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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr14 | genome | chr14:611026..613394 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G02000.1 vs.
Match: EWM24611.1 (hydrolase or acyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 488.0 bits (1255), Expect = 3.200e-134 Identity = 259/379 (68.34%), Postives = 291/379 (76.78%), Query Frame = 0
Query: 1 MAPFLYSPPRNLVRAEEFVVAAGVRRSSRFTLWRTVSGRIG--GEPRSIARTGRMDKEEHAQAEKEEGERAAKEEEIHQEKLRLAELEAEGKGHPPMEVKVGFQQRWRERFFLTSYVLDAVICAAYDQVLLPQTQGSKRPVLLVPGWCGRTRSFRKMAERLAAEGYPVYPVPLGSQLGCIDRKASLLTTFLDRHGLEDVYVVAHSMGGLISVRSMMKGETRIRRLITMGTPFRGTHVIYLGYLVTFALVIALSFWLSPLAGTIYLTLFIQIPSLWQMQPSSGFLSETLEYLSRVATPVQCVYAVRDQIVIHNWRQAWSPTRLGRTDDLCLPEYGHMNLFMGASGIELVARLLAHYEATAAA--TAAAAARTTAPTEASA 376
MAPFL SPP +VRAE+ V AGVRRS RF L+R SGRI G PR + RTG +D + GE E + +G + + +G +QRWRER FL SY+ DA++CAA+D VL P +GSKRPVLLVPGWCGRTRSFRKMAERL EGYPVYPVPLGSQLGCIDRKA L++ FLD HGLEDVYVVAHSMGGLISVRSMMKGETRIR+L+TMGTP+RGTHVIYLGY VT ALV+ALSFWLSPLAGTIYL LF+QIPSL+QMQPSS FL ETLEYL+RVATPVQC+YAVRDQIVIH+WRQAWSPTRLGR DDLCL EYGHMNLFMG SGIELVARLL Y+A A+ ++ TTA E A
Sbjct: 1 MAPFLGSPPPTVVRAEKAAVEAGVRRSERFNLFRIASGRIRNRGTPRHLIRTGALDDGGAPRVGGARGEGVCGPFGRQCP-------EIDARGLTSVTLNIGMRQRWRERMFLASYIADALVCAAHDLVLSPHKEGSKRPVLLVPGWCGRTRSFRKMAERLVREGYPVYPVPLGSQLGCIDRKARLVSKFLDLHGLEDVYVVAHSMGGLISVRSMMKGETRIRKLVTMGTPYRGTHVIYLGYAVTLALVLALSFWLSPLAGTIYLALFLQIPSLYQMQPSSDFLEETLEYLNRVATPVQCIYAVRDQIVIHDWRQAWSPTRLGRPDDLCLLEYGHMNLFMGESGIELVARLLERYDAADASLPSSRCVEGTTASVEKGA 372
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G02000.1 ID=NO14G02000.1|Name=NO14G02000.1|organism=Nannochloropsis oceanica|type=mRNA|length=2369bp CGACAGAAGAGCGTCAGGGGGCTTTGTCAGCCGACCAAAATAAATCTGTT GTTCTGAGGCCTGGAGTTGCGAGGGCGAGCAAGTGGCTACAGTAGCAAAG AGATACATACACCTGCACCAAGCATGGCGCCCTTTTTGTACAGCCCGCCA CGAAATCTGGTCCGGGCCGAGGAATTTGTCGTGGCGGCAGGAGTGCGGAG GAGCAGTCGCTTCACCTTGTGGCGGACAGTGTCCGGGCGGATAGGAGGGG AACCTCGATCGATCGCGCGCACAGGACGAATGGATAAGGAGGAGCATGCA CAGGCAGAGAAGGAAGAAGGCGAGAGGGCGGCCAAGGAAGAGGAGATACA CCAAGAGAAGCTTCGATTGGCAGAGCTGGAGGCTGAAGGAAAGGGGCATC CGCCCATGGAGGTCAAGGTGGGCTTCCAGCAACGGTGGCGAGAACGCTTT TTCCTGACCTCGTATGTGTTGGACGCCGTAATCTGCGCAGCCTACGACCA AGTTCTCCTGCCCCAGACACAAGGCAGTAAGCGACCTGTACTCCTTGTGC CTGGATGGTGCGGTCGAACGCGGAGCTTTCGGAAGATGGCGGAACGGTTG