NO14G00240.1, NO14G00240.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO14G00240.1
Unique Name	NO14G00240.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2695
Alignment location	chr14:83335..88538 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr14	genome	chr14:83335..88538 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO14G00240.1 vs.
Match: EWM24774.1 (Acyltransferase 3, partial [Nannochloropsis gaditana])

HSP 1 Score: 610.1 bits (1572), Expect = 9.000e-171
Identity = 286/399 (71.68%), Postives = 338/399 (84.71%), Query Frame = 0

Query:  357 FLATFLLLKKMEKETRPLKRWLPHAYLSRFVRITPAYMFALFFNWKMAPLFSFGPLSKSLWANNSIKCPEQWWRHLLFINTVSPWRQSERNPQCFGHTWYLGDDMMYFMTVPWLVLLYSQGGSKKKLSIILALSVVLGCMAYNGVMAKINNWSPNTWDGNAGARYQVGSFEVPWGRAPSYFIGILTAYIWYEKKQHFPTYKVGAGVWTGIVGAVLALLLAIMYGPVTGSAGVTPCILVTEDCGSSWSTTIKVLIASCARPAWAIGVAAVSLLCFNGQGFWVNSLLSAPIMAPFSFLSYTVYLVHYTVLNFYMASLTGRIRWDFFEFVVTYLGLTMFSHCLALFVALLVEKPAIKLQKLYLDKPTAKMGGNNIGGNEKIVADGSIIKPSRVIELPNAKYL 756
            FLATFLLLKK+EKETRP+ RW+ HAYLSRF+RITPAYMFALFFNWKMAPLFS GPL+++LWAN+S+ CP QWWRHLL+INTVSPW +++R+PQCFGHTWYL DDMM+F TVPWL LLY+QGG +KKLS++L L+VV+GC      +AK++ WSPN WDG+A ARYQ+G+FE+PW RAPSY+IGILTAY+WYEKK+H+P +K+GAG+WT +V    +LLLAIMYGPVTGS GV  CIL   +CGS W   +KVL+A+CARP WA+GVA +SLLCFNGQGFWVNS+LSAPIMAPFSFLS+TVYLVH+TVLNFYMASLT RIRWDFFEFVVTYLG+TMFS CLA+FVA+LVEKP +KLQKLY DKP+    G+  GG       G   K  RVIELPNAKYL
Sbjct:    1 FLATFLLLKKLEKETRPVFRWVGHAYLSRFLRITPAYMFALFFNWKMAPLFSNGPLARTLWANDSMNCPSQWWRHLLYINTVSPWDRAKRDPQCFGHTWYLADDMMFFWTVPWLALLYAQGGMRKKLSVLLVLAVVVGCTLNVAHLAKVHEWSPNMWDGDAAARYQMGAFELPWTRAPSYYIGILTAYVWYEKKKHYPDFKLGAGLWTAVVALTASLLLAIMYGPVTGSHGVRACILTEGECGSDWPEIVKVLLAACARPGWALGVAVISLLCFNGQGFWVNSILSAPIMAPFSFLSFTVYLVHFTVLNFYMASLTSRIRWDFFEFVVTYLGITMFSLCLAVFVAVLVEKPCMKLQKLYFDKPSRTSQGD--GGK-----PGKASKRPRVIELPNAKYL 392

The following BLAST results are available for this feature:

BLAST of NO14G00240.1 vs.

BLAST of NO14G00240.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24774.1	9.000e-171	71.68	Acyltransferase 3, partial [Nannochloropsis gadita...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO14G00240	NO14G00240	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO14G00240.1	NO14G00240.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO14G00240.1.cds1	NO14G00240.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds2	NO14G00240.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds3	NO14G00240.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds4	NO14G00240.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds5	NO14G00240.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds6	NO14G00240.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds7	NO14G00240.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds8	NO14G00240.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds9	NO14G00240.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds10	NO14G00240.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds11	NO14G00240.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds12	NO14G00240.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds13	NO14G00240.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds14	NO14G00240.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00240.1.cds15	NO14G00240.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr14:83335..88538-
coding sequence from alignment at chr14:83335..88538-

