NO14G02000.1, NO14G02000.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G02000.1
Unique NameNO14G02000.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2369
Alignment locationchr14:611026..613394 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:611026..613394 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO14G02000.1 vs.
Match: EWM24611.1 (hydrolase or acyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 488.0 bits (1255), Expect = 3.200e-134
Identity = 259/379 (68.34%), Postives = 291/379 (76.78%), Query Frame = 0
Query:    1 MAPFLYSPPRNLVRAEEFVVAAGVRRSSRFTLWRTVSGRIG--GEPRSIARTGRMDKEEHAQAEKEEGERAAKEEEIHQEKLRLAELEAEGKGHPPMEVKVGFQQRWRERFFLTSYVLDAVICAAYDQVLLPQTQGSKRPVLLVPGWCGRTRSFRKMAERLAAEGYPVYPVPLGSQLGCIDRKASLLTTFLDRHGLEDVYVVAHSMGGLISVRSMMKGETRIRRLITMGTPFRGTHVIYLGYLVTFALVIALSFWLSPLAGTIYLTLFIQIPSLWQMQPSSGFLSETLEYLSRVATPVQCVYAVRDQIVIHNWRQAWSPTRLGRTDDLCLPEYGHMNLFMGASGIELVARLLAHYEATAAA--TAAAAARTTAPTEASA 376
            MAPFL SPP  +VRAE+  V AGVRRS RF L+R  SGRI   G PR + RTG +D     +     GE                  E + +G   + + +G +QRWRER FL SY+ DA++CAA+D VL P  +GSKRPVLLVPGWCGRTRSFRKMAERL  EGYPVYPVPLGSQLGCIDRKA L++ FLD HGLEDVYVVAHSMGGLISVRSMMKGETRIR+L+TMGTP+RGTHVIYLGY VT ALV+ALSFWLSPLAGTIYL LF+QIPSL+QMQPSS FL ETLEYL+RVATPVQC+YAVRDQIVIH+WRQAWSPTRLGR DDLCL EYGHMNLFMG SGIELVARLL  Y+A  A+  ++     TTA  E  A
Sbjct:    1 MAPFLGSPPPTVVRAEKAAVEAGVRRSERFNLFRIASGRIRNRGTPRHLIRTGALDDGGAPRVGGARGEGVCGPFGRQCP-------EIDARGLTSVTLNIGMRQRWRERMFLASYIADALVCAAHDLVLSPHKEGSKRPVLLVPGWCGRTRSFRKMAERLVREGYPVYPVPLGSQLGCIDRKARLVSKFLDLHGLEDVYVVAHSMGGLISVRSMMKGETRIRKLVTMGTPYRGTHVIYLGYAVTLALVLALSFWLSPLAGTIYLALFLQIPSLYQMQPSSDFLEETLEYLNRVATPVQCIYAVRDQIVIHDWRQAWSPTRLGRPDDLCLLEYGHMNLFMGESGIELVARLLERYDAADASLPSSRCVEGTTASVEKGA 372          
The following BLAST results are available for this feature:
