NO14G01060.1, NO14G01060.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO14G01060.1
Unique Name	NO14G01060.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3714
Alignment location	chr14:353401..357517 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr14	genome	chr14:353401..357517 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO14G01060.1 vs.
Match: EWM24707.1 (heat shock transcription factor [Nannochloropsis gaditana])

HSP 1 Score: 439.5 bits (1129), Expect = 2.100e-119
Identity = 336/733 (45.84%), Postives = 413/733 (56.34%), Query Frame = 0

Query:   32 MTSSAMAFLKE----EEEHHQGAGPRG--SSSRPSTRHEAAAAPRDYPAAGEDEDDIQSDLVPSANTFIRKLYQMVTNENNDIIAFTPDGLSFHVKDPARLESEILPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQHHKPHLLDELKRKPSASLVKSRTGSATTRRTITSTTTSRSRSSTSGNDSSSDHDDNSQVVLGSNGRVASAAGGAGRRNGGRGQSQSPDSGNLSSPPSSSTTSPSTSPGRQDGPKKRRRNFHQQEQQHKEVEEEEEEKEEDDLYSSFTSVSASSSYASLSSSSSSSLSSSSSTHRIPRQQVRGTGGVTGAGGLSCREALTDATTAFEGHKWKKQQQQRQRGDDEEDEEEGEGEEEEREGEYCYREDAMEFSYWQAPSH--EEEGEVNEQEEEEACWAIKKMMMGGTGEEKQQQQQVVEGGFDEGVQELPEDDEMVVVMPAGEEYRSFENVPTATDYKPAPPSLPPFSSVSCVSSHGQSTQLHQQHQSMMGHQEEKTGSATFESSYSSQGRSSSRTGTHTPLPCTSFSP--YPSSFTPAAFSAYVPTPEEHLAWAKIQSYWNSAGPSLQQALILSLPSQLHQAWTSFFLVIPPFQSQEGMIHACHSLLSTSPALAASVHEHRLALDPLAAASPDKTFFLQAQQQHQKEKE-------AGHNGRALREVLGFGLNHLMEAARSLSPLDVSQAAMALRECLQAWKGHTGRLL 748
            MT+ AMAFL +    E+E  Q     G   + RP+TR E A   R    A ED++DIQSDLVPSANTFIRKL+QMVT+ENNDII+FTPDGLSFHVKDP RLE+E+LPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQ  KPHLLD+LKRKPSASLVKSRT S                SS  G+ S   H        G++  V      +G R G R  S      + ++ PSSS +SPS SP R  G  KR R                  ++E  L        ASS  +SL+SS SS +    + H +         GVTGA G++C E L+ A ++   +  K  + +R+         E E E+E+ EG        M+ SYWQ P    EEE EV ++EE+EACW +K MMM G       ++   E GF+EG+Q LP+++E+VVV  A     +         +K  PPSLP         +HG         +S +GH   K                        PLP  SF P   P    P   ++Y P+ EE   W  IQS W++AG S QQAL+ SLPS  HQAW SFFL+IPPFQ+ + +I ACH LL ++PALAASV EHR ALDPL   S D TF L A    ++ ++       AGHN RALREVLGFGLNHL+E+AR L   + S AA+ALRECLQAWK H GR L
Sbjct:    1 MTNKAMAFLGDQHHREDERRQSIECSGLQHAIRPATRQETALPSRSNSTASEDDEDIQSDLVPSANTFIRKLFQMVTSENNDIISFTPDGLSFHVKDPVRLENEVLPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQQGKPHLLDDLKRKPSASLVKSRTES----------------SSRRGSGSMGRHG------AGNSHSVGRPMSASGSRRGSRSVSPLCSFESGTTTPSSSDSSPSISPSR--GALKRTR------------------RQEASL------SRASSESSSLTSSESSPVPYDDAKHLV--------AGVTGA-GMTCLETLSQAASSVGQNAPKAARLEREAAASYGSHGEEEQEQEQEEG--------MQVSYWQPPDEGPEEEVEVQKEEEDEACWVMKTMMMRG-------REGGAESGFEEGMQALPDEEEIVVVTKASFA-PTLAKKEGPQGHKAHPPSLP--------FAHGPRETSPGPEKSSLGHLGVK------------------------PLPPPSFPPSSLPPDLPPP--TSYHPSREELRTWGYIQSQWSAAGQSQQQALLASLPSHCHQAWASFFLIIPPFQTHQRLIRACHRLLCSNPALAASVTEHRHALDPL-GRSADSTFLLPADAGEEEVEKLSIGTVAAGHNDRALREVLGFGLNHLVESARFLHTTEGSPAALALRECLQAWKCHMGRWL 625

The following BLAST results are available for this feature:

BLAST of NO14G01060.1 vs.