mRNA sequence

>NO14G00240.1 ID=NO14G00240.1|Name=NO14G00240.1|organism=Nannochloropsis oceanica|type=mRNA|length=2695bp
CACATAGCTTCTATATCTCGCGCTCAGTCCTTTTGTCGGCCGACACCGAG
GGCAGCTATGAGGTTCTCTCAGACGCTTGCACTCTCTGCCGCTGCGGTGG
TCGTGGTGTGTGTCGCTGGGGCGGAACCCCAAACATTCACCTTGGAGGAC
TGCAAGTCTGCGCTGAGCTCCCTTAAAGAGAAGCCTTACAGCTCGTCTTT
GCCCAGCATGGCCGCTTCGACAGGCAAATTTCCCCTTGCTTACTCGTTCC
AAAATTCCATCGCCCCCGTATTTGCCGTCAAGGCCTTTGGTGCCTTCGAC
ATGTGCCAGGCTCCGTCCCTGTATTCGTGGAACGCCTTGCAGACCCACTT
TTGCACGCTGGGCCAAGACAAAACTGGCATCTGCATGCCCGAAGCCTGCT
CGGAAGAAGTGCTCCGATCCCAGGTGGGTAACAAGGAGTTTGTGGGCTTC
CTGGCTACGCTGGCCATTAATGTCACGATGGCCATGACGCCTGCCTGTGC
GTTTGACCCTCTCCTCACCCCGCACTGCGCCGAGAATCTGGCTGGGCGAG
ATTACTTCGAGCAAATCTACAACGACTGGCTTATCTTCAGTGGGCAGGGA
ATCACCTGCGGAGCTGGTTACACGCCCATGACCGCGGGCGCCAGGCGAAT
GATTGCCCTATGCATCATATTGGGTCTCCTCATATTTGCAGGCACGGCCT
GGGGATTCATGTACCAGCGATCGTTACGGAAAGTGGCAGAAGAGAGCGCG
GGGGTGGGGGAGGAGGAGGAGCATAAAACACTCCCTGACGGATCTCCACG
CTTGCCGCAAGTGGGTGTGCCTCCGCGTGAGAGAGCCGTGGCACGGCCAG
TGCCTGCGTTTTTCAAGGCCTTTGATCTGCGCGACAATTTGAAGGAAATC
TTTGCACTGAACGCCCGCCCGGGGGAGTTTTCTTGTTTTGATGGGATGCG
GGCCATATCGTGTGGGTGGGTCGTAATCTATCACGTCATTCTATGGCAAA
CCCGCTTCATTATGAACCCTGAGGCCCTCCTGCCCCCCACGGGCATTCTG
GCCCATTGGTGGGCGATGCCTCTCTTCAACTTCTCAGGGACTCTGTGCGT
GGACACTTTCCTCTTCATGTCCGCCTTTCTGGCTACCTTTTTGCTGCTCA
AGAAGATGGAGAAAGAGACGCGGCCCCTCAAACGCTGGTTGCCCCACGCG
TATCTCTCCCGTTTTGTCCGCATCACACCTGCCTACATGTTCGCGCTCTT
TTTTAACTGGAAGATGGCACCGCTCTTCTCCTTTGGTCCTTTGTCCAAGT
CGCTGTGGGCAAACAACTCAATCAAATGTCCAGAGCAGTGGTGGCGCCAC
CTTCTCTTCATCAATACCGTCTCGCCCTGGAGGCAATCGGAGCGCAACCC
GCAGTGCTTTGGCCACACGTGGTATCTGGGGGACGACATGATGTACTTCA
TGACTGTGCCTTGGCTCGTATTGCTTTACAGCCAGGGAGGGTCTAAGAAG
AAACTCAGCATCATCCTGGCTTTGAGCGTCGTCTTAGGGTGCATGGCATA
CAATGGGGTCATGGCCAAGATAAACAATTGGAGTCCTAACACGTGGGATG
GTAATGCAGGGGCACGCTATCAGGTTGGATCTTTCGAAGTTCCTTGGGGC
CGAGCGCCTTCGTATTTTATCGGAATCCTGACTGCCTACATCTGGTACGA
GAAGAAGCAGCACTTTCCCACCTATAAAGTCGGAGCCGGTGTCTGGACGG
GGATCGTCGGTGCAGTTTTAGCTCTGCTCCTCGCTATTATGTACGGGCCC
GTCACGGGCTCTGCTGGCGTCACACCTTGCATTCTAGTCACTGAAGACTG
CGGCTCTAGTTGGAGCACAACTATCAAAGTGCTAATCGCCTCCTGCGCCC
GCCCAGCCTGGGCCATAGGAGTTGCAGCTGTGAGTCTTCTCTGTTTCAAC
GGTCAGGGCTTCTGGGTGAATTCGCTGTTGTCTGCGCCAATTATGGCACC
ATTTTCCTTTCTCTCCTATACAGTCTATCTAGTGCACTATACGGTTCTGA
ACTTCTACATGGCCTCACTCACGGGGCGCATTCGATGGGACTTTTTTGAG
TTCGTGGTGACATACCTGGGATTGACAATGTTTAGCCACTGTTTAGCCTT
GTTTGTGGCACTTTTAGTAGAGAAACCAGCTATCAAACTGCAGAAGCTTT
ATTTGGATAAGCCCACAGCAAAGATGGGCGGAAATAATATCGGTGGAAAC
GAAAAAATTGTCGCCGACGGTTCGATTATCAAACCTTCCCGCGTGATTGA
GCTGCCCAATGCGAAATACCTGGACAAGAATTGAAAGCTGGCATGCTGGA
ACAATGGACGGAGAGATTTATGTGTAGCTGTATATGTGCATGTGTCTGTG
AAGCAGAAATACCCTGATAATTGAGCAGTGGGTTAGAGTTAGAGTAGGAA
GATGAAGGGAAAGGAGAGCCGAAGGCACGATGAGCAATTGCACCATTCAT
TAATTGCAAGAATGTGCATCCATGAAAGAAATTAGAAAGATACAGGCGCA
TATGAAGTGTGAGACATACGGTGAAAAAAATACGCGCTTAGTTGCTGACT
TTGGCCTTTCATTGTGTACTCTGTATTTGTAGCCACTTAATTTAACAGCC
TTGATTTCTCATGAGAATAAGCAATTAAAACAAAAAGCGCAAAAG

