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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr14 | genome | chr14:24907..28823 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G00090.1 vs.
Match: EWM24791.1 (hypothetical protein Naga_102088g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 214.5 bits (545), Expect = 1.000e-51 Identity = 124/185 (67.03%), Postives = 149/185 (80.54%), Query Frame = 0
Query: 391 MEREAIVEQAQLLQSLYDEETARFEAGMRKMVRMVKDEAAASQAKEATARAETTQLVREYTLALEARDALLAAWAEKEAAWGEEREGWGAERARGEAALLEAMKVVERLEREVEVKGHENAAWARKTQEKQQRIKELLASLASLESAKQEAVTEADRLLSVTQEEHVHAAARWQAEVASARVQAR 576
MEREA+VEQA+ LQSLYD ETARFEAGMRKMVRM+K+E AA AKEA AR ET ++REYT AL+A+D LL AW +K+ W REGW ERA GEAALL+A++VV RLE EV + ENAAWARK +EKQ+RIKEL ++++SLE+AK+ A EA RLL++TQEEH AAA WQAE+ASARVQAR
Sbjct: 1 MEREAVVEQARFLQSLYDNETARFEAGMRKMVRMLKEEEAAHLAKEAKARTETQDVIREYTEALKAKDGLLEAWNKKDEEWEAAREGWREERAEGEAALLKALEVVARLEGEVARREQENAAWARKAEEKQKRIKELQSTISSLEAAKRTAGKEAARLLALTQEEHARAAASWQAEMASARVQAR 185
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G00090.1 ID=NO14G00090.1|Name=NO14G00090.1|organism=Nannochloropsis oceanica|type=mRNA|length=2416bp ATGCATGTCTTCATCGGAGACGTGGAGCCCGGTGTCGCCGTTGAGGGTGG TGGAATGGACGTGTACCACGTGCTAGTGCATCTCCAAGCAGACTGCCTGG CCCGCCTCCTCATCTTCTATCGCCTGCTGATACTGCTCCTCCCGCAGCAC CGGAGCACCATTAGCATGCATCAGCAAGCACCGTCACTTCTCTTGGTGGC GGTCCTACTCCTCTCTCATGTCAGCGCATTCCATCTGCCTTTGATCGGCC GTCGCCCCCTCCCCCTTTCTTCCTCCACGCTCATATCCGCCCCTCCATCT CCTTCTGGCAAGTCCACCGTAGAGAAACCAGACCCCGTCCAAGTGTTGGA ATACCTGCGTTCTTTCCTCGCCGCATCCTCCTCCTCCTCCTCCTCCTCTT CACCTTCGTCTTCTTCCCCTTCCTCCATCCCGCACTCCCTCGATCCCTCC CTCCCTCCCGACGTCAAGACCGCCCTAGCGGACATCTTGACCACCGTGCA GGCCCGGGAAGAGGAAGGGCGGGAGGCAGGGAGGCAGGAAGGGGTGGTAA AAGAGTGGAAAATGAAAGCGTTCCGGCTGGAGAATGAGCTTCAGGCAACG CGGCGGAACATGAAGGAGATCGAGAACATTCGGAGGGACATGGCCTACAG ACTGAAGCAGGCGCAGACGACGGCGGAGGAGGGGAGAAAGGGGAGCGAGG