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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr13 | genome | chr13:477612..480425 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO13G01620.1 vs.
Match: EWM21828.1 (amidophosphoribosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 782.3 bits (2019), Expect = 1.000e-222 Identity = 417/535 (77.94%), Postives = 449/535 (83.93%), Query Frame = 0
Query: 63 MLMLRGNLGIGHVRYPTAGTSSCAEAQPLFTNYPYGICAAHNGNITNTGELRAALAQSLRHINTGSDSELLLNVLAEELQAQHKGKDIVPADMFKAVKEVMARCKGAYGVVMLVNGVGLLGFRDPHGIRPLVFGKRESTTKLGASDFIMASESVAIDTLRFDLVGDVGPGEALLITTEGTLHRSLCAESAQLIPCIFEYVYFARPDSIMDGVQVYEARLNMGERLAKNILRKYPEHDIDVVIPVPDTSRTSGLSCAYTLGRPFREGFIKNRYIARTFIMPGQAVRMKTVRMKLNTIKSEFRGKNVLLVDDSIVRGTTSRELVSMAREAGARNVFVTSAAPAVRYPNVYGIDIPTRAELIANGRDEREVAEELGADWVVYQELDDLKDSIRKINGTIKEFDASCFDGVYVTGGVSDAYLVELQGGRGKKQRHHQQQTEVLRSRSEEGKLNGMGELEEEEGGVTAATITPAVNGGCNAAAAAAVAVAEVAEVEIAKAKAVAASKPGGASSSSG-PLGNGSDGGGGACEVLFNLGRET 597
ML LRGNLGIGHVRYPTAGTSSCAEAQPLFTNYPYGICAAHNGNITNT ELRAAL QSLRHINTGSDSEL+LNV AEELQAQHKG+DI P D+F+AV+++MARC GAYGVVMLVNGVGLLGFRDPHGIRPLV G R STT+ G +DF++ASESVAIDTLRF LVGDVGPGEA+LITTEG LHRS CA S QL+PCIFEYVYFARPDSIMDGVQVYEARLNMGERLA++ILRKYP+HDIDVVIPVPDTSRTSGLSCAYTLGRPFREGFIKNRYIARTFIMPGQAVRMKTVRMKLNTI+SEFRGKNVLLVDDSIVRGTTSRELVSMAREAGAR V+VTSAAPAVRYPNVYGIDIPTR ELIAN RDE +VA ELGADWVVYQ L+DLK SIRKIN +I+EFDASCFDG YVTG ++D YLVELQGGRGKKQ H QQQ EVLR R+E ++ E + A +G +A A AE A A A A PG AS S+ G GG+CEVLFNLGRET
Sbjct: 1 MLTLRGNLGIGHVRYPTAGTSSCAEAQPLFTNYPYGICAAHNGNITNTAELRAALVQSLRHINTGSDSELVLNVFAEELQAQHKGRDICPTDVFEAVRKLMARCHGAYGVVMLVNGVGLLGFRDPHGIRPLVLGTRNSTTQAGLTDFLLASESVAIDTLRFSLVGDVGPGEAILITTEGKLHRSQCARSPQLMPCIFEYVYFARPDSIMDGVQVYEARLNMGERLAESILRKYPQHDIDVVIPVPDTSRTSGLSCAYTLGRPFREGFIKNRYIARTFIMPGQAVRMKTVRMKLNTIRSEFRGKNVLLVDDSIVRGTTSRELVSMAREAGARKVYVTSAAPAVRYPNVYGIDIPTRMELIANERDEAQVAAELGADWVVYQALEDLKTSIRKINPSIQEFDASCFDGRYVTGDITDEYLVELQGGRGKKQGHQQQQAEVLRVRAERKMVSETSENHKTWN---------AHDGNHSANNCVDGAPAE------AGAPAPAGMGPGAASVSTRLSSACGEKKLGGSCEVLFNLGRET 520
