NO13G03340.1, NO13G03340.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO13G03340.1
Unique Name	NO13G03340.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2926
Alignment location	chr13:988499..994443 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr13	genome	chr13:988499..994443 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO13G03340.1 vs.
Match: EWM20762.1 (acetyl- synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1260.4 bits (3260), Expect = 0.000e+0
Identity = 604/752 (80.32%), Postives = 659/752 (87.63%), Query Frame = 0

Query:   16 LVLHMAAIGVAQAFLCPSAAFPPSFVSPQHGAAVRRGEASSFPRLSSSRPSFAVVG------DETKDETGLPLDGNE----VEEVVFHPSEEYFEKVPHHYDNVEDYLVHYQKSIDDPAAFWADIGQEFHWEKPWEETVSHNFNRSAGPVHVRFFHGGETNIAYNALDRHVAAGLGDRVAFHTERNDLEPRKETGAGGQKSTYTYLEALEEVSRISNVLKSMGVRKGDKVGLFIPMVAELPLAMLACARIGAVHTVVFAGFSKEALADRLCDAECKVVIACDGVFRGTKLIPLFRTVDDAIKICKERGHTIEHSLVLERLGGEVAGAQLTPGRDVWWHEAVAVAPAICPVEWVPSEHPLFILYTSGSTGKPKGVLHTTGGYMIQAATTFRHVFNVRPEKNDLFLCTADCGWITGHSYVTYGPLLNGASQVVFEGVPSYPDVGRLWNIVDKYGVTHLYTAPTAIRSLMREGDHHVTKYARTSLKVLGSVGEPINPEAWKWYHEVVGGSRCPIVDTWWQTETGAIAIAPLPIKGWGQKPGSASLPFFGIQPVLLSQDGKELTGATEGLLAIKSPWPSTIRSIYGDHERMEQTYFSFDGYYLTGDNARRDADGYYWITGRADDVVIVSGHNLGTAEVESSLAQHPRVAEAAVVGIPHDIKGNCLYCYVTLKAGEEPSAELATQLRTLVRNNLGAFAAPDFIQWAPTLPKTRSGKVMRRILRKVAAGGKAVTVEELGDMSTLADPDVITELIANHV 758
            LV+ M  + VA+AFL P    P +       AA     + +   +    P F + G        +       ++G E    VEEVVFHP++EYF++VPHHYD+VEDYLVHY+KSI DP AFW++I + FHWE PWEET+S+NFNRSAGP+HVRFFHGGETNIAYNALDRHVAAGLGDR+AF+TERNDLEP +E+G GG K  YTY EALEEVSRI+NVLKSMGV++GDKVGLF+PMVAELPLAMLACARIGAVHTVVFAGFSKEALADRLCDA CK VIACDGVFRG+KLIPLF TVD AI++C ERGH IEH+LVL+RLGG+VAG  LTPGRDVWWHEA A A + CPVEWVPSEHPLFILYTSGSTGKPKGVLHTTGGYMIQAATTFRHVFNVRPEKND+FLCTADCGWITGHSYVTYGPLLNGASQVVFEGVPSYPDVGRLW++VDKYG+THLYTAPTAIRSLMREGD HVTKYAR+SLKVLGSVGEPINPEAWKWYHEVVGG RCPIVDTWWQTETGAIAIAPLPIKGWGQKPGSASLPF GI+PVLLSQDGKEL G TEGLLAIKSPWPST+RSIYGDHERMEQTYFSFDGYYLTGDNARRD+DGYYWITGRADDVVIVSGHNLGTAEVE++LAQHP VAEAAVVGIPHD+KGNCLYCYVTLKAG+ PS +L  QL+  VRN LGAFAAPDFIQWAP LPKTRSGKVMRRILRKVAAGGKA+ VE+LGD STLADP+VI ELIANHV
Sbjct:   12 LVMGMVGMRVAKAFLSPFC--PHATAECPSNAAFTTSSSCTGHAMRPPPPLFHLPGFSSARHAHSSTARAASVEGTEASRGVEEVVFHPADEYFQQVPHHYDHVEDYLVHYEKSIKDPEAFWSEIARNFHWETPWEETLSYNFNRSAGPIHVRFFHGGETNIAYNALDRHVAAGLGDRIAFYTERNDLEPIRESGPGGLKDQYTYREALEEVSRIANVLKSMGVKRGDKVGLFLPMVAELPLAMLACARIGAVHTVVFAGFSKEALADRLCDAGCKAVIACDGVFRGSKLIPLFHTVDAAIQLCNERGHIIEHTLVLKRLGGDVAGVHLTPGRDVWWHEATAKASSSCPVEWVPSEHPLFILYTSGSTGKPKGVLHTTGGYMIQAATTFRHVFNVRPEKNDIFLCTADCGWITGHSYVTYGPLLNGASQVVFEGVPSYPDVGRLWHMVDKYGITHLYTAPTAIRSLMREGDEHVTKYARSSLKVLGSVGEPINPEAWKWYHEVVGGGRCPIVDTWWQTETGAIAIAPLPIKGWGQKPGSASLPFLGIEPVLLSQDGKELEGPTEGLLAIKSPWPSTLRSIYGDHERMEQTYFSFDGYYLTGDNARRDSDGYYWITGRADDVVIVSGHNLGTAEVEAALAQHPSVAEAAVVGIPHDVKGNCLYCYVTLKAGQAPSPDLEKQLKVSVRNQLGAFAAPDFIQWAPNLPKTRSGKVMRRILRKVAAGGKAINVEDLGDTSTLADPEVIKELIANHV 761

The following BLAST results are available for this feature:

BLAST of NO13G03340.1 vs.

