NO13G03260.1, NO13G03260.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO13G03260.1
Unique Name	NO13G03260.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3644
Alignment location	chr13:950783..957360 -

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Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr13	genome	chr13:950783..957360 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO13G03260.1 vs.
Match: EWM25069.1 (mannitol 1-phosphate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 348.2 bits (892), Expect = 5.500e-92
Identity = 208/450 (46.22%), Postives = 272/450 (60.44%), Query Frame = 0

Query:  202 RSTFHAHIGAGRLGLGLVVPAIIKSRVPFAIVNHPSKAWDPITHSPSRDPRVSLKVNGEVIAKDLLVVRDLSELPPTNPHSQGNLFVPSDDPLLLHLLVTTASSFSISLGPSMLTVLVPLLSKLPVV-----PAGGFRPCLFAAENDHKMVRRLAKALEGRVDVHEVMVDRICVGRTITTDAIDVQAEPFDGEMVILKRP--KHLVKDLSSLPPSPSLMSSSSSSSSSSSSSSSSSSSPPSTEGCLPFSGDHVRLPSMAAEASMWTRRKFLLVNGTHTTLAFLTLCLRQP---------RQSPDEDETIPGDHELICWDQEKFGKKMYNDIWCWATARVMVLLWEHELDLMKHAFAVPSDDALIDVLLASTVKTLQRFSSIKDTTKRVLAGGVAVRWKGRLNDVREFLSDFNRPPNPITALLLKKAKVTLPGIKKAVRELCEESYRFTGL 636
            R  FH HIGAGRLGLGLV+PA+ +S  P  I+  PS+AW P+  +     R+ + VN E   KD++VVRDL+ELP  +   + NLFV S+DP+LL  LV TA+SFS+SLGP M  V VPLLS LP+      PA    P L+AAENDHKMV  +A+AL GRV+V +VMVDRIC  R I    ++V  EP++GEMV++     KH +      P  P+                             PF G+HVRLPS   +A  +T+RKFLLVNG+HTTLAFLTLCLRQP          + P E  T P DHELI W     G++++ +IW WA AR+++LL      ++  A  V ++DAL +VLLA   +TLQRF+S  D+T RVL GGVA RW+ RL  V  FL    +    + A L++KA ++ P IK+ V  LCE+S+RFTGL
Sbjct:  171 RRGFHLHIGAGRLGLGLVIPAVARSATPLGILQRPSEAWAPLMDTK----RMDVMVNEETAVKDMIVVRDLTELPDWDER-RPNLFVLSEDPILLQTLVRTATSFSMSLGPFMKDV-VPLLSTLPLHGEAEDPADFVLPVLYAAENDHKMVEEVAEALAGRVEVRKVMVDRICTAREIGELRVEVACEPYEGEMVVMAESLGKHGLHQGGETPRLPA-----------------------------PFKGNHVRLPSKQEQAEYFTQRKFLLVNGSHTTLAFLTLCLRQPPAPKKSAAGHEGP-ETYTPPADHELINW--SNCGEQLHQEIWAWAVARLLILLTAFPATVLMEAHDVTTEDALCEVLLAYAEETLQRFASTTDSTARVLQGGVANRWETRLKTVDRFLQPKTK-LRKLKAKLVEKAGLSFPYIKQVVARLCEDSHRFTGL 581

The following BLAST results are available for this feature:

BLAST of NO13G03260.1 vs.

