NO14G00160.1, NO14G00160.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO14G00160.1
Unique Name	NO14G00160.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3000
Alignment location	chr14:57163..63600 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr14	genome	chr14:57163..63600 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO14G00160.1 vs.
Match: EWM24781.1 (u4 u6 small nuclear ribonucleoprotein prp3, partial [Nannochloropsis gaditana])

HSP 1 Score: 377.1 bits (967), Expect = 1.600e-100
Identity = 205/241 (85.06%), Postives = 213/241 (88.38%), Query Frame = 0

Query:  618 GLMPPPEPKMNLSNFMKVLANESIADPSAVTAKIQAQIREREKNHEMRNMARKLTPEERREKKRRKIINDMKKQLEVALFRVRQLSSPKIRYKIDVNAQQSGLSGAVLSCRDPSFGEEGLHLVVVEGGPRSIRRFVKLMTRRIKWNAQDASKGGGMEGGEEGEESEEEEEEEGGAQGGGEGEGKCELVWRGVVAKPAFTGFKFQECRTLTTARKVFEVKGVVHYVDMTFQG---GGGGEGE 856
            GLMPPPEPKMNLSNFMKVLANESIADPSAVTAKIQAQIREREKNHEMRN+ARKLTPEERREKKRRKIINDMKKQ+EVALFRVRQL SPKIRYKIDVNAQQSGLSGAVL+CRDP+FGEEG+HLVVVEGGPRS+RRFVKLMTRRIKW AQ    GGG EG  E EE EEEEEE+GG   G  G G CELVWRGVVAKP+F GFKFQECRTLTTARKVFE KGV HY DM FQ    GGG EGE
Sbjct:    2 GLMPPPEPKMNLSNFMKVLANESIADPSAVTAKIQAQIREREKNHEMRNLARKLTPEERREKKRRKIINDMKKQIEVALFRVRQLHSPKIRYKIDVNAQQSGLSGAVLTCRDPAFGEEGMHLVVVEGGPRSVRRFVKLMTRRIKWRAQQEG-GGGQEGEGEEEEEEEEEEEDGGEDLGERGGGICELVWRGVVAKPSFAGFKFQECRTLTTARKVFEGKGVAHYADMCFQNVDVGGGKEGE 241

The following BLAST results are available for this feature:

BLAST of NO14G00160.1 vs.

BLAST of NO14G00160.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24781.1	1.600e-100	85.06	u4 u6 small nuclear ribonucleoprotein prp3, partia...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO14G00160	NO14G00160	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO14G00160.1	NO14G00160.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO14G00160.1.cds1	NO14G00160.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds2	NO14G00160.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds3	NO14G00160.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds4	NO14G00160.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds5	NO14G00160.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds6	NO14G00160.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds7	NO14G00160.