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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr14 | genome | chr14:527861..530485 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G01710.2 vs.
Match: EWM24663.1 (peptidase u34 dipeptidase [Nannochloropsis gaditana]) HSP 1 Score: 787.3 bits (2032), Expect = 2.800e-224 Identity = 370/501 (73.85%), Postives = 429/501 (85.63%), Query Frame = 0
Query: 10 QFFPRSNHSSGDKIKVTDWDSGEYRGVIDQVPLTYNVIGNVNEYGLCITESTWGGLEELASQPDAILDYGSLIYIALQRATSARQALKIMTDLVTEYGYASEGESFTVADPDEVWILEMIGKGGYEKGAVWAAQRIPNGYISAHANQARICSLFPEGNEDEILYSDDAIAFARHIGRFPSDAPDEAFSFSDVYNPLTFETARGCEGRVWDFFHRATAADASIMGPYLDYALGFNLTNRMPLYIKPLAPLRTSDILEAMRSHYEDTPLSFNTDVGAEAFGLPYRWRPLTWTASDGQTYFHERAAATQQTGFNLLAQLRRDMPDPIKALQLFAVDDTDSSVMTPVYGGQTRVPPSYGPGDIAVFEPEKAFWVFNMVANFAYTRYSLIHPDVKQRQKVREEKHQELAASIDNEFVRLWAEDEDKALAMMTNRCVGNAEDLVAEWRKFFGELFVKFMDGNVKTKEDPRQLLPTVKQPGYCIEWRDRVVQETGDRFRVPVAIETME 511
QF+PRS HS G+ I VTDWDSG +RGVI QVPLTYNV+GNVNE+GLCITESTWGGL ELA QP AILDYGSLIYI LQRA SA++AL++MTDLV EYGYASEGE+FTVADP+EVW+LEMIGKG + KGAVWAA+RIP+GYISAHANQARI +L EG D++L+SDD I FAR IGRFP++A D+ FSFSDVYNP+T+ AR CEGRVWDFF RATAAD SIMGPYLDY G NLT RMPLYIKP+APL TSDI++AMRSHYE+TPL+F+ DVGAEAFGLPYRWRPLTW DG+T+F+ERAAATQQTGF+LLAQLRR +PDPIKALQ FAVDDTDSSVM PVYGG VPPSYGPG I+VFEPEKAFW FNMVANFAY RY++I+PDV++RQ E + +LA ID EF RLW ED+ KA+AMMT CV NAE LV EWR+F+GELFVKFMDGN+KTK++P QLLP V+QPGY +EWR+R+V+ETG+R+R P + T +
Sbjct: 55 QFWPRSRHSDGEVINVTDWDSGLFRGVIRQVPLTYNVVGNVNEFGLCITESTWGGLAELAHQPGAILDYGSLIYITLQRAASAQEALQVMTDLVAEYGYASEGETFTVADPEEVWVLEMIGKGEHGKGAVWAAKRIPDGYISAHANQARIQTLESEGI-DQVLFSDDVIDFARRIGRFPTEAQDDLFSFSDVYNPITYLAARACEGRVWDFFRRATAADQSIMGPYLDYVTGRNLTKRMPLYIKPVAPLSTSDIVDAMRSHYENTPLAFDQDVGAEAFGLPYRWRPLTWQLDDGRTFFNERAAATQQTGFSLLAQLRRGVPDPIKALQFFAVDDTDSSVMIPVYGGMALVPPSYGPGSISVFEPEKAFWAFNMVANFAYARYAIINPDVRRRQGALEAQQWKLAVEIDEEFTRLWGEDQIKAVAMMTTACVSNAESLVLEWRRFYGELFVKFMDGNIKTKDNPEQLLPDVEQPGYRLEWRERIVRETGERYRFPADMFTSQ 554
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G01710.2 ID=NO14G01710.2|Name=NO14G01710.2|organism=Nannochloropsis oceanica|type=mRNA|length=2446bp
