NO14G01380.1, NO14G01380.1 (mRNA) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO14G01380.1 vs.
Match: XP_005856226.1 (4-hydroxybenzoate hexaprenyltransferase [Nannochloropsis gaditana CCMP526]; EKU20135.1 4-hydroxybenzoate hexaprenyltransferase [Nannochloropsis gaditana CCMP526]; EWM24684.1 4-hydroxybenzoate polyprenyl transferase [Nannochloropsis gaditana]) HSP 1 Score: 486.9 bits (1252), Expect = 4.400e-134 Identity = 227/284 (79.93%), Postives = 255/284 (89.79%), Query Frame = 0 Query: 1 MQPYLRLARVDKPIGTYLLLWPGYWGLALAAAPGTLPDWGLLTAVGVGTVVMRSAGCTVNDLWDRDIDKNVERTKNRPITSGEISVTSGVVFLGAQLLAGLGVLVQLNEYSIYLGMASVPLVLTYPLMKRWTNYPQLFLGVTFNWGVLMGWAATHGSCDWPVILPLYTSAVAWTMVYDTLYAHQDKKDDARLGLHSTALTFGEDRTKPILAGFSAVMIGGLLVTGVQADLAWPFNVGTGLTACSLLWQLGTAELNNPVNLAARFESNKWVGGVVFGSIVAGRYF 285 +QPY+RLAR+DKPIGTYLLLWPG+W LALAAAPG LPDW LL A GVGT+VMRSAGCTVNDLWDRD+DKNV RTK+RPITSGEISV +GV FLG QLLAGLGVL QLNEY+IYLGMASVPLVL YPLMKRWT+YPQLFLG+TFNWG LMGWAATHGSCDWP++LPLY SAVAWT+VYDTLYAHQDK+DD+RLG+ STALTFG+ TKP+L G SA M+GGLL+ G++ADL+W F +GTGLTA L WQL TA+LN NL+ARFESNKWVGG+VFGSIVAGRYF Sbjct: 128 VQPYMRLARLDKPIGTYLLLWPGFWSLALAAAPGALPDWKLLAAFGVGTLVMRSAGCTVNDLWDRDLDKNVARTKHRPITSGEISVQNGVGFLGIQLLAGLGVLTQLNEYTIYLGMASVPLVLAYPLMKRWTDYPQLFLGITFNWGALMGWAATHGSCDWPIVLPLYASAVAWTVVYDTLYAHQDKRDDSRLGIRSTALTFGDSGTKPVLTGLSAAMVGGLLLVGIEADLSWHFYLGTGLTASHLAWQLITADLNCSSNLSARFESNKWVGGLVFGSIVAGRYF 411 The following BLAST results are available for this feature:
BLAST of NO14G01380.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1) Total hits: 1
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G01380.1 ID=NO14G01380.1|Name=NO14G01380.1|organism=Nannochloropsis oceanica|type=mRNA|length=858bpback to top protein sequence of NO14G01380.1 >NO14G01380.1-protein ID=NO14G01380.1-protein|Name=NO14G01380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=286bpback to top mRNA from alignment at chr14:443128..443985+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>NO14G01380.1 ID=NO14G01380.1|Name=NO14G01380.1|organism=Nannochloropsis oceanica|type=mRNA|length=858bp|location=Sequence derived from alignment at chr14:443128..443985+ (Nannochloropsis oceanica)back to top Coding sequence (CDS) from alignment at chr14:443128..443985+ >NO14G01380.1 ID=NO14G01380.1|Name=NO14G01380.1|organism=Nannochloropsis oceanica|type=CDS|length=858bp|location=Sequence derived from alignment at chr14:443128..443985+ (Nannochloropsis oceanica)back to top Synonyms
Publications
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