NO14G01330.1, NO14G01330.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G01330.1
Unique NameNO14G01330.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4529
Alignment locationchr14:427737..432265 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:427737..432265 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO14G01330.1 vs.
Match: EWM24675.1 (hypothetical protein Naga_100123g9 [Nannochloropsis gaditana])

HSP 1 Score: 1258.8 bits (3256), Expect = 0.000e+0
Identity = 743/1408 (52.77%), Postives = 927/1408 (65.84%), Query Frame = 0
Query:   64 MTRNIEYW---GGGGFSARLEDEDDDEDDEIYTVAKERGVAGGAWIGSRPQGASLSDLDAKGTVLGQMLRAESITTDYLAMMLGGELVNCQVDRPKLVESKFMRFVTKLASSAPTKGREKRQIVVEVSPEF---RGASGAVGEFVEVGRTDMSYDDPNSTFALPVRVVCRQEMDCIVRVSVVCSQSNMGVGGEVALLGRHITRFSELWRATADVKPVIFAMTSPACPKGSRAMLWRLPFDDLRSPRSPYVGLASHRQHISYSVPYLFRRQETTRATATGKKHLQHHQHPQALGSSGDDNERTG-EDLLLARETALESRFPYHLAALIFRPLVERMEEAVAGWKQRYEHERLAQGFFASDAEALKHGRLLVRLSVVEAKDLPLLKGDEPATDYAGLGGGAKGGKDRVKLPNVSQRAQKLAAMGGNRAVQDKIKSLPCHPFVAISLEKPFPRVGQLIGHTNTEYGTRSPLFGSLVNSKLCPHSGRPREMFSAYGAARLYPQPYPQPSSQAPAFLFYVHGKEEVNKASLCFEVFQEGGREGG-AVLSASAVLLLDGRYQKVGSMEESPQTSEDAEVWLPLLDKEGNPAGRLLVRVAIFASAGAADTAAAPPVMDDFD--FGVGETVQDPCVVQP--------PFETIQRACYEWMKQAGFSGRPPREGDFFSVPSSSGTSTYNTSTTSSINSTSDKIQLSYPLEWIQRHITSLAQELAVLQTSLRLWEEAANDGRGFRSSEHKMTKELQGVPTNVHSQTFSVTNMCSFTGSRFSPIPAPCSSSSISSSSCSSSPSSSSTSAGSSIVQELLSN-IPITAPSQSPSPSFSPKIFYYDVVSTGAPTAHALGFRGGGLLTHDLQLASLQKDILGLDQSLFLPLKRQNQPF-PSLSILPTGPTGLLSNDLLRKLLKFEAMSSKIAVRRALVLSQALGIATTSLATKLDIMLTEDANPSLIIRTAENMTKVGFLVCFQGLISTIGKERGMLEDVAVAMEMASLFSFEIRPKSAASPSCSSSSLQSPQAHSPAPAPTPLDHNTQDLLLDFGIPSSSPFPHPSPPPSSPSIIPLATRGP---APTEPVD----GSKASL------LALDIEFDEAQRRVRLFLDPVAYERLPGILRQHGCQQQQSAGEA--AGGLVVPLVAVLFTQGIDAKQSLANFSNQLKKDQDMEDNDDD---TLSSSRTKAATKRVRGESTIQQQINRRSTRILNDYCHRCYPCVVPPPRVYRPFDRFVAERLDVAKKSLVHGSTEDFIRSVDKILVHPLCEGLKKALKRDNGMHKNVDLLREQERVTLEVGGGQVIFCKSGKDRTGMAVTLYQARLLAEKHGCGEVGSGGVERLVRDANVMRLHGTRLLLCDKNTGRFKFAFNNLQLQFMPALYKPPTETVEHLFDSIMNRDTT 1434
            MT   + W   G G  +A   DEDD+ED             G   +    +G +L DL+AKG +  ++  A+        M LGG+L+NC VDR KL  +K MRFVTK+AS+APTKGREKRQ+++ +S E    + A+G   + VE+GRTD SYDDP+S FA+PVRV CR++M C VRV V C+QSN+GVGGE ALLG++I +FS++W AT+   P++F MTSPACP+GSRA+LWRLPF  L  P SP++ L + R+H+SYSVPYLF R E       G +  ++H  P A   +  D E     +L++ARET LESRFPY LA LI RP +ERME AV GW+ R EHER+ QGFF+S AEALK G++LVRL+VV A+DLPL     P TDY GL      G D V+LPN+SQR QKL A+ GN+  Q +   + CHPFVA++LEKP P+VG LIGHTNTEY TR P FG+  N +LCPH+GRPRE FS +GAAR+ P P    S QAPAFLFY H  ++  + +L  EVFQE  R    A  +AS  L L+  +++    +++    EDAEV L L DK G PAGRLLVR+AIFA+ G    AAA           GV E+   P   +         P E  + ACY WM  AGFSG  PR+GDF +         +     +S   