protein sequence of NO14G00240.1

>NO14G00240.1-protein ID=NO14G00240.1-protein|Name=NO14G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=759bp
MRFSQTLALSAAAVVVVCVAGAEPQTFTLEDCKSALSSLKEKPYSSSLPS
MAASTGKFPLAYSFQNSIAPVFAVKAFGAFDMCQAPSLYSWNALQTHFCT
LGQDKTGICMPEACSEEVLRSQVGNKEFVGFLATLAINVTMAMTPACAFD
PLLTPHCAENLAGRDYFEQIYNDWLIFSGQGITCGAGYTPMTAGARRMIA
LCIILGLLIFAGTAWGFMYQRSLRKVAEESAGVGEEEEHKTLPDGSPRLP
QVGVPPRERAVARPVPAFFKAFDLRDNLKEIFALNARPGEFSCFDGMRAI
SCGWVVIYHVILWQTRFIMNPEALLPPTGILAHWWAMPLFNFSGTLCVDT
FLFMSAFLATFLLLKKMEKETRPLKRWLPHAYLSRFVRITPAYMFALFFN
WKMAPLFSFGPLSKSLWANNSIKCPEQWWRHLLFINTVSPWRQSERNPQC
FGHTWYLGDDMMYFMTVPWLVLLYSQGGSKKKLSIILALSVVLGCMAYNG
VMAKINNWSPNTWDGNAGARYQVGSFEVPWGRAPSYFIGILTAYIWYEKK
QHFPTYKVGAGVWTGIVGAVLALLLAIMYGPVTGSAGVTPCILVTEDCGS
SWSTTIKVLIASCARPAWAIGVAAVSLLCFNGQGFWVNSLLSAPIMAPFS
FLSYTVYLVHYTVLNFYMASLTGRIRWDFFEFVVTYLGLTMFSHCLALFV
ALLVEKPAIKLQKLYLDKPTAKMGGNNIGGNEKIVADGSIIKPSRVIELP
NAKYLDKN*