BLAST of NO13G03340.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM20762.1	0.000e+0	80.32	acetyl- synthetase [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO13G03340	NO13G03340	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO13G03340.1	NO13G03340.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO13G03340.1.cds1	NO13G03340.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds2	NO13G03340.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds3	NO13G03340.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds4	NO13G03340.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds5	NO13G03340.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds6	NO13G03340.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds7	NO13G03340.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds8	NO13G03340.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds9	NO13G03340.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds10	NO13G03340.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds11	NO13G03340.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds12	NO13G03340.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds13	NO13G03340.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds14	NO13G03340.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds15	NO13G03340.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds16	NO13G03340.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds17	NO13G03340.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds18	NO13G03340.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds19	NO13G03340.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds20	NO13G03340.1.cds20	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds21	NO13G03340.1.cds21	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03340.1.cds22	NO13G03340.1.cds22	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr13:988499..994443-
coding sequence from alignment at chr13:988499..994443-

mRNA sequence

>NO13G03340.1 ID=NO13G03340.1|Name=NO13G03340.1|organism=Nannochloropsis oceanica|type=mRNA|length=2926bp
CCTACCTATGCACAGCGAAGGAACCGTATAGTATTAAACCATGTGCGAAA
