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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr14 | genome | chr14:522158..524449 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G01690.1 vs.
Match: EWM24647.1 (calcium calmodulin-dependent protein kinase id [Nannochloropsis gaditana]) HSP 1 Score: 723.4 bits (1866), Expect = 7.400e-205 Identity = 431/759 (56.79%), Postives = 504/759 (66.40%), Query Frame = 0
Query: 1 MFAPPLHVSYKVYGKGAESHPDLDDRCLQVAMEDRHVQQQRQRERRLRQRDAVAIQKDKSCRTQGVEKVAEDGGSKEEEENARPEDGLFVFSPAQEGWLIKQGSGGLRIWRRRWVGLANRRLWYANGPAAPGGSGGGDC----PEKGSIGCMELTQWSRVVEEDCADGLSFRVIPGKPEDAYPSERVEVEEEICGAHSSDDEFDEGD--SGGTPTHSLDGVADAAPSTGEKEPLIS-PHQLTRKLHQRRSIVGSVVSSSSQGHGHVPTEGWWFRAESLQEKEVWMTKIRKSIALAEWWSALRFGPSLGEGGFSQVVEMLDMRNGERLAVKVMHVRRRMERDQALAETDILALVRKRIQHPHLMAPRRIYVEGCRVWIMFPLCRGGDLLQRLVSRGRGSEAEAAVVVSRLLSAVQALHQHGVLHLDIKPENVLFVKEEDLSQVLLTDFGLSRKMQPTNRLGMRSSRYGKGIIKKLEVRAAVSECVAGKEGWGGEEEEEEEEEGREEETEEGDDNEEKEDAEQDWDYLSRLRYNLAFDERVNGTIGYMAPEVILHKRYTPSADVWSLGVVLHICLVGYAPFQHQQQERQQEVGGSC----SSHQDALERSVRGEFVMDELDWARISPAAKDLTRRMLTVDETARITIADALRHPWVQHCTKKGEGVDTVG-NGGKVRVVSSSVSAKKDPASFLPSNLQGHDSDHFDGGTTQPFSSFRTLFDSAVVRGSSFLSSITNISTSNHNGDSPPTTTTTTSSSSSSS 748
MFAPPLHV+YKVYGK AESHPDLDDR LQVAMEDR Q + QR+RR R+ + GVE A G E+ A ++FSPA+EGWLIK+GSGGLR+WRRRWVGLANR+LWYANGPA PGG GGG+C PEKGSIGCMELTQWS+V E ADGL FRV+ G PED R + E HS E + + G P LD V + A + E P Q + + S S S GHV GWWFRAESLQEK VWM KIR+SI+LA WWS LRFGPSLGEGGFSQV+EM D R GERLAVKVM RRRMERDQALAETDILALV +R++HPHLMAPRR+YVEG RVWIMFPLC GGDL QRL+ +GRG E EAA ++ RLLSAVQALHQHG+LHLDIKPENVLF +E+D S++LLTDFGLSR++ R G R + AG G + ++ E+E+ QD DY SRLRYN+AFDERVNGT+GYMAPEV+LHKRYTP+ADVW LGVVLHI LVGYAPFQ +Q R GS SSHQDALERSVRGEFVMDELDWAR+SPAA DLTRRMLT+DE+ RI++A+ALRH W+Q G++ V + VSS A S PS+ Q + D + Q SSFR +F+ + RGSSFLSSIT+ T SPPT+++++SSSSSSS