AATCTTTCTCTGCTTGGTTCTTTTTGTTCACGCGTTTCCGTAACATCTCC
TGAAAGTGCACGCACCTCCACATATGATTTTCTGCGTTTCCTAGAATTAC
TTTGACTACATAGTGTATGTCATAGTGTCCTCCCTTCTCCGCGCATATAT
CAGCGAAAAGTAGTTACTCAAATGAAAAAAAAAACACCTTCTCATGCACC
TGGAGTAATGGCACCTCGACCACAATTCATTGACCGGTCTCAGCCACACT
ACCCGTAGAGCAGCCGTGGTGGCAGAGCCATCACATACTCGACTGCAAAC
CACGACCCAAAATTGTCCGACATCCGAGTCGGAACCTCCGACGACAGTCT
GTTGGAACCGAACAACCGAACAAATTCATTGTCAAATATACGAAGGCTAC
CAGGTGCAGAGCAGGCCTTCTTGTTTTCTCATCGCACATTTATCCTCTTT
TCTCCCTCATTATTCGCACTCAAACGTTCCCTCCTCCCTACTTCGATGAG
CGCTAATATGCGGTACTGGCGGCTGCGGGCGTCGCTGCTCTTGCTGCTGG
CTGTATTTTTGCCGTGGGTCGAAGGCTGCTCGTGCTTCATTGTCACTTCG
GGCGCGTCACAAACCGAGACTTTGCAAGTCACCTATGCGGCGGACTCCCA
TACTTTGTATGGGTATCTTCAGGAAGCCTGTCCCGTATATATATGAAAAC
ACCCGTCCGCATGAATACGCAGTTCTTCCCTCGCAGTAATCATTCATCTG
GGGATAAAATCAAAGTGACGGACTGGGATTCAGGTGAATATCGAGGCGTC
ATTGATCAGGTGCCTTTAACATATAATGTTATCGGAAACGTCAATGAATA
TGGGTTGTGCATCACGGAATCGACCTGGGGAGGCCTTGAGGAGCTAGCGA
GTCAGCCCGATGCAATCCTTGACTACGGCTCGCTTATCTATATCGCTCTT
CAGCGTGCTACTTCCGCGCGTCAAGCACTTAAAATCATGACAGATCTTGT
CACCGAGTATGGATACGCTTCGGAAGGAGAAAGCTTCACGGTGGCTGATC
CTGATGAGGTGTGGATCTTGGAGATGATTGGGAAGGGTGGGTACGAGAAA
GGTGCCGTCTGGGCGGCGCAACGGATCCCAAATGGCTACATCTCTGCCCA
TGCGAACCAGGCACGCATTTGCAGTCTATTTCCAGAGGGTAACGAGGATG
AGATTCTGTACTCGGACGATGCGATTGCATTTGCCCGTCATATTGGCCGC
TTTCCCTCTGACGCTCCCGACGAGGCCTTTTCGTTCAGCGATGTGTACAA
TCCTTTGACTTTTGAAACCGCGAGAGGATGTGAGGGCCGTGTCTGGGATT
TCTTCCATCGTGCCACGGCTGCTGATGCGTCCATCATGGGACCCTATCTC
GATTATGCTTTGGGTTTTAATTTGACGAATCGTATGCCCCTGTACATCAA
GCCGCTGGCGCCGCTGCGGACCTCGGACATCCTTGAGGCCATGCGTAGCC
ACTACGAAGATACACCCTTGTCCTTCAACACGGACGTGGGTGCGGAGGCG
TTCGGTCTCCCTTACCGCTGGCGACCTTTGACGTGGACAGCGAGTGACGG
CCAAACGTACTTCCATGAACGTGCAGCCGCCACGCAGCAAACTGGATTCA
ATCTCTTGGCACAACTACGTCGTGACATGCCCGATCCGATCAAGGCTCTG
CAACTGTTTGCGGTGGACGATACGGACTCTTCGGTCATGACTCCTGTTTA
TGGCGGCCAAACGCGTGTCCCCCCTAGCTACGGTCCTGGGGATATCGCGG
TATTTGAGCCGGAGAAGGCATTTTGGGTCTTCAATATGGTTGCAAACTTT
GCCTATACCCGCTACTCTCTAATCCATCCGGATGTCAAGCAACGGCAAAA
AGTCCGAGAAGAAAAGCACCAAGAGCTTGCAGCCTCGATCGACAACGAGT