ACCATAACAGAAAGGCGTGAAATATACCCTAAAAATGGGCCTGATGAGGT
GTTCGGACATGCCTGTTTTCTGGTGGCCGTGTTGCAAGGACCACGCCTCT
ATGTAATTAACCTCTCTGCGCTGGGCGAACCTATTCTCTTAGGTGAAGGA
TGGAGGTCATAATTCCATGCAGGAAGCATGGCAGCTTTTTAAAGTCCGCC
CGGGCACTGTGTCCTTGCGACCTCCTCCTTCATTCCTCTTGAACTTGCTC
CGCGTTAGGGGGAATCATCAGCATCCGTTCTGCCACTTCTTCCTTTTCCC
CTCACCCTTATAAACAAAAACGACAGCTTACACAATGACAAAACGACAAT
GTAAAACGTGGTATGTCATGAATGGCATCCTTGTCCTGCACATGGCGGCC
ATTGGTGTGGCGCAGGCATTCCTGTGCCCCTCCGCCGCCTTCCCGCCCTC
CTTCGTATCTCCTCAACATGGCGCAGCCGTCCGGCGAGGAGAAGCTAGTT
CTTTTCCCCGCCTGTCGTCCTCCCGTCCTTCTTTCGCGGTCGTAGGAGAT
GAAACGAAGGATGAAACAGGCCTTCCTTTGGATGGAAATGAGGTAGAAGA
GGTGGTCTTCCACCCTTCGGAAGAGTACTTTGAAAAAGTGCCGCATCATT
ACGACAACGTGGAAGATTACCTCGTCCACTACCAGAAGTCTATCGATGAC
CCCGCTGCTTTTTGGGCTGATATCGGCCAGGAGTTTCACTGGGAGAAACC
CTGGGAGGAGACGGTCTCGCACAATTTCAACAGGTCTGCCGGTCCTGTCC
ATGTCCGTTTTTTCCACGGCGGCGAAACCAACATCGCCTACAACGCCCTC
GACCGACACGTGGCTGCAGGCCTCGGTGACCGCGTGGCTTTTCACACGGA
GCGAAACGACCTCGAACCCCGCAAGGAGACAGGGGCGGGCGGTCAAAAAA
GCACATATACCTATTTAGAGGCACTTGAAGAGGTCTCCCGCATTTCCAAC
GTCTTGAAGTCAATGGGTGTAAGGAAAGGGGACAAAGTCGGCCTTTTTAT
TCCGATGGTCGCCGAGCTCCCGCTGGCCATGCTGGCCTGTGCCCGCATTG
GTGCGGTCCACACGGTCGTTTTCGCAGGCTTCTCCAAAGAGGCTCTCGCT
GATCGCCTCTGCGATGCAGAGTGCAAGGTCGTCATTGCCTGCGACGGCGT
TTTCCGAGGCACGAAGCTTATCCCTCTCTTTCGAACGGTCGACGACGCCA
TCAAGATCTGCAAGGAGCGGGGCCACACCATCGAGCACTCCTTAGTCTTG
GAGCGCCTTGGCGGCGAAGTCGCTGGCGCACAGCTTACGCCGGGCCGCGA
CGTCTGGTGGCATGAAGCTGTGGCCGTGGCCCCTGCAATCTGTCCTGTAG
AGTGGGTGCCGTCTGAGCACCCCCTCTTCATCCTTTACACCAGCGGCTCC
ACGGGCAAACCCAAAGGCGTCCTTCACACTACGGGTGGCTATATGATTCA
AGCCGCGACCACTTTCCGGCATGTATTCAACGTGCGGCCGGAGAAAAACG
ACTTGTTCCTCTGCACTGCCGACTGTGGCTGGATCACGGGTCACTCCTAC
GTCACCTATGGCCCCTTGCTCAATGGCGCATCCCAAGTTGTGTTCGAGGG
AGTGCCAAGCTACCCTGACGTCGGACGCCTATGGAATATCGTGGACAAGT
ACGGCGTCACTCACCTCTATACAGCCCCGACCGCTATCCGGTCTCTCATG
CGAGAAGGGGATCATCACGTCACCAAATACGCGCGAACGAGCCTCAAGGT
TTTGGGGTCAGTCGGCGAGCCTATCAATCCGGAGGCTTGGAAGTGGTACC
ACGAGGTTGTGGGGGGTAGTCGGTGCCCGATTGTGGACACATGGTGGCAA
ACTGAGACAGGTGCCATCGCTATCGCTCCCTTGCCCATCAAAGGCTGGGG
TCAGAAGCCAGGTAGTGCCTCTTTGCCTTTCTTCGGCATACAGCCGGTAC
TCCTGTCGCAAGACGGAAAGGAACTTACCGGCGCTACCGAAGGCCTCCTC
GCCATCAAATCTCCTTGGCCAAGCACAATTCGCTCAATCTATGGCGATCA