BLAST of NO13G03260.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25069.1	5.500e-92	46.22	mannitol 1-phosphate dehydrogenase [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO13G03260	NO13G03260	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO13G03260.1	NO13G03260.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO13G03260.1.cds1	NO13G03260.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds2	NO13G03260.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds3	NO13G03260.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds4	NO13G03260.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds5	NO13G03260.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds6	NO13G03260.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds7	NO13G03260.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds8	NO13G03260.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds9	NO13G03260.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds10	NO13G03260.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds11	NO13G03260.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds12	NO13G03260.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds13	NO13G03260.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds14	NO13G03260.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds15	NO13G03260.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds16	NO13G03260.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G03260.1.cds17	NO13G03260.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr13:950783..957360-
coding sequence from alignment at chr13:950783..957360-

mRNA sequence

>NO13G03260.1 ID=NO13G03260.1|Name=NO13G03260.1|organism=Nannochloropsis oceanica|type=mRNA|length=3644bp
CTACTTGTTGGTAGTTGTCACTGTGCGGTGGGGAGAAAAAATGGGAGCGG
GGAACAAAGGGATTAAGCATTATTAGTACGGCGTGCGGGAAGACTTTTGT
ATGTTTTTTTTGGGGGGGGGGGGTTAAATGCAAGAAGAACAACGCTGGCA
CCCATTGGGCTGCCCGCTCCCTCTGTGTATCTGTGCGAGTGCGTGCGGGT
GGCGGTCATTGTCGTGTGCATGCGCCTTGAGGCCAGGTTGCAGTCGGTTG
AGGCTTGTCTCATCAGCAGAGTATGTCAGACAGCAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGATGTCGTGCGGATAGGGGGGGGTGTCTCGGTTTAGCG
AGGGGAGGCGGAAAATGGATGGCAGCAGGAAGAGAATAGACGTCAGGATG
CCAGTGGTTCGATGGAGGCCGTCAGAGTAAAGAGCAAGTAGCAAGGCATG
TCCCGCCGTCCTGGGTTTCTCTCTCAAGTTCGTCGGCGTTGCTTCTTTTT
