NO13G01780.2, NO13G01780.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO13G01780.2
Unique NameNO13G01780.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3488
Alignment locationchr13:521299..525576 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:521299..525576 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
[Close]
BLAST of NO13G01780.2 vs.
Match: EWM21854.1 (mismatch repair protein 5 [Nannochloropsis gaditana])

HSP 1 Score: 1094.3 bits (2829), Expect = 0.000e+0
Identity = 594/920 (64.57%), Postives = 709/920 (77.07%), Query Frame = 0 
Query:   41 VGSDFRETVQALKLHLGPTSFLIDAYLLADEDFCKLLGCAISEDRPQFYIKVAKARNWDLRRAITQLCTCLEVRELAEASRTKVEDREDGLMLQNLISGSRGGGR-----EGGAGAG---GLDPRRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGG-------------AARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRQQQEGRGKSEKEKANEEGEEGEQQQQERRQKRRPEGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPPPAPSSNP-----PSTSSS--GSSSIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEGTLSIHPLPRPLSWRKEGGGEKEEEKEAEEAGKGEEEEGGKGGREVLRYNKEAQEVLRAFMAVEDWTECGEKETQQFVELLQKV 933
            V +D RETVQALK+HLGPTSFLIDA+LLADE FCKLLG ++SEDRPQF+++VAKAR+WD RRA++QLC CL+VR+LA+   ++       L  + L + S          + G+G G   GLDPRRNYDRLSCVIDF+ E LLVKALGALL+HLQ   F LE+ GRV V  L RFDL  FV LD+NAL SLQIFHEEKHPNVI+GRGKAKEGFSLF+LLDQT S PGRK LKEWMLRPLR V  I ERQ MVELLL  EAMEVV NAG LLG+VGD+ R+L R++RAG+TVNDWLTLANTA+H+LLLQ+CL VL H+  R     + G    G             A  +++G L+RIS +AV RV E +T V+DLEIT+ESK +AVR GCD ELDRLR +YD LEEFLS EAR VLAEQ+S+LLS +SVQFLPQVGFLVIVQA+E++AVE DPRFRFVFAEG+++YYKTPRMDVLDDSIGDL+AAI DRE  LLR + EE+LKEE  L EAVRACAE+DVL++FAQ+AGGLAWV+PM+TE++VVVVKDGRHPLQEL VE FIPNDVFL+G  G +  R                +G + +  Q++  +     G RG+AVVTGPNFSGKSVYIK VGVL YLAHLGCFLPC+QALIG+VD I TRIASAETVTVQQS+FTIDCSQMNAVF+NA+PSSL+LVDEFGKGSAETDGLALLVACLSRL  LGAR LVTTHFLELFQRKGLLSP LA +ISYRMD+FVPP  P ++P     P+T++S   +++I T+VPLFKLTKGVA+SSDGFSCA LAGLA  L+KRAE +A+  VEG++ I PL RP+++R  GG E E+E++ +             GREVLR+N +AQE L  F+ VEDW    +++ Q F+ELL++V