BLAST of NO14G02000.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM24611.13.200e-13468.34hydrolase or acyltransferase [Nannochloropsis gadi... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02000NO14G02000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G02000.1NO14G02000.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G02000.1.cds1NO14G02000.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G02000.1 ID=NO14G02000.1|Name=NO14G02000.1|organism=Nannochloropsis oceanica|type=mRNA|length=2369bp
CGACAGAAGAGCGTCAGGGGGCTTTGTCAGCCGACCAAAATAAATCTGTT
GTTCTGAGGCCTGGAGTTGCGAGGGCGAGCAAGTGGCTACAGTAGCAAAG
AGATACATACACCTGCACCAAGCATGGCGCCCTTTTTGTACAGCCCGCCA
CGAAATCTGGTCCGGGCCGAGGAATTTGTCGTGGCGGCAGGAGTGCGGAG
GAGCAGTCGCTTCACCTTGTGGCGGACAGTGTCCGGGCGGATAGGAGGGG
AACCTCGATCGATCGCGCGCACAGGACGAATGGATAAGGAGGAGCATGCA
CAGGCAGAGAAGGAAGAAGGCGAGAGGGCGGCCAAGGAAGAGGAGATACA
CCAAGAGAAGCTTCGATTGGCAGAGCTGGAGGCTGAAGGAAAGGGGCATC
CGCCCATGGAGGTCAAGGTGGGCTTCCAGCAACGGTGGCGAGAACGCTTT
TTCCTGACCTCGTATGTGTTGGACGCCGTAATCTGCGCAGCCTACGACCA
AGTTCTCCTGCCCCAGACACAAGGCAGTAAGCGACCTGTACTCCTTGTGC
CTGGATGGTGCGGTCGAACGCGGAGCTTTCGGAAGATGGCGGAACGGTTG
GCGGCGGAGGGGTACCCTGTTTATCCCGTGCCTTTGGGGTCGCAGCTTGG
GTGCATTGATCGTAAGGCGAGCTTGCTAACCACGTTTTTAGACAGACACG
GCTTGGAGGACGTGTATGTGGTGGCACATTCCATGGGGGGGCTGATAAGC
GTGCGGAGTATGATGAAAGGAGAGACACGAATTAGACGGTTGATCACCAT
GGGGACGCCTTTCCGCGGCACCCACGTCATCTACCTCGGGTACCTAGTCA
CGTTTGCCTTGGTAATCGCCCTATCCTTCTGGCTGAGCCCCTTGGCAGGG
ACGATTTATTTGACGTTATTCATCCAGATCCCTTCTCTATGGCAGATGCA
GCCCAGCTCGGGTTTCCTCTCGGAGACACTCGAGTACCTCTCTCGTGTCG
CGACGCCTGTCCAGTGTGTCTATGCCGTCAGGGACCAGATTGTGATTCAC
AATTGGCGGCAGGCCTGGAGTCCTACGCGGTTGGGGAGGACGGATGATTT
GTGTTTACCAGAGTATGGGCATATGAATTTGTTCATGGGTGCGTCCGGGA
TTGAGCTCGTGGCACGGTTGCTGGCACACTATGAGGCCACTGCTGCTGCT
ACTGCTGCTGCTGCTGCTCGGACTACTGCTCCGACTGAAGCCTCTGCTGT
TCCTCTTTTCTCGAAGAAAACAAATGAATGTAATCAGGAGGAGATTGGCG
AGGAGGAGGAGAAGGAGGAGGAGGAAGAGGAGGAAGAGGAGGAAGAGGAG
GAGCAGGAGGAGGAGCAGGAGGGGGGGAGAGTGAATGCTCAGCAGCAGCG
GCCGCAGCATTCGCTGGAAAAGCGATTGGAGGCGGCGAATGGTATGTGGG
GAGGGAGGGGGATCTTTGGGCATGCTACGGGAGCAGGGGGATCATTCCGT
ACCGGGAAAAGAAGAATGATGGAGGATGAGTAAGGCGAAGGAGTGGGAGT
AAGGAGGAAGGCTTTGATGAAGATTTTTGTGTAAAATGGTCACAAAGAGT
AGGGCAGAAAGGGAGGGAGGGGGAAAAATATCCACACTCACGTCTCCAGA