Sbjct: 1 MFAPPLHVTYKVYGKSAESHPDLDDRSLQVAMEDRLAQHRLQRQRRRRRLRGTLEKSRGRSEEVGVEARACSGTGLNLEDQA------YIFSPAREGWLIKRGSGGLRMWRRRWVGLANRKLWYANGPAGPGG-GGGNCVAGSPEKGSIGCMELTQWSQVEEVASADGLVFRVVFGSPEDTEADNRTGGQAE---THSVSPEAESRPFAAAGRPPSFLDPVEELASNRREDSSTTEWPGQPSHPGLLEALALDSEGSGSVSRQGHVSQGGWWFRAESLQEKLVWMAKIRESISLAAWWSGLRFGPSLGEGGFSQVLEMQDTRTGERLAVKVMQARRRMERDQALAETDILALVGRRVRHPHLMAPRRVYVEGDRVWIMFPLCTGGDLFQRLLRKGRGPEGEAASIMLRLLSAVQALHQHGILHLDIKPENVLFAREDDPSEILLTDFGLSRRIHRAERQGARDQQ------------------PAGASRVGSNASDSSDDSEEEDESAV---------LGQDRDYFSRLRYNMAFDERVNGTVGYMAPEVVLHKRYTPAADVWCLGVVLHILLVGYAPFQDARQVR-----GSTERLHSSHQDALERSVRGEFVMDELDWARVSPAATDLTRRMLTLDESRRISVAEALRHAWLQEAL---GGIEKVAVRETRWDTVSSLACAIMQKPS-TPSDPQRKHARSLDRTSQQSSSSFRAMFNEVITRGSSFLSSITSTKT------SPPTSSSSSSSSSSSS 707
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G01690.1 ID=NO14G01690.1|Name=NO14G01690.1|organism=Nannochloropsis oceanica|type=mRNA|length=2292bp
ATGTTTGCCCCGCCGCTCCATGTAAGTTATAAGGTCTATGGAAAGGGTGC
TGAGTCACACCCGGACTTGGATGATCGATGCTTGCAAGTAGCCATGGAAG
ACCGCCACGTGCAGCAGCAACGACAGCGGGAGCGACGCCTTCGGCAGCGG
GACGCGGTCGCTATCCAGAAGGATAAGTCGTGCCGGACTCAAGGTGTGGA
AAAGGTTGCAGAGGACGGTGGCAGTAAGGAAGAGGAAGAGAACGCTAGGC
CTGAAGACGGGCTCTTTGTCTTTTCCCCTGCCCAGGAGGGTTGGCTGATC
AAGCAAGGCTCGGGTGGTCTCCGGATATGGCGGCGACGGTGGGTCGGTCT
TGCAAACCGTAGATTGTGGTATGCTAATGGACCGGCAGCGCCGGGGGGAA
GTGGCGGAGGCGACTGTCCGGAGAAGGGGTCGATTGGATGCATGGAATTG
ACGCAGTGGAGCCGGGTGGTGGAGGAGGACTGTGCCGATGGTCTATCCTT
CCGTGTGATTCCTGGCAAACCCGAAGACGCGTACCCTTCTGAAAGAGTCG
AGGTGGAGGAAGAGATCTGCGGGGCGCACAGCTCCGATGACGAGTTCGAT
GAGGGTGATTCAGGCGGTACACCCACACACTCATTAGACGGGGTCGCGGA
CGCTGCGCCCAGCACAGGGGAGAAGGAGCCCCTTATCTCACCGCATCAAT
TGACCCGCAAGCTTCACCAGCGGCGGTCAATTGTAGGCTCGGTTGTCTCA
TCCAGTAGCCAGGGGCATGGACACGTGCCAACGGAAGGGTGGTGGTTTCG
AGCAGAGAGCTTGCAAGAGAAGGAGGTATGGATGACCAAGATAAGGAAGA
GTATCGCCTTGGCCGAGTGGTGGTCGGCATTACGCTTCGGGCCCTCCTTG
GGTGAGGGCGGGTTTTCCCAGGTGGTGGAGATGCTGGACATGCGCAATGG
CGAGCGGTTGGCAGTTAAGGTCATGCATGTCCGCCGACGGATGGAGCGGG
ACCAGGCCTTGGCTGAAACGGATATTTTGGCCTTGGTTAGGAAGCGGATT