TS  ++L YP++WI+ HI SL Q+L+VLQ SL LW+ A +DGRGFRSSEHKMTK+LQGVPTNVHSQTF V ++   T           SSS++     S+SPS S   A   +   L ++ +P TAP+    P   P  FYYDVVS GAPTAHALG+R GGLL+H L++  LQKDI  LDQSL        +PF PSL   PTG TGLL ++LL KLL+FEA+++K A+RR LVLSQALGIATTS+ATKLDIML EDA+ +L  RTAENM + GFL+CFQGLISTIGKE GMLEDVA+A+EMAS FSFEI PK   S   + +  Q P   + +P P P  H  QD+L+D  IPS      PS P  + +  P  +R P    P  P      G+ AS        A+D+EFD ++R +RL L   AYERLP  L + G +Q   +G+     G+VVP+VA LFTQGIDAKQSLAN SNQLKK+   +   +     + ++ +KAA+ +V G+STIQ  INRRS RILNDYCHRC+P  V PP  Y  FDR + ER+DV + SLV    EDF RS+  I VHPLCEGL +AL R+NGMHKNVDLLREQER+ LEVGGGQVIFCKSGKDRTGMA+TL+QARLLA +HGC  +G+ G   L+R+AN+MR+HGTRLL+CDKN GR KFAFN LQLQFMP LYKPP ETVEHL  SI+NRD T
Sbjct:    1 MTETSDSWEDDGWGACAANKIDEDDEEDT----------AEGLGQVEPSIRGTALIDLNAKGRIFSKVWNADHSENGLRVMFLGGKLINCTVDRHKLAGNKVMRFVTKIASNAPTKGREKRQMIIAISTESVAEKVATGRDDDLVEIGRTDKSYDDPDSIFAIPVRVACRKDMSCTVRVQVTCAQSNLGVGGEAALLGQYIAKFSDIWNATSGGTPLVFPMTSPACPRGSRAILWRLPFSSLCPPCSPFIELKA-RRHLSYSVPYLFWRPERGECPGVGAQKARYHLRPHAREYAESDLEGPEFVNLVMARETTLESRFPYLLATLICRPFLERMERAVEGWRLRLEHERIRQGFFSSHAEALKSGQMLVRLTVVAAEDLPLSSEGSPETDYGGLKVQPLKG-DGVRLPNMSQRTQKLVALRGNKRTQAEDSPVRCHPFVAVTLEKPPPQVGLLIGHTNTEYATRHPAFGTNTNKRLCPHNGRPRESFSPHGAARIQPPPPSSASVQAPAFLFYTHA-DDPERGALRLEVFQESDRSPSCASFTASTRLSLESNFRRA---DKALPIEEDAEVRLLLSDKAGRPAGRLLVRMAIFAAGGTNTMAAATSKSTGTQKALGVFESPLKPRTGETSGFSAQISPLEAAEEACYSWMWHAGFSGLAPRKGDFLT--------QFAEQKAASAGGTS-VVRLRYPVDWIEGHIASLTQDLSVLQDSLLLWQRAVDDGRGFRSSEHKMTKDLQGVPTNVHSQTFVVADLNPQTHGS-------SSSSAVGCVPFSTSPSLSRDPALQDLFPSLSTHDVPHTAPAPQAVP---PTRFYYDVVSAGAPTAHALGYRRGGLLSHHLEMDILQKDIDALDQSL--------KPFYPSLQ--PTGETGLLCDELLLKLLRFEALAAKTAMRRILVLSQALGIATTSIATKLDIMLAEDADLTLSARTAENMCRAGFLICFQGLISTIGKEHGMLEDVAMAVEMASTFSFEICPKPRCSLPPTGARPQPPGPTNASPPPRPSPHENQDVLIDLDIPS-----FPSSPTLACTAYPSVSRTPMEDLPQSPKSFRDGGTTASQSGRTPPAAMDVEFDHSRRHIRLLLHKDAYERLPSCLGRVGREQTNQSGQQHHQSGVVVPIVATLFTQGIDAKQSLANLSNQLKKEAKEDTTAEQGGARIKNTSSKAASAKVGGDSTIQPLINRRSARILNDYCHRCHP--VLPPGKYNLFDR-LTERIDVGRSSLVFDPAEDFARSLSDISVHPLCEGLMEALTRENGMHKNVDLLREQERMVLEVGGGQVIFCKSGKDRTGMAITLFQARLLA-RHGCEGLGTDG---LIRNANIMRIHGTRLLICDKNVGRLKFAFNGLQLQFMPLLYKPPLETVEHLIVSIINRDIT 1351          
The following BLAST results are available for this feature:
BLAST of NO14G01330.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM24675.10.000e+052.77hypothetical protein Naga_100123g9 [Nannochloropsi... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01330NO14G01330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G01330.1NO14G01330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G01330.1.cds1NO14G01330.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G01330.1 ID=NO14G01330.1|Name=NO14G01330.1|organism=Nannochloropsis oceanica|type=mRNA|length=4529bp