AGATTTCATCGTGTAATTGTTTCTGTGGACAAAGACGAAGGGGATAGAAA
GACCAAGCCAGATGAATGGAAGGAGAGAAGGAGGTATATATTTTTTATGG
TTGCAAGAGAGGCCAAGCTGAGGGTTTGCTGCTTGCTGGAGCTAGGAATG
TGAGATCTGGCTCTGGGCCAAATAATCACAACAATTTTGTGCTTGTACAT
GTGGAGGGGTTGAAGTAGGGGGATGGGGTTTGGAATTAGGGGAAGAGGAG
AGAGCAGGAGCAGGACGAAGAGCAGTGGGCGCAAATGTGTGTTTGGCCTG
CATGCTTTTTAAATTATAAAAATGTATGATAGAACACGATTTTGCCACTT
CTAACAAATGTTTATATTCTTGTATGGATGTTCAGATCGATCTACCTATT
TTCCCTTCTCCTCAGACCTCGTTGCCACGCCGCTATGTCGTGACTGCTCA
AAAAAGGGAAATGACGCCCTCGTATGGCACACTGATTCGTGGGTAGAATG
AATGAAAATTGATGGGGAGGAAGACGAAGAGGGGGAAGGCAGTGAGGGGT
AGATGGAGAGAAGAATTCACGGCGGATTTTGACTGTGCGTACGCAGCTTC
TCCTATCGACACTGATCGCAGCAACAAACAACGTAGATGCCGACCGAGAC
TGGCGTGGAGATACTAGAAGGCGGGATAGTGAGAAATGGCAAAGAACAGG
ACGAAGCCTGAAAGTTCAG
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protein sequence of NO14G02000.1

>NO14G02000.1-protein ID=NO14G02000.1-protein|Name=NO14G02000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=470bp
MAPFLYSPPRNLVRAEEFVVAAGVRRSSRFTLWRTVSGRIGGEPRSIART
GRMDKEEHAQAEKEEGERAAKEEEIHQEKLRLAELEAEGKGHPPMEVKVG
FQQRWRERFFLTSYVLDAVICAAYDQVLLPQTQGSKRPVLLVPGWCGRTR
SFRKMAERLAAEGYPVYPVPLGSQLGCIDRKASLLTTFLDRHGLEDVYVV
AHSMGGLISVRSMMKGETRIRRLITMGTPFRGTHVIYLGYLVTFALVIAL
SFWLSPLAGTIYLTLFIQIPSLWQMQPSSGFLSETLEYLSRVATPVQCVY
AVRDQIVIHNWRQAWSPTRLGRTDDLCLPEYGHMNLFMGASGIELVARLL
AHYEATAAATAAAAARTTAPTEASAVPLFSKKTNECNQEEIGEEEEKEEE
EEEEEEEEEEQEEEQEGGRVNAQQQRPQHSLEKRLEAANGMWGGRGIFGH
ATGAGGSFRTGKRRMMEDE*
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mRNA from alignment at chr14:611026..613394+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G02000.1 ID=NO14G02000.1|Name=NO14G02000.1|organism=Nannochloropsis oceanica|type=mRNA|length=2369bp|location=Sequence derived from alignment at chr14:611026..613394+ (Nannochloropsis oceanica)