TTGTTCGACTGTGGGCTGAAGATGAGGACAAGGCGCTCGCCATGATGACG
AACAGATGTGTAGGCAATGCCGAGGACCTTGTGGCTGAATGGAGGAAGTT
TTTTGGGGAATTGTTCGTAAAATTCATGGACGGAAATGTCAAGACGAAGG
AGGATCCACGACAGCTTTTGCCGACAGTCAAGCAACCCGGCTATTGCATT
GAATGGCGAGACCGTGTTGTTCAAGAGACGGGGGACCGATTTCGAGTGCC
AGTAGCGATAGAGACAATGGAGGCAAGGGGATAACCTGCGGTAGAAACGT
GAGTGCGAGTTCTTCGAAGGTTTATTCCGAAAAGGTTAGACTTTGGATGA
TAAGAAGAATAAGTGTCAATAGAATAGTCACGACAAAGGGAAGGAAGTGT
TGAAAGGGAAGGCTAAGGGGACATTGTGTACACTGAAATGAGAAGAAAGA
AAAAAATCGAACACAAAATACACCTCACCTTTTGCGTACTATCCAG back to topprotein sequence of NO14G01710.2 >NO14G01710.2-protein ID=NO14G01710.2-protein|Name=NO14G01710.2|organism=Nannochloropsis oceanica|type=polypeptide|length=514bp
MKTPVRMNTQFFPRSNHSSGDKIKVTDWDSGEYRGVIDQVPLTYNVIGNV
NEYGLCITESTWGGLEELASQPDAILDYGSLIYIALQRATSARQALKIMT
DLVTEYGYASEGESFTVADPDEVWILEMIGKGGYEKGAVWAAQRIPNGYI
SAHANQARICSLFPEGNEDEILYSDDAIAFARHIGRFPSDAPDEAFSFSD
VYNPLTFETARGCEGRVWDFFHRATAADASIMGPYLDYALGFNLTNRMPL
YIKPLAPLRTSDILEAMRSHYEDTPLSFNTDVGAEAFGLPYRWRPLTWTA
SDGQTYFHERAAATQQTGFNLLAQLRRDMPDPIKALQLFAVDDTDSSVMT
PVYGGQTRVPPSYGPGDIAVFEPEKAFWVFNMVANFAYTRYSLIHPDVKQ
RQKVREEKHQELAASIDNEFVRLWAEDEDKALAMMTNRCVGNAEDLVAEW
RKFFGELFVKFMDGNVKTKEDPRQLLPTVKQPGYCIEWRDRVVQETGDRF
RVPVAIETMEARG* back to topmRNA from alignment at chr14:527861..530485+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G01710.2 ID=NO14G01710.2|Name=NO14G01710.2|organism=Nannochloropsis oceanica|type=mRNA|length=2625bp|location=Sequence derived from alignment at chr14:527861..530485+ (Nannochloropsis oceanica)
AATCTTTCTCTGCTTGGTTCTTTTTGTTCACGCGTTTCCGTAACATCTCC
TGAAAGTGCACGCACCTCCACATATGATTTTCTGCGTTTCCTAGAATTAC
TTTGACTACATAGTGTATGTCATAGTGTCCTCCCTTCTCCGCGCATATAT
CAGCGAAAAGTAGTTACTCAAATGAAAAAAAAAACACCTTCTCATGCACC
TGGAGTAATGGCACCTCGACCACAATTCATTGACCGGTCTCAGCCACACT
ACCCGTAGAGCAGCCGTGGTGGCAGAGCCATCACATACTCGACTGCAAAC
CACGACCCAAAATTGTCCGACATCCGAGTCGGAACCTCCGACGACAGTCT
GTTGGAACCGAACAACCGAACAAATTCATTGTCAAATATACGAAGGCTAC
CAGGTGCAGAGCAGGCCTTCTTGTTTTCTCATCGCACATTTATCCTCTTT
TCTCCCTCATTATTCGCACTCAAACGTTCCCTCCTCCCTACTTCGATGAG