AGAAGATGGAGAGGATGGAGAGGGAACTGGAGGAAGGCAGGAAGGGTTTG AAGATGTTGCAGGAGAAGGAGCAAGAGATGGCCAGCCTCCTCTCCATCCT CTCGTCCGCCTCCGACCCCCCTGGCAAGGCCGCGTTGGAAGCCCGTCTCA AGTGCTTCGGGGAGATCGAGCGGAAGATGCAGGGGGTGGAGGGGGGGGCT CTGGCGGCGGTGGAGGCAATGAAGGAGGAGACGAGGCGGATGGAGGGCTG CGTCAGAATGGCGGAGGAAGGTGCCAAGCGCGCGGAGCAAGAGGCTTCGG CACGCGTGCTTGCCGCTCAAGCCGAGGTCGATCGCAGAGAGAAGGAGCTA GAGGAGGCGCGACAGGCCTTGGAGGAGCAGGCATCCGCGCGGGTGGTGGC GGCCCGAGCGGATGTGGCCCGGATGGAGGAGGAGGTGAAAGAGTGGCAGA AGGCTGCGTCCCAAGAGGCCATGGAGAGGGAGGCGATCGTGGAGCAGGCT CAGCTGCTGCAGTCGCTCTACGACGAGGAGACGGCGCGCTTCGAGGCCGG CATGCGCAAGATGGTGCGGATGGTCAAGGACGAGGCAGCCGCCAGCCAGG CCAAGGAGGCAACTGCCCGGGCGGAGACGACGCAGCTCGTGCGGGAGTAC ACGCTGGCACTGGAGGCCCGCGACGCCCTCCTGGCCGCATGGGCCGAGAA AGAGGCGGCGTGGGGGGAGGAGAGGGAGGGATGGGGGGCGGAGCGGGCCC GGGGGGAGGCGGCCTTGCTGGAGGCGATGAAGGTGGTGGAGAGGCTGGAA AGGGAGGTGGAGGTCAAGGGCCACGAGAACGCGGCCTGGGCCCGGAAGAC GCAGGAGAAACAGCAACGCATCAAAGAGCTCCTCGCCTCCCTGGCCTCTC TTGAGAGCGCCAAGCAAGAAGCCGTTACCGAGGCCGACCGTTTACTTTCC GTTACGCAAGAGGAGCACGTCCACGCCGCCGCCCGCTGGCAAGCCGAGGT GGCTTCTGCGCGGGTCCAGGCACGAGCCGACGTGGAGGCCGCGGCGACCC GCGAACGCAACGCCCTGATTATGGTGAGCAGCGCGAGGGAGCAGAATCAG CAGCTATCGGAGGAGGTGGCGCACCTGCGGCAGTCCCTAGGCTTAATGCA CGCGGGGCAGGGGAGCGTAAGGGCGTTGCTGCGGCTGATGGTCAGGAGGG TGGTGGAGAATGTGACGGGGAGGGTGAGGCAGATAAGGGGGGTGGGAGGG AGGAGGGGAAGAGGAGGAGGAGGCTGGCCCTTGGTGGGGTGGAGCAGGAC GGGAGGTGGGAGGGGCTGGAGGAGCTCGTGCCGGTGTATGAGGGGGAGAA GGAGGGAGTGATGGTGGGGGCCTAGAATGGAGGGAGGAAGGGAGGGAGGG AGGGTCCGGTGTACAGTGCGTAAAGAGGAGGTGGGTGGTGGTAGCGAGGA ATCCACGGCCAGCCCGACCTCTGTCCTCGAGGATGGCGAGTCCGGGTATC GTGGAGTGATGAGGAGGAGTGAGAGAGCCATGGGGTGTTTGTGAGGAGTG AGGGAGCCATGGGGGGACTAGGAGGAAGGTGTACGAGGGAGGAGGAAGCG CGAAAAAGATAATTTGACCGCAGCGAAAGATAAAGAAAAAGATGGAGGGA CAGCAGCGATGGATAAAGAAAAAGATGGAAGGACAGCCGCGACAGATAAA GAAAAAGATGGAGGGA back to topprotein sequence of NO14G00090.1 >NO14G00090.1-protein ID=NO14G00090.1-protein|Name=NO14G00090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=687bp