Sbjct:   48 VSTDIRETVQALKMHLGPTSFLIDAHLLADEGFCKLLGSSVSEDRPQFHVRVAKARDWDTRRAVSQLCHCLDVRQLAKGPHSRNRGHAIYLRNERLATSSEAASSPFFMDDKGSGQGRDEGLDPRRNYDRLSCVIDFMSENLLVKALGALLVHLQCTTFQLEIGGRVTVQTLERFDLGSFVHLDSNALTSLQIFHEEKHPNVISGRGKAKEGFSLFALLDQTHSLPGRKCLKEWMLRPLRSVRGIRERQNMVELLLHPEAMEVVTNAGMLLGKVGDIQRILTRMRRAGSTVNDWLTLANTAEHILLLQSCLAVLAHLTARLSSASDKGPTTAGEEEHRTNEGSYSSAMAMLQGFLDRISRQAVGRVSEALTKVLDLEITRESKSMAVRLGCDEELDRLRGDYDGLEEFLSEEARGVLAEQSSQLLSKISVQFLPQVGFLVIVQANERIAVENDPRFRFVFAEGDALYYKTPRMDVLDDSIGDLSAAIQDREGLLLRQLAEEILKEETALAEAVRACAELDVLMAFAQLAGGLAWVRPMVTEERVVVVKDGRHPLQELTVETFIPNDVFLMGGDGNAVHR----------------DGGDEKHAQKQGLEHCNQHGTRGVAVVTGPNFSGKSVYIKMVGVLVYLAHLGCFLPCRQALIGVVDSIRTRIASAETVTVQQSSFTIDCSQMNAVFQNASPSSLVLVDEFGKGSAETDGLALLVACLSRLQRLGARALVTTHFLELFQRKGLLSPQLANDISYRMDIFVPPLPPPTSPSVSSSPATAASTPSAANIHTIVPLFKLTKGVASSSDGFSCAALAGLAPSLIKRAEQIAKYHVEGSMKIEPLARPIAFR--GGSENEKEEKNQ-------------GREVLRFNLQAQEALELFLGVEDWLLKKDQDLQGFIELLEQV 936
The following BLAST results are available for this feature:
BLAST of NO13G01780.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM21854.10.000e+064.57mismatch repair protein 5 [Nannochloropsis gaditan... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01780NO13G01780Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO13G01780.2NO13G01780.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO13G01780.2.cds1NO13G01780.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G01780.2.cds2NO13G01780.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G01780.2.cds3NO13G01780.2.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G01780.2.cds4NO13G01780.2.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G01780.2.cds5NO13G01780.2.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G01780.2.cds6NO13G01780.2.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G01780.2.cds7NO13G01780.2.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO13G01780.2 ID=NO13G01780.2|Name=NO13G01780.2|organism=Nannochloropsis oceanica|type=mRNA|length=3488bp
CTCGAGACTGTAGTGGTGGAGGATAAGGACGTGTGGTGTTAAGTTGATGC
CTTGATGGGCTCTGAAAACCTCCTGTCTCAAGCGAAGAGCACAAGAAGTG
CACTCTTTATTAATGCAAATCTCATCCACTGCCCTGCTTTGCGACATCAT