GCGGCGGAGGGGTACCCTGTTTATCCCGTGCCTTTGGGGTCGCAGCTTGG GTGCATTGATCGTAAGGCGAGCTTGCTAACCACGTTTTTAGACAGACACG GCTTGGAGGACGTGTATGTGGTGGCACATTCCATGGGGGGGCTGATAAGC GTGCGGAGTATGATGAAAGGAGAGACACGAATTAGACGGTTGATCACCAT GGGGACGCCTTTCCGCGGCACCCACGTCATCTACCTCGGGTACCTAGTCA CGTTTGCCTTGGTAATCGCCCTATCCTTCTGGCTGAGCCCCTTGGCAGGG ACGATTTATTTGACGTTATTCATCCAGATCCCTTCTCTATGGCAGATGCA GCCCAGCTCGGGTTTCCTCTCGGAGACACTCGAGTACCTCTCTCGTGTCG CGACGCCTGTCCAGTGTGTCTATGCCGTCAGGGACCAGATTGTGATTCAC AATTGGCGGCAGGCCTGGAGTCCTACGCGGTTGGGGAGGACGGATGATTT GTGTTTACCAGAGTATGGGCATATGAATTTGTTCATGGGTGCGTCCGGGA TTGAGCTCGTGGCACGGTTGCTGGCACACTATGAGGCCACTGCTGCTGCT ACTGCTGCTGCTGCTGCTCGGACTACTGCTCCGACTGAAGCCTCTGCTGT TCCTCTTTTCTCGAAGAAAACAAATGAATGTAATCAGGAGGAGATTGGCG AGGAGGAGGAGAAGGAGGAGGAGGAAGAGGAGGAAGAGGAGGAAGAGGAG GAGCAGGAGGAGGAGCAGGAGGGGGGGAGAGTGAATGCTCAGCAGCAGCG GCCGCAGCATTCGCTGGAAAAGCGATTGGAGGCGGCGAATGGTATGTGGG GAGGGAGGGGGATCTTTGGGCATGCTACGGGAGCAGGGGGATCATTCCGT ACCGGGAAAAGAAGAATGATGGAGGATGAGTAAGGCGAAGGAGTGGGAGT AAGGAGGAAGGCTTTGATGAAGATTTTTGTGTAAAATGGTCACAAAGAGT AGGGCAGAAAGGGAGGGAGGGGGAAAAATATCCACACTCACGTCTCCAGA AGATTTCATCGTGTAATTGTTTCTGTGGACAAAGACGAAGGGGATAGAAA GACCAAGCCAGATGAATGGAAGGAGAGAAGGAGGTATATATTTTTTATGG TTGCAAGAGAGGCCAAGCTGAGGGTTTGCTGCTTGCTGGAGCTAGGAATG TGAGATCTGGCTCTGGGCCAAATAATCACAACAATTTTGTGCTTGTACAT GTGGAGGGGTTGAAGTAGGGGGATGGGGTTTGGAATTAGGGGAAGAGGAG AGAGCAGGAGCAGGACGAAGAGCAGTGGGCGCAAATGTGTGTTTGGCCTG CATGCTTTTTAAATTATAAAAATGTATGATAGAACACGATTTTGCCACTT CTAACAAATGTTTATATTCTTGTATGGATGTTCAGATCGATCTACCTATT TTCCCTTCTCCTCAGACCTCGTTGCCACGCCGCTATGTCGTGACTGCTCA AAAAAGGGAAATGACGCCCTCGTATGGCACACTGATTCGTGGGTAGAATG AATGAAAATTGATGGGGAGGAAGACGAAGAGGGGGAAGGCAGTGAGGGGT AGATGGAGAGAAGAATTCACGGCGGATTTTGACTGTGCGTACGCAGCTTC TCCTATCGACACTGATCGCAGCAACAAACAACGTAGATGCCGACCGAGAC TGGCGTGGAGATACTAGAAGGCGGGATAGTGAGAAATGGCAAAGAACAGG ACGAAGCCTGAAAGTTCAG back to topprotein sequence of NO14G02000.1 >NO14G02000.1-protein ID=NO14G02000.1-protein|Name=NO14G02000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=470bp MAPFLYSPPRNLVRAEEFVVAAGVRRSSRFTLWRTVSGRIGGEPRSIART GRMDKEEHAQAEKEEGERAAKEEEIHQEKLRLAELEAEGKGHPPMEVKVG FQQRWRERFFLTSYVLDAVICAAYDQVLLPQTQGSKRPVLLVPGWCGRTR SFRKMAERLAAEGYPVYPVPLGSQLGCIDRKASLLTTFLDRHGLEDVYVV AHSMGGLISVRSMMKGETRIRRLITMGTPFRGTHVIYLGYLVTFALVIAL SFWLSPLAGTIYLTLFIQIPSLWQMQPSSGFLSETLEYLSRVATPVQCVY AVRDQIVIHNWRQAWSPTRLGRTDDLCLPEYGHMNLFMGASGIELVARLL