CGAACGTATGGAGCAAACATATTTCTCCTTCGATGGCTACTACTTGACTG
GAGATAACGCACGGCGGGACGCAGACGGCTACTACTGGATCACTGGCCGC
GCTGACGATGTAGTCATTGTCTCGGGACACAACCTTGGGACTGCCGAGGT
CGAGTCATCGCTGGCCCAGCATCCCCGTGTGGCCGAGGCTGCAGTCGTCG
GGATTCCTCATGACATCAAGGGCAATTGCCTTTACTGCTACGTAACTCTC
AAAGCAGGAGAAGAACCCAGTGCAGAGTTGGCGACTCAGCTGAGAACATT
GGTCCGCAACAATCTTGGTGCCTTCGCAGCCCCTGACTTTATCCAGTGGG
CTCCCACTCTGCCCAAGACGCGCTCTGGGAAGGTCATGCGGCGCATTCTC
CGAAAGGTGGCAGCCGGCGGTAAGGCCGTCACCGTGGAGGAACTGGGCGA
TATGAGCACGCTGGCCGACCCGGATGTAATCACTGAATTAATTGCCAACC
ATGTGTAGAGGAAATGAAAGAGAGAAAGGGGAATGAAGGGAGGACGACGA
CGACGACGACGAAGAAGAAGAACTTCCCTTGCATATGTAGATAAGTAGCG
ACTACCGATTAGCTGCGAAAGTGAAAAGTGGGTTTGTGGATGGCGGGAAG
GAGAGAAATGACTGAATTGAAGCAAGAAGGAGGTGGGGGACGATTATGGC
AGATATTTACCGAAAAATATTTATTACATACAAAATATATAGATGAAAGA
AGAAAGAATGAAAAAGGGGGGTTAGA

protein sequence of NO13G03340.1

>NO13G03340.1-protein ID=NO13G03340.1-protein|Name=NO13G03340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=758bp
MTKRQCKTWYVMNGILVLHMAAIGVAQAFLCPSAAFPPSFVSPQHGAAVR
RGEASSFPRLSSSRPSFAVVGDETKDETGLPLDGNEVEEVVFHPSEEYFE
KVPHHYDNVEDYLVHYQKSIDDPAAFWADIGQEFHWEKPWEETVSHNFNR
SAGPVHVRFFHGGETNIAYNALDRHVAAGLGDRVAFHTERNDLEPRKETG
AGGQKSTYTYLEALEEVSRISNVLKSMGVRKGDKVGLFIPMVAELPLAML
ACARIGAVHTVVFAGFSKEALADRLCDAECKVVIACDGVFRGTKLIPLFR
TVDDAIKICKERGHTIEHSLVLERLGGEVAGAQLTPGRDVWWHEAVAVAP
AICPVEWVPSEHPLFILYTSGSTGKPKGVLHTTGGYMIQAATTFRHVFNV
RPEKNDLFLCTADCGWITGHSYVTYGPLLNGASQVVFEGVPSYPDVGRLW
NIVDKYGVTHLYTAPTAIRSLMREGDHHVTKYARTSLKVLGSVGEPINPE
AWKWYHEVVGGSRCPIVDTWWQTETGAIAIAPLPIKGWGQKPGSASLPFF
GIQPVLLSQDGKELTGATEGLLAIKSPWPSTIRSIYGDHERMEQTYFSFD
GYYLTGDNARRDADGYYWITGRADDVVIVSGHNLGTAEVESSLAQHPRVA
EAAVVGIPHDIKGNCLYCYVTLKAGEEPSAELATQLRTLVRNNLGAFAAP
DFIQWAPTLPKTRSGKVMRRILRKVAAGGKAVTVEELGDMSTLADPDVIT
ELIANHV*

mRNA from alignment at chr13:988499..994443-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO13G03340.1 ID=NO13G03340.1|Name=NO13G03340.1|organism=Nannochloropsis oceanica|type=mRNA|length=5945bp|location=Sequence derived from alignment at chr13:988499..994443- (Nannochloropsis oceanica)
CCTACCTATGCACAGCGAAGGAACCGTATAGTATTAAACCATGTGCGAAA
ACCATAACAGAAAGGCGTGAAATATACCCTAAAAATGGGCCTGATGAGGT