TTCACACAGCAACACTACCCTGCTTGTGTGCCCAGGCCTCATCAAGCGGC
TCTCGTCAACGTCCGTGAGCAACATCGCTGACTCCTCTCGCTGCAGCCCC
ACTACCTCCATCTTCCCTTCTCCTCTCTTTCTTCTACGTCCCACTCACTC
ACTCCTCACGCCACCAACACCCACGATACGCACAGCTTAGCATATAAATA
TAAATATATCAACGATATGACCATGCAACCGAAGAAGAAGGGGGCGTTGG
GACGAACATCAACGGCGAAAAGCAAGGAGGAACGGATGGGAGCGTACGGA
AATAAATACGAGGAGGAGGAGGAGGAGGAAAACGACGAGGAGGAGGACGA
GGAGGATAGGCAGGGCGGTGGCGCGCCTTGGTGTCGACAGAATCCTGCAG
TAGGAGGAAGAGGAGACGATGGCGTGCCCATGGCTGTAGCGCGCCAGGCC
AATAAACTTGGTTACGCGTGCTTTGACGAGGAACGGAGCACCATTTACGT
CAACGAGCTGCTGGGTGAGTCATCGAAATAAAGAAGCGCATGGGGAAGCG
TGGGAGGGGGAGAATATCTAAGGCGTACCTGGCCCAGTGTCACGTCTCGC
GTCAGACATTCATCTGCCTCACCTCGTCCTTCCCTATTTATTTCCCTCTC
CTCCACACAGTGGGCTCCGACTTCCGGGAGACGGTCCAAGCCCTCAAGCT
GCACCTCGGCCCCACTTCCTTCCTCATCGATGCATACCTTCTCGCCGACG
AAGACTTTTGCAAGCTCCTGGGGTGCGCCATCTCGGAGGATCGCCCCCAA
TTTTACATTAAGGTGGCCAAGGCTCGCAACTGGGATTTGCGACGTGCCAT
CACTCAGCTGTGCACCTGCTTGGAAGTCCGGGAGCTTGCTGAAGCCAGCC
GAACGAAAGTTGAAGATAGGGAAGACGGGCTGATGCTCCAAAACCTTATC
TCTGGAAGCCGGGGAGGAGGGCGAGAGGGCGGAGCAGGAGCTGGAGGGTT
AGATCCACGAAGGAATTACGACCGATTGAGTTGTGTGATCGACTTTCTGG
AGGAGCCGCTTTTGGTGAAGGCTTTGGGCGCCTTGCTGATTCATTTGCAG
GGGCGTGTGTTTTCGCTTGAGATGGCGGGAAGGGTGCCGGTGGGGAGGCT
GAGGAGGTTCGACCTTGCGGGGTTTGTGAGGCTGGACAATAACGCCTTGA
TGAGCTTGCAGATTTTTCATGAGGAGAAACATCCGAATGTGATCAATGGG
AGGGGGAAGGCGAAGGAGGGGTTTTCGTTGTTTAGTTTGTTGGATCAGAC
GAGGAGCAGGCCGGGGAGGAAGGTTTTGAAGGAGTGGATGTTGCGGCCTT
TGCGTTGTGTGGAAAAGATAGAGGAGAGGCAGATGATGGTTGAATTGTTG
CTGCAAGGGGAGGCGATGGAGGTGGTGAACAATGCGGGGCGGTTGCTCGG
GAGGGTGGGGGATGTGGGCAGGGTGCTATTGAGGGTGAAGAGGGCTGGAG
CCACGGTGAACGATTGGCTGACGCTCGCGAATACGGCTCAACATGTTTTG
CTCCTACAAAACTGCCTAATCGTGCTTGGCCACGTGGCAATCCGGCAGGA
AAGAGTGGTGGAGGGGGGGAAGGAGGAGGGAGGGGCTGCCCGGGTGGTGC
GGGGGGTCTTGGAACGGATTTCGGGGGAGGCAGTGAGGAGGGTGCAAGAG
GTGGTTACTTGTGTCGTTGATCTGGAGATCACGAAGGAGAGTAAGGTGGT
GGCGGTGAGGACCGGCTGTGATGCCGAGTTGGATCGGCTTAGGGCAGAGT
ACGACAATTTGGAGGAGTTTTTGAGTGGGGAGGCACGAGATGTTTTGGCG
GAGCAGGCGTCGCGCTTGCTATCCACGGTGTCGGTGCAGTTTCTGCCTCA
GGTCGGCTTCCTGGTCATCGTGCAAGCCAGTGAGAAAGTGGCCGTGGAGA
CCGACCCGCGCTTCCGTTTTGTCTTTGCCGAGGGCGAGTCGGTGTACTAC
AAAACCCCGCGGATGGACGTGCTGGACGACAGCATCGGCGACTTGGCTGC