AHYEATAAATAAAAARTTAPTEASAVPLFSKKTNECNQEEIGEEEEKEEE EEEEEEEEEEQEEEQEGGRVNAQQQRPQHSLEKRLEAANGMWGGRGIFGH ATGAGGSFRTGKRRMMEDE* back to topmRNA from alignment at chr14:611026..613394+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G02000.1 ID=NO14G02000.1|Name=NO14G02000.1|organism=Nannochloropsis oceanica|type=mRNA|length=2369bp|location=Sequence derived from alignment at chr14:611026..613394+ (Nannochloropsis oceanica) CGACAGAAGAGCGTCAGGGGGCTTTGTCAGCCGACCAAAATAAATCTGTT
GTTCTGAGGCCTGGAGTTGCGAGGGCGAGCAAGTGGCTACAGTAGCAAAG
AGATACATACACCTGCACCAAGCATGGCGCCCTTTTTGTACAGCCCGCCA
CGAAATCTGGTCCGGGCCGAGGAATTTGTCGTGGCGGCAGGAGTGCGGAG
GAGCAGTCGCTTCACCTTGTGGCGGACAGTGTCCGGGCGGATAGGAGGGG
AACCTCGATCGATCGCGCGCACAGGACGAATGGATAAGGAGGAGCATGCA
CAGGCAGAGAAGGAAGAAGGCGAGAGGGCGGCCAAGGAAGAGGAGATACA
CCAAGAGAAGCTTCGATTGGCAGAGCTGGAGGCTGAAGGAAAGGGGCATC
CGCCCATGGAGGTCAAGGTGGGCTTCCAGCAACGGTGGCGAGAACGCTTT
TTCCTGACCTCGTATGTGTTGGACGCCGTAATCTGCGCAGCCTACGACCA
AGTTCTCCTGCCCCAGACACAAGGCAGTAAGCGACCTGTACTCCTTGTGC
CTGGATGGTGCGGTCGAACGCGGAGCTTTCGGAAGATGGCGGAACGGTTG
GCGGCGGAGGGGTACCCTGTTTATCCCGTGCCTTTGGGGTCGCAGCTTGG
GTGCATTGATCGTAAGGCGAGCTTGCTAACCACGTTTTTAGACAGACACG
GCTTGGAGGACGTGTATGTGGTGGCACATTCCATGGGGGGGCTGATAAGC
GTGCGGAGTATGATGAAAGGAGAGACACGAATTAGACGGTTGATCACCAT
GGGGACGCCTTTCCGCGGCACCCACGTCATCTACCTCGGGTACCTAGTCA
CGTTTGCCTTGGTAATCGCCCTATCCTTCTGGCTGAGCCCCTTGGCAGGG
ACGATTTATTTGACGTTATTCATCCAGATCCCTTCTCTATGGCAGATGCA
GCCCAGCTCGGGTTTCCTCTCGGAGACACTCGAGTACCTCTCTCGTGTCG
CGACGCCTGTCCAGTGTGTCTATGCCGTCAGGGACCAGATTGTGATTCAC
AATTGGCGGCAGGCCTGGAGTCCTACGCGGTTGGGGAGGACGGATGATTT
GTGTTTACCAGAGTATGGGCATATGAATTTGTTCATGGGTGCGTCCGGGA
TTGAGCTCGTGGCACGGTTGCTGGCACACTATGAGGCCACTGCTGCTGCT
ACTGCTGCTGCTGCTGCTCGGACTACTGCTCCGACTGAAGCCTCTGCTGT
TCCTCTTTTCTCGAAGAAAACAAATGAATGTAATCAGGAGGAGATTGGCG
AGGAGGAGGAGAAGGAGGAGGAGGAAGAGGAGGAAGAGGAGGAAGAGGAG
GAGCAGGAGGAGGAGCAGGAGGGGGGGAGAGTGAATGCTCAGCAGCAGCG
GCCGCAGCATTCGCTGGAAAAGCGATTGGAGGCGGCGAATGGTATGTGGG
GAGGGAGGGGGATCTTTGGGCATGCTACGGGAGCAGGGGGATCATTCCGT
ACCGGGAAAAGAAGAATGATGGAGGATGAGTAAGGCGAAGGAGTGGGAGT
AAGGAGGAAGGCTTTGATGAAGATTTTTGTGTAAAATGGTCACAAAGAGT
AGGGCAGAAAGGGAGGGAGGGGGAAAAATATCCACACTCACGTCTCCAGA
AGATTTCATCGTGTAATTGTTTCTGTGGACAAAGACGAAGGGGATAGAAA
GACCAAGCCAGATGAATGGAAGGAGAGAAGGAGGTATATATTTTTTATGG
TTGCAAGAGAGGCCAAGCTGAGGGTTTGCTGCTTGCTGGAGCTAGGAATG
TGAGATCTGGCTCTGGGCCAAATAATCACAACAATTTTGTGCTTGTACAT