ATGAATGAAATGCCTCGCCACCTCTCACACTCCACAGGCGTTGGCTCACG
CGGCTCGTCTCCGTGCAGCAGCAGTATCAGCACCAGCGGCAGCAGCAGGA
GCAGACCGTCTCCTTTCGTTATCGGGGCTCCCGTCATCCAGTCTGCAGCA
GAGAATAAGCGCGCACGTACACGACCACAAGCCCATTCCATGACGAGAAA
CATTGAGTACTGGGGGGGGGGTGGATTCAGTGCTCGTCTGGAGGACGAGG
ATGATGACGAAGACGATGAGATATACACGGTGGCAAAAGAGAGAGGTGTA
GCAGGAGGCGCTTGGATTGGCAGCCGCCCGCAAGGCGCAAGCTTGTCGGA
CTTGGACGCCAAGGGCACGGTGCTTGGGCAAATGCTGAGGGCTGAGAGTA
TCACTACCGATTATCTTGCCATGATGCTAGGCGGGGAGCTTGTCAATTGT
CAAGTGGATCGACCAAAGCTGGTGGAGAGTAAATTTATGCGTTTCGTGAC
GAAGCTTGCTAGCAGCGCCCCAACCAAGGGCCGAGAGAAGAGGCAGATAG
TAGTGGAGGTTTCACCTGAGTTTCGAGGCGCTAGTGGAGCGGTGGGAGAA
TTTGTGGAGGTCGGGCGGACGGACATGTCTTATGACGATCCTAACTCGAC
GTTTGCTTTGCCCGTCCGCGTAGTGTGCCGGCAAGAGATGGACTGCATTG
TGCGGGTGTCAGTCGTATGTTCCCAAAGCAATATGGGGGTGGGTGGAGAA
GTGGCATTGTTGGGGAGGCATATCACGAGGTTTTCGGAGCTCTGGCGAGC
GACTGCTGATGTGAAGCCTGTGATCTTTGCCATGACATCCCCCGCTTGTC
CCAAGGGGAGCAGGGCCATGTTGTGGCGTTTGCCCTTTGATGACCTTCGG
TCACCTCGTTCTCCGTATGTGGGTTTGGCATCTCACCGACAACATATATC
CTACTCGGTGCCATACCTTTTTCGACGACAGGAGACTACCAGGGCGACGG
CGACTGGAAAGAAGCACCTCCAGCACCACCAGCATCCGCAAGCGCTGGGC
AGCAGCGGTGATGACAACGAGCGGACGGGAGAGGATTTGCTTTTGGCCAG
GGAAACAGCATTGGAAAGTCGCTTTCCGTATCATCTGGCCGCTTTAATTT
TTCGTCCGTTGGTCGAGCGGATGGAGGAGGCAGTGGCCGGGTGGAAGCAG
CGATACGAGCATGAGCGGCTGGCGCAGGGCTTTTTTGCCTCAGACGCCGA
AGCTCTCAAGCATGGACGATTATTGGTCCGTCTCTCAGTGGTGGAGGCTA
AAGATTTGCCTTTGTTGAAGGGAGATGAACCTGCCACTGACTATGCTGGC
TTAGGCGGTGGTGCGAAGGGCGGAAAGGATCGAGTAAAGCTTCCCAACGT
CTCCCAACGTGCCCAAAAGCTCGCTGCCATGGGAGGGAACAGAGCAGTGC
AAGACAAAATTAAATCCCTACCTTGCCACCCATTCGTGGCTATCAGTCTT
GAAAAACCCTTTCCGAGAGTGGGGCAGTTGATCGGACATACCAATACAGA
GTATGGCACGCGGTCTCCTCTCTTTGGTAGCCTCGTCAACTCGAAACTCT
GTCCTCATAGCGGGCGTCCCCGAGAGATGTTTTCTGCATATGGTGCTGCT
CGTCTTTATCCTCAACCGTATCCTCAACCATCTTCACAAGCGCCGGCGTT
TCTTTTTTATGTTCATGGAAAGGAGGAGGTGAACAAGGCGAGTTTGTGTT
TTGAGGTATTTCAGGAGGGAGGGAGGGAGGGAGGGGCAGTGTTGAGTGCC
TCGGCGGTGCTATTGCTCGATGGGCGGTACCAGAAGGTAGGGTCAATGGA
AGAGAGTCCGCAGACTTCGGAGGATGCAGAGGTTTGGTTGCCGTTGCTCG
ACAAGGAGGGAAACCCCGCCGGGAGGCTTTTGGTCCGAGTCGCCATTTTT
GCTAGCGCTGGAGCAGCAGACACAGCAGCAGCACCACCGGTGATGGATGA
TTTTGACTTCGGCGTTGGCGAAACAGTACAGGATCCTTGTGTGGTGCAGC
CTCCTTTTGAGACGATCCAACGGGCATGCTACGAGTGGATGAAGCAAGCG
GGCTTCTCTGGCCGCCCTCCTCGGGAAGGCGACTTCTTCTCTGTCCCTTC
CTCTTCCGGCACCAGCACGTACAATACCAGCACCACCAGCAGTATCAACA
GCACCAGCGACAAGATACAGCTCTCGTACCCCCTAGAGTGGATTCAGCGT
CACATCACTTCGCTTGCTCAAGAGCTAGCGGTGCTACAGACCTCCCTACG
CCTCTGGGAGGAAGCAGCCAATGACGGAAGAGGCTTCCGCAGCTCAGAGC
ACAAAATGACCAAGGAGCTACAGGGCGTCCCTACCAACGTCCATTCCCAG
ACATTTTCAGTCACTAACATGTGCTCTTTTACAGGGTCTCGCTTCTCCCC
TATTCCCGCTCCTTGTTCCTCCTCCTCTATCTCCTCCTCCTCCTGTTCCT
CCTCCCCCTCCTCCTCCTCCACCTCTGCTGGGTCCAGCATCGTCCAAGAG