mRNA from alignment at chr14:83335..88538-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO14G00240.1 ID=NO14G00240.1|Name=NO14G00240.1|organism=Nannochloropsis oceanica|type=mRNA|length=5204bp|location=Sequence derived from alignment at chr14:83335..88538- (Nannochloropsis oceanica)
CACATAGCTTCTATATCTCGCGCTCAGTCCTTTTGTCGGCCGACACCGAG
GGCAGCTATGAGGTTCTCTCAGACGCTTGCACTCTCTGCCGCTGCGGTGG
TCGTGGTGTGTGTCGCTGGGGCGGAACCCCAAACATTCACCTTGGAGGAC
TGCAAGTCTGCGCTGAGCTCCCTTAAAGAGAAGCCTTACAGCTCGTCTTT
GCCCAGCATGGCCGCTTCGACAGGTACGTTATGTCTGCGGAAGAAAAAGG
GGGGAGGGGACGTCCAGTGAAGGTGAATGAGTTTGTAGGATGTCCATGAA
GGTTGATGTGCTTGCTGCCCTTGGCTGGACTTATCCTACTTGCAATAAAG
CCGTTGATACGTGTCCGACTATTGCCATTTGTCAGATCATGGGAAGGGGA
GGAAGGGAGGGAGGAGCGTAAGTGCGGGCAGAAAGCCTCCTCCTGTGGTT
CAACTGCTTTCAATCAACTATTATTGGAACTCTTTTTATGCAATTTTCTC
GTGTCGCAAAAATGTGATCATTCCCAGCAGTCAGGAAGCTTGTCTTACCG
CCTCCGGCCTCCTCTCATTTACCCCTCCTTCGTCCCTTCCTCCCCTCCCG
CCCCCTCCTTATTCTCAGGCAAATTTCCCCTTGCTTACTCGTTCCAAAAT
TCCATCGCCCCCGTATTTGCCGTCAAGGCCTTTGGTGCCTTCGACATGTG
CCAGGCTCCGTCCCTGTATTCGTGGAACGCCTTGCAGACCCACTTTTGCA
CGCTGGGCCAAGACGTACGTGCGGGAGCGGAGAGAGGGGGGGAGGGGGAG
GGAAAGAGGGAGGGAGGAAAAAGCGGAAATTATCTCAGATCCGGAAGGCG
GGAGAGTCATTTTTCTTGCCATTCCCTTACACGTCGTCTCTTGGTCCTTT
GAATCAACGTAGAAAACTGGCATCTGCATGCCCGAAGCCTGCTCGGAAGA
AGTGCTCCGATCCCAGGTATGACCTCCCTACCTCCCTCCCTTCCTCCCTC
CCTCCCTCCCTCCCTCCCCCTCTTTTCCTTCGCTGAATCATTCCTCTGTC
CGTCTTTTTCCCTCCCTGCAGGTGGGTAACAAGGAGTTTGTGGGCTTCCT
GGCTACGCTGGCCATTAATGTCACGATGGCCATGACGCCTGCCTGTGCGT
TTGACCCTCTCCTCACCCCGCACTGCGCCGAGAATCTGGCTGGGCGAGGT
AGGGAGGGAGGGAGGGAGGGACGGACGGACGGAGGGGTAGGGGTAGGGAC
GACTGACACACTCATTTCGTCTTTGCTTTCCCCCTTCACTACATGGACAG
ATTACTTCGAGCAAATCTACAACGACTGGCTTATCTTCAGTGGGCAGGTA
CAGGGGGGGCAAGGGAGGAAGGGAGAAAGGGAGGAGGACGGGGAAGGTGG
GGAAGCACAAAGTGATAAACCTCTTCCTTCCTCCCTCCCTCTACTGTTTG
AGCAGCATCAAGAAGGCAAGCGGCATATTTCCAAGCGCAGAAGCCAATTA
TTGTTCCATGAGTCACCCTCCCTTCCTCCCTTCCTCCCTTCCTTCCTCCC