GTGGAGGGGTTGAAGTAGGGGGATGGGGTTTGGAATTAGGGGAAGAGGAG
AGAGCAGGAGCAGGACGAAGAGCAGTGGGCGCAAATGTGTGTTTGGCCTG
CATGCTTTTTAAATTATAAAAATGTATGATAGAACACGATTTTGCCACTT
CTAACAAATGTTTATATTCTTGTATGGATGTTCAGATCGATCTACCTATT
TTCCCTTCTCCTCAGACCTCGTTGCCACGCCGCTATGTCGTGACTGCTCA
AAAAAGGGAAATGACGCCCTCGTATGGCACACTGATTCGTGGGTAGAATG
AATGAAAATTGATGGGGAGGAAGACGAAGAGGGGGAAGGCAGTGAGGGGT
AGATGGAGAGAAGAATTCACGGCGGATTTTGACTGTGCGTACGCAGCTTC
TCCTATCGACACTGATCGCAGCAACAAACAACGTAGATGCCGACCGAGAC
TGGCGTGGAGATACTAGAAGGCGGGATAGTGAGAAATGGCAAAGAACAGG
ACGAAGCCTGAAAGTTCAG back to topCoding sequence (CDS) from alignment at chr14:611026..613394+ >NO14G02000.1 ID=NO14G02000.1|Name=NO14G02000.1|organism=Nannochloropsis oceanica|type=CDS|length=1410bp|location=Sequence derived from alignment at chr14:611026..613394+ (Nannochloropsis oceanica) ATGGCGCCCTTTTTGTACAGCCCGCCACGAAATCTGGTCCGGGCCGAGGA ATTTGTCGTGGCGGCAGGAGTGCGGAGGAGCAGTCGCTTCACCTTGTGGC GGACAGTGTCCGGGCGGATAGGAGGGGAACCTCGATCGATCGCGCGCACA GGACGAATGGATAAGGAGGAGCATGCACAGGCAGAGAAGGAAGAAGGCGA GAGGGCGGCCAAGGAAGAGGAGATACACCAAGAGAAGCTTCGATTGGCAG AGCTGGAGGCTGAAGGAAAGGGGCATCCGCCCATGGAGGTCAAGGTGGGC TTCCAGCAACGGTGGCGAGAACGCTTTTTCCTGACCTCGTATGTGTTGGA CGCCGTAATCTGCGCAGCCTACGACCAAGTTCTCCTGCCCCAGACACAAG GCAGTAAGCGACCTGTACTCCTTGTGCCTGGATGGTGCGGTCGAACGCGG AGCTTTCGGAAGATGGCGGAACGGTTGGCGGCGGAGGGGTACCCTGTTTA TCCCGTGCCTTTGGGGTCGCAGCTTGGGTGCATTGATCGTAAGGCGAGCT TGCTAACCACGTTTTTAGACAGACACGGCTTGGAGGACGTGTATGTGGTG GCACATTCCATGGGGGGGCTGATAAGCGTGCGGAGTATGATGAAAGGAGA GACACGAATTAGACGGTTGATCACCATGGGGACGCCTTTCCGCGGCACCC ACGTCATCTACCTCGGGTACCTAGTCACGTTTGCCTTGGTAATCGCCCTA TCCTTCTGGCTGAGCCCCTTGGCAGGGACGATTTATTTGACGTTATTCAT CCAGATCCCTTCTCTATGGCAGATGCAGCCCAGCTCGGGTTTCCTCTCGG AGACACTCGAGTACCTCTCTCGTGTCGCGACGCCTGTCCAGTGTGTCTAT GCCGTCAGGGACCAGATTGTGATTCACAATTGGCGGCAGGCCTGGAGTCC TACGCGGTTGGGGAGGACGGATGATTTGTGTTTACCAGAGTATGGGCATA TGAATTTGTTCATGGGTGCGTCCGGGATTGAGCTCGTGGCACGGTTGCTG GCACACTATGAGGCCACTGCTGCTGCTACTGCTGCTGCTGCTGCTCGGAC TACTGCTCCGACTGAAGCCTCTGCTGTTCCTCTTTTCTCGAAGAAAACAA ATGAATGTAATCAGGAGGAGATTGGCGAGGAGGAGGAGAAGGAGGAGGAG GAAGAGGAGGAAGAGGAGGAAGAGGAGGAGCAGGAGGAGGAGCAGGAGGG GGGGAGAGTGAATGCTCAGCAGCAGCGGCCGCAGCATTCGCTGGAAAAGC GATTGGAGGCGGCGAATGGTATGTGGGGAGGGAGGGGGATCTTTGGGCAT GCTACGGGAGCAGGGGGATCATTCCGTACCGGGAAAAGAAGAATGATGGA GGATGAGTAA back to top
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