BLAST of NO14G01060.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24707.1	2.100e-119	45.84	heat shock transcription factor [Nannochloropsis g...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO14G01060	NO14G01060	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO14G01060.1	NO14G01060.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO14G01060.1.cds1	NO14G01060.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01060.1.cds2	NO14G01060.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01060.1.cds3	NO14G01060.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr14:353401..357517+
coding sequence from alignment at chr14:353401..357517+

mRNA sequence

>NO14G01060.1 ID=NO14G01060.1|Name=NO14G01060.1|organism=Nannochloropsis oceanica|type=mRNA|length=3714bp
CAACTTTCTCCTCACTTTTTGCTTCTGCTTGCTTGTCTTAGTAGAGATGT
TGTTCCATTGGTTTAAAGACGCACGATTTGCGCGCGTCTCCTCTATACGT
CCAACGCTCTTCCACACACTCCATCATTGCCTACACCAAGCCCAGACTGC
ATCCCAGGTTTGTCAAACCATCGCTCAAAACCCCATCGCCAAGCCCATTT
CGGTTGGCCCTTTAATGCGTTGGAGGGTCGCACCCATTTTATTCGTTCCT
TCTTTTTCCCTCGTTACCACTTGCGCGCCCTTGTCACCCAGTGGCACAAC
CTAGAGGTGATGGCATCTTTCAGGAGGAACACAGCATTGCTGTGGCTACG
GCACCATTGATTACGCTGCTCTCTTGTTGGGGTTGGCCCAACGTTGCTGT
TGAACACCACCGCCCATGTCCCATGGAAGAACATTTGAACCTTGGGTGTG
ATGCACAGACACTCACTTTACATTCTCATGCCGCCCCCTTTGCCACTACA
CACCACAGTTTGCGAATGACCAGCAGCGCCATGGCCTTTTTGAAGGAGGA
GGAGGAACACCATCAAGGTGCGGGACCCCGCGGTAGTAGTTCCCGCCCCT
CCACGCGCCACGAGGCCGCCGCAGCCCCCCGGGACTACCCTGCGGCGGGG
GAAGACGAGGATGACATCCAGAGCGACCTGGTGCCCTCGGCCAACACCTT
CATCCGCAAGCTCTATCAAATGGTCACCAATGAGAACAACGACATTATCG
CCTTTACACCCGACGGCCTCTCCTTCCATGTCAAGGACCCCGCACGCCTT
GAAAGCGAGATTCTTCCTAAATATTTCCGTCACTCCCGCTTTCAATCCCT
GGTCCGTCAACTCAACTTTTACGACTTTAAGAAGATCAGCAAAGAGAGGG
TCATCTGGATCTATCGCCACAAGCTCTTTCAGCACCATAAACCCCACTTG
CTCGACGAGCTTAAACGCAAACCATCCGCCTCCCTCGTCAAGAGCCGCAC