GTTCGGACATGCCTGTTTTCTGGTGGCCGTGTTGCAAGGACCACGCCTCT
ATGTAATTAACCTCTCTGCGCTGGGCGAACCTATTCTCTTAGGTGAAGGA
TGGAGGTCATAATTCCATGCAGGAAGCATGGCAGCTTTTTAAAGTCCGCC
CGGGCACTGTGTCCTTGCGACCTCCTCCTTCATTCCTCTTGAACTTGCTC
CGCGTTAGGGGGAATCATCAGCATCCGTTCTGCCACTTCTTCCTTTTCCC
CTCACCCTTATAAACAAAAACGACAGCTTACACAATGACAAAACGACAAT
GTAAAACGTGGTATGTCATGAATGGCATCCTTGTCCTGCACATGGCGGCC
ATTGGTGTGGCGCAGGTACGACAAGAAGGGTGGTTGGGAGGGGGAGGGAG
GGAAGGACGGAGGGGGGTGGGGAGGTCGTCGAGTCTTGAGGTATTTGACT
TAAAAGGAACAAGACAATGTTTACAAAGTTCTGAGTCTGTGAAATCAAGT
CACGATACCGCATGACTTTCAGGAGATGCAATGCCAGTGCCGCCATTTTG
CTTTTCGTGTGACATGGACGCATGAAAGCTGGCTGTCGGAAGAGGTAGCT
CTGATCTCAGTCTGAATCTGTGGCGACAGATCGGTCCAATATAACGCAAT
CATAGGATATCTCCACCTTCGAAAACACGCACTCATATCTAATTTCTCCC
ATTCAGGCATTCCTGTGCCCCTCCGCCGCCTTCCCGCCCTCCTTCGTATC
TCCTCAACATGGCGCAGCCGTCCGGCGAGGAGAAGCTAGTTCTTTTCCCC
GCCTGTCGTCCTCCCGTCCTTCTTTCGCGGTCGTAGGAGATGAAACGAAG
GATGAAACAGGCCTTCCTTTGGATGGAAATGAGGTAGAAGAGGTGGTCTT
CCACCCTTCGGAAGAGTACTTTGAAAAAGGTGAGGGAGGGAGGGATGAAA
GGGACAGAGGGCAGGCGGGCGGGGGGGAGAGAGGGGGGGTAGAGGAGTCT
GAGGCATCGGCACGCACTAACGCACATCCTTTCATATTAATCGGTACATG
TAGTGCCGCATCATTACGACAACGTGGAAGATTACCTCGTCCACTACCAG
AAGGTATGCTCCTCTCTTATTCCCTTTTTCCTTCGTTCATGTCAAGTCGC
TCATATCATTCTTCTTCCTATTCGCAAATCCCTCGTCACAGTCTATCGAT
GACCCCGCTGCTTTTTGGGCTGATATCGGCCAGGAGTTTCACTGGGAGAA
ACCCTGGGAGGAGACGGGTAAGGAGAGAGGGAGAGAGGAAGGGATGGTTG
AATGTTGAACATGTCTCGTGTGGGTTAACCTTCCAGCCTCCGACCTGCTT
TCCCGTCTCATTACACCTGCCTACCCATTACAAACCACTATTTTCCCAAT
TACTCCGTCCGTTATCTCCTCCTTATCCTTCCCGCAGTCTCGCACAATTT
CAACAGGTCTGCCGGTCCTGTCCATGTCCGTTTTTTCCACGGCGGCGAAA
CCAACATCGCCTACAACGCCCTCGACCGACACGTGGCTGCAGGCCTCGGT
GACCGGTGCGTGCTCTGTCTGACCTCCTCTAGCCTCTCGTGCCCTTGATC
ACGCTGCCTAAGGCGAGACTGCTTCACTCACATCTTCTTCGTGGCATGAC
TCCCTCCCTCCCTTCCTCCCCTCCTCACCCAGCGTGGCTTTTCACACGGA
GCGAAACGACCTCGAACCCCGCAAGGAGACAGGGGCGGGCGGTCAAAAAA
GCACATATACCTATTTAGAGGCACTTGAAGAGGTCTCCCGCATTTCCAAC
GTCTTGAAGGTATTCGACCTCCTTCGCTTCTTCCTCTTTCTCACCCCATC
GGAACCTCATCCTATCATGCAAGCCTCACTTTCCTCGCCTCCCTCCCTCC
CTCCCTACCTCTTGAGTCAATGGGTGTAAGGAAAGGGGACAAAGTCGGCC
TTTTTATTCCGATGGTCGCCGAGCTCCCGCTGGCCATGCTGGCCTGTGCC
CGGTACGTCCTTCCCTCCCTCCCTCCCTCCTTCCGACGCGTCGTCCATGT
TACTGACTTTTGCGGCGCTCCTTCCTTCCCCCCCTACTTTCTCTCCTTAG