CGCTAATATGCGGTACTGGCGGCTGCGGGCGTCGCTGCTCTTGCTGCTGG
CTGTATTTTTGCCGTGGGTCGAAGGCTGCTCGTGCTTCATTGTCACTTCG
GGCGCGTCACAAACCGAGACTTTGCAAGTCACCTATGCGGCGGACTCCCA
TACTTTGTATGGGTATCTTCAGGTAAGGATTGGGCACGGAATTCTCCCCG
GGGAGCATCTTTTACGGTTGGGCTCATGTGCGGGCCTAACGTTAGGAAGC
CTGTCCCGTATATATATGAAAACACCCGTCCGCATGAATACGCAGTTCTT
CCCTCGCAGTAATCATTCATCTGGGGATAAAATCAAAGTGACGGACTGGG
ATTCAGGTGAATATCGAGGCGTCATTGATCAGGTAAATACATCCTCCCCA
CCCACAAGCGCCCTCATGCCTTTTGAGAGTGTACTTCTGTGTATCAACGC
CCCAGCCCCATCGTCTGTCGAATTCACTCTTGCCTCAGGTGCCTTTAACA
TATAATGTTATCGGAAACGTCAATGAATATGGGTTGTGCATCACGGAATC
GACCTGGGGAGGCCTTGAGGAGCTAGCGAGTCAGCCCGATGCAATCCTTG
ACTACGGCTCGCTTATCTATATCGCTCTTCAGCGTGCTACTTCCGCGCGT
CAAGCACTTAAAATCATGACAGATCTTGTCACCGAGTATGGATACGCTTC
GGAAGGAGAAAGCTTCACGGTGGCTGATCCTGATGAGGTGTGGATCTTGG
AGATGATTGGGAAGGGTGGGTACGAGAAAGGTGCCGTCTGGGCGGCGCAA
CGGATCCCAAATGGCTACATCTCTGCCCATGCGAACCAGGCACGCATTTG
CAGTCTATTTCCAGAGGGTAACGAGGATGAGATTCTGTACTCGGACGATG
CGATTGCATTTGCCCGTCATATTGGCCGCTTTCCCTCTGACGCTCCCGAC
GAGGCCTTTTCGTTCAGCGATGTGTACAATCCTTTGACTTTTGAAACCGC
GAGAGGATGTGAGGGCCGTGTCTGGGATTTCTTCCATCGTGCCACGGCTG
CTGATGCGTCCATCATGGGACCCTATCTCGATTATGCTTTGGGTTTTAAT
TTGACGAATCGTATGCCCCTGTACATCAAGCCGCTGGCGCCGCTGCGGAC
CTCGGACATCCTTGAGGCCATGCGTAGCCACTACGAAGATACACCCTTGT
CCTTCAACACGGACGTGGGTGCGGAGGCGTTCGGTCTCCCTTACCGCTGG
CGACCTTTGACGTGGACAGCGAGTGACGGCCAAACGTACTTCCATGAACG
TGCAGCCGCCACGCAGCAAACTGGATTCAATCTCTTGGCACAACTACGTC
GTGACATGCCCGATCCGATCAAGGCTCTGCAACTGTTTGCGGTGGACGAT
ACGGACTCTTCGGTCATGACTCCTGTTTATGGCGGCCAAACGCGTGTCCC
CCCTAGCTACGGTCCTGGGGATATCGCGGTATTTGAGCCGGAGAAGGCAT
TTTGGGTCTTCAATATGGTTGCAAACTTTGCCTATACCCGCTACTCTCTA
ATCCATCCGGATGTCAAGCAACGGCAAAAAGTCCGAGAAGAAAAGCACCA
AGAGCTTGCAGCCTCGATCGACAACGAGTTTGTTCGACTGTGGGCTGAAG
ATGAGGACAAGGCGCTCGCCATGATGACGAACAGATGTGTAGGCAATGCC
GAGGACCTTGTGGCTGAATGGAGGAAGTTTTTTGGGGAATTGTTCGTAAA
ATTCATGGACGGAAATGTCAAGACGAAGGAGGATCCACGACAGCTTTTGC
CGACAGTCAAGCAACCCGGCTATTGCATTGAATGGCGAGACCGTGTTGTT
CAAGAGACGGGGGACCGATTTCGAGTGCCAGTAGCGATAGAGACAATGGA
GGCAAGGGGATAACCTGCGGTAGAAACGTGAGTGCGAGTTCTTCGAAGGT
TTATTCCGAAAAGGTTAGACTTTGGATGATAAGAAGAATAAGTGTCAATA
