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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr14 | genome | chr14:363370..366145 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G01080.1 vs.
Match: XP_005854304.1 (cbl-interacting serine threonine-protein kinase 9 [Nannochloropsis gaditana CCMP526]; EKU22056.1 cbl-interacting serine threonine-protein kinase 9 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 499.6 bits (1285), Expect = 1.700e-137 Identity = 277/480 (57.71%), Postives = 327/480 (68.12%), Query Frame = 0
Query: 332 QRSQKQLYNDFVLLREKYDEAKTNIAEVLWGFLPSTTSCFPSIPPM-------------QEPRQHSCDPSLPPSFP-PSLLIESEQQVGPYALGSKLGEGQFAKVFSCRKRGEGGREGG-----EEYALKVINKEKVASIAALRRVDGEIGAQRTLRHKGILKVKDVINGRFGLYVVMEKGGKDLFDYFDERGDARLPAQDTVTLARAVLDAIHFCHSRGICHRDLKPENILLNT-------RGRAAREGRKEESDLL------EEKKKEE------EEEEEEEEEEGE------------------SLFQVKLCDFGLCSSFSPGQPLHEFCGSPGFFAPEMITHVLSDGEGGKIEGGRGYDGPKVDLWSIGCILLELSVGHEVFCEEWMVAYDYELLQEPREFERRIEGCLEGMGKTMREKLGLEEDLVDFIQGLLQLDPRRRRGVEECASHPWVALGNG---KSFLTGELKEEEWEG 753
Q+ QKQLYNDFVLLREKYDEAK NIAEVLWGFLPSTTS FPSIPPM +E RQH PS P P+ L+E+E QVGPY +G LGEGQFAKVF+C + G+ G+ GG +EYALKVINKEK++S+ ALRRVD EI AQRTL+H+GIL+V DVINGRFGLYVVMEKGGKDLFDY DERGDARLP D TLARAVL+AIH+CH+RG+CHRDLKPENILL T RG +G S L EE+ ++E EE +E+E+G+ SLF VKLCDFGLCSSF GQ L +FCGSPGFFAPEMIT + GYDGPK DLWS+GCILLELSVGH++FCEEWM AYDYELL +P FE ++ L+G+ +TMRE+L L+ ++DF+ GLL LDP RRG+EE +HPW +G +S G KE E +G
Sbjct: 273 QKCQKQLYNDFVLLREKYDEAKANIAEVLWGFLPSTTSSFPSIPPMHVSPEEHQQYLGYEEQRQHR-----QPSHPVPARLVETEAQVGPYRVGRLLGEGQFAKVFACTRGGKEGKHGGAEGRRKEYALKVINKEKISSLTALRRVDSEISAQRTLKHRGILQVLDVINGRFGLYVVMEKGGKDLFDYIDERGDARLPVPDCQTLARAVLNAIHYCHARGVCHRDLKPENILLKTAHDESEGRGEMKEQGGGRGSGLAQSPSGGEERSRQEQSPSGGEERSRQEQEQGQASSQGSQKAPSQDGHATHSLFDVKLCDFGLCSSFVRGQFLKDFCGSPGFFAPEMITQSM------------GYDGPKADLWSVGCILLELSVGHDIFCEEWMAAYDYELLHDPPAFEAKMRESLQGIERTMRERLDLDPIMIDFVLGLLVLDPAGRRGMEEIVTHPWDTEPSGSGLQSPARGAEKEGEAQG 735