TTGCTTGTTTTCTTGAAAATGAATGCGTGGCGTGCATGCTCACCTCACGC
CCCACGCTACGACCAGGGACACACACGCAAATACACAGGCAGCCTTCACC
AAGGCGTACAGTAATATGTTGCACCAATCGATGGATTACGTTCGTTTTTC
ATCGCCTATTTTATGCTGAGCAAGGACAGGTTGGGGGTTTTGAGAAATTG
GAAGCTCCTCCCCGCTCGCCTGCTGGCTGCGTTTGAAAAAAGAGCGGTCA
CATCGCATGCGTGCCCGCAGCCCACCACAAATGCATTGTCTTCACCACGA
GATTGTCCTGTCTGAGATGAGCATGTGGAGCGGGTGCAGCTTGGCGTGGA
CGCACAATCGTGTGGAGTGTACCGAGGTGGAAGGCCCCGAGAGGGAGCGG
CGCTGGCCATGGGTCGAAATGGTGGATGCCGCCGATCTATGATTCGTGCT
TTCACACTTATCCCATGAACCGAACACCAACTCACACCTGTCTGCACCCA
CCCACACAGACTCAAAGACAGCACCGAGACCTTCAGAAGCAGCACGCGGA
CGGGCAGACAGGACGTGATAAGATAACATGACGTCTCCGACGGATGCTCC
TTCGTCCTCCTCCTCCGCGACCACCAGCCTCCCCAATGGCGGAGGAGTAG
CTACGGCAGCAGCAACACCAGCACCCACTGTTGTGGCGGCAAGCATACCC
GAAAAGCAGGAGGTGGACGAGCAAGTCATGGAGAAGCCCAAGGCAATTAA
GCGAGGCATGGAACCGGCGTTTACCACCCGTCTTCGCACGGCTGCTGTGG
ACGATTACCGGAAAAAATACCAGCGGTTTCGGAGTGGGAAGGCGCATGGG
GCGAGTGGAGAGGGACCGACAGGTCATCGAAGCGGCGAGGAGGAGGAGGA
GGAGGAGGAAGAAGCGAAAGAGGCGGAAGAGATCGACGAAGACACTTCGG
TCTTGGAAGCGGAAAACACGCGGCTCTACCAGAGGGTGGCTGATTTCCGA
CGTCAATATCGAAGCTACCGCGTAGGAGCAGCCAAGGGCGTTCGGAGCGA
CGCCTCGCGCAAGATCACCTTGGAAGAGGCCAAAGTGACTCCTGTGGGTC
AGTTAAGCGCGTTCTTAAGGACACAGGTGGCGCCTTCTTTGGGGACGAGG
AGGGTGGTGAGCACCCTTAATTTCGCGCATCGGTCGACGTTCCATGCCCA
CATTGGCGCTGGGCGGTTGGGCTTAGGGCTGGTGGTGCCGGCCATCATTA
AGAGCCGCGTGCCTTTTGCCATTGTCAACCATCCATCCAAGGCCTGGGAT
CCCATCACTCACTCCCCCTCCCGTGATCCTCGCGTCAGTCTTAAAGTCAA
TGGTGAGGTGATTGCTAAGGATCTGCTGGTGGTGCGCGACCTCTCGGAGC
TTCCCCCGACCAACCCCCACTCGCAAGGGAATCTTTTCGTCCCCTCCGAT
GATCCCCTCCTCCTCCACCTCCTCGTCACCACCGCCTCCTCCTTTTCCAT
ATCCCTCGGCCCGAGCATGCTCACAGTCCTTGTGCCCCTCCTCTCCAAGC
TCCCCGTCGTCCCGGCCGGTGGCTTCCGCCCCTGCCTCTTTGCCGCCGAG
AACGATCACAAGATGGTTCGAAGGCTGGCCAAGGCGCTCGAAGGCCGGGT
CGATGTGCACGAGGTGATGGTCGATCGCATTTGCGTGGGCCGGACCATCA
CCACGGACGCCATTGATGTCCAGGCCGAGCCCTTCGACGGCGAGATGGTC
ATCCTTAAACGCCCGAAGCACCTCGTCAAAGATCTCTCCTCCCTTCCTCC
CTCCCCCAGCCTCATGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCCCCCCCTCCACGGAAGGCTGCTTACCT
TTCTCGGGGGATCACGTCAGGCTACCCTCAATGGCGGCTGAGGCCTCCAT
GTGGACCCGTCGGAAGTTCCTCCTGGTCAACGGCACTCACACCACCCTCG
CCTTCCTCACCCTTTGCCTGCGGCAGCCGCGCCAATCCCCCGACGAGGAC
GAGACGATTCCTGGCGACCACGAGCTCATCTGCTGGGACCAGGAAAAATT
CGGGAAGAAGATGTACAACGACATCTGGTGCTGGGCCACGGCGCGGGTGA
TGGTGCTGTTGTGGGAGCACGAGCTCGATTTGATGAAACATGCCTTCGCT