GGGATCAGCCACGACCCGCCGTACCATCACTTCCACCACCACCAGCAGGA
GCAGGAGCAGCACCAGCGGCAACGACAGCAGCAGCGACCATGACGACAAC
AGTCAAGTCGTCTTGGGCAGCAACGGCCGCGTGGCCTCCGCGGCGGGTGG
GGCAGGGCGTCGAAATGGAGGAAGAGGACAATCACAGTCGCCCGATTCAG
GGAATTTGTCCTCGCCCCCCTCTTCCTCCACCACTAGCCCCAGCACCTCT
CCCGGGCGGCAGGACGGTCCCAAGAAGCGGAGGCGCAACTTCCACCAGCA
GGAGCAGCAGCACAAGGAGGTGGAGGAGGAAGAGGAGGAGAAGGAGGAGG
ACGATCTCTACTCGTCTTTCACTTCGGTCTCAGCCTCCTCATCTTATGCA
TCCCTCTCCTCGTCCTCGTCCTCGTCCTTGTCTTCCTCCTCCTCCACCCA
CCGCATTCCTCGACAGCAAGTGCGAGGGACGGGAGGTGTGACGGGTGCGG
GTGGTTTGAGCTGCCGGGAGGCACTCACCGACGCTACTACAGCCTTTGAA
GGGCATAAATGGAAGAAGCAGCAGCAGCAGCGACAGCGGGGTGACGATGA
AGAGGACGAGGAAGAGGGAGAAGGGGAGGAGGAAGAGAGGGAGGGCGAGT
ATTGTTACCGAGAGGATGCAATGGAGTTTTCTTACTGGCAAGCCCCTTCG
CACGAGGAAGAGGGGGAGGTCAATGAGCAGGAGGAAGAGGAGGCGTGTTG
GGCGATCAAGAAGATGATGATGGGCGGAACGGGGGAGGAGAAGCAGCAGC
AGCAGCAGGTAGTGGAGGGCGGGTTTGATGAGGGAGTGCAGGAGCTGCCG
GAGGACGACGAGATGGTCGTGGTCATGCCGGCAGGAGAAGAGTATCGGTC
TTTCGAAAATGTGCCGACGGCAACGGACTACAAGCCAGCCCCTCCCTCCC
TCCCTCCCTTCTCCTCCGTCTCCTGCGTCTCGTCCCATGGGCAATCTACC
CAGCTGCACCAGCAGCATCAATCGATGATGGGCCACCAAGAGGAAAAGAC
GGGCAGCGCCACCTTCGAGAGCAGCTACAGCAGCCAGGGCAGGAGCAGCA
GCCGCACGGGCACCCACACACCCCTCCCTTGCACTTCCTTCTCCCCCTAT
CCGTCGTCCTTCACTCCTGCCGCCTTCTCCGCCTACGTCCCGACGCCCGA
GGAGCACCTGGCTTGGGCGAAAATTCAATCCTACTGGAACTCCGCCGGCC
CCTCCCTCCAGCAAGCCCTAATTCTCTCCCTCCCCTCCCAGCTCCACCAA
GCTTGGACCTCCTTCTTCCTCGTCATTCCTCCCTTCCAAAGCCAGGAAGG
GATGATCCACGCATGTCACAGTCTCTTGTCCACATCGCCTGCGCTCGCCG
CGTCCGTGCACGAACACCGCCTGGCTCTGGACCCCCTCGCGGCCGCCAGC
CCGGACAAGACCTTTTTCCTCCAGGCGCAGCAGCAGCACCAGAAGGAGAA
AGAGGCAGGGCACAATGGACGGGCGCTGAGGGAGGTGTTGGGCTTCGGGC
TGAACCACCTGATGGAGGCGGCGCGGTCTCTGTCCCCCCTGGACGTCTCC
CAGGCAGCCATGGCCCTGCGGGAGTGTCTACAGGCCTGGAAGGGGCATAC
GGGAAGGCTATTGTAGAGGATGGAATCAGGGAGGGAAGGAGGGAAATGAG
GCAGGCTCATAGAGCGTGGGCATGTGACATATCTCCGTTGGCGCGTTTGT