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G01080.1 ID=NO14G01080.1|Name=NO14G01080.1|organism=Nannochloropsis oceanica|type=mRNA|length=2286bp
ATGGATGAAGGAAGAAGCGACAGTGACGCTTGTGGTAATATTAACCTGGT
CGGGGAGAAGAACGACTCCTTGGGACTGGCGTCCACACTCTCCCCCACCA
CCACACACGCTTCATTCAACTCCACAATCTCTTCTCTTGCCGCCTCTATC
TCCTTGAACACCACTGGGACAGTGCCAAAAGAGGAGAGGAAGGGACAAGG
GCAAAGCTTCTCCTCCACCATTGCCTCCTTTGTCGCCTCCACACATCTCA
ACACTAGTGACTCGGTCCTTCCGACCACCGATCGAAGCAGCAGAGCGAGT
ATCAGATTTAGCGTGGGAGGAGATGAGATTTTGGTGCCCCTACGCCATGG
GCCCCTTCCACGCGAAGAATTGATCAACCTCTTGTCCGTCGCCTTGAATC
CTACTCTACCCGTCATCCCACCAGAGGAGGTGGAAGAGGAGAATGAAGAC
GAGGAAGGAGATGCGGCGCTGGATCGCCCTCGTGGTGCAAGCAGCAAAAG
CAACAGCAGCAGTAGCGGAGAATGGGTTTTGCGTTGCCGCGTCATAAATA
ACGCGTTGTCTGCTCTTGATTCCCCCATCCCACATTGTCGTTCGTCTTCC
GGGCGCGATAATGCTGCTGCTGCTGCTGCTGCTGCAACGACTTTTTCTTC
CTCCTCTTCTTCCTGCGCTTCATGGGCCTCTCCATTCTCTTCATCCTTGC
GTGTTTCGGGGGAGGGGATGGGCGGGAGGGGGGGGAGAGGAGCAGGAGGG
CCACAGGGTTGGAGAAGGGAGTTGTCGGGTGCTGAGAAACAGAGCCGGAC
TGATTTCGACCTGGAAACGGAAACGGATTGTGCCTTGGGTGGGAAAGGAG
GGAGGAAGGGCGAAAAAGAGGACAAATATGAGCAGCTGCAGGTGGAGGTG
GGGACGTTGAGGGAGGAGAATGCGATGCTTCGGTACCGCCTAGCGGAGGT
GGAAGGACACCTGGGGAAGGCGACCGAGAACGTGAGGGCGCTACAGCGGT
CTCAAAAACAGCTTTACAACGATTTCGTCCTCCTCCGAGAAAAATATGAC
GAGGCCAAGACCAACATTGCTGAGGTCCTTTGGGGCTTTCTTCCCTCTAC
GACTTCCTGTTTCCCTTCCATCCCGCCCATGCAGGAGCCACGGCAGCACT
CCTGCGATCCCTCCCTCCCCCCCTCCTTCCCTCCCTCCCTCCTGATCGAA
AGCGAGCAGCAGGTGGGCCCATATGCCCTGGGTTCCAAGCTGGGCGAAGG
TCAATTTGCAAAGGTGTTTTCCTGTCGAAAGAGAGGCGAGGGAGGGAGGG
AAGGAGGCGAAGAGTATGCGCTGAAGGTGATCAATAAGGAGAAGGTGGCG
AGCATAGCGGCGTTGAGGAGGGTGGATGGTGAGATTGGGGCGCAGCGAAC
CCTGCGGCATAAGGGCATCTTAAAGGTGAAGGATGTCATCAATGGCCGCT
TTGGACTCTATGTGGTGATGGAGAAGGGAGGGAAGGACCTGTTCGACTAC
TTCGACGAACGAGGCGATGCTCGGCTCCCTGCACAGGACACAGTGACCCT
CGCCCGCGCCGTCTTAGACGCGATCCATTTCTGTCATTCCAGGGGCATTT
GCCACCGGGACTTAAAACCTGAAAATATTTTGTTGAACACCCGAGGGCGC