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO13G01620.1 ID=NO13G01620.1|Name=NO13G01620.1|organism=Nannochloropsis oceanica|type=mRNA|length=2303bp CCCCACCTCTCCCCCCACGGCCCTCCCCCCCATCCGTCGTCTTCAACGTG CTAGCCACAAGGAATAATGTGCGGCATTTTGGCAGCCTTGTTGGGTGACG CTGACACGCACGTTAACCAACTCATTGTCGATGGCTTGACCGTCTTGCAG CACCGCGGGCAAGACGCCGCCGGCATCGTCACCTCCGAAAAAGGCCACCT CAACCTGCGCAAGGACAATGGCCTCGTCTCCGAGGTCTTCCAGCAACATC ACATGCTCATGCTCCGCGGTAATCTTGGGATCGGCCATGTCCGATACCCC ACTGCAGGCACGTCGTCCTGCGCAGAGGCCCAACCGTTGTTCACCAACTA CCCCTACGGCATCTGCGCGGCCCATAACGGCAACATCACGAATACCGGGG AGTTGCGTGCAGCATTGGCACAGAGTCTGCGGCATATCAATACAGGGTCA GACAGTGAGTTGCTGTTGAATGTGCTCGCGGAGGAATTGCAGGCTCAGCA TAAGGGGAAGGATATTGTGCCTGCTGATATGTTCAAGGCTGTCAAGGAGG TGATGGCGAGGTGCAAGGGGGCGTACGGGGTGGTTATGCTTGTGAACGGC GTGGGCCTGTTAGGCTTCCGGGATCCACATGGGATTCGTCCACTTGTGTT TGGGAAGCGTGAATCGACGACTAAACTCGGCGCCAGTGACTTTATCATGG CTTCGGAAAGTGTCGCTATCGATACCTTGCGGTTTGACCTGGTCGGGGAC GTTGGCCCCGGCGAAGCGCTCTTAATCACTACCGAAGGGACTTTGCATCG GTCTCTCTGCGCAGAGAGCGCACAGCTGATACCGTGCATCTTCGAGTATG TGTACTTCGCGCGCCCTGATTCCATCATGGACGGGGTGCAGGTGTACGAG GCCCGGTTGAACATGGGAGAACGGCTGGCCAAAAACATCCTGCGAAAATA CCCGGAACACGATATAGATGTGGTGATTCCAGTGCCGGACACGAGCCGGA CCTCGGGTTTGTCGTGTGCGTATACGTTGGGGAGGCCGTTCAGGGAGGGG TTCATTAAGAATCGGTACATCGCACGGACGTTTATCATGCCGGGGCAGGC CGTGCGGATGAAGACGGTGCGAATGAAGTTGAATACGATTAAATCGGAGT TTAGGGGTAAGAACGTATTGCTTGTCGATGATTCAATCGTCCGAGGAACG ACGAGTCGGGAGTTGGTGAGCATGGCGAGGGAGGCCGGGGCGAGGAATGT GTTCGTGACCTCTGCAGCACCTGCAGTCCGTTATCCGAATGTGTATGGCA TTGACATCCCAACACGCGCGGAGTTGATTGCGAATGGGAGGGATGAAAGG GAAGTCGCAGAAGAGTTGGGAGCGGATTGGGTCGTATATCAGGAGCTAGA CGACTTGAAGGATAGCATTAGGAAGATCAATGGTACGATAAAGGAGTTCG ACGCCTCATGTTTTGATGGTGTTTACGTCACGGGTGGAGTTAGTGATGCC TACCTCGTGGAGCTCCAGGGCGGGAGGGGTAAGAAGCAACGGCATCATCA GCAACAGACGGAGGTGTTGAGAAGTCGGTCAGAAGAGGGAAAGTTGAACG GGATGGGGGAGTTGGAGGAGGAGGAAGGGGGCGTGACGGCCGCTACGATT ACGCCTGCTGTTAATGGTGGTTGCAATGCTGCTGCCGCCGCTGCTGTTGC GGTTGCAGAAGTCGCTGAAGTGGAGATTGCCAAAGCGAAGGCAGTGGCGG CCTCCAAGCCGGGAGGAGCAAGTTCGAGTTCTGGGCCTTTAGGGAATGGA TCGGACGGAGGGGGGGGGGCGTGCGAGGTGCTCTTCAATTTGGGCCGGGA GACATAGGAGGGAAGGGGGAAGGGTGGCAACATAGCATACGTGTATTCCT ACATATTTTGGAAGCGAGGGAGAGGAGAAGAGCAGGGGTGGGATGGGAAG AGCTTCGGTAGTCTGGTGTTGTCTCGCCCTCAAGTTTTCCTTAACTAACT CATAATTCATGTCATTACCATTATTTTTTAAAAAACACCATACTACAATT