MHVFIGDVEPGVAVEGGGMDVYHVLVHLQADCLARLLIFYRLLILLLPQH RSTISMHQQAPSLLLVAVLLLSHVSAFHLPLIGRRPLPLSSSTLISAPPS PSGKSTVEKPDPVQVLEYLRSFLAASSSSSSSSSPSSSSPSSIPHSLDPS LPPDVKTALADILTTVQAREEEGREAGRQEGVVKEWKMKAFRLENELQAT RRNMKEIENIRRDMAYRLKQAQTTAEEGRKGSEEKMERMERELEEGRKGL KMLQEKEQEMASLLSILSSASDPPGKAALEARLKCFGEIERKMQGVEGGA LAAVEAMKEETRRMEGCVRMAEEGAKRAEQEASARVLAAQAEVDRREKEL EEARQALEEQASARVVAARADVARMEEEVKEWQKAASQEAMEREAIVEQA QLLQSLYDEETARFEAGMRKMVRMVKDEAAASQAKEATARAETTQLVREY TLALEARDALLAAWAEKEAAWGEEREGWGAERARGEAALLEAMKVVERLE REVEVKGHENAAWARKTQEKQQRIKELLASLASLESAKQEAVTEADRLLS VTQEEHVHAAARWQAEVASARVQARADVEAAATRERNALIMVSSAREQNQ QLSEEVAHLRQSLGLMHAGQGSVRALLRLMVRRVVENVTGRVRQIRGVGG RRGRGGGGWPLVGWSRTGGGRGWRSSCRCMRGRRRE* back to topmRNA from alignment at chr14:24907..28823- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G00090.1 ID=NO14G00090.1|Name=NO14G00090.1|organism=Nannochloropsis oceanica|type=mRNA|length=3917bp|location=Sequence derived from alignment at chr14:24907..28823- (Nannochloropsis oceanica) ATGCATGTCTTCATCGGAGACGTGGAGCCCGGTGTCGCCGTTGAGGGTGG
TGGAATGGACGTGTACCACGTGCTAGTGCATCTCCAAGCAGGTATCAAGA
CACGGTACACCATAGAAGATGGACAGTCGGAGTGCTGCGCAACAAGTTGA
ACAAGGCAGTCGCAGTCGGACCCCTCGAGTCGTCCGTGCACTAAAAGCAG
CAAAATCCTGCCTATTCATGCATACCTTGTTGTGAAATTAGGTGCTCCCT
CAACATATCGTATTATTGATTTTAACACCAAATTGCCATCTTTCTTCTAC
CCTTCAGTTCAAAACAGACTGCCTGGCCCGCCTCCTCATCTTCTATCGCC
TGCTGATACTGCTCCTCCCGCAGCACCGGAGCACCATTAGCATGCATCAG
CAAGCACCGTCACTTCTCTTGGTGGCGGTCCTACTCCTCTCTCATGTCAG
CGCATTCCATCTGCCTTTGATCGGCCGTCGCCCCCTCCCCCTTTCTTCCT
CCACGCTCATATCCGCCCCTCCATCTCCTTCTGGCAAGTCCACCGTAGAG
AAACCAGACCCCGTCCAAGTGTTGGAATACCTGCGTTCTTTCCTCGCCGC
ATCCTCCTCCTCCTCCTCCTCCTCTTCACCTTCGTCTTCTTCCCCTTCCT
CCATCCCGCACTCCCTCGATCCCTCCCTCCCTCCCGACGTCAAGACCGCC
CTAGCGGACATCTTGACCACCGTGCAGGCCCGGGAAGAGGAAGGGCGGGA
GGCAGGGAGGCAGGAAGGGGTGGTAAAAGAGTGGAAAATGAAAGCGTTCC
