NO14G00360.1, NO14G00360.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G00360.1
Unique NameNO14G00360.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length528
Alignment locationchr14:151569..152280 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:151569..152280 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00360.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G00360NO14G00360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G00360.1NO14G00360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G00360.1.cds1NO14G00360.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00360.1.cds2NO14G00360.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00360.1.cds3NO14G00360.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G00360.1 ID=NO14G00360.1|Name=NO14G00360.1|organism=Nannochloropsis oceanica|type=mRNA|length=528bp
ATGGAGCCTCCCCCCCCGCCGCCCCCCGTGACGGCTACGACGATGGCGGT
GAAGGAGGGGGAGACCGAGGGGGAAGAGGGCGGAGGGGAAGGTAAAGGGA
TGGATGTGGTGGTGGGAGAAGAACCTGTAGCAGCAGCAGCAGCAGAGGTG
GCAGTGGTGGTAGCAGCGGCAGACATGGCGGCGACGACGACAGAAGGTGA
GGCCGGGAAGGAAGTCAAGGAGGAAAAGGAGGAGGAGGAGGAGCAGCAGC
AGCAGCAGCCGGATGAGCCCCAGAAAGAAGAGGCAAGCGAGGGGACCAAA
GAAGCTGTGACTGCTCTCCTGCACGTGAGCAAGAGGGCAGCAGTAGCAGT
CGTAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAAATACAGCAGTTACAGCAGATTCCTCCTCTTTCTGGGGGCCGAAGAGT
GTTTTGAAGAAGAGAAAGAGGGAGGAGGGAAGAGGAAGAAGTTATAGCAC
GATTAGCAGCAACAGGGAGCCGGAGTAA
back to top

protein sequence of NO14G00360.1

>NO14G00360.1-protein ID=NO14G00360.1-protein|Name=NO14G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=176bp
MEPPPPPPPVTATTMAVKEGETEGEEGGGEGKGMDVVVGEEPVAAAAAEV
AVVVAAADMAATTTEGEAGKEVKEEKEEEEEQQQQQPDEPQKEEASEGTK
EAVTALLHVSKRAAVAVVVAAAAAAAAAAAAAAANTAVTADSSSFWGPKS
VLKKRKREEGRGRSYSTISSNREPE*
back to top

mRNA from alignment at chr14:151569..152280+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G00360.1 ID=NO14G00360.1|Name=NO14G00360.1|organism=Nannochloropsis oceanica|type=mRNA|length=712bp|location=Sequence derived from alignment at chr14:151569..152280+ (Nannochloropsis oceanica)
ATGGAGCCTCCCCCCCCGCCGCCCCCCGTGACGGCTACGACGATGGCGGT
GAAGGAGGGGGAGACCGAGGGGGAAGAGGGCGGAGGGGAAGGTAAAGGGA
TGGATGTGGTGGTGGGAGAAGAACCTGTAGCAGCAGCAGCAGCAGAGGTG
GCAGTGGTGGTAGCAGCGGCAGACATGGCGGCGACGACGACAGAAGGTGA
GGCCGGGAAGGAAGTCAAGGAGGAAAAGGAGGAGGAGGAGGAGCAGCAGC
AGCAGCAGCCGGATGAGCCCCAGAAAGAAGAGGCAAGCGAGGGGACCAAA
GAAGCTGTGACTGCTCTCCTGCACGTGAGCAAGAGGGCAGCAGGTGTGGG
GGAGGAGATGGAGGGCATGGTCATGGCGGCAGAAGCAGCCGGGGCAGGCA
CGACTTCCGCCTCCCCCTCGCCCGATCGCTGAGCAACAGTAGCAGTCGTA
GTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAA
TACAGCAGTTACAGCAGGTGCGGCATCAGCAATTGAGTAAGTTAAATGGC
GTGTGTGATTGTATTGAGTGTACATGTGGTTTCCTCTTCACCCTTTCCCT
CTCAGATTCCTCCTCTTTCTGGGGGCCGAAGAGTGTTTTGAAGAAGAGAA
AGAGGGAGGAGGGAAGAGGAAGAAGTTATAGCACGATTAGCAGCAACAGG
GAGCCGGAGTAA
back to top

Coding sequence (CDS) from alignment at chr14:151569..152280+

>NO14G00360.1 ID=NO14G00360.1|Name=NO14G00360.1|organism=Nannochloropsis oceanica|type=CDS|length=528bp|location=Sequence derived from alignment at chr14:151569..152280+ (Nannochloropsis oceanica)
ATGGAGCCTCCCCCCCCGCCGCCCCCCGTGACGGCTACGACGATGGCGGT
GAAGGAGGGGGAGACCGAGGGGGAAGAGGGCGGAGGGGAAGGTAAAGGGA
TGGATGTGGTGGTGGGAGAAGAACCTGTAGCAGCAGCAGCAGCAGAGGTG
GCAGTGGTGGTAGCAGCGGCAGACATGGCGGCGACGACGACAGAAGGTGA
GGCCGGGAAGGAAGTCAAGGAGGAAAAGGAGGAGGAGGAGGAGCAGCAGC
AGCAGCAGCCGGATGAGCCCCAGAAAGAAGAGGCAAGCGAGGGGACCAAA
GAAGCTGTGACTGCTCTCCTGCACGTGAGCAAGAGGGCAGCAGTAGCAGT
CGTAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAAATACAGCAGTTACAGCAGATTCCTCCTCTTTCTGGGGGCCGAAGAGT
GTTTTGAAGAAGAGAAAGAGGGAGGAGGGAAGAGGAAGAAGTTATAGCAC
GATTAGCAGCAACAGGGAGCCGGAGTAA
back to top
Synonyms
Publications