GCAGCAAGGGAGGGAAGGAAAGAGGAAAGTGACCTACTGGAGGAGAAGAA
GAAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGGGGAGTCGC
TGTTTCAGGTGAAATTGTGTGATTTTGGTTTGTGTTCCTCCTTCTCTCCC
GGTCAGCCGTTACACGAATTCTGCGGGTCGCCCGGATTTTTTGCTCCGGA
GATGATCACGCATGTCTTGAGTGATGGGGAGGGAGGGAAGATAGAGGGAG
GGAGAGGATACGATGGGCCGAAAGTTGATTTGTGGTCGATTGGTTGCATT
TTGCTGGAGCTGTCCGTAGGCCATGAGGTCTTCTGTGAGGAATGGATGGT
AGCGTATGATTATGAGCTGCTGCAGGAGCCGCGAGAGTTTGAGAGGAGGA
TAGAGGGGTGCTTGGAGGGGATGGGGAAGACAATGAGGGAGAAGCTGGGT
TTGGAAGAGGATTTGGTTGACTTTATTCAGGGACTGCTGCAGCTTGACCC
GAGGAGGAGGAGGGGTGTGGAAGAGTGTGCAAGCCATCCGTGGGTGGCTT
TGGGGAATGGAAAGAGTTTTTTGACGGGTGAGCTGAAGGAGGAGGAATGG
GAGGGAAGGGGGGGGGAAGAAGGAAAGGAGAGGTGA back to topprotein sequence of NO14G01080.1 >NO14G01080.1-protein ID=NO14G01080.1-protein|Name=NO14G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=762bp
MDEGRSDSDACGNINLVGEKNDSLGLASTLSPTTTHASFNSTISSLAASI
SLNTTGTVPKEERKGQGQSFSSTIASFVASTHLNTSDSVLPTTDRSSRAS
IRFSVGGDEILVPLRHGPLPREELINLLSVALNPTLPVIPPEEVEEENED
EEGDAALDRPRGASSKSNSSSSGEWVLRCRVINNALSALDSPIPHCRSSS
GRDNAAAAAAAATTFSSSSSSCASWASPFSSSLRVSGEGMGGRGGRGAGG
PQGWRRELSGAEKQSRTDFDLETETDCALGGKGGRKGEKEDKYEQLQVEV
GTLREENAMLRYRLAEVEGHLGKATENVRALQRSQKQLYNDFVLLREKYD
EAKTNIAEVLWGFLPSTTSCFPSIPPMQEPRQHSCDPSLPPSFPPSLLIE
SEQQVGPYALGSKLGEGQFAKVFSCRKRGEGGREGGEEYALKVINKEKVA
SIAALRRVDGEIGAQRTLRHKGILKVKDVINGRFGLYVVMEKGGKDLFDY
FDERGDARLPAQDTVTLARAVLDAIHFCHSRGICHRDLKPENILLNTRGR
AAREGRKEESDLLEEKKKEEEEEEEEEEEEGESLFQVKLCDFGLCSSFSP
GQPLHEFCGSPGFFAPEMITHVLSDGEGGKIEGGRGYDGPKVDLWSIGCI
LLELSVGHEVFCEEWMVAYDYELLQEPREFERRIEGCLEGMGKTMREKLG
LEEDLVDFIQGLLQLDPRRRRGVEECASHPWVALGNGKSFLTGELKEEEW
EGRGGEEGKER* back to topmRNA from alignment at chr14:363370..366145+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G01080.1 ID=NO14G01080.1|Name=NO14G01080.1|organism=Nannochloropsis oceanica|type=mRNA|length=2776bp|location=Sequence derived from alignment at chr14:363370..366145+ (Nannochloropsis oceanica)