GGCGATCCACGACCGAGAGGCGACGTTGCTCCGAGCGGTGGGAGAAGAGG
TGTTGAAAGAGGAAGTCCCACTCACAGAGGCAGTGCGTGCCTGCGCAGAG
GTCGATGTGCTCCTGTCCTTCGCCCAGGTCGCGGGGGGATTGGCCTGGGT
GAAGCCCATGATCACGGAGGACAAGGTGGTGGTCGTCAAAGATGGAAGGC
ACCCCTTGCAGGAACTGGCCGTGGAAGTCTTCATCCCCAATGATGTCTTT
CTGGTCGGCAAGGGCGGGGAGTCATCCGACAGGCAGCAGCAGGAGGGAAG
GGGAAAAAGCGAAAAGGAGAAGGCGAATGAAGAGGGGGAGGAGGGTGAGC
AGCAGCAGCAGGAGAGGCGGCAGAAGCGGCGGCCGGAGGGAGGGCGAGGC
CTGGCAGTCGTGACCGGTCCCAACTTCTCGGGGAAGAGTGTGTATATTAA
GACGGTGGGCGTGCTGACTTACCTCGCCCACCTTGGGTGCTTCCTGCCGT
GCCAGCAAGCCTTGATTGGGCTGGTGGACGGGATCTACACCAGGATTGCG
AGTGCTGAGACGGTGACAGTGCAGCAAAGTACCTTTACCATAGATTGCAG
TCAAATGAACGCTGTCTTTCGGAATGCCACCCCCTCCTCCCTCATCCTAG
TGGACGAATTTGGCAAAGGGTCCGCCGAGACCGACGGCCTGGCTCTGCTG
GTCGCCTGCCTCTCCCGCCTGCATATCCTGGGTGCCCGCACGCTTGTCAC
GACGCATTTTCTCGAGCTCTTTCAACGCAAGGGCCTCCTCTCCCCTCACC
TCGCCTACGAGATATCTTACCGCATGGACGTGTTTGTACCGCCCCCCGCT
CCCTCCTCTAACCCTCCCTCTACGAGCAGCAGTGGAAGCAGCAGCATTCA
GACAGTCGTCCCTTTGTTCAAGCTGACGAAAGGCGTCGCTACTTCTTCTG
ACGGTTTTTCGTGCGCAGTTCTAGCAGGGCTTGCCTCACCTTTGGTGAAA
CGAGCGGAGCACGTCGCGCGTTGTCTCGTGGAGGGTACTCTGTCGATTCA
TCCCCTTCCTCGTCCTCTTTCGTGGAGGAAGGAGGGAGGGGGGGAGAAGG
AGGAGGAAAAGGAGGCGGAGGAGGCGGGAAAGGGGGAGGAGGAGGAGGGA
GGGAAGGGGGGGCGGGAGGTATTGCGGTATAATAAGGAGGCGCAAGAGGT
GCTTAGAGCGTTTATGGCGGTGGAGGACTGGACGGAGTGTGGGGAGAAAG
AGACGCAACAGTTTGTGGAGTTGCTTCAGAAAGTGTAG
back to top

protein sequence of NO13G01780.2

>NO13G01780.2-protein ID=NO13G01780.2-protein|Name=NO13G01780.2|organism=Nannochloropsis oceanica|type=polypeptide|length=933bp
MGKRGRGRISKAYLAQCHVSRQTFICLTSSFPIYFPLLHTVGSDFRETVQ
ALKLHLGPTSFLIDAYLLADEDFCKLLGCAISEDRPQFYIKVAKARNWDL
RRAITQLCTCLEVRELAEASRTKVEDREDGLMLQNLISGSRGGGREGGAG
AGGLDPRRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVP
VGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSL
LDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAG
RLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVA
IRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTCVVDLEITKE
SKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQ
FLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESVYYKTPRMDVLDDSIG
DLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGG
LAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRQQ
QEGRGKSEKEKANEEGEEGEQQQQERRQKRRPEGGRGLAVVTGPNFSGKS
VYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFT
IDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGAR
TLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPPPAPSSNPPSTSSSGS
SSIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEGT
LSIHPLPRPLSWRKEGGGEKEEEKEAEEAGKGEEEEGGKGGREVLRYNKE
AQEVLRAFMAVEDWTECGEKETQQFVELLQKV*
back to top

mRNA from alignment at chr13:521299..525576-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO13G01780.2 ID=NO13G01780.2|Name=NO13G01780.2|organism=Nannochloropsis oceanica|type=mRNA|length=4278bp|location=Sequence derived from alignment at chr13:521299..525576- (Nannochloropsis oceanica)
CTCGAGACTGTAGTGGTGGAGGATAAGGACGTGTGGTGTTAAGTTGATGC
CTTGATGGGCTCTGAAAACCTCCTGTCTCAAGCGAAGAGCACAAGAAGTG
CACTCTTTATTAATGCAAATCTCATCCACTGCCCTGCTTTGCGACATCAT
TTCACACAGCAACACTACCCTGCTTGTGTGCCCAGGCCTCATCAAGCGGC
TCTCGTCAACGTCCGTGAGCAACATCGCTGACTCCTCTCGCTGCAGCCCC
ACTACCTCCATCTTCCCTTCTCCTCTCTTTCTTCTACGTCCCACTCACTC
ACTCCTCACGCCACCAACACCCACGATACGCACAGCTTAGCATATAAATA
TAAATATATCAACGATATGACCATGCAACCGAAGAAGAAGGGGGCGTTGG
GACGAACATCAACGGCGAAAAGCAAGGAGGAACGGATGGGAGCGTACGGA
AATAAATACGAGGAGGAGGAGGAGGAGGAAAACGACGAGGAGGAGGACGA
GGAGGATAGGCAGGGCGGTGGCGCGCCTTGGTGTCGACAGAATCCTGCAG
TAGGAGGAAGAGGAGACGATGGCGTGCCCATGGCTGTAGCGCGCCAGGCC
AATAAACTTGGTTACGCGTGCTTTGACGAGGAACGGAGCACCATTTACGT
CAACGAGCTGCTGGGTGAGTCATCGAAATAAAGAAGCGCATGGGGAAGCG
TGGGAGGGGGAGAATATCTAAGGCGTACCTGGCCCAGTGTCACGTCTCGC
GTCAGACATTCATCTGCCTCACCTCGTCCTTCCCTATTTATTTCCCTCTC
CTCCACACAGTGGGCTCCGACTTCCGGGAGACGGTCCAAGCCCTCAAGCT
GCACCTCGGCCCCACTTCCTTCCTCATCGATGCATACCTTCTCGCCGACG
AAGACTTTTGCAAGCTCCTGGGGTGCGCCATCTCGGAGGATCGCCCCCAA
TTTTACATTAAGGTGGCCAAGGCACGTACGCATCCTCCTCCTCCCATCGT
ACCCTCCCTTCCTACATTTGCAATCCTTCCTCACTAACCCTCCCTCTCCA
TCCCCATCAGGCTCGCAACTGGGATTTGCGACGTGCCATCACTCAGCTGT
GCACCTGCTTGGAAGTCCGGGAGCTTGCTGAAGCCAGCCGAACGAAAGTT
GAAGATAGGGAAGACGGGCTGATGCTCCAAAACCTTATCTCTGGAAGCCG
GGGAGGAGGGCGAGAGGGCGGAGCAGGAGCTGGAGGGTTAGATCCACGAA