GGTAAGCGAGTGGTTGAATGCTCGGATTGGGCGTGACGCGAGGAAAGGGA
GGGGATCGGGAGTGATGCCTTTATGGATGGGGACATAGTCAATTTGCGGT
TAATTGGGCTCCAGATTAAGGGCTAATGTCTATCTTTTCTATATCTATCC
CTCCCTCCCTTCGTTTCTCTTCTCCTATCTTGAGGCTGGAGAATGAGCTT
CAGGCAACGCGGCGGAACATGAAGGAGATCGAGAACATTCGGAGGGACAT
GGCCTACAGACTGAAGCAGGCGCAGACGACGGCGGAGGAGGGGAGAAAGG
GGAGCGAGGAGAAGATGGAGAGGATGGAGAGGGAACTGGAGGAAGGCAGG
AAGGGTTTGAAGATGTTGCAGGAGAAGGAGGTGAGGAAGGAGGGCAGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGAAGGTGGCCAGCTT
TGAAGGAGAGGGAAATGACTGGCTACATCATTTAAACGACTGAACCTCGC
CTTCTTACACCTCTAATCTCCCTTGCTCATCCCCTTTCCTCTCTCTTTCC
CTCCCTCCCACCCTTCCTTCCCCTCAGCAAGAGATGGCCAGCCTCCTCTC
CATCCTCTCGTCCGCCTCCGACCCCCCTGGCAAGGCCGCGTTGGAAGCCC
GTCTGTCCTCCCTCCCTTCCTCGCCCCCCCCCCCTCCTCTTTTTCCCCCT
CCTCCTCCACCGTGGAGGCGTACGGGGCATGGTACAGCAAGTGCTTCGGG
GAGATCGAGCGGAAGATGCAGGGGGTGGAGGGGGGGGCTCTGGCGGCGGT
GGAGGCAATGAAGGAGGAGACGAGGCGGATGGAGGGCTGCGTCAGAATGG
CGGAGGAAGGTAGGAAATTAGGGAGGGAGGGAGGGAAGGAGGGAAGGAGG
GAGGGAGGCAGAAATGGAAATTACTTTTCCCAGTAGAGTTGTCACTTGAC
AAGTCATCCCCCGTCTCTTCCTTCCTCCCTCCCTCCCTCCGTCCCTCCCT
CCCTCTACCTCCCAGGTGCCAAGCGCGCGGAGCAAGAGGCTTCGGCACGC
GTGCTTGCCGCTCAAGCCGAGGTCGATCGCAGAGAGAAGGAGCTAGAGGA
GGCGCGACAGGTAACGGCTTCTCCCTCCCTCCCTCCCTCCCTCCTTTCCT
CCTTATCTCCCTCCTTTCCTTCCATCGGGCCCGATAGAACTGAGCTGCCC
CTCTTTTCCCTCCTTCCCTCCTTCCCTCCTTCCCTCCTTCCCTCCCTCTA
GGCCTTGGAGGAGCAGGCATCCGCGCGGGTGGTGGCGGCCCGAGCGGATG
TGGCCCGGATGGAGGAGGAGGTGAAAGAGTGGCAGAAGGTGAGGGAGGGA
GGGCGGGAGGGTCCGGACGACAACACCCTGGATTTGAGCTAGGATTGACA
TTTGGTGTTTTCTTCCGCCCTCCCTCCCTCCCTCAGGCTGCGTCCCAAGA
GGCCATGGAGAGGGAGGCGATCGTGGAGCAGGCTCAGCTGCTGCAGTCGC
TCTACGACGAGGAGACGGCGCGCTTCGAGGCCGGCATGCGCAAGATGGTG
CGGATGGTCAAGGACGAGGCAGCCGCCAGCCAGGCCAAGGTACGTCCCTC
CCTCTTTGTCGGTCCCTTCCTTCCTCCGCCTTTCCCTCCTTTCTTGATGG
CATGGCATGTCTGAACGATCCTCTTCTCAACCTCCTCCCTCCCTCCCTCC
TCCAGGAGGCAACTGCCCGGGCGGAGACGACGCAGCTCGTGCGGGAGTAC
ACGCTGGCACTGGAGGCCCGCGACGCCCTCCTGGCCGCATGGGCCGAGAA
AGAGGCGGCGTGGGGGGAGGAGAGGGAGGGATGGGGGGCGGAGCGGGCCC