CAACACCCGCACCTGATGGCGCCTCGGCGCATTTACGTAGAGGGTTGCCG
AGTCTGGATCATGTTCCCCCTGTGTCGTGGGGGCGACCTGCTCCAGCGCC
TGGTCAGCAGGGGCCGTGGGTCGGAAGCCGAAGCCGCCGTGGTAGTATCT
CGACTGTTGTCGGCGGTGCAGGCTCTTCACCAGCATGGTGTGCTTCACTT
GGACATCAAGCCTGAGAACGTGCTGTTCGTCAAGGAAGAGGACCTGTCAC
AGGTTCTTCTCACGGATTTTGGCCTGTCGCGCAAGATGCAGCCGACGAAT
CGGCTCGGGATGCGGAGCAGCCGATATGGGAAAGGCATAATCAAGAAGTT
GGAGGTGAGGGCTGCAGTAAGCGAGTGTGTTGCAGGAAAAGAGGGGTGGG
GCGGTGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGAGGGAGGAGGAGACA
GAAGAGGGGGATGATAATGAGGAGAAGGAGGACGCCGAGCAGGACTGGGA
CTACTTGTCGCGCCTGCGATATAATTTGGCATTCGACGAGCGCGTGAATG
GCACCATTGGCTACATGGCGCCCGAGGTGATTTTGCACAAGCGCTACACG
CCGTCAGCTGACGTCTGGAGTCTGGGGGTGGTGCTTCATATATGTTTGGT
CGGCTACGCGCCCTTTCAACACCAGCAGCAGGAGCGCCAGCAGGAGGTGG
GTGGAAGTTGCAGCAGTCACCAGGACGCTCTAGAACGCTCGGTACGGGGA
GAGTTTGTCATGGACGAGCTGGATTGGGCACGGATCTCACCTGCAGCGAA
AGACTTGACACGGCGCATGCTGACAGTCGACGAGACCGCGCGCATCACCA
TTGCGGACGCATTGCGCCATCCTTGGGTGCAGCACTGCACCAAGAAAGGG
GAAGGAGTCGACACGGTAGGAAATGGAGGGAAAGTGCGCGTCGTTTCCTC
GTCTGTGTCAGCCAAGAAGGACCCAGCTAGTTTTCTGCCCTCCAATCTTC
AGGGCCACGACAGCGACCACTTCGATGGCGGGACAACCCAGCCTTTCTCT
TCTTTCCGCACCCTCTTTGATAGTGCTGTTGTCCGCGGCTCCTCTTTTCT
CTCCTCGATAACCAACATCTCGACATCCAACCACAATGGTGACTCGCCTC
CTACCACCACCACCACCACCTCCTCCTCCTCGTCCTCCTCATCCTCCTCC
CTCCCCGTCTTGAGTGGGGGCTGGAAAGTCAATGATGTTTGA back to topprotein sequence of NO14G01690.1 >NO14G01690.1-protein ID=NO14G01690.1-protein|Name=NO14G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=764bp
MFAPPLHVSYKVYGKGAESHPDLDDRCLQVAMEDRHVQQQRQRERRLRQR
DAVAIQKDKSCRTQGVEKVAEDGGSKEEEENARPEDGLFVFSPAQEGWLI
KQGSGGLRIWRRRWVGLANRRLWYANGPAAPGGSGGGDCPEKGSIGCMEL
TQWSRVVEEDCADGLSFRVIPGKPEDAYPSERVEVEEEICGAHSSDDEFD
EGDSGGTPTHSLDGVADAAPSTGEKEPLISPHQLTRKLHQRRSIVGSVVS
SSSQGHGHVPTEGWWFRAESLQEKEVWMTKIRKSIALAEWWSALRFGPSL
GEGGFSQVVEMLDMRNGERLAVKVMHVRRRMERDQALAETDILALVRKRI
QHPHLMAPRRIYVEGCRVWIMFPLCRGGDLLQRLVSRGRGSEAEAAVVVS
RLLSAVQALHQHGVLHLDIKPENVLFVKEEDLSQVLLTDFGLSRKMQPTN