TTACTATACTGGTCTTCTCGATGGGATGGGTGTGTATGAGAGAGAGGCAA
TACACAAGAAAAAGAGAAGAGGAGGAACAGCATAAAGAAGAGGAGCAAGA
TATGGAAATATGAGTGTATTCACCATGTGTATTAATATCAAACGTGAGCA
CGCGGTCGGCCGAAAAGATGAAGTCCAATCTTTCGTCCATATTTGCTCCC
ATGCTCAGAATGATTAAGAAAATAATCTTACCCCAGCCGGTTCTGTGTAT
GTGTGTATGCCTGTGTCTATGTATCTACCAAACAAAACTGTATGTGTGAG
CGTATCTGCGTGTGTGTGTTGCTGCCTTCTGTCCACAAACCAGCTACAAG
CAAGCTCTGAGAAGCGAAAACGATATACAAGAAGAGGAGTAGAGGGAATA
ATGACTCAGCCTCATCGGCACCAAGCGAGCTATTTACAATAATATAAGGA
GCCGAAGGAAGAAAACGAGAAAGGAAAAAAGAGAGGAAAATGGGAAAACT
ACAGCCAAAAAAATGAATGACAAGGGGAGAAGAAAGACACGAAAAGGACG
AGGGGCAACCGCGCCAGAAGAAGGAAGGAGAGGGGGAGATGAAGGAAAAG
ATGATGACGACGATGAAGAAAGAAGATCAATAACAACAACGAAAGCGACC
CCCCCCCCCAAAAGACAAGAACAACCACTAAAGTATGTAAAGACAAAGAA
AGAGAGTAATATAAAAAGGGGGAAGGAACAAGCAAAGTGCATGCACGCAT
GTAGAGCCACCCCTCACCCATCAAAGCACTCTGTTTTTATACTAATACCG
TCATAAGCACCAACAGCCAAGGAAAAATAAATCGAGAGGAGAGAAAGAGA
CAAAAGGGGTGTCTCGACACGGGGTTAAGAGAGGAAAACGGGAAAATAAG
AGGAAACAGCCTCAGAAAGTTTGATAAGGAACGACTCATGCATGAATCAA
TTGTACTACCGACA

protein sequence of NO14G01060.1

>NO14G01060.1-protein ID=NO14G01060.1-protein|Name=NO14G01060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=748bp
MEEHLNLGCDAQTLTLHSHAAPFATTHHSLRMTSSAMAFLKEEEEHHQGA
GPRGSSSRPSTRHEAAAAPRDYPAAGEDEDDIQSDLVPSANTFIRKLYQM
VTNENNDIIAFTPDGLSFHVKDPARLESEILPKYFRHSRFQSLVRQLNFY
DFKKISKERVIWIYRHKLFQHHKPHLLDELKRKPSASLVKSRTGSATTRR
TITSTTTSRSRSSTSGNDSSSDHDDNSQVVLGSNGRVASAAGGAGRRNGG
RGQSQSPDSGNLSSPPSSSTTSPSTSPGRQDGPKKRRRNFHQQEQQHKEV
EEEEEEKEEDDLYSSFTSVSASSSYASLSSSSSSSLSSSSSTHRIPRQQV
RGTGGVTGAGGLSCREALTDATTAFEGHKWKKQQQQRQRGDDEEDEEEGE
GEEEEREGEYCYREDAMEFSYWQAPSHEEEGEVNEQEEEEACWAIKKMMM
GGTGEEKQQQQQVVEGGFDEGVQELPEDDEMVVVMPAGEEYRSFENVPTA
TDYKPAPPSLPPFSSVSCVSSHGQSTQLHQQHQSMMGHQEEKTGSATFES
SYSSQGRSSSRTGTHTPLPCTSFSPYPSSFTPAAFSAYVPTPEEHLAWAK
IQSYWNSAGPSLQQALILSLPSQLHQAWTSFFLVIPPFQSQEGMIHACHS