GGGGGGAGGCGGCCTTGCTGGAGGCGATGAAGGTGGTGGAGAGGCTGGAA
AGGGAGGTGGAGGTCAAGGGCCACGAGAACGCGGCCTGGGCCCGGAAGAC
GCAGGAGGTATGGAGGGAGGGAGGGAGGGAGGGCGGGGGTGATTCCCCCC
CCTCCCCCCCCATCTCATGGAGTCACCTTGCTCTTATTGTCCTTCCAGAG
ATCATTCGCCCCTCCTACCCTTCCAACCTCCATCTCTTCCGCCCGCCCTT
CCTCTTTCCCCCCCTCCGCAGAAACAGCAACGCATCAAAGAGCTCCTCGC
CTCCCTGGCCTCTCTTGAGAGCGCCAAGCAAGAAGCCGTTACCGAGGCCG
ACCGTTTACTTTCCGTTACGCAAGAGGAGCACGTCCACGCCGCCGCCCGC
TGGCAAGCCGAGGTGGCTTCTGCGCGGGTCCAGGCACGAGTAAGTCTCCC
CTCGCTCCCTCCCTCCCTTCCTCCTTCCCTCCCTCACTTGTGAACGCATA
GGAGGTTTTGTGACATTCAGTCCTCCCTCCCTCCCTCCCTCCTTCCCTCC
CTCCCTCTCTCCCTTCCCTCCCCCAGGCCGACGTGGAGGCCGCGGCGACC
CGCGAACGCAACGCCCTGATTATGGTGAGCAGCGCGAGGGAGCAGAATCA
GCAGCTATCGGAGGAGGTGGCGCACCTGCGGCAGTCCCTAGGCTTAATGC
ACGCGGGGCAGGGGAGCGTAAGGGCGTTGCTGCGGCTGATGGTCAGGAGG
GTGGTGGAGAATGTGACGGGGAGGGTGAGGCAGATAAGGGGGGTGGGAGG
GAGGAGGGGAAGAGGAGGAGGAGGCTGGCCCTTGGTGGGGTGGAGCAGGA
CGGGAGGTGGGAGGGGCTGGAGGAGCTCGTGCCGGTGTATGAGGGGGAGA
AGGAGGGAGTGATGGTGGGGGCCTAGAATGGAGGGAGGAAGGGAGGGAGG
GAGGGTCCGGTGTACAGTGCGTAAAGAGGAGGTGGGTGGTGGTAGCGAGG
AATCCACGGCCAGCCCGACCTCTGTCCTCGAGGATGGCGAGTCCGGGTAT
CGTGGAGTGATGAGGAGGAGTGAGAGAGCCATGGGGTGTTTGTGAGGAGT
GAGGGAGCCATGGGGGGACTAGGAGGAAGGTGTACGAGGGAGGAGGAAGC
GCGAAAAAGATAATTTGACCGCAGCGAAAGATAAAGAAAAAGATGGAGGG
ACAGCAGCGATGGATAAAGAAAAAGATGGAAGGACAGCCGCGACAGATAA
AGAAAAAGATGGAGGGA back to topCoding sequence (CDS) from alignment at chr14:24907..28823- >NO14G00090.1 ID=NO14G00090.1|Name=NO14G00090.1|organism=Nannochloropsis oceanica|type=CDS|length=2061bp|location=Sequence derived from alignment at chr14:24907..28823- (Nannochloropsis oceanica) ATGCATGTCTTCATCGGAGACGTGGAGCCCGGTGTCGCCGTTGAGGGTGG TGGAATGGACGTGTACCACGTGCTAGTGCATCTCCAAGCAGACTGCCTGG CCCGCCTCCTCATCTTCTATCGCCTGCTGATACTGCTCCTCCCGCAGCAC CGGAGCACCATTAGCATGCATCAGCAAGCACCGTCACTTCTCTTGGTGGC GGTCCTACTCCTCTCTCATGTCAGCGCATTCCATCTGCCTTTGATCGGCC GTCGCCCCCTCCCCCTTTCTTCCTCCACGCTCATATCCGCCCCTCCATCT