GGAATTACGACCGATTGAGTTGTGTGATCGACTTTCTGGAGGAGCCGCTT
TTGGTGAAGGCTTTGGGCGCCTTGCTGATTCATTTGCAGGGGCGTGTGTT
TTCGCTTGAGATGGCGGGAAGGGTGCCGGTGGGGAGGCTGAGGAGGTTCG
ACCTTGCGGGGTTTGTGAGGCTGGACAATAACGCCTTGATGAGCTTGCAG
ATTTTTCATGAGGAGAAACATCCGAATGTGATCAATGGGAGGGGGAAGGC
GAAGGAGGGGTTTTCGTTGTTTAGTTTGTTGGATCAGACGAGGAGCAGGC
CGGGGAGGAAGGTTTTGAAGGAGTGGATGTTGCGGCCTTTGCGTTGTGTG
GAAAAGATAGAGGAGAGGCAGATGATGGTTGAATTGTTGCTGCAAGGGGA
GGCGATGGAGGTGGTGAACAATGCGGGGCGGTTGCTCGGGAGGGTGGGGG
ATGTGGGCAGGGTGCTATTGAGGGTGAAGAGGGCTGGAGCCACGGTGAAC
GATTGGCTGACGCTCGCGAATACGGCTCAACATGTTTTGCTCCTACAAAA
CTGCCTAATCGTGCTTGGCCACGTGGCAATCCGGCAGGAAAGAGTGGTGG
AGGGGGGGAAGGAGGAGGGAGGGGCTGCCCGGGTGGTGCGGGGGGTCTTG
GAACGGATTTCGGGGGAGGCAGTGAGGAGGGTGCAAGAGGTGGTTACTTG
TGTCGTTGATCTGGAGATCACGAAGGAGAGTAAGGTGGTGGCGGTGAGGA
CCGGCTGTGATGCCGAGTTGGATCGGCTTAGGGCAGAGTACGACAATTTG
GAGGAGTTTTTGAGTGGGGAGGCACGAGATGTTTTGGCGGAGCAGGCGTC
GCGCTTGCTATCCACGGTGTCGGTGCAGTTTCTGCCTCAGGTAGGCCATG
CTCTTTTTTTCGCATTTCTTTCTACTTTGATCTTGAATCGTTTTCACCGG
AAACCCTTTCTTTTCACTCCCCCTCCCTCCCTCCCTCCCTCTTCCTCACC
TCCCTCCCTCCCTCCCCTCCCCTAGGTCGGCTTCCTGGTCATCGTGCAAG
CCAGTGAGAAAGTGGCCGTGGAGACCGACCCGCGCTTCCGTTTTGTCTTT
GCCGAGGGCGAGTCGGTGTACTACAAAACCCCGCGGATGGACGTGCTGGA
CGACAGCATCGGCGACTTGGCTGCGGCGATCCACGACCGAGAGGCGACGT
TGCTCCGAGCGGTGGGAGAAGAGGTAGGTGAGGGAGGGAGAGAGAGAAGG
AGGGAGTGAGGAAAGGAGGAGAGCCGAGATAGATCATCCAGCCTAACCAT
CCCTCCCCCCCTCTCTGCCGTCTTCCCCGCGCAGGTGTTGAAAGAGGAAG
TCCCACTCACAGAGGCAGTGCGTGCCTGCGCAGAGGTCGATGTGCTCCTG
TCCTTCGCCCAGGTCGCGGGGGGATTGGCCTGGGTGAAGCCCATGATCAC
GGAGGACAAGGTGGTGGTCGTCAAAGATGGAAGGCACCCCTTGCAGGTAG
GGAAGGAAGGAGGGCTTGTCTTCTCCCAAGGGGAGGTTGGGGTGGTACCA
CTCGGAGGGTGACGGAGACGACGTGGATGCAGAACCTTGAGGGTCATCGA
CGACGTCTGCGCCCCATGAGGGTACGCGTGCCCTCCTTCTTTAATTTCCT
TCCTCCAGTTATATCTTCTTTCCTACGTACTTCTTCCTTCCTCCTGCCTC
CCTCCCCGCAGGAACTGGCCGTGGAAGTCTTCATCCCCAATGATGTCTTT
CTGGTCGGCAAGGGCGGGGAGTCATCCGACAGGCAGCAGCAGGAGGGAAG
GGGAAAAAGCGAAAAGGAGAAGGCGAATGAAGAGGGGGAGGAGGGTGAGC
AGCAGCAGCAGGAGAGGCGGCAGAAGCGGCGGCCGGAGGGAGGGCGAGGC
CTGGCAGTCGTGACCGGTCCCAACTTCTCGGGGAAGAGTGTGTATATTAA
GACGGTGGGCGTGCTGACTTACCTCGCCCACCTTGGGTGCTTCCTGCCGT
GCCAGCAAGCCTTGATTGGGCTGGTGGACGGGATCTACACCAGGATTGCG