CGACAGAAGAGCGTCAGGGGGCTTTGTCAGCCGACCAAAATAAATCTGTT GTTCTGAGGCCTGGAGTTGCGAGGGCGAGCAAGTGGCTACAGTAGCAAAG AGATACATACACCTGCACCAAGCATGGCGCCCTTTTTGTACAGCCCGCCA CGAAATCTGGTCCGGGCCGAGGAATTTGTCGTGGCGGCAGGAGTGCGGAG GAGCAGTCGCTTCACCTTGTGGCGGACAGTGTCCGGGCGGATAGGAGGGG AACCTCGATCGATCGCGCGCACAGGACGAATGGATAAGGAGGAGCATGCA CAGGCAGAGAAGGAAGAAGGCGAGAGGGCGGCCAAGGAAGAGGAGATACA CCAAGAGAAGCTTCGATTGGCAGAGCTGGAGGCTGAAGGAAAGGGGCATC CGCCCATGGAGGTCAAGGTGGGCTTCCAGCAACGGTGGCGAGAACGCTTT TTCCTGACCTCGTATGTGTTGGACGCCGTAATCTGCGCAGCCTACGACCA AGTTCTCCTGCCCCAGACACAAGGCAGTAAGCGACCTGTACTCCTTGTGC CTGGATGGTGCGGTCGAACGCGGAGCTTTCGGAAGATGGCGGAACGGTTG GCGGCGGAGGGGTACCCTGTTTATCCCGTGCCTTTGGGGTCGCAGCTTGG GTGCATTGATCGTAAGGCGAGCTTGCTAACCACGTTTTTAGACAGACACG GCTTGGAGGACGTGTATGTGGTGGCACATTCCATGGGGGGGCTGATAAGC GTGCGGAGTATGATGAAAGGAGAGACACGAATTAGACGGTTGATCACCAT GGGGACGCCTTTCCGCGGCACCCACGTCATCTACCTCGGGTACCTAGTCA CGTTTGCCTTGGTAATCGCCCTATCCTTCTGGCTGAGCCCCTTGGCAGGG ACGATTTATTTGACGTTATTCATCCAGATCCCTTCTCTATGGCAGATGCA GCCCAGCTCGGGTTTCCTCTCGGAGACACTCGAGTACCTCTCTCGTGTCG CGACGCCTGTCCAGTGTGTCTATGCCGTCAGGGACCAGATTGTGATTCAC AATTGGCGGCAGGCCTGGAGTCCTACGCGGTTGGGGAGGACGGATGATTT GTGTTTACCAGAGTATGGGCATATGAATTTGTTCATGGGTGCGTCCGGGA TTGAGCTCGTGGCACGGTTGCTGGCACACTATGAGGCCACTGCTGCTGCT ACTGCTGCTGCTGCTGCTCGGACTACTGCTCCGACTGAAGCCTCTGCTGT TCCTCTTTTCTCGAAGAAAACAAATGAATGTAATCAGGAGGAGATTGGCG AGGAGGAGGAGAAGGAGGAGGAGGAAGAGGAGGAAGAGGAGGAAGAGGAG GAGCAGGAGGAGGAGCAGGAGGGGGGGAGAGTGAATGCTCAGCAGCAGCG GCCGCAGCATTCGCTGGAAAAGCGATTGGAGGCGGCGAATGGTATGTGGG GAGGGAGGGGGATCTTTGGGCATGCTACGGGAGCAGGGGGATCATTCCGT ACCGGGAAAAGAAGAATGATGGAGGATGAGTAAGGCGAAGGAGTGGGAGT AAGGAGGAAGGCTTTGATGAAGATTTTTGTGTAAAATGGTCACAAAGAGT AGGGCAGAAAGGGAGGGAGGGGGAAAAATATCCACACTCACGTCTCCAGA AGATTTCATCGTGTAATTGTTTCTGTGGACAAAGACGAAGGGGATAGAAA GACCAAGCCAGATGAATGGAAGGAGAGAAGGAGGTATATATTTTTTATGG TTGCAAGAGAGGCCAAGCTGAGGGTTTGCTGCTTGCTGGAGCTAGGAATG TGAGATCTGGCTCTGGGCCAAATAATCACAACAATTTTGTGCTTGTACAT GTGGAGGGGTTGAAGTAGGGGGATGGGGTTTGGAATTAGGGGAAGAGGAG AGAGCAGGAGCAGGACGAAGAGCAGTGGGCGCAAATGTGTGTTTGGCCTG CATGCTTTTTAAATTATAAAAATGTATGATAGAACACGATTTTGCCACTT CTAACAAATGTTTATATTCTTGTATGGATGTTCAGATCGATCTACCTATT TTCCCTTCTCCTCAGACCTCGTTGCCACGCCGCTATGTCGTGACTGCTCA AAAAAGGGAAATGACGCCCTCGTATGGCACACTGATTCGTGGGTAGAATG AATGAAAATTGATGGGGAGGAAGACGAAGAGGGGGAAGGCAGTGAGGGGT AGATGGAGAGAAGAATTCACGGCGGATTTTGACTGTGCGTACGCAGCTTC TCCTATCGACACTGATCGCAGCAACAAACAACGTAGATGCCGACCGAGAC TGGCGTGGAGATACTAGAAGGCGGGATAGTGAGAAATGGCAAAGAACAGG ACGAAGCCTGAAAGTTCAG