CCTTCTGGCAAGTCCACCGTAGAGAAACCAGACCCCGTCCAAGTGTTGGA ATACCTGCGTTCTTTCCTCGCCGCATCCTCCTCCTCCTCCTCCTCCTCTT CACCTTCGTCTTCTTCCCCTTCCTCCATCCCGCACTCCCTCGATCCCTCC CTCCCTCCCGACGTCAAGACCGCCCTAGCGGACATCTTGACCACCGTGCA GGCCCGGGAAGAGGAAGGGCGGGAGGCAGGGAGGCAGGAAGGGGTGGTAA AAGAGTGGAAAATGAAAGCGTTCCGGCTGGAGAATGAGCTTCAGGCAACG CGGCGGAACATGAAGGAGATCGAGAACATTCGGAGGGACATGGCCTACAG ACTGAAGCAGGCGCAGACGACGGCGGAGGAGGGGAGAAAGGGGAGCGAGG AGAAGATGGAGAGGATGGAGAGGGAACTGGAGGAAGGCAGGAAGGGTTTG AAGATGTTGCAGGAGAAGGAGCAAGAGATGGCCAGCCTCCTCTCCATCCT CTCGTCCGCCTCCGACCCCCCTGGCAAGGCCGCGTTGGAAGCCCGTCTCA AGTGCTTCGGGGAGATCGAGCGGAAGATGCAGGGGGTGGAGGGGGGGGCT CTGGCGGCGGTGGAGGCAATGAAGGAGGAGACGAGGCGGATGGAGGGCTG CGTCAGAATGGCGGAGGAAGGTGCCAAGCGCGCGGAGCAAGAGGCTTCGG CACGCGTGCTTGCCGCTCAAGCCGAGGTCGATCGCAGAGAGAAGGAGCTA GAGGAGGCGCGACAGGCCTTGGAGGAGCAGGCATCCGCGCGGGTGGTGGC GGCCCGAGCGGATGTGGCCCGGATGGAGGAGGAGGTGAAAGAGTGGCAGA AGGCTGCGTCCCAAGAGGCCATGGAGAGGGAGGCGATCGTGGAGCAGGCT CAGCTGCTGCAGTCGCTCTACGACGAGGAGACGGCGCGCTTCGAGGCCGG CATGCGCAAGATGGTGCGGATGGTCAAGGACGAGGCAGCCGCCAGCCAGG CCAAGGAGGCAACTGCCCGGGCGGAGACGACGCAGCTCGTGCGGGAGTAC ACGCTGGCACTGGAGGCCCGCGACGCCCTCCTGGCCGCATGGGCCGAGAA AGAGGCGGCGTGGGGGGAGGAGAGGGAGGGATGGGGGGCGGAGCGGGCCC GGGGGGAGGCGGCCTTGCTGGAGGCGATGAAGGTGGTGGAGAGGCTGGAA AGGGAGGTGGAGGTCAAGGGCCACGAGAACGCGGCCTGGGCCCGGAAGAC GCAGGAGAAACAGCAACGCATCAAAGAGCTCCTCGCCTCCCTGGCCTCTC TTGAGAGCGCCAAGCAAGAAGCCGTTACCGAGGCCGACCGTTTACTTTCC GTTACGCAAGAGGAGCACGTCCACGCCGCCGCCCGCTGGCAAGCCGAGGT GGCTTCTGCGCGGGTCCAGGCACGAGCCGACGTGGAGGCCGCGGCGACCC GCGAACGCAACGCCCTGATTATGGTGAGCAGCGCGAGGGAGCAGAATCAG CAGCTATCGGAGGAGGTGGCGCACCTGCGGCAGTCCCTAGGCTTAATGCA CGCGGGGCAGGGGAGCGTAAGGGCGTTGCTGCGGCTGATGGTCAGGAGGG TGGTGGAGAATGTGACGGGGAGGGTGAGGCAGATAAGGGGGGTGGGAGGG AGGAGGGGAAGAGGAGGAGGAGGCTGGCCCTTGGTGGGGTGGAGCAGGAC GGGAGGTGGGAGGGGCTGGAGGAGCTCGTGCCGGTGTATGAGGGGGAGAA GGAGGGAGTGA back to top
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