ATCATAATTACTCTGATTCTAGCCGCCCGATGCCTTTGGGACAAAGATAA GGGTGCGCTCATGCCTTCTACTTGTCTACAGCTGGCAAGTGAGTAATTCA CTGGGAAGAGGAGATAGGAAAGAGATTTTGTCCTCAGGATCGATGGATGC AAGAAAAAGAAATAGAAGAGAGTATGAAAATGGCCAAAAGATAAAGCAGA CGACGAAAAAGAAAAAGAAGGACGGATAAGCTTTGGTCGAGCAGAATTTG AGA back to topprotein sequence of NO13G01620.1 >NO13G01620.1-protein ID=NO13G01620.1-protein|Name=NO13G01620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=597bp MCGILAALLGDADTHVNQLIVDGLTVLQHRGQDAAGIVTSEKGHLNLRKD NGLVSEVFQQHHMLMLRGNLGIGHVRYPTAGTSSCAEAQPLFTNYPYGIC AAHNGNITNTGELRAALAQSLRHINTGSDSELLLNVLAEELQAQHKGKDI VPADMFKAVKEVMARCKGAYGVVMLVNGVGLLGFRDPHGIRPLVFGKRES TTKLGASDFIMASESVAIDTLRFDLVGDVGPGEALLITTEGTLHRSLCAE SAQLIPCIFEYVYFARPDSIMDGVQVYEARLNMGERLAKNILRKYPEHDI DVVIPVPDTSRTSGLSCAYTLGRPFREGFIKNRYIARTFIMPGQAVRMKT VRMKLNTIKSEFRGKNVLLVDDSIVRGTTSRELVSMAREAGARNVFVTSA APAVRYPNVYGIDIPTRAELIANGRDEREVAEELGADWVVYQELDDLKDS IRKINGTIKEFDASCFDGVYVTGGVSDAYLVELQGGRGKKQRHHQQQTEV LRSRSEEGKLNGMGELEEEEGGVTAATITPAVNGGCNAAAAAAVAVAEVA EVEIAKAKAVAASKPGGASSSSGPLGNGSDGGGGACEVLFNLGRET* back to topmRNA from alignment at chr13:477612..480425- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO13G01620.1 ID=NO13G01620.1|Name=NO13G01620.1|organism=Nannochloropsis oceanica|type=mRNA|length=2814bp|location=Sequence derived from alignment at chr13:477612..480425- (Nannochloropsis oceanica) CCCCACCTCTCCCCCCACGGCCCTCCCCCCCATCCGTCGTCTTCAACGTG
CTAGCCACAAGGAATAATGTGCGGCATTTTGGCAGCCTTGTTGGGTGACG
CTGACACGCACGTTAACCAACTCATTGTCGATGGCTTGACCGTCTTGCAG
CACCGCGGGCAAGGTAAGCAACCAATGGGCAAAAGGATGGGAACGAAGTG
TGATGTGCGGAAGGAATGAAGTGAGCGTGCAGCGCGACCCAATGTACGAG
ATAAATCTGTAAAGAGGCGGACAAGATGCGAGAGTAGGGCAGCTGTGCGT
GTGGCAGCTCTTCATCTCCCTCCACACACACCCGGCAGTTGCCCTCATAA
GGCACTATACTGCCGAATGAGGCACATTGTGAGGGCAATGGGTGTTATTC
TAATTATGCGATGCGGTGTCGGATACCAAATGCTCGAACTTCCTCCGGCA
TGCAATGTTTATAATCTTCTCAACCAAGCACCTCAACCTTCATCAATTCC
TCCCCTCTCTCCCTCCCTAATCGTCGCCGGTACCGTCACCTTCAAACAAG
GCCATGTCCACGATTCCCGCGAAGATCTCGACCCATCTCCGAGTCCTTCT
CTACAATGTCAAAGTCTCATTCACCCCATCTCTTTTCCCCTCCCTCCCTC
TCTCACCTCCTCTATCCCAACCAGACGCCGCCGGCATCGTCACCTCCGAA
AAAGGCCACCTCAACCTGCGCAAGGACAATGGCCTCGTCTCCGAGGTCTT