GTCCCCTCCGATGACGCCCTCATCGATGTCCTCCTGGCCAGCACCGTCAA
GACCCTTCAGCGTTTCTCCTCCATCAAGGACACGACAAAGCGAGTCCTCG
CCGGCGGCGTTGCCGTCCGTTGGAAAGGCCGCCTCAACGACGTACGTGAG
TTTCTCTCGGATTTCAATCGCCCACCGAATCCCATCACAGCCCTGCTCCT
CAAAAAGGCCAAGGTGACCCTCCCAGGCATCAAGAAGGCCGTCCGCGAGC
TGTGCGAGGAGAGCTACCGTTTCACGGGCCTCGGCACTGTTACGCCCAAC
AAACAAGGAAAGGTCGTCTGCACCTAAGCCCGCCCTCCCTCCTTCCCTCC
CTCCCTCCCTCCCTCCCTTGCTATTCCCTCGGTGGCTCCTTTTGCCCCAT
CCCCCCGATAGATATCGAAGTAGATTAGTATATATGCAATTTCAATGTGA
TTATGTGAGTCTTCATGAGCCGAGGGAGGGAAGAGGAAGAGGCGGAACTT
AAACTACATCAAAAATAAGGCTACAAGTAGATGAAGAGGGTGGAAGAGAG
AATTGAGATAAGAATCAGGTGAAGGGAGGAAGGAAAGGAAGAAGAGAGGA
TGAATTTAAAATACACAGATTTTGTTAATGTGAAAATAGAGAGGGTGAGA
AGGGGGGAGGGAGGGGGGGATGGATTGTATGGCGGCAATCAGAAAGCAGA
ACGAGCTTTTAGAAAAGAAAGTACGGCGACAGCGAAGGAAGAAGAGGAGA
GGGGGGAGGAGGAGGAGGAAGTTTAGAAGAAAAAGAAGCTCTAAGAACAG
AAATAGGAACAGAAATGCGGGGAAACAAACGGAAAGGGAGGCGCGGGATA
CATGCCAGTCCTGCGTGGCACTAATGAAAATGGAAAGAAATATATTATAA
AGAAATGACTTGACAAAATAAATTTTAACAATGGTCAGTAAAAG

protein sequence of NO13G03260.1

>NO13G03260.1-protein ID=NO13G03260.1-protein|Name=NO13G03260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=650bp
MTSPTDAPSSSSSATTSLPNGGGVATAAATPAPTVVAASIPEKQEVDEQV
MEKPKAIKRGMEPAFTTRLRTAAVDDYRKKYQRFRSGKAHGASGEGPTGH
RSGEEEEEEEEEAKEAEEIDEDTSVLEAENTRLYQRVADFRRQYRSYRVG
AAKGVRSDASRKITLEEAKVTPVGQLSAFLRTQVAPSLGTRRVVSTLNFA
HRSTFHAHIGAGRLGLGLVVPAIIKSRVPFAIVNHPSKAWDPITHSPSRD
PRVSLKVNGEVIAKDLLVVRDLSELPPTNPHSQGNLFVPSDDPLLLHLLV
TTASSFSISLGPSMLTVLVPLLSKLPVVPAGGFRPCLFAAENDHKMVRRL
AKALEGRVDVHEVMVDRICVGRTITTDAIDVQAEPFDGEMVILKRPKHLV
KDLSSLPPSPSLMSSSSSSSSSSSSSSSSSSSPPSTEGCLPFSGDHVRLP
SMAAEASMWTRRKFLLVNGTHTTLAFLTLCLRQPRQSPDEDETIPGDHEL
ICWDQEKFGKKMYNDIWCWATARVMVLLWEHELDLMKHAFAVPSDDALID
VLLASTVKTLQRFSSIKDTTKRVLAGGVAVRWKGRLNDVREFLSDFNRPP
NPITALLLKKAKVTLPGIKKAVRELCEESYRFTGLGTVTPNKQGKVVCT*

mRNA from alignment at chr13:950783..957360-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO13G03260.1 ID=NO13G03260.1|Name=NO13G03260.1|organism=Nannochloropsis oceanica|type=mRNA|length=6578bp|location=Sequence derived from alignment at chr13:950783..957360- (Nannochloropsis oceanica)
CTACTTGTTGGTAGTTGTCACTGTGCGGTGGGGAGAAAAAATGGGAGCGG
GGAACAAAGGGATTAAGCATTATTAGTACGGCGTGCGGGAAGACTTTTGT
ATGTTTTTTTTGGGGGGGGGGGGTTAAATGCAAGAAGAACAACGCTGGCA