TTGCTTTCAAATATCCCTATCACCGCCCCTTCACAGTCTCCTTCCCCCTC
CTTTTCTCCCAAAATTTTTTATTACGACGTCGTCTCGACCGGCGCCCCAA
CCGCCCACGCTCTCGGCTTCCGAGGTGGTGGCCTCCTCACCCACGACCTT
CAACTAGCCTCCCTCCAGAAAGACATCCTCGGTCTCGATCAATCCCTTTT
CCTCCCCCTCAAGCGGCAAAACCAGCCCTTTCCTTCCCTCTCCATCCTCC
CCACCGGGCCCACAGGCTTACTAAGCAACGACCTACTACGTAAACTTCTA
AAATTTGAAGCCATGTCAAGCAAAATCGCCGTCCGTCGCGCCCTTGTACT
CTCTCAAGCCCTTGGAATCGCCACAACTTCCCTCGCGACAAAGCTGGACA
TCATGCTCACTGAAGATGCCAATCCCTCCCTCATCATCCGCACCGCGGAA
AACATGACCAAAGTCGGGTTTTTGGTGTGCTTCCAAGGGCTAATATCAAC
GATTGGCAAAGAGCGTGGGATGCTTGAAGACGTAGCCGTGGCCATGGAGA
TGGCGTCCCTTTTCTCCTTCGAGATCCGTCCCAAATCAGCCGCGTCCCCC
TCCTGCTCCTCTTCGTCCTTGCAGTCACCACAAGCCCACAGCCCCGCCCC
TGCTCCAACGCCCCTCGATCATAACACCCAGGACCTGCTCTTGGACTTTG
GCATACCTTCTTCCTCTCCCTTCCCCCACCCTTCTCCTCCCCCTTCCTCT
CCTTCCATTATTCCATTGGCAACTAGAGGTCCTGCACCGACAGAGCCTGT
GGATGGCAGCAAAGCCTCCCTTCTTGCATTGGACATTGAGTTTGACGAAG
CACAAAGACGTGTCCGCCTCTTTTTGGATCCCGTGGCATATGAACGTCTT
CCCGGTATCTTGCGCCAGCATGGCTGTCAGCAGCAGCAATCAGCGGGAGA
AGCCGCAGGTGGATTGGTGGTGCCTTTAGTGGCAGTGCTCTTTACCCAGG
GCATCGATGCCAAGCAGTCCCTCGCCAATTTCTCTAACCAACTTAAAAAG
GACCAAGACATGGAAGACAACGACGATGACACCCTCTCCAGCAGCAGAAC
CAAAGCGGCCACCAAAAGAGTGCGAGGAGAATCGACGATTCAACAACAGA
TTAATCGACGATCGACAAGGATCTTGAATGATTACTGCCATCGTTGCTAT
CCTTGTGTGGTGCCTCCTCCGAGGGTGTACCGTCCGTTTGACCGCTTTGT
GGCAGAGAGGCTGGACGTGGCGAAAAAATCACTAGTACATGGTTCGACCG
AGGATTTTATCAGATCAGTGGACAAGATTCTCGTGCATCCGCTTTGTGAG
GGGTTGAAAAAAGCGTTGAAACGCGATAACGGTATGCATAAAAACGTGGA
TTTATTGAGGGAGCAAGAGCGGGTGACTTTAGAAGTTGGGGGTGGGCAGG
TGATCTTTTGCAAATCCGGCAAGGACCGGACGGGCATGGCGGTAACCCTG
TATCAAGCGAGATTGCTGGCTGAGAAACATGGGTGCGGAGAGGTGGGGAG
TGGGGGCGTGGAGAGGTTGGTGCGGGATGCGAATGTGATGCGTTTGCATG
GAACGCGGTTATTGCTCTGTGACAAGAACACGGGGCGTTTCAAGTTTGCT
TTCAATAATTTGCAGCTTCAATTTATGCCGGCATTGTACAAGCCCCCGAC
GGAGACAGTGGAGCATTTATTTGATTCGATCATGAACAGGGATACGACTT
AGGTAATTGGTTTGGTGCAAGGGGGGAAAGCTTTGTTGATATCGGCGCGG
TCAAATTGATGAATATAAACATGTAACTAAAGTTTAAGAGAGCTCTGTGC
GTTTGATACATGTGTGTAAGTGAAGTAGGTACTCCAGAATCAAAAGAAAT
AAAGCTACTTCTGGAGCCATGTTTGTTTCCAACATGTCCCGCCTTTTTGA
AATGCAAGAGAGCTCGTGTGATGAACACG
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protein sequence of NO14G01330.1

>NO14G01330.1-protein ID=NO14G01330.1-protein|Name=NO14G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1434bp
MNEMPRHLSHSTGVGSRGSSPCSSSISTSGSSRSRPSPFVIGAPVIQSAA
ENKRARTRPQAHSMTRNIEYWGGGGFSARLEDEDDDEDDEIYTVAKERGV
AGGAWIGSRPQGASLSDLDAKGTVLGQMLRAESITTDYLAMMLGGELVNC
QVDRPKLVESKFMRFVTKLASSAPTKGREKRQIVVEVSPEFRGASGAVGE
FVEVGRTDMSYDDPNSTFALPVRVVCRQEMDCIVRVSVVCSQSNMGVGGE
VALLGRHITRFSELWRATADVKPVIFAMTSPACPKGSRAMLWRLPFDDLR
SPRSPYVGLASHRQHISYSVPYLFRRQETTRATATGKKHLQHHQHPQALG
SSGDDNERTGEDLLLARETALESRFPYHLAALIFRPLVERMEEAVAGWKQ
RYEHERLAQGFFASDAEALKHGRLLVRLSVVEAKDLPLLKGDEPATDYAG