CCAGCAACATCACATGCTCATGCTCCGCGGTAATCTTGGGATCGGCCATG
TCCGATACCCCACTGCAGGCACGTCGTCCTGCGCAGAGGCCCAACCGTTG
TTCACCAACTACCCCTACGGCATCTGCGCGGCCCATAACGGCAACATCAC
GAATACCGGGGAGTTGCGTGCAGCATTGGCACAGAGTCTGCGGCATATCA
ATACAGGGTCAGACAGTGAGTTGCTGTTGAATGTGCTCGCGGAGGAATTG
CAGGCTCAGCATAAGGGGAAGGATATTGTGCCTGCTGATATGTTCAAGGC
TGTCAAGGAGGTGATGGCGAGGTGCAAGGGGGCGTACGGGGTGGTTATGC
TTGTGAACGGCGTGGGCCTGTTAGGCTTCCGGGATCCACATGGGATTCGT
CCACTTGTGTTTGGGAAGCGTGAATCGACGACTAAACTCGGCGCCAGTGA
CTTTATCATGGCTTCGGAAAGTGTCGCTATCGATACCTTGCGGTTTGACC
TGGTCGGGGACGTTGGCCCCGGCGAAGCGCTCTTAATCACTACCGAAGGG
ACTTTGCATCGGTCTCTCTGCGCAGAGAGCGCACAGCTGATACCGTGCAT
CTTCGAGTATGTGTACTTCGCGCGCCCTGATTCCATCATGGACGGGGTGC
AGGTGTACGAGGCCCGGTTGAACATGGGAGAACGGCTGGCCAAAAACATC
CTGCGAAAATACCCGGAACACGATATAGATGTGGTGATTCCAGTGCCGGA
CACGAGCCGGACCTCGGGTTTGTCGTGTGCGTATACGTTGGGGAGGCCGT
TCAGGGAGGGGTTCATTAAGAATCGGTACATCGCACGGACGTTTATCATG
CCGGGGCAGGCCGTGCGGATGAAGACGGTGCGAATGAAGTTGAATACGAT
TAAATCGGAGTTTAGGGGTAAGAACGTATTGCTTGTCGATGATTCAATCG
TCCGAGGAACGACGAGTCGGGAGTTGGTGAGCATGGCGAGGGAGGCCGGG
GCGAGGAATGTGTTCGTGACCTCTGCAGCACCTGCAGTCCGTTATCCGAA
TGTGTATGGCATTGACATCCCAACACGCGCGGAGTTGATTGCGAATGGGA
GGGATGAAAGGGAAGTCGCAGAAGAGTTGGGAGCGGATTGGGTCGTATAT
CAGGAGCTAGACGACTTGAAGGATAGCATTAGGAAGATCAATGGTACGAT
AAAGGAGTTCGACGCCTCATGTTTTGATGGTGTTTACGTCACGGGTGGAG
TTAGTGATGCCTACCTCGTGGAGCTCCAGGGCGGGAGGGGTAAGAAGCAA
CGGCATCATCAGCAACAGACGGAGGTGTTGAGAAGTCGGTCAGAAGAGGG
AAAGTTGAACGGGATGGGGGAGTTGGAGGAGGAGGAAGGGGGCGTGACGG
CCGCTACGATTACGCCTGCTGTTAATGGTGGTTGCAATGCTGCTGCCGCC
GCTGCTGTTGCGGTTGCAGAAGTCGCTGAAGTGGAGATTGCCAAAGCGAA
GGCAGTGGCGGCCTCCAAGCCGGGAGGAGCAAGTTCGAGTTCTGGGCCTT
TAGGGAATGGATCGGACGGAGGGGGGGGGGCGTGCGAGGTGCTCTTCAAT
TTGGGCCGGGAGACATAGGAGGGAAGGGGGAAGGGTGGCAACATAGCATA
CGTGTATTCCTACATATTTTGGAAGCGAGGGAGAGGAGAAGAGCAGGGGT
GGGATGGGAAGAGCTTCGGTAGTCTGGTGTTGTCTCGCCCTCAAGTTTTC
CTTAACTAACTCATAATTCATGTCATTACCATTATTTTTTAAAAAACACC
ATACTACAATTATCATAATTACTCTGATTCTAGCCGCCCGATGCCTTTGG
GACAAAGATAAGGGTGCGCTCATGCCTTCTACTTGTCTACAGCTGGCAAG
TGAGTAATTCACTGGGAAGAGGAGATAGGAAAGAGATTTTGTCCTCAGGA
TCGATGGATGCAAGAAAAAGAAATAGAAGAGAGTATGAAAATGGCCAAAA
GATAAAGCAGACGACGAAAAAGAAAAAGAAGGACGGATAAGCTTTGGTCG