GAATAGTCACGACAAAGGGAAGGAAGTGTTGAAAGGGAAGGCTAAGGGGA
CATTGTGTACACTGAAATGAGAAGAAAGAAAAAAATCGAACACAAAATAC
ACCTCACCTTTTGCGTACTATCCAG back to topCoding sequence (CDS) from alignment at chr14:527861..530485+ >NO14G01710.2 ID=NO14G01710.2|Name=NO14G01710.2|organism=Nannochloropsis oceanica|type=CDS|length=1542bp|location=Sequence derived from alignment at chr14:527861..530485+ (Nannochloropsis oceanica)
ATGAAAACACCCGTCCGCATGAATACGCAGTTCTTCCCTCGCAGTAATCA
TTCATCTGGGGATAAAATCAAAGTGACGGACTGGGATTCAGGTGAATATC
GAGGCGTCATTGATCAGGTGCCTTTAACATATAATGTTATCGGAAACGTC
AATGAATATGGGTTGTGCATCACGGAATCGACCTGGGGAGGCCTTGAGGA
GCTAGCGAGTCAGCCCGATGCAATCCTTGACTACGGCTCGCTTATCTATA
TCGCTCTTCAGCGTGCTACTTCCGCGCGTCAAGCACTTAAAATCATGACA
GATCTTGTCACCGAGTATGGATACGCTTCGGAAGGAGAAAGCTTCACGGT
GGCTGATCCTGATGAGGTGTGGATCTTGGAGATGATTGGGAAGGGTGGGT
ACGAGAAAGGTGCCGTCTGGGCGGCGCAACGGATCCCAAATGGCTACATC
TCTGCCCATGCGAACCAGGCACGCATTTGCAGTCTATTTCCAGAGGGTAA
CGAGGATGAGATTCTGTACTCGGACGATGCGATTGCATTTGCCCGTCATA
TTGGCCGCTTTCCCTCTGACGCTCCCGACGAGGCCTTTTCGTTCAGCGAT
GTGTACAATCCTTTGACTTTTGAAACCGCGAGAGGATGTGAGGGCCGTGT
CTGGGATTTCTTCCATCGTGCCACGGCTGCTGATGCGTCCATCATGGGAC
CCTATCTCGATTATGCTTTGGGTTTTAATTTGACGAATCGTATGCCCCTG
TACATCAAGCCGCTGGCGCCGCTGCGGACCTCGGACATCCTTGAGGCCAT
GCGTAGCCACTACGAAGATACACCCTTGTCCTTCAACACGGACGTGGGTG
CGGAGGCGTTCGGTCTCCCTTACCGCTGGCGACCTTTGACGTGGACAGCG
AGTGACGGCCAAACGTACTTCCATGAACGTGCAGCCGCCACGCAGCAAAC
TGGATTCAATCTCTTGGCACAACTACGTCGTGACATGCCCGATCCGATCA
AGGCTCTGCAACTGTTTGCGGTGGACGATACGGACTCTTCGGTCATGACT
CCTGTTTATGGCGGCCAAACGCGTGTCCCCCCTAGCTACGGTCCTGGGGA
TATCGCGGTATTTGAGCCGGAGAAGGCATTTTGGGTCTTCAATATGGTTG
CAAACTTTGCCTATACCCGCTACTCTCTAATCCATCCGGATGTCAAGCAA
CGGCAAAAAGTCCGAGAAGAAAAGCACCAAGAGCTTGCAGCCTCGATCGA
CAACGAGTTTGTTCGACTGTGGGCTGAAGATGAGGACAAGGCGCTCGCCA
TGATGACGAACAGATGTGTAGGCAATGCCGAGGACCTTGTGGCTGAATGG
AGGAAGTTTTTTGGGGAATTGTTCGTAAAATTCATGGACGGAAATGTCAA
GACGAAGGAGGATCCACGACAGCTTTTGCCGACAGTCAAGCAACCCGGCT
ATTGCATTGAATGGCGAGACCGTGTTGTTCAAGAGACGGGGGACCGATTT
CGAGTGCCAGTAGCGATAGAGACAATGGAGGCAAGGGGATAA back to top
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