CATTGGTGCGGTCCACACGGTCGTTTTCGCAGGCTTCTCCAAAGAGGCTC
TCGCTGATCGCCTCTGCGATGCAGAGTGCAAGGTACATCCCCGCCCTTCT
TCCCTCCTTCCCCCCTTCCCTTCCTCCTTTTCCTCTGTGCCCCCCTTCCC
CTTCTCTTTTCGACCAGTACTCAGACACCCTTTATTGTCTCCCCTTATCC
CTCCCTGCCTCCAGGTCGTCATTGCCTGCGACGGCGTTTTCCGAGGCACG
AAGCTTATCCCTCTCTTTCGAACGGTCGACGACGCCATCAAGATCTGCAA
GGTACCCAAAGGATGTGAGAGATAGAGCGAATGAAGTCTCTTGAAATGTC
TATCATTTTGACATATGACTCGAAGGCATCCACTCAACTCCTGTCCTCTC
TCTTCCCCGCACAAACAGGAGCGGGGCCACACCATCGAGCACTCCTTAGT
CTTGGAGCGCCTTGGCGGCGAAGTCGCTGGCGCACAGCTTACGCCGGGCC
GCGACGGTATGTGCATCCTCTCGCTCTCTCGTTTACTGTCATCGTTACAT
ACGAACCCTAATAATTCCCTATATTCCTCCCTCCGCCCGTTCCTCCTCAA
GTCTGGTGGCATGAAGCTGTGGCCGTGGCCCCTGCAATCTGTCCTGTAGA
GTGGGTGCCGTCTGAGCACCCCCTCTTCATCCTTTACACCAGCGGCTCCA
CGGGCAAACCCAAAGGTAGACAGCAAGAGGAGGATGAGAAGCGTCCTTTT
CCCTTTCGACTTGACCCAACACCTACACAACATGCATGCACCTGGTGAAA
CGCATTCCCACTTAAATCCAAACCCCCTCCCATCCAAACCCCCTCCCTCT
TTTCCTCCTCTTCGACCAGGCGTCCTTCACACTACGGGTGGCTATATGAT
TCAAGCCGCGACCACTTTCCGGCATGTATTCAACGTGCGGCCGGAGAAAA
ACGACTTGTTCCTCTGCACTGCCGACTGTAAGTACGGATAGCGTGTGAGA
GCGTCGGTGTACTTTCACATATCACGGACCTTGCCTGCACCTAATCTAAC
CGAGTACAGGTTGGAGGAAGTGGAAGAAATACAAAAGAGCACACACGAGC
AAGTATGGGTGGAGAGATATGTGCGCACGCTTGATCGGAAACGTCATGAT
TACCACATATGGCCAAAATCGTTGTGGTCACTACTAACTGGCTGGTTACT
TAATACCCCTCCTCACTCCCTTTCGGCAGGTGGCTGGATCACGGGTCACT
CCTACGTCACCTATGGCCCCTTGCTCAATGGCGCATCCCAAGTTGTGTTC
GAGGGAGTGCCAAGCTACCCTGACGGTGAGGATGCAGAGGAAGAGGGTTG
GTTGGGAAGATTCTTCCCGGCCGAAAGTGTCGTTGAATTCACTGTCATTT
TTTAACAACCATTGCGACCTCCTGTCTTTTGCCGTCCTTCCATCTCTACA
TTTCAGTCGGACGCCTATGGAATATCGTGGACAAGTACGGCGTCACTCAC
CTCTATACAGCCCCGACCGCTATCCGGTCTCTCATGCGAGAAGGGGATCA
TCACGTCACCAAATACGCGCGAACGAGCCTCAAGGTTTTGGGGTCAGTCG
GCGAGCCTATCAATCCGGAGGCTTGGAAGTGGTACCACGAGGTGGGTGGA
AAGTGAGGAAGGAGGGACAGACGGGCGGGAGGGTTCAGTCCATAGCGAGT
AACTTGATTTAATCCTCTCCGCATTTATCTACAGGTTGTGGGGGGTAGTC
GGTGCCCGATTGTGGACACATGGTGGCAAACTGAGACAGGTAATATTTGA
AATTGGCGTGCGTTCTTGCATGTATTTGCGTGCTTGTGCTTGGTTGATCG
ATCTGATTATTGCGCTCTTACCACACATGGCGTGTCAGATTCATCCTTGC
TACTCGTCGCATACATACGCGCAAGGGAGTCATTCCCGACTATGCACAGT
CCAAAATCACTGCACACACATTCTGCAATACAGGTGCCATCGCTATCGCT
CCCTTGCCCATCAAAGGCTGGGGTCAGAAGCCAGGTAGTGCCTCTTTGCC
TTTCTTCGGCATACAGCCGGTACTCCTGTCGCAAGACGGAAAGGTACGCA