CCCATTGGGCTGCCCGCTCCCTCTGTGTATCTGTGCGAGTGCGTGCGGGT
GGCGGTCATTGTCGTGTGCATGCGCCTTGAGGCCAGGTTGCAGTCGGTTG
AGGCTTGTCTCATCAGCAGAGTATGTCAGACAGCAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGATGTCGTGCGGATAGGGGGGGGTGTCTCGGTTTAGCG
AGGGGAGGCGGAAAATGGATGGCAGCAGGAAGAGAATAGACGTCAGGATG
CCAGTGGTTCGATGGAGGCCGTCAGAGTAAAGAGCAAGTAGCAAGGCATG
TCCCGCCGTCCTGGGTTTCTCTCTCAAGTTCGTCGGCGTTGCTTCTTTTT
TTGCTTGTTTTCTTGAAAATGAATGCGTGGCGTGCATGCTCACCTCACGC
CCCACGCTACGACCAGGGACACACACGCAAATACACAGGCAGCCTTCACC
AAGGCGTACAGTAATATGTTGCACCAATCGATGGATTACGTTCGTTTTTC
ATCGCCTATTTTATGCTGAGCAAGGACAGGTTGGGGGTTTTGAGAAATTG
GAAGCTCCTCCCCGCTCGCCTGCTGGCTGCGTTTGAAAAAAGAGCGGTCA
CATCGCATGCGTGCCCGCAGCCCACCACAAATGCATTGTCTTCACCACGA
GATTGTCCTGTCTGAGATGAGCATGTGGAGCGGGTGCAGCTTGGCGTGGA
CGCACAATCGTGTGGAGTGTACCGAGGTGGAAGGCCCCGAGAGGGAGCGG
CGCTGGCCATGGGTCGAAATGGTGGATGCCGCCGATCTATGATTCGTGCT
TTCACACTTATCCCATGAACCGAACACCAACTCACACCTGTCTGCACCCA
CCCACACAGACTCAAAGACAGCACCGAGACCTTCAGAAGCAGCACGCGGA
CGGGCAGACAGGACGTGATAAGATAACATGACGTCTCCGACGGATGCTCC
TTCGTCCTCCTCCTCCGCGACCACCAGCCTCCCCAATGGCGGAGGAGTAG
CTACGGCAGCAGCAACACCAGCACCCACTGTTGTGGCGGCAAGCATACCC
GAAAAGCAGGAGGTGGACGAGCAAGTCATGGAGAAGCCCAAGGCAATTAA
GCGAGGTAAGCAGGGAGGGAAGAGGAGGGGGGGAGTGGGGGGGAGAGGGG
CAGGATATGAAAATGTAAATACATTGAAGCTGTATTCATTGCCACATTTA
GGGTAGACTAACAATTCCTGAGATCCCTGTATGAGCAGCATGCGTTGCTG
GCACTGGTTGCAGCCCGTCTCCCGTCTCGTGAGCCACAAGTCACCCTCCT
TCCCTCCCTCCTTCCCTCCCTCTATCCCTCCCTCCATCCCAACAGGCATG
GAACCGGCGTTTACCACCCGTCTTCGCACGGCTGCTGTGGACGATTACCG
GAAAAAATACCAGCGGTTTCGGAGTGGGAAGGCGCATGGGGCGAGTGGAG
AGGGACCGACAGGTCATCGAAGTAAGTTAGGAAGGGAGAACGGAGGCAGG
AAGGAAAAGAGGGAAGGAGGGAGGGATGGTGGTTGCTTCCGGTTAATGGG
AATAATCTCCCTCATTTTTACTTACAAATGTGAAAGGTCTTCATTACTTA
TACTGTTACTTATACAAATACCATACATTCATTCACACAAATTGTAACCA
CACCAACGCAGGCGGCGAGGAGGAGGAGGAGGAGGAGGAAGAAGCGAAAG
AGGCGGAAGAGATCGACGAAGACACTTCGGTCTTGGAAGCGGAAAACACG
CGGCTCTACCAGAGGGTGGCTGATTTCCGACGTCAATATCGAAGGTATTT
ACCCTCCCCCCCTCCCTTCCTCCCTCCCTCCCTACGTCTATCTTCCTGTT
TTCGTCCCTCCCCTGGCAAAGAGGTTGAGAGTAGCAGCAGTGAGCTGCCG
ACATGCCTTCTCTTTGCTGTTAATTTCAAATTCTTTATTTTGTTATTGTT
TAAATTCAAATTGAGTACAAGTGAGTCAGACTGGAGTAGGGAGACAATCG
CAGAAGCCCTCACGACCCACCTCCTTCTTTTTCTTCTACTTCTTCTTCTT
CTTTTCTTCTTCTTCTTCTTCTTCTTTTCTTCTTTTTCTTCTTCTCCTTC
TCTTTCTGCTTGTTCTTCTTCTCTTCATTCGTCTCCCTCTCCTTCATCTC
CTCTGACTTTCTCTGTGCTTGTCCCTCCTCCTCCTCCTCCTCCTCCTTCT
