NO14G00420.1, NO14G00420.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G00420.1
Unique NameNO14G00420.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1401
Alignment locationchr14:168564..170352 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:168564..170352 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00420.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G00420NO14G00420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G00420.1NO14G00420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G00420.1.cds1NO14G00420.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00420.1.cds2NO14G00420.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00420.1.cds3NO14G00420.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G00420.1 ID=NO14G00420.1|Name=NO14G00420.1|organism=Nannochloropsis oceanica|type=mRNA|length=1401bp
ATGGTCCCACCACTGCCACGGCTGCTGCCAAAGTCCTCTGCACCAACCTC
CCCCCTTTCTCCCGCCCTCCCTCCACCACCGTCGTCGTCCCCACCGACAC
TCATTCTTCGAATCAAGCGCCGCCGGGAGGAGACCCCTGTGCCCTTACTT
CTCCTAGAGGCCACCGCCGCGGGGCCCCACAAGCGGGTCCGTCCCACCTT
GTCGGCACGTCTAGCTGCTTTGACAACTCAAGAGCGGGAGGATGAGGGAA
GGAGGGAGGAAGGAGAAAAGGGAAATATGACAGGGGAGGAACGGAGGAAA
CGCTTTGTGTTCAGTCGAGTTGAGACGGTAGAGACAACTGGAATGGATGA
AAACGAGGACGATGGAGGGCAGCAACAGCAGCAGCAACACGGGGGGAGGC
GGCTCCAAGGGTGGGAGAAGCCACGTCTTGCACAACGACGAGGATACGGA
GCAGCGCAGGAGAGAGGAATATTTCGGGAGATCCGACGGCTCTATTCTAG
GATAGATGATGAGGAGGAAGGAGAGAATAGAAGAGGAGGAGGAATTGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGGGAAGGGAAA
AGAAGAAGAGGAGGAGGAAGAGAAGGCGCCAACATCAATCATCAGCGGAA
GAACGTGGGAGGAAGGGAGGGAGGAGTGACGGCACTGATGGCATGTGTAT
GGAGGGGGGAGGTACAAGCGACCGCGAGTCTCTTGGCTGCAGGGGCAGAC
GTGAAGGTGAGGGACTGGGACGGACGGACGGCCTTGGAATGGGCCGAAGA
GGGAGGGAGGAGGGGAGGGAGGGAGGGAGGATGGGCGGGGTGTGCGATGA
TGGTGAGGGAGGCGATGTTTGAGGCGCTTGAGGAGGAGGAGGAGGAGGAA
TGGGCGTACGTGTACGATGTATATTCGATGGTGAGAAAGGGGGTGAAGGA
GGGAGGAAGGAGGGAGGAGGAGGTGCCTGTGGACGGGGGGGAGGGAGGGG
GAGAAGAGGAGGACTCGAACGAGGAAGGGCACTGGGCAAATGACTACCCG
GAAGAGGAGAGCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGG
GAGGGAAGGGAGCGAGGGGAAGGGGGCGGGGCTGGGAGGGAGGTACCGTC
TGAGGAGTGGGAGTAGTGAGGAAGAGGAGGAAGAGGGGGAGGAGGAAGAG
AGAGGAAGGGGGAAAGGGAGGATAAGAGGGAGGAGAAGGTTTTGGGGCGG
GGCGACTGGATGTCTGGGGATGGGAGGAAGGATGATGGTGATTGGAAGGG
GAGAGAGTGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAG
GAGGGGGAGGGGGAAGAGGAAGAGGAAGAGGAGGGGGAGGAGGAAGAATA
A