LLSTSPALAASVHEHRLALDPLAAASPDKTFFLQAQQQHQKEKEAGHNGR
ALREVLGFGLNHLMEAARSLSPLDVSQAAMALRECLQAWKGHTGRLL*

mRNA from alignment at chr14:353401..357517+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO14G01060.1 ID=NO14G01060.1|Name=NO14G01060.1|organism=Nannochloropsis oceanica|type=mRNA|length=4117bp|location=Sequence derived from alignment at chr14:353401..357517+ (Nannochloropsis oceanica)
CAACTTTCTCCTCACTTTTTGCTTCTGCTTGCTTGTCTTAGTAGAGATGT
TGTTCCATTGGTTTAAAGACGCACGATTTGCGCGCGTCTCCTCTATACGT
CCAACGCTCTTCCACACACTCCATCATTGCCTACACCAAGCCCAGACTGC
ATCCCAGGTTTGTCAAACCATCGCTCAAAACCCCATCGCCAAGCCCATTT
CGGTTGGCCCTTTAATGCGTTGGAGGGTCGCACCCATTTTATTCGTTCCT
TCTTTTTCCCTCGTTACCACTTGCGCGCCCTTGTCACCCAGTGGCACAAC
CTAGAGGTGATGGCATCTTTCAGGAGGAACACAGCATTGCTGTGGCTACG
GCACCATTGATTACGCTGCTCTCTTGTTGGGGTTGGCCCAACGTTGCTGT
TGAACACCACCGCCCATGTCCCATGGAAGAACATTTGAACCTTGGGTGTG
ATGCACAGACACTCACTTTACATTCTCATGCCGCCCCCTTTGCCACTACA
CACCACAGTTTGCGAATGACCAGCAGCGCCATGGCCTTTTTGAAGGAGGA
GGAGGAACACCATCAAGGTGCGGGACCCCGCGGTAGTAGTTCCCGCCCCT
CCACGCGCCACGAGGCCGCCGCAGCCCCCCGGGACTACCCTGCGGCGGGG
GAAGACGAGGATGACATCCAGAGCGACCTGGTGCCCTCGGCCAACACCTT
CATCCGCAAGCTCTATCAAATGGTCACCAATGAGAACAACGACATTATCG
CCTTTACACCCGGTACGTTTTTGGTGGCCTCATCCGACCCCTCCCCTTGC
CCATGACCCTCTCCCGCGCGCCCCCTGTTCTCAGTCTCCCTGTACAATTG
TCCGTGCTTGGGCGGCCTTATCGCCTTGCTTCGTCTTTTCATTCAATACC
ATGCCCGCATCCCTCTCATCCCCTCACTCATCCCCCCTTCTTCCCTCCCT
CCTTCTCTCGGGCATTCCTCAGACGGCCTCTCCTTCCATGTCAAGGACCC
CGCACGCCTTGAAAGCGAGATTCTTCCTAAATATTTCCGTCACTCCCGCT
TTCAATCCCTGGTCCGTCAACTCAACTTTTACGACTTTAAGAAGATCAGG
TATGCCTTCCATTTCCTTCTTCCTTCCTTTCCTTCCTCCCTGCCCCGCTC
CCTCCTTCCCTCCTCCCTGCCCCGCTCCCTCCTTCCCTCCCTTCCTCCCT
CTCTCCCTAACACAACGTATCGGAGCCCTTTTGCATGCGCCAGTGAATGG
CACTAATTCAATCACTCTTTACACATACATGTGCACTGATAGCAAAGAGA
GGGTCATCTGGATCTATCGCCACAAGCTCTTTCAGCACCATAAACCCCAC
