGATCTCGAACGCAGTGGGT TTAGCGATTGCTGAGAGCCACTTGGCAGCTGTGTTTAACAAGGAGGGCCA CGCTAAGGTGATTGACAACTATACCTATGTGATTTGTGGGGACGGGTGCT TGCAGGAGGGGGTGTCGAGCGAGGCCAGTTCTCTGGCGGGGCATTTGGGA CTGGGGAAATTAATTGTTTACTATGACGACAACCGGATCACGATTGATGG GGATACGGGATTGTCGTTCACGGAGGATGTGGAGAAGAGGTACGAGGCTT ATGGGTGGCATGTGCAGACCGTGGATGACGTCCAGGACCTTGATTCGTTG ATGGCAGCGACGGAGGCAGCCAAGGCCGTGACGGACAAGCCGAGCATGAT CAAAGTGAAGACGGAGATCGGGTTTGGGAGCAAGAAGCAGGGGTCGCATT CTGTCCACGGGTCGCCGTTGGGGGCGGAGGATCTGAAGCAGTTGAAGGAA AAATTTGGATTCAACCCGGAGGAGACGTTCCTGGTAGCCCCTGAGGTGAG TGAGTTGTTTTTGGCGGCGGGCGCGAGGGGGGCGGCGGCGCAGGCGGCTT GGCAGATGGGGTTGGACGGATATAAGGGAGCTTACCCCAAGGAGACTGCG GAGTTGGTGCGACAGTGTGAGCACAAGATGCCGGATGGGTGGAAGGAGGC GTTGCCGCGGTATAGCGCGACGGACAAGGCCATGGCGACGAGGAAGTTCT CGGAGATTGCGCTGAACGCATTGGCGCCCATCATGCCGGAGTTGGTTGGG GGGTCGGCGGATCTGACGCCTTCGACGCTGACAGCTTTGGCATGTTCGGG CGATTATCAGAAGGAGACTCCCGCGGGGAGGTATTTCAGGTTTGGAGTGA GGGAGCATGGGATGACGGCGGTGGCAAACGGGATATTCGCCTACGGGGCG TTGAGACCCTTTGTCGCGACGTTTTTGAATTTCATTGGTTATGCCTGGGG TTCTGTGAGGTTGACTGCATTGTCTCACTTGGGGGTAATTTTTGTGATGA CGCACGATTCAATCGGATTGGGGGAGGACGGACCCACGCACCAGCCGGTG GAGATCCTGGAGCAGTGTCGGGTGATGCCTAATTTGAACTTAATCAGACC TGCAGATGGGAACGAGGTGTCGGGTGCTTACATATCGGCAGTCGACCATC CCTTCACGCCCACGGTGTTGGCCTTGAGTCGACAGAACCTGCCGAATCTG GAGGGGAGCAGCGTGGAGAAAACTCTGTTAGGCGCTTATGTCCTGTCGGA GGCGGGAGGCAATGAAGAGGAGGGGGGGCCAGAACTCATTTTAACGGGTT CGGGTTCGGAGGTAGCGATTGCGGTCGAGGCAGCCAAGAAGCTGGTGGCG GAGGGGGTTAGGGTGCGTGTGGTGAGTTTCCCTAGTTGGGAGCTGTTCGA GCAGCAGGAGAAGGATTACAGGTTGGAAGTTTTCCCGGTGGGAGTGCCGG TTGTGAGTGTTGAGGCATCTTCGATCCATGGCTGGGCGAAGTACTCGCAT GCAGCTCTGGGCTTGACCTGGTTTGGGGCCTCGGGGCCTTATACAAAGGT GTATGAGAAATTTGGGTTGACGGTCGAAAATCTGGCGGAGAAGGCGAAGG AGGTGATGTCTTTCTATAAGGATGGGGGTAAGCCGGTACCGAGTTTGATT GACGTGCCCGTGATTTCGGGTCACTATGAGCACAAACCGGTGGCCACCTC ACAGGCATAA back to top
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