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protein sequence of NO14G00420.1

>NO14G00420.1-protein ID=NO14G00420.1-protein|Name=NO14G00420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=467bp
MVPPLPRLLPKSSAPTSPLSPALPPPPSSSPPTLILRIKRRREETPVPLL
LLEATAAGPHKRVRPTLSARLAALTTQEREDEGRREEGEKGNMTGEERRK
RFVFSRVETVETTGMDENEDDGGQQQQQQHGGRRLQGWEKPRLAQRRGYG
AAQERGIFREIRRLYSRIDDEEEGENRRGGGIGGGGGGGGGGEGGGGEGK
RRRGGGREGANINHQRKNVGGREGGVTALMACVWRGEVQATASLLAAGAD
VKVRDWDGRTALEWAEEGGRRGGREGGWAGCAMMVREAMFEALEEEEEEE
WAYVYDVYSMVRKGVKEGGRREEEVPVDGGEGGGEEEDSNEEGHWANDYP
EEESEEEEEEEEEEEEGREGSEGKGAGLGGRYRLRSGSSEEEEEEGEEEE
RGRGKGRIRGRRRFWGGATGCLGMGGRMMVIGRGESEEEEEEEEEEEEEE
EGEGEEEEEEEGEEEE*
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mRNA from alignment at chr14:168564..170352-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G00420.1 ID=NO14G00420.1|Name=NO14G00420.1|organism=Nannochloropsis oceanica|type=mRNA|length=1789bp|location=Sequence derived from alignment at chr14:168564..170352- (Nannochloropsis oceanica)
ATGGTCCCACCACTGCCACGGCTGCTGCCAAAGTCCTCTGCACCAACCTC
CCCCCTTTCTCCCGCCCTCCCTCCACCACCGTCGTCGTCCCCACCGACAC
TCATTCTTCGAATCAAGCGCCGCCGGGAGGAGACCCCTGTGCCCTTACTT
CTCCTAGAGGCCACCGCCGCGGGGCCCCACAAGCGGGTCCGTCCCACCTT
GTCGGCACGTCTAGCTGCTTTGACAACTCAAGAGCGGGAGGATGAGGGAA
GGAGGGAGGAAGGAGAAAAGGGAAATATGACAGGGGAGGAACGGAGGAAA
CGCTTTGTGTTCAGTCGAGTTGAGACGGTAGAGACAACTGGAATGGATGA
AAACGAGGACGATGGAGGGCAGCAACAGCAGCAGCAACACGGGGGGAGGC
GGCTCCAAGGGTGGGAGAAGCCACGTCTTGCACAACGACGAGGATACGGA
GCAGCGCAGGAGAGAGGAATATTTCGGGAGATCCGACGGCTCTATTCTAG
GATAGATGATGAGGAGGAAGGAGAGAATAGAAGAGGAGGAGGAATTGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGGGAAGGGAAA
AGAAGAAGAGGAGGAGGAAGAGAAGTAGGAGGAAGAGAGGGAGGACGAAG
GCGTTTCTTCCACTTCATTGACCTAGCTCGATGCTCTCAGACACCTCCCT
CCTCCCCCTCCTTCCTCCCCCTCCCTCTTCCTCATCCTCCTCGAAGACCT
CATGTTATCTTCTCCCCCGTCGACCGCCAACTCGACGCTGCCATCGCCAC
TGCATTCATGTCCCTCCCTCCCCCCTCCCTCCCTCCCACGCTCCCTCCCC
TCCTGCCTCCGCGCTCCTCTCCCTCATCCTCTCCCAGGGCGCCAACATCA
ATCATCAGCGGAAGAACGTGGGAGGAAGGGAGGGAGGAGTGACGGCACTG
ATGGCATGTGTATGGAGGGGGGAGGTACAAGCGACCGCGAGTCTCTTGGC
TGCAGGGGCAGACGTGAAGGTGAGGGACTGGGACGGACGGACGGCCTTGG
AATGGGCCGAAGAGGGAGGGAGGAGGGGAGGGAGGGAGGGAGGATGGGCG
GGGTGTGCGATGATGGTGAGGGAGGCGATGTTTGAGGCGCTTGAGGAGGA
GGAGGAGGAGGAATGGGCGTACGTGTACGATGTATATTCGATGGTGAGAA
AGGGGGTGAAGGAGGGAGGAAGGAGGGAGGAGGAGGTGCCTGTGGTGAGG
GTCGAAGGACTCTCATTCGTGTCGAAGAAGGGAGGAAGGGAAGGAGGGAA
GGAGGGCGAGGAGGAAGAGGGAGAGGATGTGTTGGTGTTTGAGGAGGGGG