TTGCTCGACGAGCTTAAACGCAAACCATCCGCCTCCCTCGTCAAGAGCCG
CACGGGATCAGCCACGACCCGCCGTACCATCACTTCCACCACCACCAGCA
GGAGCAGGAGCAGCACCAGCGGCAACGACAGCAGCAGCGACCATGACGAC
AACAGTCAAGTCGTCTTGGGCAGCAACGGCCGCGTGGCCTCCGCGGCGGG
TGGGGCAGGGCGTCGAAATGGAGGAAGAGGACAATCACAGTCGCCCGATT
CAGGGAATTTGTCCTCGCCCCCCTCTTCCTCCACCACTAGCCCCAGCACC
TCTCCCGGGCGGCAGGACGGTCCCAAGAAGCGGAGGCGCAACTTCCACCA
GCAGGAGCAGCAGCACAAGGAGGTGGAGGAGGAAGAGGAGGAGAAGGAGG
AGGACGATCTCTACTCGTCTTTCACTTCGGTCTCAGCCTCCTCATCTTAT
GCATCCCTCTCCTCGTCCTCGTCCTCGTCCTTGTCTTCCTCCTCCTCCAC
CCACCGCATTCCTCGACAGCAAGTGCGAGGGACGGGAGGTGTGACGGGTG
CGGGTGGTTTGAGCTGCCGGGAGGCACTCACCGACGCTACTACAGCCTTT
GAAGGGCATAAATGGAAGAAGCAGCAGCAGCAGCGACAGCGGGGTGACGA
TGAAGAGGACGAGGAAGAGGGAGAAGGGGAGGAGGAAGAGAGGGAGGGCG
AGTATTGTTACCGAGAGGATGCAATGGAGTTTTCTTACTGGCAAGCCCCT
TCGCACGAGGAAGAGGGGGAGGTCAATGAGCAGGAGGAAGAGGAGGCGTG
TTGGGCGATCAAGAAGATGATGATGGGCGGAACGGGGGAGGAGAAGCAGC
AGCAGCAGCAGGTAGTGGAGGGCGGGTTTGATGAGGGAGTGCAGGAGCTG
CCGGAGGACGACGAGATGGTCGTGGTCATGCCGGCAGGAGAAGAGTATCG
GTCTTTCGAAAATGTGCCGACGGCAACGGACTACAAGCCAGCCCCTCCCT
CCCTCCCTCCCTTCTCCTCCGTCTCCTGCGTCTCGTCCCATGGGCAATCT
ACCCAGCTGCACCAGCAGCATCAATCGATGATGGGCCACCAAGAGGAAAA
GACGGGCAGCGCCACCTTCGAGAGCAGCTACAGCAGCCAGGGCAGGAGCA
GCAGCCGCACGGGCACCCACACACCCCTCCCTTGCACTTCCTTCTCCCCC
TATCCGTCGTCCTTCACTCCTGCCGCCTTCTCCGCCTACGTCCCGACGCC
CGAGGAGCACCTGGCTTGGGCGAAAATTCAATCCTACTGGAACTCCGCCG
GCCCCTCCCTCCAGCAAGCCCTAATTCTCTCCCTCCCCTCCCAGCTCCAC
CAAGCTTGGACCTCCTTCTTCCTCGTCATTCCTCCCTTCCAAAGCCAGGA
AGGGATGATCCACGCATGTCACAGTCTCTTGTCCACATCGCCTGCGCTCG
CCGCGTCCGTGCACGAACACCGCCTGGCTCTGGACCCCCTCGCGGCCGCC
AGCCCGGACAAGACCTTTTTCCTCCAGGCGCAGCAGCAGCACCAGAAGGA
GAAAGAGGCAGGGCACAATGGACGGGCGCTGAGGGAGGTGTTGGGCTTCG
GGCTGAACCACCTGATGGAGGCGGCGCGGTCTCTGTCCCCCCTGGACGTC
TCCCAGGCAGCCATGGCCCTGCGGGAGTGTCTACAGGCCTGGAAGGGGCA
TACGGGAAGGCTATTGTAGAGGATGGAATCAGGGAGGGAAGGAGGGAAAT