AGTGCTGAGACGGTGACAGTGCAGCAAAGTACCTTTACCATAGATTGCAG
GTAGGGGCTGGAGGGAGGGAGGGAGAGGGGAGGGAGGGAGGGAGGGTTCA
CACCCAGCAATAGTCGACTGGGTTTCCGCACCTTGTGGGCCCCCACACCC
CACCCTCCTCCTCCCCTAGTCAAATGAACGCTGTCTTTCGGAATGCCACC
CCCTCCTCCCTCATCCTAGGTACGTCACAGCAGAGGCGCAGAAGAGAGGG
AGGGAAAGGGGGCGAGAGGACGAGAGAAAAGACAACGTATTGTTCTCAGC
CCATCTCCCTCCCATCCTCTCTCCCTCTTTCCACACCCAGTGGACGAATT
TGGCAAAGGGTCCGCCGAGACCGACGGCCTGGCTCTGCTGGTCGCCTGCC
TCTCCCGCCTGCATATCCTGGGTGCCCGCACGCTTGTCACGACGCATTTT
CTCGAGCTCTTTCAACGCAAGGGCCTCCTCTCCCCTCACCTCGCCTACGA
GATATCTTACCGCATGGACGTGTTTGTACCGCCCCCCGCTCCCTCCTCTA
ACCCTCCCTCTACGAGCAGCAGTGGAAGCAGCAGCATTCAGACAGTCGTC
CCTTTGTTCAAGCTGACGAAAGGCGTCGCTACTTCTTCTGACGGTTTTTC
GTGCGCAGTTCTAGCAGGGCTTGCCTCACCTTTGGTGAAACGAGCGGAGC
ACGTCGCGCGTTGTCTCGTGGAGGGTACTCTGTCGATTCATCCCCTTCCT
CGTCCTCTTTCGTGGAGGAAGGAGGGAGGGGGGGAGAAGGAGGAGGAAAA
GGAGGCGGAGGAGGCGGGAAAGGGGGAGGAGGAGGAGGGAGGGAAGGGGG
GGCGGGAGGTATTGCGGTATAATAAGGAGGCGCAAGAGGTGCTTAGAGCG
TTTATGGCGGTGGAGGACTGGACGGAGTGTGGGGAGAAAGAGACGCAACA
GTTTGTGGAGTTGCTTCAGAAAGTGTAG
back to top

Coding sequence (CDS) from alignment at chr13:521299..525576-

>NO13G01780.2 ID=NO13G01780.2|Name=NO13G01780.2|organism=Nannochloropsis oceanica|type=CDS|length=2799bp|location=Sequence derived from alignment at chr13:521299..525576- (Nannochloropsis oceanica)
ATGGGGAAGCGTGGGAGGGGGAGAATATCTAAGGCGTACCTGGCCCAGTG
TCACGTCTCGCGTCAGACATTCATCTGCCTCACCTCGTCCTTCCCTATTT
ATTTCCCTCTCCTCCACACAGTGGGCTCCGACTTCCGGGAGACGGTCCAA
GCCCTCAAGCTGCACCTCGGCCCCACTTCCTTCCTCATCGATGCATACCT
TCTCGCCGACGAAGACTTTTGCAAGCTCCTGGGGTGCGCCATCTCGGAGG
ATCGCCCCCAATTTTACATTAAGGTGGCCAAGGCTCGCAACTGGGATTTG
CGACGTGCCATCACTCAGCTGTGCACCTGCTTGGAAGTCCGGGAGCTTGC
TGAAGCCAGCCGAACGAAAGTTGAAGATAGGGAAGACGGGCTGATGCTCC
AAAACCTTATCTCTGGAAGCCGGGGAGGAGGGCGAGAGGGCGGAGCAGGA
GCTGGAGGGTTAGATCCACGAAGGAATTACGACCGATTGAGTTGTGTGAT
CGACTTTCTGGAGGAGCCGCTTTTGGTGAAGGCTTTGGGCGCCTTGCTGA
TTCATTTGCAGGGGCGTGTGTTTTCGCTTGAGATGGCGGGAAGGGTGCCG
GTGGGGAGGCTGAGGAGGTTCGACCTTGCGGGGTTTGTGAGGCTGGACAA
TAACGCCTTGATGAGCTTGCAGATTTTTCATGAGGAGAAACATCCGAATG
TGATCAATGGGAGGGGGAAGGCGAAGGAGGGGTTTTCGTTGTTTAGTTTG
TTGGATCAGACGAGGAGCAGGCCGGGGAGGAAGGTTTTGAAGGAGTGGAT