ATGGATGAAGGAAGAAGCGACAGTGACGCTTGTGGTAATATTAACCTGGT
CGGGGAGAAGAACGACTCCTTGGGACTGGCGTCCACACTCTCCCCCACCA
CCACACACGCTTCATTCAACTCCACAATCTCTTCTCTTGCCGCCTCTATC
TCCTTGAACACCACTGGGACAGTGCCAAAAGAGGAGAGGAAGGGACAAGG
GCAAAGCTTCTCCTCCACCATTGCCTCCTTTGTCGCCTCCACACATCTCA
ACACTAGTGACTCGGTCCTTCCGACCACCGATCGAAGCAGCAGAGCGAGT
ATCAGATTTAGCGTGGGAGGAGATGAGATTTTGGTGCCCCTACGCCATGG
GCCCCTTCCACGCGAAGAATTGATCAACCTCTTGTCCGTCGCCTTGAATC
CTACTCTACCCGTCATCCCACCAGAGGAGGTGGAAGAGGAGAATGAAGAC
GAGGAAGGAGATGCGGCGCTGGATCGCCCTCGTGGTGCAAGCAGCAAAAG
CAACAGCAGCAGTAGCGGAGAATGGGTTTTGCGTTGCCGCGTCATAAATA
ACGCGTTGTCTGCTCTTGATTCCCCCATCCCACATTGTCGTTCGTCTTCC
GGGCGCGATAATGCTGCTGCTGCTGCTGCTGCTGCAACGACTTTTTCTTC
CTCCTCTTCTTCCTGCGCTTCATGGGCCTCTCCATTCTCTTCATCCTTGC
GTGTTTCGGGGGAGGGGATGGGCGGGAGGGGGGGGAGAGGAGCAGGAGGG
CCACAGGGTTGGAGAAGGGAGTTGTCGGGTGCTGAGAAACAGAGCCGGAC
TGATTTCGACCTGGAAACGGAAACGGATTGTGCCTTGGGTGGGAAAGGAG
GGAGGAAGGGCGAAAAAGAGGACAAATATGAGCAGCTGCAGGTGGAGGTG
GGGACGTTGAGGGAGGAGAATGCGATGCTTCGGTACCGCCTAGCGGAGGT
GGAAGGACACCTGGGGAAGGCGACCGAGAACGTGAGGGCGCTACAGCGGG
TGAGGAGCAAGGAAGAAGGGAGGGTGGAGAAAGGGAGGAGGTTTGGAAAA
TGATGCATGCTTGGACATTTGTTTTTTGGGGTTTGATCGTGTGTCAGTGT
TTGTGGGTTCTGGGTGTATATGTATATTTCATTCCCCCTCCCTCCCTCCC
TCCCTCCTTCCCTCCCTCCCTCTCCCTTTCCCCCCCTGCAGTCTCCTGAA
CAGCTCAACGATAAGAGTGGCTCTTTAACCGATGCATAACGAATTGACAA
TTAATATTGCTGAGGTCCGCCGCAGTTTACCAAACGTTATTCACTCACAC
CCCTCCCGCTCGCCTGTCCTCCCTCCCTTCTTCCCTTCCAGTCTCAAAAA
CAGCTTTACAACGATTTCGTCCTCCTCCGAGAAAAATATGACGAGGCCAA
GACCAACATTGCTGAGGTCCTTTGGGGCTTTCTTCCCTCTACGACTTCCT
GTTTCCCTTCCATCCCGCCCATGCAGGAGCCACGGCAGCACTCCTGCGAT
CCCTCCCTCCCCCCCTCCTTCCCTCCCTCCCTCCTGATCGAAAGCGAGCA
GCAGGTGGGCCCATATGCCCTGGGTTCCAAGCTGGGCGAAGGTCAATTTG
CAAAGGTGTTTTCCTGTCGAAAGAGAGGCGAGGGAGGGAGGGAAGGAGGC
GAAGAGTATGCGCTGAAGGTGATCAATAAGGAGAAGGTGGCGAGCATAGC
GGCGTTGAGGAGGGTGGATGGTGAGATTGGGGCGCAGCGAACCCTGCGGC