CCTTCTCCTCCATCATCACTCCTCCATCTCCATCTCCAGCTACCGCGTAG
GAGCAGCCAAGGGCGTTCGGAGCGACGCCTCGCGCAAGATCACCTTGGAA
GAGGCCAAAGTGACTCCTGTGGGTCAGTTAAGCGCGTTCTTAAGGACACA
GGTGGCGCCTTCTTTGGGGACGAGGAGGGTGGTGAGCACCCTTAATTTCG
CGCATCGGTCGACGTTCCATGCCCACATTGGCGCTGGGCGGTTGGGCTTA
GGTGGGTGGCGTGGAAAGAGGCAGAGGGAGGGAGGGAGGGAAGAAGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAGGGGTTT
ATCCAAAGAATAGGATAAGAGCTTGAGAGATGTCAGCCTTGTCGATGGTC
TCAGAAAGTCGATATATCAGAAAGCCAGTATATCCTCACAGCGCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCACCCCCCTATCCAGGGC
TGGTGGTGCCGGCCATCATTAAGAGCCGCGTGCCTTTTGCCATTGTCAAC
CATCCATCCAAGGCCTGGGATCCCATCACTCACTCCCCCTCCCGGTACGT
CCCCCTTCCTCCCTCCCTCCCTTCCTCCCTCCTTCCCTCCTTCCCTCCCT
TCCTACGATTTCCTCACGTCAACCGCTCAACATCAAGGGCCAAGTGATTG
CACTCATCCTCCTTCCCTCCCTCCCTTCCTCCCCCCTGCCTCCCTTCCTT
CCCTCCATAGTGATCCTCGCGTCAGTCTTAAAGTCAATGGTGAGGTGATT
GCTAAGGATCTGCTGGTGGTGCGCGACCTCTCGGTACGTCCCTCCCTCCT
TCCCTCCTTCCCTCTCTCTCTCCTTCCTTATGCTATTTCCCCTCTTCCTC
TGGAAGAGGACGATCCTTCTGTGTCGCCGTCCCTCCCTCCCTCCCTCCCT
TCCCTCCTCCCTCCCCACCCTTCATGGACACCTACTGCCGAAGCAAGTAC
TCAACACTCCCTCCCTCCCTCCCTCCCTCCCTCAGGAGCTTCCCCCGACC
AACCCCCACTCGCAAGGGAATCTTTTCGTCCCCTCCGATGATCCCCTCCT
CCTCCACCTCCTCGTCACCACCGCCTCCTCCTTTTCCATATCCCTCGGTA
ACCCTCCTCCCTCCCTCCCTTCCAAGCGCCTGTCGATCGCTTCCACCCAT
CCCTCCCTCCCCCTCGTCCTCAGGCCCGAGCATGCTCACAGTCCTCGTGC
CCCTCCTTTCCAAGCTCCCTCTCACCCCTCCTTCCCCCCTCCCTCCCCCT
GGTCCTCAGGCCCGAGCATGCTCACAGTCCTTGTGCCCCTCCTCTCCAAG
CTCCCCGTCGTCCCGGCCGGTGGCTTCCGCCCCTGCCTCTTTGCCGCCGA
GAACGATCACAAGGTACTGCCCCTCCCTCCCTCCCTCTCTCCCTCTCTCC
CTCCCTCCCATCATCCTTCCATACTTACCATTCCTCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCCCTCAGATGGTTCGAAGGCTGGCCAAGGCGCTCGAA
GGCCGGGTCGATGTGCACGGTCCGTCCTTGCCCTCCCTTCCTCCTTCCCT
CCCTACCTCCCTCTCACTTTATTCGCCCTGAATTAATCTTTCCCTCCCTC
CCTCCTTCCCTCCCTCCTTCCATCCAGAGGTGATGGTCGATCGCATTTGC
GTGGGCCGGACCATCACCACGGACGCCATTGATGTACGTAAGCAAGCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCATCGTTTCCC
TTGATATTTAACCAGCTCTTCTATCTTCCTCCCTTACCCTCCTCCTTCCC
TTCCTTCTTCCTAACCCTTATGTGTTCTTCCTTCCAATCAGCTCACCCTC
CCCTCCCCCCCTCGCTCCCTCCCTCCAGGTCCAGGCCGAGCCCTTCGACG
GCGAGATGGTCATCCTTAAACGCCCGAAGCACCTCGTCAAAGATCTCTCC
TCCCTTCCTCCCTCCCCCAGCCTCATGTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCCCCTCCACGGAAG
GCTGCTTACCTTTCTCGGGGGATCACGTCAGGCTACCCTCAATGGCGGCT
GAGGTACACCCTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCTCCCTCC
CTACCTCGCTCTCTTGCTCCATCCCTCTCCTTCCTCTCCTTTCCACTTAT
CTCCTTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGAGGCCTCCA
TGTGGACCCGTCGGAAGTTCCTCCTGGTCAACGGCACTCACACCACCCTC
GCCTTCCTCACCCTTTGCCTGCGGCAGCCGCGCCAATCCCCCGACGAGGT
ACGACAAACACCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCCCCGGACGATCTTTTATGGTGCGCTCCCTCCCCTTGGGAT
CGACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCAGGACGAGACGATTCCTGGCGACCACGAGCTCATCT
GCTGGGACCAGGAAAAATTCGGGAAGAAGGTACGCCCTCCCTCCCTCCCT
TCCTCCCTCCCTTCCTTCCTCCCTTCGTTCCCTCTCGCCCTTTTTCTCCC
CCCCCCCTTTCTCTTCCTTCCTCCCTCCCTCCCTCCTCCTCAGATGTACA
ACGACATCTGGTGCTGGGCCACGGCGCGGGTGATGGTGCTGTTGTGGGAG
CACGAGCTCGATTTGATGAAACATGCCTTCGCTGTCCCCTCCGATGACGC
CCTCATCGATGTCCTCCTGGCCAGCACCGTCAAGACCCTTCAGGTCCGCC
CTCTCTCCCTCCCACCCTCCCTCTCATTGTTTCTCTCATTGCCATCCGTT
GATCGAATCTAACCGTCGCCCAACGTCCTCCCTCTCTCCCTCCCTCCCTC
CCCTCCTTCCTCCTTCCCTCCCTCAGCGTTTCTCCTCCATCAAGGACACG
ACAAAGCGAGTCCTCGCCGGCGGCGTTGCCGTCCGTTGGAAAGGTAAACC
CCTCCCATCCTCCCTCCTTCCCTCTCTCCCTCCCTCCCTCCCTCCCTCCC
TTCCTCCCTCCCTCCCTCCTTCCTTCCTTCCCTATCAACCTCACCACCCT
CCCTCCCTCCCTCCCTCCGTCCCTCAGGCCGCCTCAACGACGTACGTGAG
TTTCTCTCGGATTTCAATCGCCCACCGAATCCCATCACAGCCCTGCTCCT
CAAAAAGGCCAAGGTACGCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CTCTCTTTCCCTCTCTCTCTCCCTCCCTCCCTCCCTCTTATCGAGCCATC
CCTCCTATAGCCCTGGCCAGGCACAAGCGACACAAGAGAGCGATCGATGC
CGTCCCTCCCTCATGCCTCCCACCCCTCTCTCTCCCCCTCTCTCCAGGTG
ACCCTCCCAGGCATCAAGAAGGCCGTCCGCGAGCTGTGCGAGGAGAGCTA
CCGTTTCACGGGCCTCGGCACTGTTACGCCCAACAAACAAGGAAAGGTCG
TCTGCACCTAAGCCCGCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCC
CTTGCTATTCCCTCGGTGGCTCCTTTTGCCCCATCCCCCCGATAGATATC
GAAGTAGATTAGTATATATGCAATTTCAATGTGATTATGTGAGTCTTCAT
GAGCCGAGGGAGGGAAGAGGAAGAGGCGGAACTTAAACTACATCAAAAAT
AAGGCTACAAGTAGATGAAGAGGGTGGAAGAGAGAATTGAGATAAGAATC
AGGTGAAGGGAGGAAGGAAAGGAAGAAGAGAGGATGAATTTAAAATACAC
AGATTTTGTTAATGTGAAAATAGAGAGGGTGAGAAGGGGGGAGGGAGGGG
GGGATGGATTGTATGGCGGCAATCAGAAAGCAGAACGAGCTTTTAGAAAA
GAAAGTACGGCGACAGCGAAGGAAGAAGAGGAGAGGGGGGAGGAGGAGGA
GGAAGTTTAGAAGAAAAAGAAGCTCTAAGAACAGAAATAGGAACAGAAAT
GCGGGGAAACAAACGGAAAGGGAGGCGCGGGATACATGCCAGTCCTGCGT
GGCACTAATGAAAATGGAAAGAAATATATTATAAAGAAATGACTTGACAA
AATAAATTTTAACAATGGTCAGTAAAAG

Coding sequence (CDS) from alignment at chr13:950783..957360-