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds8	NO14G00160.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds9	NO14G00160.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds10	NO14G00160.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds11	NO14G00160.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds12	NO14G00160.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds13	NO14G00160.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds14	NO14G00160.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds15	NO14G00160.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds16	NO14G00160.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds17	NO14G00160.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G00160.1.cds18	NO14G00160.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr14:57163..63600+
coding sequence from alignment at chr14:57163..63600+

mRNA sequence

>NO14G00160.1 ID=NO14G00160.1|Name=NO14G00160.1|organism=Nannochloropsis oceanica|type=mRNA|length=3000bp
GGCTTCTGCCCCACCCCTATCCCATCCACCACACACAGCATCACCACCAT
ATTCTCTCTACCGCTCTGGAAACACATGTCTTATTAATGTGCCGGGTTCG
TGCGGCCTCCCGCTGCTTGCGTTTTTTTAATTCCTTTCGCGTCCGCTAAC
CACAGGGGACAAAGCAACCGCCTACACTAAAAGCCTTCACACGCGGGTTT
TTGGGGAAGCCTATGGCACGCTCCGATGACGAGAACGGGGGGAGAAGTAG
CAGGAGCAGCAGACATAGAAGAGAAGGAGGAGAAGGAGGAGAAGGAGGAG
GTGGAGACAGTGGAAGGAAGAAGCGTCGCCGCAGTCCAAGCCCAGATGTG
CGTCGCCGGTCCGTTTCCAGGTCTCGTTCACGCTCTCGAGAGCGAGAGAG
TCGCAGCGGCCGGCGGCCCATGACGAGGAGTGCCAGTCGGGAGACTCGGG
GCGGCTCGAGGCGTTCGCCCACGGGTTCTTCCCCCTCCCCTCCGCCTTCC
CGCACACGCACCACCCGCAGCAGCAGCAGGAGCCGCAGGCCCGTCAGCCC
TTCCTCCTCCCCTTCTTCCCTTGAACCCGACACACGGCGGAGAGAGAAGA
AGACGACGACAAGTACGAGCAGCAGCAATGGCAGGCGGAGGGGCAAGTCC
CCATCGCCGATTCCGGAAGACCGGCCTGTGGACCGCACCAGTAGCAAGAG
CAGCGGACACAGCAGCAGGAGCAGCAGCCGGAGGAGGGATGGCGAGAGGA
AGGAAGAGAAGGAGAAGATAAGAGAAAGAGTAAAAAGGAAAGAGAAGGAG
GGAGGGAGCAGCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCGCGCAAGAA
GGGAAGATTTGCAGCGGCCGATGACCCGACGCCGGCACCATCCGCCGCGG
ATGCGGCCGCGCTAGTCATGGCCAGGGCCCAAGAGCTGACCCGGAAGATC
AAAGCAAGCGAGGCAACAGCTGCCCGCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCTCCCACCCTTACTTCTCCCCTTCCACTTGCCCCCTCCGTAGGGG
GGGCTTCTGGCGGAGGAGGAGGAGGAGCAGGAGATGTGGAGGCCCAGCAA