LGGGAKGGKDRVKLPNVSQRAQKLAAMGGNRAVQDKIKSLPCHPFVAISL
EKPFPRVGQLIGHTNTEYGTRSPLFGSLVNSKLCPHSGRPREMFSAYGAA
RLYPQPYPQPSSQAPAFLFYVHGKEEVNKASLCFEVFQEGGREGGAVLSA
SAVLLLDGRYQKVGSMEESPQTSEDAEVWLPLLDKEGNPAGRLLVRVAIF
ASAGAADTAAAPPVMDDFDFGVGETVQDPCVVQPPFETIQRACYEWMKQA
GFSGRPPREGDFFSVPSSSGTSTYNTSTTSSINSTSDKIQLSYPLEWIQR
HITSLAQELAVLQTSLRLWEEAANDGRGFRSSEHKMTKELQGVPTNVHSQ
TFSVTNMCSFTGSRFSPIPAPCSSSSISSSSCSSSPSSSSTSAGSSIVQE
LLSNIPITAPSQSPSPSFSPKIFYYDVVSTGAPTAHALGFRGGGLLTHDL
QLASLQKDILGLDQSLFLPLKRQNQPFPSLSILPTGPTGLLSNDLLRKLL
KFEAMSSKIAVRRALVLSQALGIATTSLATKLDIMLTEDANPSLIIRTAE
NMTKVGFLVCFQGLISTIGKERGMLEDVAVAMEMASLFSFEIRPKSAASP
SCSSSSLQSPQAHSPAPAPTPLDHNTQDLLLDFGIPSSSPFPHPSPPPSS
PSIIPLATRGPAPTEPVDGSKASLLALDIEFDEAQRRVRLFLDPVAYERL
PGILRQHGCQQQQSAGEAAGGLVVPLVAVLFTQGIDAKQSLANFSNQLKK
DQDMEDNDDDTLSSSRTKAATKRVRGESTIQQQINRRSTRILNDYCHRCY
PCVVPPPRVYRPFDRFVAERLDVAKKSLVHGSTEDFIRSVDKILVHPLCE
GLKKALKRDNGMHKNVDLLREQERVTLEVGGGQVIFCKSGKDRTGMAVTL
YQARLLAEKHGCGEVGSGGVERLVRDANVMRLHGTRLLLCDKNTGRFKFA
FNNLQLQFMPALYKPPTETVEHLFDSIMNRDTT*
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mRNA from alignment at chr14:427737..432265+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G01330.1 ID=NO14G01330.1|Name=NO14G01330.1|organism=Nannochloropsis oceanica|type=mRNA|length=4529bp|location=Sequence derived from alignment at chr14:427737..432265+ (Nannochloropsis oceanica)
ATGAATGAAATGCCTCGCCACCTCTCACACTCCACAGGCGTTGGCTCACG CGGCTCGTCTCCGTGCAGCAGCAGTATCAGCACCAGCGGCAGCAGCAGGA GCAGACCGTCTCCTTTCGTTATCGGGGCTCCCGTCATCCAGTCTGCAGCA GAGAATAAGCGCGCACGTACACGACCACAAGCCCATTCCATGACGAGAAA CATTGAGTACTGGGGGGGGGGTGGATTCAGTGCTCGTCTGGAGGACGAGG ATGATGACGAAGACGATGAGATATACACGGTGGCAAAAGAGAGAGGTGTA GCAGGAGGCGCTTGGATTGGCAGCCGCCCGCAAGGCGCAAGCTTGTCGGA CTTGGACGCCAAGGGCACGGTGCTTGGGCAAATGCTGAGGGCTGAGAGTA TCACTACCGATTATCTTGCCATGATGCTAGGCGGGGAGCTTGTCAATTGT CAAGTGGATCGACCAAAGCTGGTGGAGAGTAAATTTATGCGTTTCGTGAC GAAGCTTGCTAGCAGCGCCCCAACCAAGGGCCGAGAGAAGAGGCAGATAG TAGTGGAGGTTTCACCTGAGTTTCGAGGCGCTAGTGGAGCGGTGGGAGAA TTTGTGGAGGTCGGGCGGACGGACATGTCTTATGACGATCCTAACTCGAC GTTTGCTTTGCCCGTCCGCGTAGTGTGCCGGCAAGAGATGGACTGCATTG TGCGGGTGTCAGTCGTATGTTCCCAAAGCAATATGGGGGTGGGTGGAGAA GTGGCATTGTTGGGGAGGCATATCACGAGGTTTTCGGAGCTCTGGCGAGC GACTGCTGATGTGAAGCCTGTGATCTTTGCCATGACATCCCCCGCTTGTC CCAAGGGGAGCAGGGCCATGTTGTGGCGTTTGCCCTTTGATGACCTTCGG TCACCTCGTTCTCCGTATGTGGGTTTGGCATCTCACCGACAACATATATC CTACTCGGTGCCATACCTTTTTCGACGACAGGAGACTACCAGGGCGACGG CGACTGGAAAGAAGCACCTCCAGCACCACCAGCATCCGCAAGCGCTGGGC AGCAGCGGTGATGACAACGAGCGGACGGGAGAGGATTTGCTTTTGGCCAG GGAAACAGCATTGGAAAGTCGCTTTCCGTATCATCTGGCCGCTTTAATTT TTCGTCCGTTGGTCGAGCGGATGGAGGAGGCAGTGGCCGGGTGGAAGCAG CGATACGAGCATGAGCGGCTGGCGCAGGGCTTTTTTGCCTCAGACGCCGA AGCTCTCAAGCATGGACGATTATTGGTCCGTCTCTCAGTGGTGGAGGCTA AAGATTTGCCTTTGTTGAAGGGAGATGAACCTGCCACTGACTATGCTGGC