RLGMRSSRYGKGIIKKLEVRAAVSECVAGKEGWGGEEEEEEEEEGREEET
EEGDDNEEKEDAEQDWDYLSRLRYNLAFDERVNGTIGYMAPEVILHKRYT
PSADVWSLGVVLHICLVGYAPFQHQQQERQQEVGGSCSSHQDALERSVRG
EFVMDELDWARISPAAKDLTRRMLTVDETARITIADALRHPWVQHCTKKG
EGVDTVGNGGKVRVVSSSVSAKKDPASFLPSNLQGHDSDHFDGGTTQPFS
SFRTLFDSAVVRGSSFLSSITNISTSNHNGDSPPTTTTTTSSSSSSSSSS
LPVLSGGWKVNDV* back to topmRNA from alignment at chr14:522158..524449+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G01690.1 ID=NO14G01690.1|Name=NO14G01690.1|organism=Nannochloropsis oceanica|type=mRNA|length=2292bp|location=Sequence derived from alignment at chr14:522158..524449+ (Nannochloropsis oceanica)
ATGTTTGCCCCGCCGCTCCATGTAAGTTATAAGGTCTATGGAAAGGGTGC
TGAGTCACACCCGGACTTGGATGATCGATGCTTGCAAGTAGCCATGGAAG
ACCGCCACGTGCAGCAGCAACGACAGCGGGAGCGACGCCTTCGGCAGCGG
GACGCGGTCGCTATCCAGAAGGATAAGTCGTGCCGGACTCAAGGTGTGGA
AAAGGTTGCAGAGGACGGTGGCAGTAAGGAAGAGGAAGAGAACGCTAGGC
CTGAAGACGGGCTCTTTGTCTTTTCCCCTGCCCAGGAGGGTTGGCTGATC
AAGCAAGGCTCGGGTGGTCTCCGGATATGGCGGCGACGGTGGGTCGGTCT
TGCAAACCGTAGATTGTGGTATGCTAATGGACCGGCAGCGCCGGGGGGAA
GTGGCGGAGGCGACTGTCCGGAGAAGGGGTCGATTGGATGCATGGAATTG
ACGCAGTGGAGCCGGGTGGTGGAGGAGGACTGTGCCGATGGTCTATCCTT
CCGTGTGATTCCTGGCAAACCCGAAGACGCGTACCCTTCTGAAAGAGTCG
AGGTGGAGGAAGAGATCTGCGGGGCGCACAGCTCCGATGACGAGTTCGAT
GAGGGTGATTCAGGCGGTACACCCACACACTCATTAGACGGGGTCGCGGA
CGCTGCGCCCAGCACAGGGGAGAAGGAGCCCCTTATCTCACCGCATCAAT
TGACCCGCAAGCTTCACCAGCGGCGGTCAATTGTAGGCTCGGTTGTCTCA
TCCAGTAGCCAGGGGCATGGACACGTGCCAACGGAAGGGTGGTGGTTTCG
AGCAGAGAGCTTGCAAGAGAAGGAGGTATGGATGACCAAGATAAGGAAGA
GTATCGCCTTGGCCGAGTGGTGGTCGGCATTACGCTTCGGGCCCTCCTTG
GGTGAGGGCGGGTTTTCCCAGGTGGTGGAGATGCTGGACATGCGCAATGG
CGAGCGGTTGGCAGTTAAGGTCATGCATGTCCGCCGACGGATGGAGCGGG
ACCAGGCCTTGGCTGAAACGGATATTTTGGCCTTGGTTAGGAAGCGGATT
CAACACCCGCACCTGATGGCGCCTCGGCGCATTTACGTAGAGGGTTGCCG
AGTCTGGATCATGTTCCCCCTGTGTCGTGGGGGCGACCTGCTCCAGCGCC
TGGTCAGCAGGGGCCGTGGGTCGGAAGCCGAAGCCGCCGTGGTAGTATCT
CGACTGTTGTCGGCGGTGCAGGCTCTTCACCAGCATGGTGTGCTTCACTT