GCGGCGGCACTGCAGGAGAAGATCCGGAAGCAGATGGAGAACATGCAGGC
CTCGCTCGCTCTGGCCAAAGCGAAAGCAGCAGCCGCCGCGCTTCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCCGGGAGGAGGGGAAGGGGAGGAGGAG
AAGAAACCGTTGTTCCGGCCGATGCGACTTGATGCACAGGGCCGCGAAAT
CGACGAGGAAGGGAATCTGATCAAGATCGATTTGGCCGCCACCCGATCCG
TCAAAGCCAACCTTCCGGGGGGGGGCAAGAAGCGCGATGGCGACGGCGTG
GGGAAGAAAAAAGAACCCGAGGCTGCAGGAGCAGCGGCTGCCGGCGCGGG
AAGGAGGGAAAGGGGGGAGGGAGGGAGGGAGGAGGAGGAGGAGGGGCTGG
CGTCATTTGTGGACCCCCGGTTGAAAGTCAAGGACCGATCGCGGCGGTCT
CACCGCGGGCTGGCGTTTGCAGAGGCCGGGACGTACGTGAGGATGGCGGA
GCGGCAGCGCTCCAAGGAGCACGGGGCGATGATGGGGGGATTTGCCTCTG
GTCGAAACCCGCGGGCCTACAGCAAGGGCATCCTGGATGTGGGCGAGGAA
GGCGCCGCCCCTGGCCCTCCCTCCTCCTCGTCCTCCCTCCTTCAGTCTCT
GGTGCCGCTCCCTCCCGATGACGTCCTCTCCCCCTCCCAGCCCGTCGTGG
AGTGGTGGGACCTGCCCCTCCTACCGCGGACTCAGCGGGCGGCACTGGCC
AGGGACCCCGCAGCCTACGCAATGGCCAGCTTAGAGAACAGCAAGACCTA
CACCTACATCCAACACCCCGTGCCCCTCAAAGGCATCTACGCAGGCAAGG
ACGAGGAGAGCGGCCTCGTCCTCCCCACCTTCCTGACGAAAAAGGAGAGG
AAGCGACTGCGGCGCCAAGCGAGGAAGGAGCGGGAGCAAGAGAAGAGGGA
CAAGATCGCTCTGGGCCTGATGCCGCCCCCCGAGCCCAAGATGAACCTCT
CGAATTTCATGAAAGTGCTCGCCAACGAGTCCATCGCCGACCCTTCAGCA
GTGACTGCGAAAATCCAGGCTCAGATCCGAGAGCGGGAGAAGAATCACGA
GATGCGGAATATGGCCCGCAAGCTCACCCCGGAAGAGCGTCGGGAGAAGA
AGCGGCGAAAGATCATCAACGACATGAAGAAGCAGCTCGAGGTAGCCCTT
TTCCGGGTCCGGCAGTTGAGCTCCCCCAAGATCCGTTACAAGATCGACGT
GAACGCGCAGCAGTCCGGCTTGTCAGGTGCGGTACTGAGTTGCCGCGATC
CCTCATTTGGGGAGGAAGGACTGCACCTGGTGGTGGTGGAGGGGGGACCT
CGCTCCATCCGTCGGTTCGTGAAGCTGATGACCCGGAGGATAAAGTGGAA
CGCCCAGGACGCCTCGAAGGGGGGAGGGATGGAGGGAGGGGAAGAAGGGG
AGGAGAGTGAGGAGGAGGAAGAGGAGGAGGGAGGGGCCCAAGGAGGAGGG
GAAGGGGAAGGGAAGTGTGAGCTGGTGTGGCGGGGGGTGGTGGCCAAGCC
GGCGTTTACGGGCTTCAAGTTCCAGGAGTGCCGCACCCTGACCACAGCCC
GGAAGGTGTTCGAAGTCAAGGGCGTCGTGCACTACGTCGACATGACCTTC
CAGGGCGGCGGGGGGGGGGAGGGGGAGGACAGGATGACGGGGACGAGGAC
GGGAAAAGGTAGAGGAGGAGGGGGCGGGGAAGGATGCGGCAACGTATGTG
GAGATGAGACCTTTTGGGATCCCTCAGTAATGATAAAGAGAGGCCGAAGG
AAGAAGAGAGAGACAGATATCCTTGCCCACACCAAAAGAATAGAAGGAGA
CTTACATCGTGTGTTCTATCGGGGGGGTGGAGCTTGAGGGGGGAAAACAG

protein sequence of NO14G00160.1

>NO14G00160.1-protein ID=NO14G00160.1-protein|Name=NO14G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=925bp
MARSDDENGGRSSRSSRHRREGGEGGEGGGGDSGRKKRRRSPSPDVRRRS
VSRSRSRSRERESRSGRRPMTRSASRETRGGSRRSPTGSSPSPPPSRTRT