TTAGGCGGTGGTGCGAAGGGCGGAAAGGATCGAGTAAAGCTTCCCAACGT CTCCCAACGTGCCCAAAAGCTCGCTGCCATGGGAGGGAACAGAGCAGTGC AAGACAAAATTAAATCCCTACCTTGCCACCCATTCGTGGCTATCAGTCTT GAAAAACCCTTTCCGAGAGTGGGGCAGTTGATCGGACATACCAATACAGA GTATGGCACGCGGTCTCCTCTCTTTGGTAGCCTCGTCAACTCGAAACTCT GTCCTCATAGCGGGCGTCCCCGAGAGATGTTTTCTGCATATGGTGCTGCT CGTCTTTATCCTCAACCGTATCCTCAACCATCTTCACAAGCGCCGGCGTT TCTTTTTTATGTTCATGGAAAGGAGGAGGTGAACAAGGCGAGTTTGTGTT TTGAGGTATTTCAGGAGGGAGGGAGGGAGGGAGGGGCAGTGTTGAGTGCC TCGGCGGTGCTATTGCTCGATGGGCGGTACCAGAAGGTAGGGTCAATGGA AGAGAGTCCGCAGACTTCGGAGGATGCAGAGGTTTGGTTGCCGTTGCTCG ACAAGGAGGGAAACCCCGCCGGGAGGCTTTTGGTCCGAGTCGCCATTTTT GCTAGCGCTGGAGCAGCAGACACAGCAGCAGCACCACCGGTGATGGATGA TTTTGACTTCGGCGTTGGCGAAACAGTACAGGATCCTTGTGTGGTGCAGC CTCCTTTTGAGACGATCCAACGGGCATGCTACGAGTGGATGAAGCAAGCG GGCTTCTCTGGCCGCCCTCCTCGGGAAGGCGACTTCTTCTCTGTCCCTTC CTCTTCCGGCACCAGCACGTACAATACCAGCACCACCAGCAGTATCAACA GCACCAGCGACAAGATACAGCTCTCGTACCCCCTAGAGTGGATTCAGCGT CACATCACTTCGCTTGCTCAAGAGCTAGCGGTGCTACAGACCTCCCTACG CCTCTGGGAGGAAGCAGCCAATGACGGAAGAGGCTTCCGCAGCTCAGAGC ACAAAATGACCAAGGAGCTACAGGGCGTCCCTACCAACGTCCATTCCCAG ACATTTTCAGTCACTAACATGTGCTCTTTTACAGGGTCTCGCTTCTCCCC TATTCCCGCTCCTTGTTCCTCCTCCTCTATCTCCTCCTCCTCCTGTTCCT CCTCCCCCTCCTCCTCCTCCACCTCTGCTGGGTCCAGCATCGTCCAAGAG TTGCTTTCAAATATCCCTATCACCGCCCCTTCACAGTCTCCTTCCCCCTC CTTTTCTCCCAAAATTTTTTATTACGACGTCGTCTCGACCGGCGCCCCAA CCGCCCACGCTCTCGGCTTCCGAGGTGGTGGCCTCCTCACCCACGACCTT CAACTAGCCTCCCTCCAGAAAGACATCCTCGGTCTCGATCAATCCCTTTT CCTCCCCCTCAAGCGGCAAAACCAGCCCTTTCCTTCCCTCTCCATCCTCC CCACCGGGCCCACAGGCTTACTAAGCAACGACCTACTACGTAAACTTCTA AAATTTGAAGCCATGTCAAGCAAAATCGCCGTCCGTCGCGCCCTTGTACT CTCTCAAGCCCTTGGAATCGCCACAACTTCCCTCGCGACAAAGCTGGACA TCATGCTCACTGAAGATGCCAATCCCTCCCTCATCATCCGCACCGCGGAA AACATGACCAAAGTCGGGTTTTTGGTGTGCTTCCAAGGGCTAATATCAAC GATTGGCAAAGAGCGTGGGATGCTTGAAGACGTAGCCGTGGCCATGGAGA TGGCGTCCCTTTTCTCCTTCGAGATCCGTCCCAAATCAGCCGCGTCCCCC TCCTGCTCCTCTTCGTCCTTGCAGTCACCACAAGCCCACAGCCCCGCCCC TGCTCCAACGCCCCTCGATCATAACACCCAGGACCTGCTCTTGGACTTTG GCATACCTTCTTCCTCTCCCTTCCCCCACCCTTCTCCTCCCCCTTCCTCT CCTTCCATTATTCCATTGGCAACTAGAGGTCCTGCACCGACAGAGCCTGT GGATGGCAGCAAAGCCTCCCTTCTTGCATTGGACATTGAGTTTGACGAAG CACAAAGACGTGTCCGCCTCTTTTTGGATCCCGTGGCATATGAACGTCTT CCCGGTATCTTGCGCCAGCATGGCTGTCAGCAGCAGCAATCAGCGGGAGA AGCCGCAGGTGGATTGGTGGTGCCTTTAGTGGCAGTGCTCTTTACCCAGG GCATCGATGCCAAGCAGTCCCTCGCCAATTTCTCTAACCAACTTAAAAAG GACCAAGACATGGAAGACAACGACGATGACACCCTCTCCAGCAGCAGAAC CAAAGCGGCCACCAAAAGAGTGCGAGGAGAATCGACGATTCAACAACAGA TTAATCGACGATCGACAAGGATCTTGAATGATTACTGCCATCGTTGCTAT CCTTGTGTGGTGCCTCCTCCGAGGGTGTACCGTCCGTTTGACCGCTTTGT GGCAGAGAGGCTGGACGTGGCGAAAAAATCACTAGTACATGGTTCGACCG AGGATTTTATCAGATCAGTGGACAAGATTCTCGTGCATCCGCTTTGTGAG GGGTTGAAAAAAGCGTTGAAACGCGATAACGGTATGCATAAAAACGTGGA