ATAAGGGCATCTTAAAGGTGAAGGATGTCATCAATGGCCGCTTTGGACTC
TATGTGGTGATGGAGAAGGGAGGGAAGGGTAAGTGAGGAAGGGGAGGAAG
AGAGAGAGGGAAAGAAGGAGGGATGGTTTGCTTTTCTCGTATAGAGCCCC
AGTGATCTTTCTACGTACTGAACCCTTCTTCTTTCCCTCTCTTCCCCCCT
CCCTCCCCTTTTCTTTCCTTTTCTAGACCTGTTCGACTACTTCGACGAAC
GAGGCGATGCTCGGCTCCCTGCACAGGACACAGTGACCCTCGCCCGCGCC
GTCTTAGACGCGATCCATTTCTGTCATTCCAGGGGCATTTGCCACCGGGA
CTTAAAACCTGAAAATATTTTGTTGAACACCCGAGGGCGCGCAGCAAGGG
AGGGAAGGAAAGAGGAAAGTGACCTACTGGAGGAGAAGAAGAAGGAGGAG
GAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGGGGAGTCGCTGTTTCAGGT
GAAATTGTGTGATTTTGGTTTGTGTTCCTCCTTCTCTCCCGGTCAGCCGT
TACACGAATTCTGCGGGTCGCCCGGATTTTTTGCTCCGGAGATGATCACG
CATGTCTTGAGTGATGGGGAGGGAGGGAAGATAGAGGGAGGGAGAGGATA
CGATGGGCCGAAAGTTGATTTGTGGTCGATTGGTTGCATTTTGCTGGAGC
TGTCCGTAGGCCATGAGGTCTTCTGTGAGGAATGGATGGTAGCGTATGAT
TATGAGCTGCTGCAGGAGCCGCGAGAGTTTGAGAGGAGGATAGAGGGGTG
CTTGGAGGGGATGGGGAAGACAATGAGGGAGAAGCTGGGTTTGGAAGAGG
ATTTGGTTGACTTTATTCAGGGACTGCTGCAGCTTGACCCGAGGAGGAGG
AGGGGTGTGGAAGAGTGTGCAAGCCATCCGTGGGTGGCTTTGGGGAATGG
AAAGAGTTTTTTGACGGGTGAGCTGAAGGAGGAGGAATGGGAGGGAAGGG
GGGGGGAAGAAGGAAAGGAGAGGTGA back to topCoding sequence (CDS) from alignment at chr14:363370..366145+ >NO14G01080.1 ID=NO14G01080.1|Name=NO14G01080.1|organism=Nannochloropsis oceanica|type=CDS|length=2286bp|location=Sequence derived from alignment at chr14:363370..366145+ (Nannochloropsis oceanica)
ATGGATGAAGGAAGAAGCGACAGTGACGCTTGTGGTAATATTAACCTGGT
CGGGGAGAAGAACGACTCCTTGGGACTGGCGTCCACACTCTCCCCCACCA
CCACACACGCTTCATTCAACTCCACAATCTCTTCTCTTGCCGCCTCTATC
TCCTTGAACACCACTGGGACAGTGCCAAAAGAGGAGAGGAAGGGACAAGG
GCAAAGCTTCTCCTCCACCATTGCCTCCTTTGTCGCCTCCACACATCTCA
ACACTAGTGACTCGGTCCTTCCGACCACCGATCGAAGCAGCAGAGCGAGT
ATCAGATTTAGCGTGGGAGGAGATGAGATTTTGGTGCCCCTACGCCATGG
GCCCCTTCCACGCGAAGAATTGATCAACCTCTTGTCCGTCGCCTTGAATC
CTACTCTACCCGTCATCCCACCAGAGGAGGTGGAAGAGGAGAATGAAGAC
GAGGAAGGAGATGCGGCGCTGGATCGCCCTCGTGGTGCAAGCAGCAAAAG
CAACAGCAGCAGTAGCGGAGAATGGGTTTTGCGTTGCCGCGTCATAAATA