TRSSSRSRRPVSPSSSPSSLEPDTRRREKKTTTSTSSSNGRRRGKSPSPI
PEDRPVDRTSSKSSGHSSRSSSRRRDGERKEEKEKIRERVKRKEKEGGSS
SSSSSSSSSSRKKGRFAAADDPTPAPSAADAAALVMARAQELTRKIKASE
ATAARPPSLPPSLPPPTLTSPLPLAPSVGGASGGGGGGAGDVEAQQAAAL
QEKIRKQMENMQASLALAKAKAAAAALQQQQQQQQQQPGGGEGEEEKKPL
FRPMRLDAQGREIDEEGNLIKIDLAATRSVKANLPGGGKKRDGDGVGKKK
EPEAAGAAAAGAGRRERGEGGREEEEEGLASFVDPRLKVKDRSRRSHRGL
AFAEAGTYVRMAERQRSKEHGAMMGGFASGRNPRAYSKGILDVGEEGAAP
GPPSSSSSLLQSLVPLPPDDVLSPSQPVVEWWDLPLLPRTQRAALARDPA
AYAMASLENSKTYTYIQHPVPLKGIYAGKDEESGLVLPTFLTKKERKRLR
RQARKEREQEKRDKIALGLMPPPEPKMNLSNFMKVLANESIADPSAVTAK
IQAQIREREKNHEMRNMARKLTPEERREKKRRKIINDMKKQLEVALFRVR
QLSSPKIRYKIDVNAQQSGLSGAVLSCRDPSFGEEGLHLVVVEGGPRSIR
RFVKLMTRRIKWNAQDASKGGGMEGGEEGEESEEEEEEEGGAQGGGEGEG
KCELVWRGVVAKPAFTGFKFQECRTLTTARKVFEVKGVVHYVDMTFQGGG
GGEGEDRMTGTRTGKGRGGGGGEGCGNVCGDETFWDPSVMIKRGRRKKRE
TDILAHTKRIEGDLHRVFYRGGGA*

mRNA from alignment at chr14:57163..63600+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO14G00160.1 ID=NO14G00160.1|Name=NO14G00160.1|organism=Nannochloropsis oceanica|type=mRNA|length=6438bp|location=Sequence derived from alignment at chr14:57163..63600+ (Nannochloropsis oceanica)
GGCTTCTGCCCCACCCCTATCCCATCCACCACACACAGCATCACCACCAT
ATTCTCTCTACCGCTCTGGAAACACATGTCTTATTAATGTGCCGGGTTCG
TGCGGCCTCCCGCTGCTTGCGTTTTTTTAATTCCTTTCGCGTCCGCTAAC
CACAGGGGACAAAGCAACCGCCTACACTAAAAGCCTTCACACGCGGGTTT
TTGGGGAAGCCTATGGCACGCTCCGATGACGAGAACGGGGGGAGAAGTAG
CAGGAGCAGCAGACATAGAAGAGAAGGAGGAGAAGGAGGAGAAGGAGGAG
GTGGAGACAGTGGAAGGAAGAAGCGTCGCCGCAGTCCAAGCCCAGATGTG
CGTCGCCGGTCCGTTTCCAGGTCTCGTTCACGCTCTCGAGGTAAGGCTAA
GGTCGGAGACCGACGTAGGGGGGAGAGTAATAATTGAGAAGGTGCTGCGA
CAGCGTTGTGCCTTGTTCCAGCTCTCTCTGTGCTTGTTGGGTGTAAGTTG
TGCCGTCGAAGACCTTTCCCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCT
CCACCCCACCTGCAAGCACTCAAAGGCACGCCTTAAATTTTCCGGGCATT
TGTCCGAAATCGCCTTCATGATACCCCCAACGGTCTCGTCTTCGACGTCG
TCCTCATCCAATTGCCCATTGCCCACACCCACAGGCCGATATCCATTGAC
CCTCCCTTCGTCCCCCCTACCCCTCCCTGCCTCTCGCCCTCACATCCTCT
TAATTTCACTCAAACACGCATACACACACAGAGCGAGAGAGTCGCAGCGG
CCGGCGGCCCATGACGAGGAGTGCCAGTCGGGAGACTCGGGGCGGCTCGA
GGTGGGAGGGAGAGAGGGAGGGAGGGACGGAGTGAAGATAACATCTTTCC
GTGTCGGACATTCCTCCCTGTATTATAGGTGCCTGCTGCCTGCTTTGAGG
TTCTAAACTGACTCTTGGCCAATTTCTTCCCTCCCTCCCTCTCTCCCTCC
CTCCCTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCTGCAGGCGTTCGCCCACGGGTTCTTCCCCCTCCCCTCCGCC