GAGGCAGGCTCATAGAGCGTGGGCATGTGACATATCTCCGTTGGCGCGTT
TGTTTACTATACTGGTCTTCTCGATGGGATGGGTGTGTATGAGAGAGAGG
CAATACACAAGAAAAAGAGAAGAGGAGGAACAGCATAAAGAAGAGGAGCA
AGATATGGAAATATGAGTGTATTCACCATGTGTATTAATATCAAACGTGA
GCACGCGGTCGGCCGAAAAGATGAAGTCCAATCTTTCGTCCATATTTGCT
CCCATGCTCAGAATGATTAAGAAAATAATCTTACCCCAGCCGGTTCTGTG
TATGTGTGTATGCCTGTGTCTATGTATCTACCAAACAAAACTGTATGTGT
GAGCGTATCTGCGTGTGTGTGTTGCTGCCTTCTGTCCACAAACCAGCTAC
AAGCAAGCTCTGAGAAGCGAAAACGATATACAAGAAGAGGAGTAGAGGGA
ATAATGACTCAGCCTCATCGGCACCAAGCGAGCTATTTACAATAATATAA
GGAGCCGAAGGAAGAAAACGAGAAAGGAAAAAAGAGAGGAAAATGGGAAA
ACTACAGCCAAAAAAATGAATGACAAGGGGAGAAGAAAGACACGAAAAGG
ACGAGGGGCAACCGCGCCAGAAGAAGGAAGGAGAGGGGGAGATGAAGGAA
AAGATGATGACGACGATGAAGAAAGAAGATCAATAACAACAACGAAAGCG
ACCCCCCCCCCCAAAAGACAAGAACAACCACTAAAGTATGTAAAGACAAA
GAAAGAGAGTAATATAAAAAGGGGGAAGGAACAAGCAAAGTGCATGCACG
CATGTAGAGCCACCCCTCACCCATCAAAGCACTCTGTTTTTATACTAATA
CCGTCATAAGCACCAACAGCCAAGGAAAAATAAATCGAGAGGAGAGAAAG
AGACAAAAGGGGTGTCTCGACACGGGGTTAAGAGAGGAAAACGGGAAAAT
AAGAGGAAACAGCCTCAGAAAGTTTGATAAGGAACGACTCATGCATGAAT
CAATTGTACTACCGACA

Coding sequence (CDS) from alignment at chr14:353401..357517+

>NO14G01060.1 ID=NO14G01060.1|Name=NO14G01060.1|organism=Nannochloropsis oceanica|type=CDS|length=2244bp|location=Sequence derived from alignment at chr14:353401..357517+ (Nannochloropsis oceanica)
ATGGAAGAACATTTGAACCTTGGGTGTGATGCACAGACACTCACTTTACA
TTCTCATGCCGCCCCCTTTGCCACTACACACCACAGTTTGCGAATGACCA
GCAGCGCCATGGCCTTTTTGAAGGAGGAGGAGGAACACCATCAAGGTGCG
GGACCCCGCGGTAGTAGTTCCCGCCCCTCCACGCGCCACGAGGCCGCCGC
AGCCCCCCGGGACTACCCTGCGGCGGGGGAAGACGAGGATGACATCCAGA
GCGACCTGGTGCCCTCGGCCAACACCTTCATCCGCAAGCTCTATCAAATG
GTCACCAATGAGAACAACGACATTATCGCCTTTACACCCGACGGCCTCTC
CTTCCATGTCAAGGACCCCGCACGCCTTGAAAGCGAGATTCTTCCTAAAT
ATTTCCGTCACTCCCGCTTTCAATCCCTGGTCCGTCAACTCAACTTTTAC
GACTTTAAGAAGATCAGCAAAGAGAGGGTCATCTGGATCTATCGCCACAA