TCCCTCCCTCCCTCCCTGCCTGCCTAGGGAATCACCTGCGGAGCTGGTTA
CACGCCCATGACCGCGGGCGCCAGGCGAATGATTGCCCTATGCATCATAT
TGGGTCTCCTCATATTTGCAGGCACGGCCTGGGGATTCATGTACCAGCGA
TCGTTACGGAAAGTGGCAGAAGAGAGCGCGGGGGTGGGGGAGGAGGAGGA
GGTAGGAGGGAGGGAAAGAGGGAGGGAGGGAAAGAGGGAGAGAGGATGAT
GAAAATGCATACATGCAACAACAAACACCAATTCTAAACGTACCTTTCCC
TCCTTTCTTGTCTTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCATCGTA
GCATAAAACACTCCCTGACGGATCTCCACGCTTGCCGCAAGTGGGTGTGC
CTCCGCGTGAGAGAGCCGTGGCACGGCCAGTGCCTGCGTTTTTCAAGGCC
TTTGATCTGCGCGACAATTTGAAGGAAATCTTTGCACTGAACGCCCGCCC
GGGGTAAGGAGGGATAGCAGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGAGACCATGTC
CGGTCACATCGACTCACCGTCTTTCCCCTCCCTCCCTCCTTGCGCCCCGT
CCCTCCCTCCCTCCCTCCCTATCCCCCTACTTATCTCTTCCTCTCCCAGG
GAGTTTTCTTGTTTTGATGGGATGCGGGCCATATCGTGTGGGTGGGTCGT
AATCTATCACGTCATTCTATGGCAAACCCGCTTCATTATGAACCCTGAGG
TGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAAGGTGGAGAA
AGAGAGAGAAAGGCATAGAGAGAGGGAAGGGGGGGGGGGAGGGGGTAGAG
GGAGTTATTGATCGATTCGCACTTGCCTAAAGTGTGTAGGCTACCATGAC
TCATCTCCCGAAACCTCCCTCCCTCCCTCCCTCCCTCAGGCCCTCCTGCC
CCCCACGGGCATTCTGGCCCATTGGTGGGCGATGCCTCTCTTCAACTTCT
CAGGGACTCTGTGCGTGGACACTTTCCTCTTCATGTCCGCCTTTCTGGCT
ACCTTTTTGCTGCTCAAGAAGATGGAGAAAGGTACGTCGGTCATTCCCTC
CCTCCCTCCCTCCCTTTCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCC
TTCCTGTATCTTTGGTCATGTTTTCGATGCTTTAAGCGGTATTCCTTTCC
TTTCTTTCTTTCCACCACGACGTCTTCCCACCCTCCCTCACTCCTCTTGT
CAGCCTTCTCTTGTCAACGCCGTCTGACACTTTTTGTCCTTACTCCGCCC
TCCCTCCCCTCTTCTCTCCTTTCCTTCCCTTCCCCCTCCATTGTCTCATC
ACACAGAGACGCGGCCCCTCAAACGCTGGTTGCCCCACGCGTATCTCTCC
CGTTTTGTCCGCATCACACCTGGTGAGGAGGAGGGATGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGGAGGAGGGAAGGGAAGAAAAAACTTTGAT
CACGGGGGACCCGCTGACCTCTCTTCTTTATTTTTTCCCACTCGTACCTT
CTCTTGCCCTCCTCCTATAGCCTACATGTTCGCGCTCTTTTTTAACTGGA
AGATGGCACCGCTCTTCTCCTTTGGTATGTGCCCGGTTCGGGAGCGAGGA
AGGAAGGAAGCAAGGAAGGAAGCAAGGAAGGAAGGAAAAGAGACGATAGT
GGGGGAAGTTCGATGAAATTATAGAGGTTTATGACGTTCATTTGTCTCAC