GGACATCAAGCCTGAGAACGTGCTGTTCGTCAAGGAAGAGGACCTGTCAC
AGGTTCTTCTCACGGATTTTGGCCTGTCGCGCAAGATGCAGCCGACGAAT
CGGCTCGGGATGCGGAGCAGCCGATATGGGAAAGGCATAATCAAGAAGTT
GGAGGTGAGGGCTGCAGTAAGCGAGTGTGTTGCAGGAAAAGAGGGGTGGG
GCGGTGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGAGGGAGGAGGAGACA
GAAGAGGGGGATGATAATGAGGAGAAGGAGGACGCCGAGCAGGACTGGGA
CTACTTGTCGCGCCTGCGATATAATTTGGCATTCGACGAGCGCGTGAATG
GCACCATTGGCTACATGGCGCCCGAGGTGATTTTGCACAAGCGCTACACG
CCGTCAGCTGACGTCTGGAGTCTGGGGGTGGTGCTTCATATATGTTTGGT
CGGCTACGCGCCCTTTCAACACCAGCAGCAGGAGCGCCAGCAGGAGGTGG
GTGGAAGTTGCAGCAGTCACCAGGACGCTCTAGAACGCTCGGTACGGGGA
GAGTTTGTCATGGACGAGCTGGATTGGGCACGGATCTCACCTGCAGCGAA
AGACTTGACACGGCGCATGCTGACAGTCGACGAGACCGCGCGCATCACCA
TTGCGGACGCATTGCGCCATCCTTGGGTGCAGCACTGCACCAAGAAAGGG
GAAGGAGTCGACACGGTAGGAAATGGAGGGAAAGTGCGCGTCGTTTCCTC
GTCTGTGTCAGCCAAGAAGGACCCAGCTAGTTTTCTGCCCTCCAATCTTC
AGGGCCACGACAGCGACCACTTCGATGGCGGGACAACCCAGCCTTTCTCT
TCTTTCCGCACCCTCTTTGATAGTGCTGTTGTCCGCGGCTCCTCTTTTCT
CTCCTCGATAACCAACATCTCGACATCCAACCACAATGGTGACTCGCCTC
CTACCACCACCACCACCACCTCCTCCTCCTCGTCCTCCTCATCCTCCTCC
CTCCCCGTCTTGAGTGGGGGCTGGAAAGTCAATGATGTTTGA back to topCoding sequence (CDS) from alignment at chr14:522158..524449+ >NO14G01690.1 ID=NO14G01690.1|Name=NO14G01690.1|organism=Nannochloropsis oceanica|type=CDS|length=2292bp|location=Sequence derived from alignment at chr14:522158..524449+ (Nannochloropsis oceanica)
ATGTTTGCCCCGCCGCTCCATGTAAGTTATAAGGTCTATGGAAAGGGTGC
TGAGTCACACCCGGACTTGGATGATCGATGCTTGCAAGTAGCCATGGAAG
ACCGCCACGTGCAGCAGCAACGACAGCGGGAGCGACGCCTTCGGCAGCGG
GACGCGGTCGCTATCCAGAAGGATAAGTCGTGCCGGACTCAAGGTGTGGA
AAAGGTTGCAGAGGACGGTGGCAGTAAGGAAGAGGAAGAGAACGCTAGGC
CTGAAGACGGGCTCTTTGTCTTTTCCCCTGCCCAGGAGGGTTGGCTGATC
AAGCAAGGCTCGGGTGGTCTCCGGATATGGCGGCGACGGTGGGTCGGTCT
TGCAAACCGTAGATTGTGGTATGCTAATGGACCGGCAGCGCCGGGGGGAA
GTGGCGGAGGCGACTGTCCGGAGAAGGGGTCGATTGGATGCATGGAATTG
ACGCAGTGGAGCCGGGTGGTGGAGGAGGACTGTGCCGATGGTCTATCCTT