TATGATCCATAGAGCGCATATGATGCATGCGGATGGGAACTAATGTGCGC
AAAAAGCATACGCGGTTACGATGTCCAGTTGCGAAGAGAGGCGAACATTG
AATGTGTGCATCCATCGACTACTCTTGCCTTCTCTTGTCCCTTCCCGCTA
GGAACTTACCGGCGCTACCGAAGGCCTCCTCGCCATCAAATCTCCTTGGC
CAAGCACAATTCGCTCAATCTATGGCGATCACGAACGTATGGAGCAAACA
TATTTCTCCTTCGATGGCTACTACTTGACTGGAGATAACGCACGGTACGG
CAGGAATGCCAGAGGACGGGGTGCAATCAACAGTGTGCGGGGTTGTTAGC
ATCTTCCTACTGACGCCTATTCTAACGCTCCCTGCTACTATCTATTTCTT
TCTCCCTCAGGCGGGACGCAGACGGCTACTACTGGATCACTGGCCGCGCT
GACGATGTAGTCATTGTCTCGGGACACAACCTTGGGACTGCCGAGGTCGA
GTCATCGCTGGTACGTCCCTCTTTCCATCCATCCCTCCTTCCTATCCGTC
CATTCTTCTTATTCCCTACCTTCTTCCTTCCACCCCTTAGGCCCAGCATC
CCCGTGTGGCCGAGGCTGCAGTCGTCGGGATTCCTCATGACATCAAGGGC
AATTGCCTTTACTGCTACGTAACTCTCAAAGCAGGAGAAGAACCCAGTGC
AGAGTTGGCGACTCAGCTGAGAACATTGGTACATGCCCTTTTCTTCCTTT
CCCACCCCCTGTTTACCCTCCTTCTTTCTCCGCTTTCCTCTTCAGTCATA
CTCCTTGTCGCGCGAACTGAGTGAGATATTGCTTCTCCCCTCTCCCTTTT
CCATTTCCCCTACTCCTTAGGTCCGCAACAATCTTGGTGCCTTCGCAGCC
CCTGACTTTATCCAGTGGGCTCCCACTCTGCCCAAGACGCGCTCTGGGAA
GGTAAGAGTGGCCGGAGGGAGGAATAGTGACTCTGACATTAAAAAACGAG
GCATTGATGCGCGTCCATCCAACCCTTCTCCTCTTTCTCCTTCCGCCTAT
ATTCCCTAGGTCATGCGGCGCATTCTCCGAAAGGTGGCAGCCGGCGGTAA
GGCCGTCACCGTGGAGGTAAGGGAGAGGGGAGAAAGGTGGAGGGTAGAGG
AAGGGAAGACACCATGCTGGTAACAACGCACATGATTGAGATTGAAAAAA
TGGAAAACATAAACACCACTTTCGTGCAGAGTCCTTGAAGAAAAAGAAGA
ATCCTTAAAAAAGCCTTTGACTCACCCTCAGTCCCTCTCTCCTCCCTCAC
TTGTGCAGGAACTGGGCGATATGAGCACGCTGGCCGACCCGGATGTAATC
ACTGAATTAATTGCCAACCATGTGTAGAGGAAATGAAAGAGAGAAAGGGG
AATGAAGGGAGGACGACGACGACGACGACGAAGAAGAAGAACTTCCCTTG
CATATGTAGATAAGTAGCGACTACCGATTAGCTGCGAAAGTGAAAAGTGG
GTTTGTGGATGGCGGGAAGGAGAGAAATGACTGAATTGAAGCAAGAAGGA
GGTGGGGGACGATTATGGCAGATATTTACCGAAAAATATTTATTACATAC
AAAATATATAGATGAAAGAAGAAAGAATGAAAAAGGGGGGTTAGA

Coding sequence (CDS) from alignment at chr13:988499..994443-

>NO13G03340.1 ID=NO13G03340.1|Name=NO13G03340.1|organism=Nannochloropsis oceanica|type=CDS|length=2274bp|location=Sequence derived from alignment at chr13:988499..994443- (Nannochloropsis oceanica)
ATGACAAAACGACAATGTAAAACGTGGTATGTCATGAATGGCATCCTTGT
CCTGCACATGGCGGCCATTGGTGTGGCGCAGGCATTCCTGTGCCCCTCCG
CCGCCTTCCCGCCCTCCTTCGTATCTCCTCAACATGGCGCAGCCGTCCGG
CGAGGAGAAGCTAGTTCTTTTCCCCGCCTGTCGTCCTCCCGTCCTTCTTT