>NO13G03260.1 ID=NO13G03260.1|Name=NO13G03260.1|organism=Nannochloropsis oceanica|type=CDS|length=1950bp|location=Sequence derived from alignment at chr13:950783..957360- (Nannochloropsis oceanica)
ATGACGTCTCCGACGGATGCTCCTTCGTCCTCCTCCTCCGCGACCACCAG
CCTCCCCAATGGCGGAGGAGTAGCTACGGCAGCAGCAACACCAGCACCCA
CTGTTGTGGCGGCAAGCATACCCGAAAAGCAGGAGGTGGACGAGCAAGTC
ATGGAGAAGCCCAAGGCAATTAAGCGAGGCATGGAACCGGCGTTTACCAC
CCGTCTTCGCACGGCTGCTGTGGACGATTACCGGAAAAAATACCAGCGGT
TTCGGAGTGGGAAGGCGCATGGGGCGAGTGGAGAGGGACCGACAGGTCAT
CGAAGCGGCGAGGAGGAGGAGGAGGAGGAGGAAGAAGCGAAAGAGGCGGA
AGAGATCGACGAAGACACTTCGGTCTTGGAAGCGGAAAACACGCGGCTCT
ACCAGAGGGTGGCTGATTTCCGACGTCAATATCGAAGCTACCGCGTAGGA
GCAGCCAAGGGCGTTCGGAGCGACGCCTCGCGCAAGATCACCTTGGAAGA
GGCCAAAGTGACTCCTGTGGGTCAGTTAAGCGCGTTCTTAAGGACACAGG
TGGCGCCTTCTTTGGGGACGAGGAGGGTGGTGAGCACCCTTAATTTCGCG
CATCGGTCGACGTTCCATGCCCACATTGGCGCTGGGCGGTTGGGCTTAGG
GCTGGTGGTGCCGGCCATCATTAAGAGCCGCGTGCCTTTTGCCATTGTCA
ACCATCCATCCAAGGCCTGGGATCCCATCACTCACTCCCCCTCCCGTGAT
CCTCGCGTCAGTCTTAAAGTCAATGGTGAGGTGATTGCTAAGGATCTGCT
GGTGGTGCGCGACCTCTCGGAGCTTCCCCCGACCAACCCCCACTCGCAAG
GGAATCTTTTCGTCCCCTCCGATGATCCCCTCCTCCTCCACCTCCTCGTC
ACCACCGCCTCCTCCTTTTCCATATCCCTCGGCCCGAGCATGCTCACAGT
CCTTGTGCCCCTCCTCTCCAAGCTCCCCGTCGTCCCGGCCGGTGGCTTCC
GCCCCTGCCTCTTTGCCGCCGAGAACGATCACAAGATGGTTCGAAGGCTG
GCCAAGGCGCTCGAAGGCCGGGTCGATGTGCACGAGGTGATGGTCGATCG
CATTTGCGTGGGCCGGACCATCACCACGGACGCCATTGATGTCCAGGCCG
AGCCCTTCGACGGCGAGATGGTCATCCTTAAACGCCCGAAGCACCTCGTC
AAAGATCTCTCCTCCCTTCCTCCCTCCCCCAGCCTCATGTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCC
CCTCCACGGAAGGCTGCTTACCTTTCTCGGGGGATCACGTCAGGCTACCC
TCAATGGCGGCTGAGGCCTCCATGTGGACCCGTCGGAAGTTCCTCCTGGT
CAACGGCACTCACACCACCCTCGCCTTCCTCACCCTTTGCCTGCGGCAGC
CGCGCCAATCCCCCGACGAGGACGAGACGATTCCTGGCGACCACGAGCTC
ATCTGCTGGGACCAGGAAAAATTCGGGAAGAAGATGTACAACGACATCTG
GTGCTGGGCCACGGCGCGGGTGATGGTGCTGTTGTGGGAGCACGAGCTCG
ATTTGATGAAACATGCCTTCGCTGTCCCCTCCGATGACGCCCTCATCGAT
GTCCTCCTGGCCAGCACCGTCAAGACCCTTCAGCGTTTCTCCTCCATCAA
GGACACGACAAAGCGAGTCCTCGCCGGCGGCGTTGCCGTCCGTTGGAAAG
GCCGCCTCAACGACGTACGTGAGTTTCTCTCGGATTTCAATCGCCCACCG
AATCCCATCACAGCCCTGCTCCTCAAAAAGGCCAAGGTGACCCTCCCAGG
CATCAAGAAGGCCGTCCGCGAGCTGTGCGAGGAGAGCTACCGTTTCACGG
GCCTCGGCACTGTTACGCCCAACAAACAAGGAAAGGTCGTCTGCACCTAA

Synonyms

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