TTTATTGAGGGAGCAAGAGCGGGTGACTTTAGAAGTTGGGGGTGGGCAGG TGATCTTTTGCAAATCCGGCAAGGACCGGACGGGCATGGCGGTAACCCTG TATCAAGCGAGATTGCTGGCTGAGAAACATGGGTGCGGAGAGGTGGGGAG TGGGGGCGTGGAGAGGTTGGTGCGGGATGCGAATGTGATGCGTTTGCATG GAACGCGGTTATTGCTCTGTGACAAGAACACGGGGCGTTTCAAGTTTGCT TTCAATAATTTGCAGCTTCAATTTATGCCGGCATTGTACAAGCCCCCGAC GGAGACAGTGGAGCATTTATTTGATTCGATCATGAACAGGGATACGACTT AGGTAATTGGTTTGGTGCAAGGGGGGAAAGCTTTGTTGATATCGGCGCGG TCAAATTGATGAATATAAACATGTAACTAAAGTTTAAGAGAGCTCTGTGC GTTTGATACATGTGTGTAAGTGAAGTAGGTACTCCAGAATCAAAAGAAAT AAAGCTACTTCTGGAGCCATGTTTGTTTCCAACATGTCCCGCCTTTTTGA AATGCAAGAGAGCTCGTGTGATGAACACG
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Coding sequence (CDS) from alignment at chr14:427737..432265+

>NO14G01330.1 ID=NO14G01330.1|Name=NO14G01330.1|organism=Nannochloropsis oceanica|type=CDS|length=4302bp|location=Sequence derived from alignment at chr14:427737..432265+ (Nannochloropsis oceanica)
ATGAATGAAATGCCTCGCCACCTCTCACACTCCACAGGCGTTGGCTCACG
CGGCTCGTCTCCGTGCAGCAGCAGTATCAGCACCAGCGGCAGCAGCAGGA
GCAGACCGTCTCCTTTCGTTATCGGGGCTCCCGTCATCCAGTCTGCAGCA
GAGAATAAGCGCGCACGTACACGACCACAAGCCCATTCCATGACGAGAAA
CATTGAGTACTGGGGGGGGGGTGGATTCAGTGCTCGTCTGGAGGACGAGG
ATGATGACGAAGACGATGAGATATACACGGTGGCAAAAGAGAGAGGTGTA
GCAGGAGGCGCTTGGATTGGCAGCCGCCCGCAAGGCGCAAGCTTGTCGGA
CTTGGACGCCAAGGGCACGGTGCTTGGGCAAATGCTGAGGGCTGAGAGTA
TCACTACCGATTATCTTGCCATGATGCTAGGCGGGGAGCTTGTCAATTGT
CAAGTGGATCGACCAAAGCTGGTGGAGAGTAAATTTATGCGTTTCGTGAC
GAAGCTTGCTAGCAGCGCCCCAACCAAGGGCCGAGAGAAGAGGCAGATAG
TAGTGGAGGTTTCACCTGAGTTTCGAGGCGCTAGTGGAGCGGTGGGAGAA
TTTGTGGAGGTCGGGCGGACGGACATGTCTTATGACGATCCTAACTCGAC
GTTTGCTTTGCCCGTCCGCGTAGTGTGCCGGCAAGAGATGGACTGCATTG
TGCGGGTGTCAGTCGTATGTTCCCAAAGCAATATGGGGGTGGGTGGAGAA
GTGGCATTGTTGGGGAGGCATATCACGAGGTTTTCGGAGCTCTGGCGAGC
GACTGCTGATGTGAAGCCTGTGATCTTTGCCATGACATCCCCCGCTTGTC
CCAAGGGGAGCAGGGCCATGTTGTGGCGTTTGCCCTTTGATGACCTTCGG
TCACCTCGTTCTCCGTATGTGGGTTTGGCATCTCACCGACAACATATATC
CTACTCGGTGCCATACCTTTTTCGACGACAGGAGACTACCAGGGCGACGG
CGACTGGAAAGAAGCACCTCCAGCACCACCAGCATCCGCAAGCGCTGGGC
AGCAGCGGTGATGACAACGAGCGGACGGGAGAGGATTTGCTTTTGGCCAG
GGAAACAGCATTGGAAAGTCGCTTTCCGTATCATCTGGCCGCTTTAATTT
TTCGTCCGTTGGTCGAGCGGATGGAGGAGGCAGTGGCCGGGTGGAAGCAG
CGATACGAGCATGAGCGGCTGGCGCAGGGCTTTTTTGCCTCAGACGCCGA
AGCTCTCAAGCATGGACGATTATTGGTCCGTCTCTCAGTGGTGGAGGCTA
AAGATTTGCCTTTGTTGAAGGGAGATGAACCTGCCACTGACTATGCTGGC
TTAGGCGGTGGTGCGAAGGGCGGAAAGGATCGAGTAAAGCTTCCCAACGT
CTCCCAACGTGCCCAAAAGCTCGCTGCCATGGGAGGGAACAGAGCAGTGC
AAGACAAAATTAAATCCCTACCTTGCCACCCATTCGTGGCTATCAGTCTT
GAAAAACCCTTTCCGAGAGTGGGGCAGTTGATCGGACATACCAATACAGA
GTATGGCACGCGGTCTCCTCTCTTTGGTAGCCTCGTCAACTCGAAACTCT
GTCCTCATAGCGGGCGTCCCCGAGAGATGTTTTCTGCATATGGTGCTGCT
CGTCTTTATCCTCAACCGTATCCTCAACCATCTTCACAAGCGCCGGCGTT
TCTTTTTTATGTTCATGGAAAGGAGGAGGTGAACAAGGCGAGTTTGTGTT