GCCCCTGCCTATCTCCCTCTCTCATTTAACCGTTTATTTCAGGTCCTTTG
TCCAAGTCGCTGTGGGCAAACAACTCAATCAAATGTCCAGAGCAGTGGTG
GCGCCACCTTCTCTTCATCAATACCGTCTCGCCCTGGAGGCAATCGGAGG
TACACAGGGAAGGGTAGAGATGAGAATTACAAGGACTCGGAATGTATGTA
ATATACATTAGATATATATTTTTTTCTCCAGTCTTTGTACCGCCATTTTT
TATCTCTTTTATCTCCTTCCTTCCCTTGTTTGTAGCGCAACCCGCAGTGC
TTTGGCCACACGTGGTATCTGGGGGACGACATGATGTACTTCATGACTGT
GCCTTGGCTCGTATTGCTTTACAGCCAGGGAGGGTCTAAGAAGAAACTCA
GCATCATCCTGGCTTTGAGCGTCGTCTTAGGGTGCATGGCATACAATGGG
TGAGTGAAGGGGAAGGGGGAGGGAGAAGGGTCGGGGGGGAGAGAGAGATG
GAGGAGAAGGAGGTATCGGAGACTCGTGCTTTGTCTCTGAGACTTATGTT
TTCATGCCTATTAGGGTCATGGCCAAGATAAACAATTGGAGTCCTAACAC
GTGGGATGGTAATGCAGGGGCACGCTATCAGGTATGTCTGATGTGACATC
CAAAGTTTCTCACAACTTTTTACTAAAGGCTATCCCTCAGTACCTCTGTC
TTATCTCTTTCTACTTCTCTGGGTGTTTTGCGCGCTGAACACACCAATAA
CATACGTGTGTACAAACACATTACTCTCATAGGTTGGATCTTTCGAAGTT
CCTTGGGGCCGAGCGCCTTCGTATTTTATCGGAATCCTGACTGCCTACAT
CTGGTACGAGAAGAAGCAGCACTTTCCCACCTATAAAGTCGGAGCCGGTG
TCTGGACGGGGATCGTCGGTGCAGTTTTAGCTCTGCTCCTCGCTATTATG
TACGGGCCCGTCACGGGCTCTGCTGGCGTCACACCTTGCATTCTAGTCAC
TGAAGACTGCGGCTCTAGTTGGAGCACAACTATCAAAGTGCTAATCGCCT
CCTGCGCCCGCCCAGCCTGGGCCATAGGAGTTGCAGCTGTGAGTCTTCTC
TGTTTCAACGGTCAGGGCTTCTGGGTGAATTCGCTGTTGTCTGCGCCAAT
TATGGCACCATTTTCCTTTCTCTCCTATACAGTCTATCTAGTGCACTATA
CGGTTCTGAACTTCTACATGGCCTCACTCACGGGGCGCATTCGATGGGAC
TTTTTTGAGTTCGTGGTGACATACCTGGGATTGACAATGTTTAGCCACTG
TTTAGCCTTGTTTGTGGCACTTTTAGTAGAGAAACCAGCTATCAAACTGC
AGAAGCTTTATTTGGATAAGCCCACAGCAAAGATGGGCGGAAATAATATC
GGTGGAAACGAAAAAATTGTCGCCGACGGTTCGATTATCAAACCTTCCCG
CGTGATTGAGCTGCCCAATGCGAAATACCTGGACAAGAATTGAAAGCTGG
CATGCTGGAACAATGGACGGAGAGATTTATGTGTAGCTGTATATGTGCAT
GTGTCTGTGAAGCAGAAATACCCTGATAATTGAGCAGTGGGTTAGAGTTA
GAGTAGGAAGATGAAGGGAAAGGAGAGCCGAAGGCACGATGAGCAATTGC
ACCATTCATTAATTGCAAGAATGTGCATCCATGAAAGAAATTAGAAAGAT
ACAGGCGCATATGAAGTGTGAGACATACGGTGAAAAAAATACGCGCTTAG
TTGCTGACTTTGGCCTTTCATTGTGTACTCTGTATTTGTAGCCACTTAAT
TTAACAGCCTTGATTTCTCATGAGAATAAGCAATTAAAACAAAAAGCGCA
AAAG