GGGTTGGAGTGAGGACGAGGACGGGGGGGAGGGAGGGGGAGAAGAGGAGG
ACTCGAACGAGGAAGGGCACTGGGCAAATGACTACCCGGAAGAGGAGAGC
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGGGAGGGAAGGGAG
CGAGGGGAAGGGGGCGGGGCTGGGAGGGAGGTACCGTCTGAGGAGTGGGA
GTAGTGAGGAAGAGGAGGAAGAGGGGGAGGAGGAAGAGAGAGGAAGGGGG
AAAGGGAGGATAAGAGGGAGGAGAAGGTTTTGGGGCGGGGCGACTGGATG
TCTGGGGATGGGAGGAAGGATGATGGTGATTGGAAGGGGAGAGAGTGAGG
AGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGGGGAGGGG
GAAGAGGAAGAGGAAGAGGAGGGGGAGGAGGAAGAATAA
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Coding sequence (CDS) from alignment at chr14:168564..170352-

>NO14G00420.1 ID=NO14G00420.1|Name=NO14G00420.1|organism=Nannochloropsis oceanica|type=CDS|length=1401bp|location=Sequence derived from alignment at chr14:168564..170352- (Nannochloropsis oceanica)
ATGGTCCCACCACTGCCACGGCTGCTGCCAAAGTCCTCTGCACCAACCTC
CCCCCTTTCTCCCGCCCTCCCTCCACCACCGTCGTCGTCCCCACCGACAC
TCATTCTTCGAATCAAGCGCCGCCGGGAGGAGACCCCTGTGCCCTTACTT
CTCCTAGAGGCCACCGCCGCGGGGCCCCACAAGCGGGTCCGTCCCACCTT
GTCGGCACGTCTAGCTGCTTTGACAACTCAAGAGCGGGAGGATGAGGGAA
GGAGGGAGGAAGGAGAAAAGGGAAATATGACAGGGGAGGAACGGAGGAAA
CGCTTTGTGTTCAGTCGAGTTGAGACGGTAGAGACAACTGGAATGGATGA
AAACGAGGACGATGGAGGGCAGCAACAGCAGCAGCAACACGGGGGGAGGC
GGCTCCAAGGGTGGGAGAAGCCACGTCTTGCACAACGACGAGGATACGGA
GCAGCGCAGGAGAGAGGAATATTTCGGGAGATCCGACGGCTCTATTCTAG
GATAGATGATGAGGAGGAAGGAGAGAATAGAAGAGGAGGAGGAATTGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGGGAAGGGAAA
AGAAGAAGAGGAGGAGGAAGAGAAGGCGCCAACATCAATCATCAGCGGAA
GAACGTGGGAGGAAGGGAGGGAGGAGTGACGGCACTGATGGCATGTGTAT
GGAGGGGGGAGGTACAAGCGACCGCGAGTCTCTTGGCTGCAGGGGCAGAC
GTGAAGGTGAGGGACTGGGACGGACGGACGGCCTTGGAATGGGCCGAAGA
GGGAGGGAGGAGGGGAGGGAGGGAGGGAGGATGGGCGGGGTGTGCGATGA
TGGTGAGGGAGGCGATGTTTGAGGCGCTTGAGGAGGAGGAGGAGGAGGAA
TGGGCGTACGTGTACGATGTATATTCGATGGTGAGAAAGGGGGTGAAGGA
GGGAGGAAGGAGGGAGGAGGAGGTGCCTGTGGACGGGGGGGAGGGAGGGG
GAGAAGAGGAGGACTCGAACGAGGAAGGGCACTGGGCAAATGACTACCCG
GAAGAGGAGAGCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGG
GAGGGAAGGGAGCGAGGGGAAGGGGGCGGGGCTGGGAGGGAGGTACCGTC
TGAGGAGTGGGAGTAGTGAGGAAGAGGAGGAAGAGGGGGAGGAGGAAGAG
AGAGGAAGGGGGAAAGGGAGGATAAGAGGGAGGAGAAGGTTTTGGGGCGG
GGCGACTGGATGTCTGGGGATGGGAGGAAGGATGATGGTGATTGGAAGGG
GAGAGAGTGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAG
GAGGGGGAGGGGGAAGAGGAAGAGGAAGAGGAGGGGGAGGAGGAAGAATA
A
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Synonyms
Publications