TTGAGGTATTTCAGGAGGGAGGGAGGGAGGGAGGGGCAGTGTTGAGTGCC
TCGGCGGTGCTATTGCTCGATGGGCGGTACCAGAAGGTAGGGTCAATGGA
AGAGAGTCCGCAGACTTCGGAGGATGCAGAGGTTTGGTTGCCGTTGCTCG
ACAAGGAGGGAAACCCCGCCGGGAGGCTTTTGGTCCGAGTCGCCATTTTT
GCTAGCGCTGGAGCAGCAGACACAGCAGCAGCACCACCGGTGATGGATGA
TTTTGACTTCGGCGTTGGCGAAACAGTACAGGATCCTTGTGTGGTGCAGC
CTCCTTTTGAGACGATCCAACGGGCATGCTACGAGTGGATGAAGCAAGCG
GGCTTCTCTGGCCGCCCTCCTCGGGAAGGCGACTTCTTCTCTGTCCCTTC
CTCTTCCGGCACCAGCACGTACAATACCAGCACCACCAGCAGTATCAACA
GCACCAGCGACAAGATACAGCTCTCGTACCCCCTAGAGTGGATTCAGCGT
CACATCACTTCGCTTGCTCAAGAGCTAGCGGTGCTACAGACCTCCCTACG
CCTCTGGGAGGAAGCAGCCAATGACGGAAGAGGCTTCCGCAGCTCAGAGC
ACAAAATGACCAAGGAGCTACAGGGCGTCCCTACCAACGTCCATTCCCAG
ACATTTTCAGTCACTAACATGTGCTCTTTTACAGGGTCTCGCTTCTCCCC
TATTCCCGCTCCTTGTTCCTCCTCCTCTATCTCCTCCTCCTCCTGTTCCT
CCTCCCCCTCCTCCTCCTCCACCTCTGCTGGGTCCAGCATCGTCCAAGAG
TTGCTTTCAAATATCCCTATCACCGCCCCTTCACAGTCTCCTTCCCCCTC
CTTTTCTCCCAAAATTTTTTATTACGACGTCGTCTCGACCGGCGCCCCAA
CCGCCCACGCTCTCGGCTTCCGAGGTGGTGGCCTCCTCACCCACGACCTT
CAACTAGCCTCCCTCCAGAAAGACATCCTCGGTCTCGATCAATCCCTTTT
CCTCCCCCTCAAGCGGCAAAACCAGCCCTTTCCTTCCCTCTCCATCCTCC
CCACCGGGCCCACAGGCTTACTAAGCAACGACCTACTACGTAAACTTCTA
AAATTTGAAGCCATGTCAAGCAAAATCGCCGTCCGTCGCGCCCTTGTACT
CTCTCAAGCCCTTGGAATCGCCACAACTTCCCTCGCGACAAAGCTGGACA
TCATGCTCACTGAAGATGCCAATCCCTCCCTCATCATCCGCACCGCGGAA
AACATGACCAAAGTCGGGTTTTTGGTGTGCTTCCAAGGGCTAATATCAAC
GATTGGCAAAGAGCGTGGGATGCTTGAAGACGTAGCCGTGGCCATGGAGA
TGGCGTCCCTTTTCTCCTTCGAGATCCGTCCCAAATCAGCCGCGTCCCCC
TCCTGCTCCTCTTCGTCCTTGCAGTCACCACAAGCCCACAGCCCCGCCCC
TGCTCCAACGCCCCTCGATCATAACACCCAGGACCTGCTCTTGGACTTTG
GCATACCTTCTTCCTCTCCCTTCCCCCACCCTTCTCCTCCCCCTTCCTCT
CCTTCCATTATTCCATTGGCAACTAGAGGTCCTGCACCGACAGAGCCTGT
GGATGGCAGCAAAGCCTCCCTTCTTGCATTGGACATTGAGTTTGACGAAG
CACAAAGACGTGTCCGCCTCTTTTTGGATCCCGTGGCATATGAACGTCTT
CCCGGTATCTTGCGCCAGCATGGCTGTCAGCAGCAGCAATCAGCGGGAGA
AGCCGCAGGTGGATTGGTGGTGCCTTTAGTGGCAGTGCTCTTTACCCAGG
GCATCGATGCCAAGCAGTCCCTCGCCAATTTCTCTAACCAACTTAAAAAG
GACCAAGACATGGAAGACAACGACGATGACACCCTCTCCAGCAGCAGAAC
CAAAGCGGCCACCAAAAGAGTGCGAGGAGAATCGACGATTCAACAACAGA
TTAATCGACGATCGACAAGGATCTTGAATGATTACTGCCATCGTTGCTAT
CCTTGTGTGGTGCCTCCTCCGAGGGTGTACCGTCCGTTTGACCGCTTTGT
GGCAGAGAGGCTGGACGTGGCGAAAAAATCACTAGTACATGGTTCGACCG
AGGATTTTATCAGATCAGTGGACAAGATTCTCGTGCATCCGCTTTGTGAG
GGGTTGAAAAAAGCGTTGAAACGCGATAACGGTATGCATAAAAACGTGGA
TTTATTGAGGGAGCAAGAGCGGGTGACTTTAGAAGTTGGGGGTGGGCAGG
TGATCTTTTGCAAATCCGGCAAGGACCGGACGGGCATGGCGGTAACCCTG
TATCAAGCGAGATTGCTGGCTGAGAAACATGGGTGCGGAGAGGTGGGGAG
TGGGGGCGTGGAGAGGTTGGTGCGGGATGCGAATGTGATGCGTTTGCATG
GAACGCGGTTATTGCTCTGTGACAAGAACACGGGGCGTTTCAAGTTTGCT
TTCAATAATTTGCAGCTTCAATTTATGCCGGCATTGTACAAGCCCCCGAC
GGAGACAGTGGAGCATTTATTTGATTCGATCATGAACAGGGATACGACTT
AG
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Synonyms
Publications