TTCCCGCACACGCACCACCCGCAGCAGCAGCAGGAGCCGCAGGCCCGTCA
GCCCTTCCTCCTCCCCTTCTTCCCTTGAACCCGACACACGGCGGAGAGAG
AAGAAGACGACGACAAGTACGAGCAGCAGCAATGGCAGGCGGAGGGGCAA
GTCCCCATCGCCGATTCCGGAAGGTGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGATCAAGGGATGTGATTGAAAGAGCACTCAAACCTGACACAAA
CTCCTCTCTTGTTCTCCTTCATCTCCGTCTCCTTCACCTCCTTCTCCTTG
TTGACTTTTCCACCGCCTTCTCCTTTTAGACCGGCCTGTGGACCGCACCA
GTAGCAAGAGCAGCGGACACAGCAGCAGGAGCAGCAGCCGGAGGAGGGAT
GGCGAGAGGAAGGAAGAGAAGGAGAAGATAAGAGAAAGAGTAAAAAGGAA
AGAGAAGGAGGGAGGGAGCAGCTCCTCCTCCTCCTCCTCTTCCTCCTCCT
CGCGCAAGAAGGGAAGATTTGCAGCGGCCGATGACCCGACGCCGGCACCA
TCCGCCGCGGGTAGGGAGGGAGGGAGGGAAGGAGAGAGGGAAGTAGGGGA
GGGACTCCAAGATATTTTCAAATTTGATAACCTCTCTGGCAATCTTTTTT
TATGTGCATCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGATGCGGC
CGCGCTAGTCATGGCCAGGGCCCAAGAGCTGACCCGGAAGATCAAAGCAA
GCGAGGCAACAGCTGCCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCT
CCCACCCTTACTTCTCCCCTTCCACTTGCCCCCTCCGTAGGGGGGGCTTC
TGGCGGAGGAGGAGGAGGAGCAGGAGATGTGGAGGCCCAGCAAGCGGCGG
CACTGCAGGAGAAGGTAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGAAAG
GAAGGGAGGGAAGGAGGGAGGGAGGAAGGGAGGGAAGGAGGGAGGGAGGA
AGGGAGGTAAAGAGGGAAGGAGGGAAGGAGGGAGGCATGATCTGTCCTCC
ATTTTTGTAAACAGACGCTCATTTCTCCACCCTCGCTCCCTCCTTCCCTC
CCTTCCTCCCTCCCTCCCTCCCTGCAGATCCGGAAGCAGATGGAGAACAT
GCAGGCCTCGCTCGCTCTGGCCAAAGCGAAAGCAGCAGCCGCCGCGCTTC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGGGAGGAGGGGAAGGGGAG
GAGGAGAAGAAACCGTTGTTCCGGCCGATGCGACTTGATGCACAGGTAGG
AGGGGAGGAAGGGACGGAAGTGATGGAAGGGAAGGAGAGGGAGGGAGGGA
GGGAGGGGCTACGTGAGTGCTGGAGAAGCCAATTACTACCAATGAACAGA
ACTTAATCGTCGACATTCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCCAGGGCCGCGAAATCGACGAGGAAGGGAATCTGATCAAGATCGATT
TGGCCGCCACCCGATCCGTCAAAGCCAACCTTCCGGGGGGGGGCAAGAAG
GTAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAAGGAAGGAAGACTTGGGGTACGTAC
GCATGTGCACTGGCTTAGCTCGTCCTTACATTCTCGGTCTTCCTTCCTTT
GCCTCGCTTCCTCCCTTCCTTCCCTTCTTCTCAGCGCGATGGCGACGGCG
TGGGGAAGAAAAAAGAACCCGAGGCTGCAGGAGCAGCGGCTGCCGGCGCG
GGAAGGAGGGAAAGGGGGGAGGGAGGGAGGGAGGAGGAGGAGGAGGGGCT
GGCGTCATTTGTGGACCCCCGGTTGAAAGTCAAGGACCGATCGCGGCGGT
CTCACCGCGGGCTGGCGTTTGCAGAGGCCGGGACGTACGTGAGGATGGTA
AGTGTATAGGAGGGGGGCATGACCGTGCGGTTTCACCCTCTTTCTCTCCC
TTCTTCCCTCCCTCCCTCCCTCCATCCCTCCCTTCCTTTCCCCCTCGATC