ACGCGTTGTCTGCTCTTGATTCCCCCATCCCACATTGTCGTTCGTCTTCC
GGGCGCGATAATGCTGCTGCTGCTGCTGCTGCTGCAACGACTTTTTCTTC
CTCCTCTTCTTCCTGCGCTTCATGGGCCTCTCCATTCTCTTCATCCTTGC
GTGTTTCGGGGGAGGGGATGGGCGGGAGGGGGGGGAGAGGAGCAGGAGGG
CCACAGGGTTGGAGAAGGGAGTTGTCGGGTGCTGAGAAACAGAGCCGGAC
TGATTTCGACCTGGAAACGGAAACGGATTGTGCCTTGGGTGGGAAAGGAG
GGAGGAAGGGCGAAAAAGAGGACAAATATGAGCAGCTGCAGGTGGAGGTG
GGGACGTTGAGGGAGGAGAATGCGATGCTTCGGTACCGCCTAGCGGAGGT
GGAAGGACACCTGGGGAAGGCGACCGAGAACGTGAGGGCGCTACAGCGGT
CTCAAAAACAGCTTTACAACGATTTCGTCCTCCTCCGAGAAAAATATGAC
GAGGCCAAGACCAACATTGCTGAGGTCCTTTGGGGCTTTCTTCCCTCTAC
GACTTCCTGTTTCCCTTCCATCCCGCCCATGCAGGAGCCACGGCAGCACT
CCTGCGATCCCTCCCTCCCCCCCTCCTTCCCTCCCTCCCTCCTGATCGAA
AGCGAGCAGCAGGTGGGCCCATATGCCCTGGGTTCCAAGCTGGGCGAAGG
TCAATTTGCAAAGGTGTTTTCCTGTCGAAAGAGAGGCGAGGGAGGGAGGG
AAGGAGGCGAAGAGTATGCGCTGAAGGTGATCAATAAGGAGAAGGTGGCG
AGCATAGCGGCGTTGAGGAGGGTGGATGGTGAGATTGGGGCGCAGCGAAC
CCTGCGGCATAAGGGCATCTTAAAGGTGAAGGATGTCATCAATGGCCGCT
TTGGACTCTATGTGGTGATGGAGAAGGGAGGGAAGGACCTGTTCGACTAC
TTCGACGAACGAGGCGATGCTCGGCTCCCTGCACAGGACACAGTGACCCT
CGCCCGCGCCGTCTTAGACGCGATCCATTTCTGTCATTCCAGGGGCATTT
GCCACCGGGACTTAAAACCTGAAAATATTTTGTTGAACACCCGAGGGCGC
GCAGCAAGGGAGGGAAGGAAAGAGGAAAGTGACCTACTGGAGGAGAAGAA
GAAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGGGGAGTCGC
TGTTTCAGGTGAAATTGTGTGATTTTGGTTTGTGTTCCTCCTTCTCTCCC
GGTCAGCCGTTACACGAATTCTGCGGGTCGCCCGGATTTTTTGCTCCGGA
GATGATCACGCATGTCTTGAGTGATGGGGAGGGAGGGAAGATAGAGGGAG
GGAGAGGATACGATGGGCCGAAAGTTGATTTGTGGTCGATTGGTTGCATT
TTGCTGGAGCTGTCCGTAGGCCATGAGGTCTTCTGTGAGGAATGGATGGT
AGCGTATGATTATGAGCTGCTGCAGGAGCCGCGAGAGTTTGAGAGGAGGA
TAGAGGGGTGCTTGGAGGGGATGGGGAAGACAATGAGGGAGAAGCTGGGT
TTGGAAGAGGATTTGGTTGACTTTATTCAGGGACTGCTGCAGCTTGACCC
GAGGAGGAGGAGGGGTGTGGAAGAGTGTGCAAGCCATCCGTGGGTGGCTT
TGGGGAATGGAAAGAGTTTTTTGACGGGTGAGCTGAAGGAGGAGGAATGG
GAGGGAAGGGGGGGGGAAGAAGGAAAGGAGAGGTGA back to top
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