GTTGCGGCCTTTGCGTTGTGTGGAAAAGATAGAGGAGAGGCAGATGATGG
TTGAATTGTTGCTGCAAGGGGAGGCGATGGAGGTGGTGAACAATGCGGGG
CGGTTGCTCGGGAGGGTGGGGGATGTGGGCAGGGTGCTATTGAGGGTGAA
GAGGGCTGGAGCCACGGTGAACGATTGGCTGACGCTCGCGAATACGGCTC
AACATGTTTTGCTCCTACAAAACTGCCTAATCGTGCTTGGCCACGTGGCA
ATCCGGCAGGAAAGAGTGGTGGAGGGGGGGAAGGAGGAGGGAGGGGCTGC
CCGGGTGGTGCGGGGGGTCTTGGAACGGATTTCGGGGGAGGCAGTGAGGA
GGGTGCAAGAGGTGGTTACTTGTGTCGTTGATCTGGAGATCACGAAGGAG
AGTAAGGTGGTGGCGGTGAGGACCGGCTGTGATGCCGAGTTGGATCGGCT
TAGGGCAGAGTACGACAATTTGGAGGAGTTTTTGAGTGGGGAGGCACGAG
ATGTTTTGGCGGAGCAGGCGTCGCGCTTGCTATCCACGGTGTCGGTGCAG
TTTCTGCCTCAGGTCGGCTTCCTGGTCATCGTGCAAGCCAGTGAGAAAGT
GGCCGTGGAGACCGACCCGCGCTTCCGTTTTGTCTTTGCCGAGGGCGAGT
CGGTGTACTACAAAACCCCGCGGATGGACGTGCTGGACGACAGCATCGGC
GACTTGGCTGCGGCGATCCACGACCGAGAGGCGACGTTGCTCCGAGCGGT
GGGAGAAGAGGTGTTGAAAGAGGAAGTCCCACTCACAGAGGCAGTGCGTG
CCTGCGCAGAGGTCGATGTGCTCCTGTCCTTCGCCCAGGTCGCGGGGGGA
TTGGCCTGGGTGAAGCCCATGATCACGGAGGACAAGGTGGTGGTCGTCAA
AGATGGAAGGCACCCCTTGCAGGAACTGGCCGTGGAAGTCTTCATCCCCA
ATGATGTCTTTCTGGTCGGCAAGGGCGGGGAGTCATCCGACAGGCAGCAG
CAGGAGGGAAGGGGAAAAAGCGAAAAGGAGAAGGCGAATGAAGAGGGGGA
GGAGGGTGAGCAGCAGCAGCAGGAGAGGCGGCAGAAGCGGCGGCCGGAGG
GAGGGCGAGGCCTGGCAGTCGTGACCGGTCCCAACTTCTCGGGGAAGAGT
GTGTATATTAAGACGGTGGGCGTGCTGACTTACCTCGCCCACCTTGGGTG
CTTCCTGCCGTGCCAGCAAGCCTTGATTGGGCTGGTGGACGGGATCTACA
CCAGGATTGCGAGTGCTGAGACGGTGACAGTGCAGCAAAGTACCTTTACC
ATAGATTGCAGTCAAATGAACGCTGTCTTTCGGAATGCCACCCCCTCCTC
CCTCATCCTAGTGGACGAATTTGGCAAAGGGTCCGCCGAGACCGACGGCC
TGGCTCTGCTGGTCGCCTGCCTCTCCCGCCTGCATATCCTGGGTGCCCGC
ACGCTTGTCACGACGCATTTTCTCGAGCTCTTTCAACGCAAGGGCCTCCT
CTCCCCTCACCTCGCCTACGAGATATCTTACCGCATGGACGTGTTTGTAC
CGCCCCCCGCTCCCTCCTCTAACCCTCCCTCTACGAGCAGCAGTGGAAGC
AGCAGCATTCAGACAGTCGTCCCTTTGTTCAAGCTGACGAAAGGCGTCGC
TACTTCTTCTGACGGTTTTTCGTGCGCAGTTCTAGCAGGGCTTGCCTCAC
CTTTGGTGAAACGAGCGGAGCACGTCGCGCGTTGTCTCGTGGAGGGTACT
CTGTCGATTCATCCCCTTCCTCGTCCTCTTTCGTGGAGGAAGGAGGGAGG
GGGGGAGAAGGAGGAGGAAAAGGAGGCGGAGGAGGCGGGAAAGGGGGAGG
AGGAGGAGGGAGGGAAGGGGGGGCGGGAGGTATTGCGGTATAATAAGGAG
GCGCAAGAGGTGCTTAGAGCGTTTATGGCGGTGGAGGACTGGACGGAGTG
TGGGGAGAAAGAGACGCAACAGTTTGTGGAGTTGCTTCAGAAAGTGTAG
back to top
Synonyms
Publications