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Coding sequence (CDS) from alignment at chr14:611026..613394+

>NO14G02000.1 ID=NO14G02000.1|Name=NO14G02000.1|organism=Nannochloropsis oceanica|type=CDS|length=1410bp|location=Sequence derived from alignment at chr14:611026..613394+ (Nannochloropsis oceanica)
ATGGCGCCCTTTTTGTACAGCCCGCCACGAAATCTGGTCCGGGCCGAGGA
ATTTGTCGTGGCGGCAGGAGTGCGGAGGAGCAGTCGCTTCACCTTGTGGC
GGACAGTGTCCGGGCGGATAGGAGGGGAACCTCGATCGATCGCGCGCACA
GGACGAATGGATAAGGAGGAGCATGCACAGGCAGAGAAGGAAGAAGGCGA
GAGGGCGGCCAAGGAAGAGGAGATACACCAAGAGAAGCTTCGATTGGCAG
AGCTGGAGGCTGAAGGAAAGGGGCATCCGCCCATGGAGGTCAAGGTGGGC
TTCCAGCAACGGTGGCGAGAACGCTTTTTCCTGACCTCGTATGTGTTGGA
CGCCGTAATCTGCGCAGCCTACGACCAAGTTCTCCTGCCCCAGACACAAG
GCAGTAAGCGACCTGTACTCCTTGTGCCTGGATGGTGCGGTCGAACGCGG
AGCTTTCGGAAGATGGCGGAACGGTTGGCGGCGGAGGGGTACCCTGTTTA
TCCCGTGCCTTTGGGGTCGCAGCTTGGGTGCATTGATCGTAAGGCGAGCT
TGCTAACCACGTTTTTAGACAGACACGGCTTGGAGGACGTGTATGTGGTG
GCACATTCCATGGGGGGGCTGATAAGCGTGCGGAGTATGATGAAAGGAGA
GACACGAATTAGACGGTTGATCACCATGGGGACGCCTTTCCGCGGCACCC
ACGTCATCTACCTCGGGTACCTAGTCACGTTTGCCTTGGTAATCGCCCTA
TCCTTCTGGCTGAGCCCCTTGGCAGGGACGATTTATTTGACGTTATTCAT
CCAGATCCCTTCTCTATGGCAGATGCAGCCCAGCTCGGGTTTCCTCTCGG
AGACACTCGAGTACCTCTCTCGTGTCGCGACGCCTGTCCAGTGTGTCTAT
GCCGTCAGGGACCAGATTGTGATTCACAATTGGCGGCAGGCCTGGAGTCC
TACGCGGTTGGGGAGGACGGATGATTTGTGTTTACCAGAGTATGGGCATA
TGAATTTGTTCATGGGTGCGTCCGGGATTGAGCTCGTGGCACGGTTGCTG
GCACACTATGAGGCCACTGCTGCTGCTACTGCTGCTGCTGCTGCTCGGAC
TACTGCTCCGACTGAAGCCTCTGCTGTTCCTCTTTTCTCGAAGAAAACAA
ATGAATGTAATCAGGAGGAGATTGGCGAGGAGGAGGAGAAGGAGGAGGAG
GAAGAGGAGGAAGAGGAGGAAGAGGAGGAGCAGGAGGAGGAGCAGGAGGG
GGGGAGAGTGAATGCTCAGCAGCAGCGGCCGCAGCATTCGCTGGAAAAGC
GATTGGAGGCGGCGAATGGTATGTGGGGAGGGAGGGGGATCTTTGGGCAT
GCTACGGGAGCAGGGGGATCATTCCGTACCGGGAAAAGAAGAATGATGGA
GGATGAGTAA
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Synonyms
Publications