GCTCTTTCAGCACCATAAACCCCACTTGCTCGACGAGCTTAAACGCAAAC
CATCCGCCTCCCTCGTCAAGAGCCGCACGGGATCAGCCACGACCCGCCGT
ACCATCACTTCCACCACCACCAGCAGGAGCAGGAGCAGCACCAGCGGCAA
CGACAGCAGCAGCGACCATGACGACAACAGTCAAGTCGTCTTGGGCAGCA
ACGGCCGCGTGGCCTCCGCGGCGGGTGGGGCAGGGCGTCGAAATGGAGGA
AGAGGACAATCACAGTCGCCCGATTCAGGGAATTTGTCCTCGCCCCCCTC
TTCCTCCACCACTAGCCCCAGCACCTCTCCCGGGCGGCAGGACGGTCCCA
AGAAGCGGAGGCGCAACTTCCACCAGCAGGAGCAGCAGCACAAGGAGGTG
GAGGAGGAAGAGGAGGAGAAGGAGGAGGACGATCTCTACTCGTCTTTCAC
TTCGGTCTCAGCCTCCTCATCTTATGCATCCCTCTCCTCGTCCTCGTCCT
CGTCCTTGTCTTCCTCCTCCTCCACCCACCGCATTCCTCGACAGCAAGTG
CGAGGGACGGGAGGTGTGACGGGTGCGGGTGGTTTGAGCTGCCGGGAGGC
ACTCACCGACGCTACTACAGCCTTTGAAGGGCATAAATGGAAGAAGCAGC
AGCAGCAGCGACAGCGGGGTGACGATGAAGAGGACGAGGAAGAGGGAGAA
GGGGAGGAGGAAGAGAGGGAGGGCGAGTATTGTTACCGAGAGGATGCAAT
GGAGTTTTCTTACTGGCAAGCCCCTTCGCACGAGGAAGAGGGGGAGGTCA
ATGAGCAGGAGGAAGAGGAGGCGTGTTGGGCGATCAAGAAGATGATGATG
GGCGGAACGGGGGAGGAGAAGCAGCAGCAGCAGCAGGTAGTGGAGGGCGG
GTTTGATGAGGGAGTGCAGGAGCTGCCGGAGGACGACGAGATGGTCGTGG
TCATGCCGGCAGGAGAAGAGTATCGGTCTTTCGAAAATGTGCCGACGGCA
ACGGACTACAAGCCAGCCCCTCCCTCCCTCCCTCCCTTCTCCTCCGTCTC
CTGCGTCTCGTCCCATGGGCAATCTACCCAGCTGCACCAGCAGCATCAAT
CGATGATGGGCCACCAAGAGGAAAAGACGGGCAGCGCCACCTTCGAGAGC
AGCTACAGCAGCCAGGGCAGGAGCAGCAGCCGCACGGGCACCCACACACC
CCTCCCTTGCACTTCCTTCTCCCCCTATCCGTCGTCCTTCACTCCTGCCG
CCTTCTCCGCCTACGTCCCGACGCCCGAGGAGCACCTGGCTTGGGCGAAA
ATTCAATCCTACTGGAACTCCGCCGGCCCCTCCCTCCAGCAAGCCCTAAT
TCTCTCCCTCCCCTCCCAGCTCCACCAAGCTTGGACCTCCTTCTTCCTCG
TCATTCCTCCCTTCCAAAGCCAGGAAGGGATGATCCACGCATGTCACAGT
CTCTTGTCCACATCGCCTGCGCTCGCCGCGTCCGTGCACGAACACCGCCT
GGCTCTGGACCCCCTCGCGGCCGCCAGCCCGGACAAGACCTTTTTCCTCC
AGGCGCAGCAGCAGCACCAGAAGGAGAAAGAGGCAGGGCACAATGGACGG
GCGCTGAGGGAGGTGTTGGGCTTCGGGCTGAACCACCTGATGGAGGCGGC
GCGGTCTCTGTCCCCCCTGGACGTCTCCCAGGCAGCCATGGCCCTGCGGG
AGTGTCTACAGGCCTGGAAGGGGCATACGGGAAGGCTATTGTAG

Synonyms

Publications