Coding sequence (CDS) from alignment at chr14:83335..88538-

>NO14G00240.1 ID=NO14G00240.1|Name=NO14G00240.1|organism=Nannochloropsis oceanica|type=CDS|length=2277bp|location=Sequence derived from alignment at chr14:83335..88538- (Nannochloropsis oceanica)
ATGAGGTTCTCTCAGACGCTTGCACTCTCTGCCGCTGCGGTGGTCGTGGT
GTGTGTCGCTGGGGCGGAACCCCAAACATTCACCTTGGAGGACTGCAAGT
CTGCGCTGAGCTCCCTTAAAGAGAAGCCTTACAGCTCGTCTTTGCCCAGC
ATGGCCGCTTCGACAGGCAAATTTCCCCTTGCTTACTCGTTCCAAAATTC
CATCGCCCCCGTATTTGCCGTCAAGGCCTTTGGTGCCTTCGACATGTGCC
AGGCTCCGTCCCTGTATTCGTGGAACGCCTTGCAGACCCACTTTTGCACG
CTGGGCCAAGACAAAACTGGCATCTGCATGCCCGAAGCCTGCTCGGAAGA
AGTGCTCCGATCCCAGGTGGGTAACAAGGAGTTTGTGGGCTTCCTGGCTA
CGCTGGCCATTAATGTCACGATGGCCATGACGCCTGCCTGTGCGTTTGAC
CCTCTCCTCACCCCGCACTGCGCCGAGAATCTGGCTGGGCGAGATTACTT
CGAGCAAATCTACAACGACTGGCTTATCTTCAGTGGGCAGGGAATCACCT
GCGGAGCTGGTTACACGCCCATGACCGCGGGCGCCAGGCGAATGATTGCC
CTATGCATCATATTGGGTCTCCTCATATTTGCAGGCACGGCCTGGGGATT
CATGTACCAGCGATCGTTACGGAAAGTGGCAGAAGAGAGCGCGGGGGTGG
GGGAGGAGGAGGAGCATAAAACACTCCCTGACGGATCTCCACGCTTGCCG
CAAGTGGGTGTGCCTCCGCGTGAGAGAGCCGTGGCACGGCCAGTGCCTGC
GTTTTTCAAGGCCTTTGATCTGCGCGACAATTTGAAGGAAATCTTTGCAC
TGAACGCCCGCCCGGGGGAGTTTTCTTGTTTTGATGGGATGCGGGCCATA
TCGTGTGGGTGGGTCGTAATCTATCACGTCATTCTATGGCAAACCCGCTT
CATTATGAACCCTGAGGCCCTCCTGCCCCCCACGGGCATTCTGGCCCATT
GGTGGGCGATGCCTCTCTTCAACTTCTCAGGGACTCTGTGCGTGGACACT
TTCCTCTTCATGTCCGCCTTTCTGGCTACCTTTTTGCTGCTCAAGAAGAT
GGAGAAAGAGACGCGGCCCCTCAAACGCTGGTTGCCCCACGCGTATCTCT
CCCGTTTTGTCCGCATCACACCTGCCTACATGTTCGCGCTCTTTTTTAAC
TGGAAGATGGCACCGCTCTTCTCCTTTGGTCCTTTGTCCAAGTCGCTGTG
GGCAAACAACTCAATCAAATGTCCAGAGCAGTGGTGGCGCCACCTTCTCT
TCATCAATACCGTCTCGCCCTGGAGGCAATCGGAGCGCAACCCGCAGTGC
TTTGGCCACACGTGGTATCTGGGGGACGACATGATGTACTTCATGACTGT
GCCTTGGCTCGTATTGCTTTACAGCCAGGGAGGGTCTAAGAAGAAACTCA
GCATCATCCTGGCTTTGAGCGTCGTCTTAGGGTGCATGGCATACAATGGG
GTCATGGCCAAGATAAACAATTGGAGTCCTAACACGTGGGATGGTAATGC
AGGGGCACGCTATCAGGTTGGATCTTTCGAAGTTCCTTGGGGCCGAGCGC
CTTCGTATTTTATCGGAATCCTGACTGCCTACATCTGGTACGAGAAGAAG
CAGCACTTTCCCACCTATAAAGTCGGAGCCGGTGTCTGGACGGGGATCGT
CGGTGCAGTTTTAGCTCTGCTCCTCGCTATTATGTACGGGCCCGTCACGG
GCTCTGCTGGCGTCACACCTTGCATTCTAGTCACTGAAGACTGCGGCTCT
AGTTGGAGCACAACTATCAAAGTGCTAATCGCCTCCTGCGCCCGCCCAGC
CTGGGCCATAGGAGTTGCAGCTGTGAGTCTTCTCTGTTTCAACGGTCAGG
GCTTCTGGGTGAATTCGCTGTTGTCTGCGCCAATTATGGCACCATTTTCC
TTTCTCTCCTATACAGTCTATCTAGTGCACTATACGGTTCTGAACTTCTA
CATGGCCTCACTCACGGGGCGCATTCGATGGGACTTTTTTGAGTTCGTGG
TGACATACCTGGGATTGACAATGTTTAGCCACTGTTTAGCCTTGTTTGTG
GCACTTTTAGTAGAGAAACCAGCTATCAAACTGCAGAAGCTTTATTTGGA
TAAGCCCACAGCAAAGATGGGCGGAAATAATATCGGTGGAAACGAAAAAA
TTGTCGCCGACGGTTCGATTATCAAACCTTCCCGCGTGATTGAGCTGCCC
AATGCGAAATACCTGGACAAGAATTGA

Synonyms

Publications