GACCTCTTTTTAAAAAAAAACTTTTCGCGGAATTTTTTCATTTTCCTCTG
CCTGTGCCTCTTCGTTTTTCATCCCCTTTCCCTTGCCACCTCCTTCTTTT
TTTCCCTTTCTCTTCCTCCTCCTCTGGTCCTACTCTCTTCTCTCCCTCTC
TCCCGTCTCCCCATCCTCCCCTTGTCCGCTCTCGGCGCTTCCGCCTCAGG
CACCCGGCACCCACCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCAGGCGG
AGCGGCAGCGCTCCAAGGAGCACGGGGCGATGATGGGGGGATTTGCCTCT
GGTCGAAACCCGCGGGCCTACAGCAAGGGCATCCTGGATGTGGGCGAGGA
AGGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTTGTG
AAGAGCACTGGCACACACTGATGCTCACGGTTCCATTTCAACCCCTCCCT
TCCTCCCTCCCTCCCTCAGCGCCGCCCCTGGCCCTCCCTCCTCCTCGTCC
TCCCTCCTTCAGTCTCTGGTGCCGCTCCCTCCCGATGACGTCCTCTCCCC
CTCCCAGCCCGTCGTGGAGTGGTGGGACCTGCCCCTCCTACCGCGGACTC
AGCGGGCGGCACTGGCCAGGGTGAGAAAGGGAGGGAAGGAGGGAGGGAGG
GAGAGGAGTGTCGACCCTTCCTTACTTTCTGTGTCTCCTCTTTTCTTACA
TCCGTCTCTCCTCACCATCTGTCATTCCCCCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCCAGGACCCCGCAGCCTACGCAATGGCCAGCTTAGAGAACAG
CAAGACCTACACCTACATCCAACACCCCGTGCCCCTCAAAGGCACGTCCC
CTCCCTCCCTTCCTCCCTCCCTCCCATAGCCACAACCGCTTCCTAGACTC
TTACCCATCATCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTAGGCATCTACGCAGGCAAGGACGAGGAGAGCGGCCTCGTCCTCCCC
ACCTTCCTGACGAAAAAGGAGAGGAAGCGACTGCGGCGCCAAGCGAGGAA
GGAGCGGGAGCAAGAGAAGAGGGACAAGATCGCTCTGGGTGAGTGGAGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGGGAG
AGGGAGGAAGTATGTAGTCTTTTTCTCACGGACTCAGTCGTCCCTCCCTC
CCTCCCTCCCTCCATCCCTCCTTCCCTCCCTCCCTCGCTCTCGCCTGTGG
GAAGACCCACCTAACAGCTCCTCCCTTTCCCCTTTCCCCTTTCCCTCCCT
CCCTCCCTCCAGGCCTGATGCCGCCCCCCGAGCCCAAGATGAACCTCTCG
AATTTCATGAAAGTGCTCGCCAACGAGGTAGGGAAGGAGGGAGGGAGGGA
GGGAGGGAGGGGTTCTGGAGACTTCATTCTTTCCCATCATTGATCTGTCA
GTGAAATTCACACTCCCCTTTGCTCCCTCCTTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCTTTGCAGTCCATCGCCGACCCTTCAGCAGTGACTGCGAA
AATCCAGGCTCAGATCCGAGAGCGGGAGAAGAATCACGAGATGCGGAATA
TGGTAAAGGAGGGGGGGAGGGAGGGCGGGAGGGAGGAAAGGATATCTTGC
TTGTCTGATGGTCTCTTTCTCCGATTTTCATATCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCTTTCCCTCCTTTAGGCCCGCAAGCTCACCCC
GGAAGAGCGTCGGGAGAAGAAGCGGCGAAAGATCATCAACGACATGAAGA
AGCAGGTGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGACTCCATGTC
ACGTTAGAAGCCCGACAATGCCCGCCCAGCCCTCTTCCATTCTCTCTCGC
TTCCACTGACGTCCATCCCCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCTCTAGCTCGAGGTAGCCCTTTTCCGGGTCCGGCAGTTGAGCTCCCC