CGCGGTCGTAGGAGATGAAACGAAGGATGAAACAGGCCTTCCTTTGGATG
GAAATGAGGTAGAAGAGGTGGTCTTCCACCCTTCGGAAGAGTACTTTGAA
AAAGTGCCGCATCATTACGACAACGTGGAAGATTACCTCGTCCACTACCA
GAAGTCTATCGATGACCCCGCTGCTTTTTGGGCTGATATCGGCCAGGAGT
TTCACTGGGAGAAACCCTGGGAGGAGACGGTCTCGCACAATTTCAACAGG
TCTGCCGGTCCTGTCCATGTCCGTTTTTTCCACGGCGGCGAAACCAACAT
CGCCTACAACGCCCTCGACCGACACGTGGCTGCAGGCCTCGGTGACCGCG
TGGCTTTTCACACGGAGCGAAACGACCTCGAACCCCGCAAGGAGACAGGG
GCGGGCGGTCAAAAAAGCACATATACCTATTTAGAGGCACTTGAAGAGGT
CTCCCGCATTTCCAACGTCTTGAAGTCAATGGGTGTAAGGAAAGGGGACA
AAGTCGGCCTTTTTATTCCGATGGTCGCCGAGCTCCCGCTGGCCATGCTG
GCCTGTGCCCGCATTGGTGCGGTCCACACGGTCGTTTTCGCAGGCTTCTC
CAAAGAGGCTCTCGCTGATCGCCTCTGCGATGCAGAGTGCAAGGTCGTCA
TTGCCTGCGACGGCGTTTTCCGAGGCACGAAGCTTATCCCTCTCTTTCGA
ACGGTCGACGACGCCATCAAGATCTGCAAGGAGCGGGGCCACACCATCGA
GCACTCCTTAGTCTTGGAGCGCCTTGGCGGCGAAGTCGCTGGCGCACAGC
TTACGCCGGGCCGCGACGTCTGGTGGCATGAAGCTGTGGCCGTGGCCCCT
GCAATCTGTCCTGTAGAGTGGGTGCCGTCTGAGCACCCCCTCTTCATCCT
TTACACCAGCGGCTCCACGGGCAAACCCAAAGGCGTCCTTCACACTACGG
GTGGCTATATGATTCAAGCCGCGACCACTTTCCGGCATGTATTCAACGTG
CGGCCGGAGAAAAACGACTTGTTCCTCTGCACTGCCGACTGTGGCTGGAT
CACGGGTCACTCCTACGTCACCTATGGCCCCTTGCTCAATGGCGCATCCC
AAGTTGTGTTCGAGGGAGTGCCAAGCTACCCTGACGTCGGACGCCTATGG
AATATCGTGGACAAGTACGGCGTCACTCACCTCTATACAGCCCCGACCGC
TATCCGGTCTCTCATGCGAGAAGGGGATCATCACGTCACCAAATACGCGC
GAACGAGCCTCAAGGTTTTGGGGTCAGTCGGCGAGCCTATCAATCCGGAG
GCTTGGAAGTGGTACCACGAGGTTGTGGGGGGTAGTCGGTGCCCGATTGT
GGACACATGGTGGCAAACTGAGACAGGTGCCATCGCTATCGCTCCCTTGC
CCATCAAAGGCTGGGGTCAGAAGCCAGGTAGTGCCTCTTTGCCTTTCTTC
GGCATACAGCCGGTACTCCTGTCGCAAGACGGAAAGGAACTTACCGGCGC
TACCGAAGGCCTCCTCGCCATCAAATCTCCTTGGCCAAGCACAATTCGCT
CAATCTATGGCGATCACGAACGTATGGAGCAAACATATTTCTCCTTCGAT
GGCTACTACTTGACTGGAGATAACGCACGGCGGGACGCAGACGGCTACTA
CTGGATCACTGGCCGCGCTGACGATGTAGTCATTGTCTCGGGACACAACC
TTGGGACTGCCGAGGTCGAGTCATCGCTGGCCCAGCATCCCCGTGTGGCC
GAGGCTGCAGTCGTCGGGATTCCTCATGACATCAAGGGCAATTGCCTTTA
CTGCTACGTAACTCTCAAAGCAGGAGAAGAACCCAGTGCAGAGTTGGCGA
CTCAGCTGAGAACATTGGTCCGCAACAATCTTGGTGCCTTCGCAGCCCCT
GACTTTATCCAGTGGGCTCCCACTCTGCCCAAGACGCGCTCTGGGAAGGT
CATGCGGCGCATTCTCCGAAAGGTGGCAGCCGGCGGTAAGGCCGTCACCG
TGGAGGAACTGGGCGATATGAGCACGCTGGCCGACCCGGATGTAATCACT
GAATTAATTGCCAACCATGTGTAG

Synonyms

Publications