CCGTGTGATTCCTGGCAAACCCGAAGACGCGTACCCTTCTGAAAGAGTCG
AGGTGGAGGAAGAGATCTGCGGGGCGCACAGCTCCGATGACGAGTTCGAT
GAGGGTGATTCAGGCGGTACACCCACACACTCATTAGACGGGGTCGCGGA
CGCTGCGCCCAGCACAGGGGAGAAGGAGCCCCTTATCTCACCGCATCAAT
TGACCCGCAAGCTTCACCAGCGGCGGTCAATTGTAGGCTCGGTTGTCTCA
TCCAGTAGCCAGGGGCATGGACACGTGCCAACGGAAGGGTGGTGGTTTCG
AGCAGAGAGCTTGCAAGAGAAGGAGGTATGGATGACCAAGATAAGGAAGA
GTATCGCCTTGGCCGAGTGGTGGTCGGCATTACGCTTCGGGCCCTCCTTG
GGTGAGGGCGGGTTTTCCCAGGTGGTGGAGATGCTGGACATGCGCAATGG
CGAGCGGTTGGCAGTTAAGGTCATGCATGTCCGCCGACGGATGGAGCGGG
ACCAGGCCTTGGCTGAAACGGATATTTTGGCCTTGGTTAGGAAGCGGATT
CAACACCCGCACCTGATGGCGCCTCGGCGCATTTACGTAGAGGGTTGCCG
AGTCTGGATCATGTTCCCCCTGTGTCGTGGGGGCGACCTGCTCCAGCGCC
TGGTCAGCAGGGGCCGTGGGTCGGAAGCCGAAGCCGCCGTGGTAGTATCT
CGACTGTTGTCGGCGGTGCAGGCTCTTCACCAGCATGGTGTGCTTCACTT
GGACATCAAGCCTGAGAACGTGCTGTTCGTCAAGGAAGAGGACCTGTCAC
AGGTTCTTCTCACGGATTTTGGCCTGTCGCGCAAGATGCAGCCGACGAAT
CGGCTCGGGATGCGGAGCAGCCGATATGGGAAAGGCATAATCAAGAAGTT
GGAGGTGAGGGCTGCAGTAAGCGAGTGTGTTGCAGGAAAAGAGGGGTGGG
GCGGTGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGAGGGAGGAGGAGACA
GAAGAGGGGGATGATAATGAGGAGAAGGAGGACGCCGAGCAGGACTGGGA
CTACTTGTCGCGCCTGCGATATAATTTGGCATTCGACGAGCGCGTGAATG
GCACCATTGGCTACATGGCGCCCGAGGTGATTTTGCACAAGCGCTACACG
CCGTCAGCTGACGTCTGGAGTCTGGGGGTGGTGCTTCATATATGTTTGGT
CGGCTACGCGCCCTTTCAACACCAGCAGCAGGAGCGCCAGCAGGAGGTGG
GTGGAAGTTGCAGCAGTCACCAGGACGCTCTAGAACGCTCGGTACGGGGA
GAGTTTGTCATGGACGAGCTGGATTGGGCACGGATCTCACCTGCAGCGAA
AGACTTGACACGGCGCATGCTGACAGTCGACGAGACCGCGCGCATCACCA
TTGCGGACGCATTGCGCCATCCTTGGGTGCAGCACTGCACCAAGAAAGGG
GAAGGAGTCGACACGGTAGGAAATGGAGGGAAAGTGCGCGTCGTTTCCTC
GTCTGTGTCAGCCAAGAAGGACCCAGCTAGTTTTCTGCCCTCCAATCTTC
AGGGCCACGACAGCGACCACTTCGATGGCGGGACAACCCAGCCTTTCTCT
TCTTTCCGCACCCTCTTTGATAGTGCTGTTGTCCGCGGCTCCTCTTTTCT
CTCCTCGATAACCAACATCTCGACATCCAACCACAATGGTGACTCGCCTC
CTACCACCACCACCACCACCTCCTCCTCCTCGTCCTCCTCATCCTCCTCC
CTCCCCGTCTTGAGTGGGGGCTGGAAAGTCAATGATGTTTGA back to top
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