CAAGATCCGTTACAAGATCGACGTGAACGCGCAGCAGTCCGGCTTGTCAG
GTAGGGGCGGAGGGAGGGGCGGAGGGAGGGGCGGAGGGAGGGGCGGAGGG
AGGGGGGGAAGGAAGAAAGGATGTTGTTGGTGTGGATGTGCAGCAGTATG
GCTCGGTGGATAAGGAGGGAGGGAGGGAAGGGAGGAGGGGAGGAGGGAGG
GAAGGAGGGAGGGAAGGAGGGAGAAAGAGAGGGAGGGAGTGCGCGGGATA
AGAGAGGGACGAAATGCGGTGTTAGTCTCAGCCTCAATGTCAACCACACT
TCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCAGGTGCGGTA
CTGAGTTGCCGCGATCCCTCATTTGGGGAGGAAGGACTGCACCTGGTGGT
GGTGGAGGGGGGACCTCGCTCCATCCGTCGGTTCGTGAAGCTGATGACCC
GGAGGATAAAGTGGAACGCCCAGGACGCCTCGAAGGGGGGAGGGATGGAG
GGAGGGGAAGAAGGGGAGGAGAGTGAGGAGGAGGAAGAGGAGGAGGGAGG
GGCCCAAGGAGGAGGGGAAGGGGAAGGGAAGTGTGAGCTGGTGTGGCGGG
GGGTGGTGGCCAAGCCGGCGTTTACGGGCTTCAAGTTCCAGGTAGGGAGG
GAGGAAGGAAGGGAGGGAGGGAGGGAGACGAGGGGGCGGTATCTGTGTGT
GGCTCTATGTATCTTGCTTTTTGTCGTTATTGTTGTCATGGTCAATATAC
CGGTTGTAATCCGGTGGGTTAAAGAAACTCTTTTCTTTTCCCCACATTTC
CTCCCCGCCCTCCCTCTTCTGCCCTCTCTTCTTGTGGCGCGGCTCGCAGT
CTTTGTCTCCGCACGCCTGACGTCCCCCCCTCCCTTCCTCCCTCCCTCCC
TCCCTCTCCCCAGGAGTGCCGCACCCTGACCACAGCCCGGAAGGTGTTCG
AAGTCAAGGGCGTCGTGCACTACGTCGACATGACCTTCCAGGGCGGCGGG
GGGGGGGAGGGGGAGGACAGGATGACGGGGACGAGGACGGGAAAAGGTAG
AGGAGGAGGGGGCGGGGAAGGATGCGGCAACGTATGTGGAGATGAGACCT
TTTGGGATCCCTCAGTAATGATAAAGAGAGGCCGAAGGAAGAAGAGAGAG
ACAGATATCCTTGCCCACACCAAAAGAATAGAAGGAGACTTACATCGTGT
GTTCTATCGGGGGGGTGGAGCTTGAGGGGGGAAAACAG

Coding sequence (CDS) from alignment at chr14:57163..63600+

>NO14G00160.1 ID=NO14G00160.1|Name=NO14G00160.1|organism=Nannochloropsis oceanica|type=CDS|length=2775bp|location=Sequence derived from alignment at chr14:57163..63600+ (Nannochloropsis oceanica)
ATGGCACGCTCCGATGACGAGAACGGGGGGAGAAGTAGCAGGAGCAGCAG
ACATAGAAGAGAAGGAGGAGAAGGAGGAGAAGGAGGAGGTGGAGACAGTG
GAAGGAAGAAGCGTCGCCGCAGTCCAAGCCCAGATGTGCGTCGCCGGTCC
GTTTCCAGGTCTCGTTCACGCTCTCGAGAGCGAGAGAGTCGCAGCGGCCG
GCGGCCCATGACGAGGAGTGCCAGTCGGGAGACTCGGGGCGGCTCGAGGC
GTTCGCCCACGGGTTCTTCCCCCTCCCCTCCGCCTTCCCGCACACGCACC
ACCCGCAGCAGCAGCAGGAGCCGCAGGCCCGTCAGCCCTTCCTCCTCCCC
TTCTTCCCTTGAACCCGACACACGGCGGAGAGAGAAGAAGACGACGACAA
GTACGAGCAGCAGCAATGGCAGGCGGAGGGGCAAGTCCCCATCGCCGATT
CCGGAAGACCGGCCTGTGGACCGCACCAGTAGCAAGAGCAGCGGACACAG
CAGCAGGAGCAGCAGCCGGAGGAGGGATGGCGAGAGGAAGGAAGAGAAGG
AGAAGATAAGAGAAAGAGTAAAAAGGAAAGAGAAGGAGGGAGGGAGCAGC
TCCTCCTCCTCCTCCTCTTCCTCCTCCTCGCGCAAGAAGGGAAGATTTGC