AGCAGAATTTGAGA back to topCoding sequence (CDS) from alignment at chr13:477612..480425- >NO13G01620.1 ID=NO13G01620.1|Name=NO13G01620.1|organism=Nannochloropsis oceanica|type=CDS|length=1791bp|location=Sequence derived from alignment at chr13:477612..480425- (Nannochloropsis oceanica) ATGTGCGGCATTTTGGCAGCCTTGTTGGGTGACGCTGACACGCACGTTAA CCAACTCATTGTCGATGGCTTGACCGTCTTGCAGCACCGCGGGCAAGACG CCGCCGGCATCGTCACCTCCGAAAAAGGCCACCTCAACCTGCGCAAGGAC AATGGCCTCGTCTCCGAGGTCTTCCAGCAACATCACATGCTCATGCTCCG CGGTAATCTTGGGATCGGCCATGTCCGATACCCCACTGCAGGCACGTCGT CCTGCGCAGAGGCCCAACCGTTGTTCACCAACTACCCCTACGGCATCTGC GCGGCCCATAACGGCAACATCACGAATACCGGGGAGTTGCGTGCAGCATT GGCACAGAGTCTGCGGCATATCAATACAGGGTCAGACAGTGAGTTGCTGT TGAATGTGCTCGCGGAGGAATTGCAGGCTCAGCATAAGGGGAAGGATATT GTGCCTGCTGATATGTTCAAGGCTGTCAAGGAGGTGATGGCGAGGTGCAA GGGGGCGTACGGGGTGGTTATGCTTGTGAACGGCGTGGGCCTGTTAGGCT TCCGGGATCCACATGGGATTCGTCCACTTGTGTTTGGGAAGCGTGAATCG ACGACTAAACTCGGCGCCAGTGACTTTATCATGGCTTCGGAAAGTGTCGC TATCGATACCTTGCGGTTTGACCTGGTCGGGGACGTTGGCCCCGGCGAAG CGCTCTTAATCACTACCGAAGGGACTTTGCATCGGTCTCTCTGCGCAGAG AGCGCACAGCTGATACCGTGCATCTTCGAGTATGTGTACTTCGCGCGCCC TGATTCCATCATGGACGGGGTGCAGGTGTACGAGGCCCGGTTGAACATGG GAGAACGGCTGGCCAAAAACATCCTGCGAAAATACCCGGAACACGATATA GATGTGGTGATTCCAGTGCCGGACACGAGCCGGACCTCGGGTTTGTCGTG TGCGTATACGTTGGGGAGGCCGTTCAGGGAGGGGTTCATTAAGAATCGGT ACATCGCACGGACGTTTATCATGCCGGGGCAGGCCGTGCGGATGAAGACG GTGCGAATGAAGTTGAATACGATTAAATCGGAGTTTAGGGGTAAGAACGT ATTGCTTGTCGATGATTCAATCGTCCGAGGAACGACGAGTCGGGAGTTGG TGAGCATGGCGAGGGAGGCCGGGGCGAGGAATGTGTTCGTGACCTCTGCA GCACCTGCAGTCCGTTATCCGAATGTGTATGGCATTGACATCCCAACACG CGCGGAGTTGATTGCGAATGGGAGGGATGAAAGGGAAGTCGCAGAAGAGT TGGGAGCGGATTGGGTCGTATATCAGGAGCTAGACGACTTGAAGGATAGC ATTAGGAAGATCAATGGTACGATAAAGGAGTTCGACGCCTCATGTTTTGA TGGTGTTTACGTCACGGGTGGAGTTAGTGATGCCTACCTCGTGGAGCTCC AGGGCGGGAGGGGTAAGAAGCAACGGCATCATCAGCAACAGACGGAGGTG TTGAGAAGTCGGTCAGAAGAGGGAAAGTTGAACGGGATGGGGGAGTTGGA GGAGGAGGAAGGGGGCGTGACGGCCGCTACGATTACGCCTGCTGTTAATG GTGGTTGCAATGCTGCTGCCGCCGCTGCTGTTGCGGTTGCAGAAGTCGCT GAAGTGGAGATTGCCAAAGCGAAGGCAGTGGCGGCCTCCAAGCCGGGAGG AGCAAGTTCGAGTTCTGGGCCTTTAGGGAATGGATCGGACGGAGGGGGGG GGGCGTGCGAGGTGCTCTTCAATTTGGGCCGGGAGACATAG back to top
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