AGCGGCCGATGACCCGACGCCGGCACCATCCGCCGCGGATGCGGCCGCGC
TAGTCATGGCCAGGGCCCAAGAGCTGACCCGGAAGATCAAAGCAAGCGAG
GCAACAGCTGCCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCCCAC
CCTTACTTCTCCCCTTCCACTTGCCCCCTCCGTAGGGGGGGCTTCTGGCG
GAGGAGGAGGAGGAGCAGGAGATGTGGAGGCCCAGCAAGCGGCGGCACTG
CAGGAGAAGATCCGGAAGCAGATGGAGAACATGCAGGCCTCGCTCGCTCT
GGCCAAAGCGAAAGCAGCAGCCGCCGCGCTTCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCCGGGAGGAGGGGAAGGGGAGGAGGAGAAGAAACCGTTG
TTCCGGCCGATGCGACTTGATGCACAGGGCCGCGAAATCGACGAGGAAGG
GAATCTGATCAAGATCGATTTGGCCGCCACCCGATCCGTCAAAGCCAACC
TTCCGGGGGGGGGCAAGAAGCGCGATGGCGACGGCGTGGGGAAGAAAAAA
GAACCCGAGGCTGCAGGAGCAGCGGCTGCCGGCGCGGGAAGGAGGGAAAG
GGGGGAGGGAGGGAGGGAGGAGGAGGAGGAGGGGCTGGCGTCATTTGTGG
ACCCCCGGTTGAAAGTCAAGGACCGATCGCGGCGGTCTCACCGCGGGCTG
GCGTTTGCAGAGGCCGGGACGTACGTGAGGATGGCGGAGCGGCAGCGCTC
CAAGGAGCACGGGGCGATGATGGGGGGATTTGCCTCTGGTCGAAACCCGC
GGGCCTACAGCAAGGGCATCCTGGATGTGGGCGAGGAAGGCGCCGCCCCT
GGCCCTCCCTCCTCCTCGTCCTCCCTCCTTCAGTCTCTGGTGCCGCTCCC
TCCCGATGACGTCCTCTCCCCCTCCCAGCCCGTCGTGGAGTGGTGGGACC
TGCCCCTCCTACCGCGGACTCAGCGGGCGGCACTGGCCAGGGACCCCGCA
GCCTACGCAATGGCCAGCTTAGAGAACAGCAAGACCTACACCTACATCCA
ACACCCCGTGCCCCTCAAAGGCATCTACGCAGGCAAGGACGAGGAGAGCG
GCCTCGTCCTCCCCACCTTCCTGACGAAAAAGGAGAGGAAGCGACTGCGG
CGCCAAGCGAGGAAGGAGCGGGAGCAAGAGAAGAGGGACAAGATCGCTCT
GGGCCTGATGCCGCCCCCCGAGCCCAAGATGAACCTCTCGAATTTCATGA
AAGTGCTCGCCAACGAGTCCATCGCCGACCCTTCAGCAGTGACTGCGAAA
ATCCAGGCTCAGATCCGAGAGCGGGAGAAGAATCACGAGATGCGGAATAT
GGCCCGCAAGCTCACCCCGGAAGAGCGTCGGGAGAAGAAGCGGCGAAAGA
TCATCAACGACATGAAGAAGCAGCTCGAGGTAGCCCTTTTCCGGGTCCGG
CAGTTGAGCTCCCCCAAGATCCGTTACAAGATCGACGTGAACGCGCAGCA
GTCCGGCTTGTCAGGTGCGGTACTGAGTTGCCGCGATCCCTCATTTGGGG
AGGAAGGACTGCACCTGGTGGTGGTGGAGGGGGGACCTCGCTCCATCCGT
CGGTTCGTGAAGCTGATGACCCGGAGGATAAAGTGGAACGCCCAGGACGC
CTCGAAGGGGGGAGGGATGGAGGGAGGGGAAGAAGGGGAGGAGAGTGAGG
AGGAGGAAGAGGAGGAGGGAGGGGCCCAAGGAGGAGGGGAAGGGGAAGGG
AAGTGTGAGCTGGTGTGGCGGGGGGTGGTGGCCAAGCCGGCGTTTACGGG
CTTCAAGTTCCAGGAGTGCCGCACCCTGACCACAGCCCGGAAGGTGTTCG
AAGTCAAGGGCGTCGTGCACTACGTCGACATGACCTTCCAGGGCGGCGGG
GGGGGGGAGGGGGAGGACAGGATGACGGGGACGAGGACGGGAAAAGGTAG
AGGAGGAGGGGGCGGGGAAGGATGCGGCAACGTATGTGGAGATGAGACCT
TTTGGGATCCCTCAGTAATGATAAAGAGAGGCCGAAGGAAGAAGAGAGAG
ACAGATATCCTTGCCCACACCAAAAGAATAGAAGGAGACTTACATCGTGT
GTTCTATCGGGGGGGTGGAGCTTGA

Synonyms

Publications