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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr13 | genome | chr13:459693..461606 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO13G01550.1 vs.
Match: EWM21819.1 (5 -nucleotidase domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 859.4 bits (2219), Expect = 7.200e-246 Identity = 430/558 (77.06%), Postives = 480/558 (86.02%), Query Frame = 0
Query: 90 LSSITHPHPRINRLLREYLAKME-EGPPTSNSLQPPG-QEQQKIPRKDRIFVNNAINLGKVDVLGWDYDYTLVSYTDKMEGLIYSMAKDYLIEHSGYPTEMKTRRTYDPHFAIRGLAVDMDRGWLLKLSYINQIALRTVFNGRQRLTKQEVLAEYGDSSHISPQYRNEHLKPLLDLFSMSLACLLADVLDYLNKLDIHHDRRAVVEDVMKAINHVHLSGNMHKEVVKDPPTYMMPSPHLRETLTRFRDVGKKLFLCSNSNYEYVSGGLRFLIGDDWQEFFDVVIVSADKPGFYTSDRPFRQVAQSTGKIRWTEVTTLEKGKVYSHGSLDGLTKLTGWMGPRVLYIGDQIWADLVGARRNQGWRTGAVIRELDHELLVQQSTKYRAHAHKVITVTELLRLVQEDMEKIRSEATAAAAKAKVAEGGKVGGAAPYLLQEADVIVSDGLEKYLRHLQTEMSKMFNGNFGSVFRAEGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHDPYIPAITRPPPSAVEEEGGGGRE-------GVEESKGS-EEGR 638
LS ITHPHPR+NRLLREYLAKME E NSLQ PG Q +Q +PRKDRIFVNN+INLGKVDVLG+DYDYTLVSYT KMEGLIYSMAKDYLIEHSGYP+EMKTRR YDP FA+RGLAVD+DRGW+LKLSYI+QIALRTVF GR+RL+K+EV+A YGD +H+SPQYRN H+KPLLDLF++S ACL+ADVLDYLN+L+IHHDR+AVVEDV++AI+HVH SG MHK VV+DPPTYM+PSPHLRETL RFRDVGKKLFLCSNSN+EYVSGGL+FL+G DWQEFFDVVIVSA KPGFYTS+RPFRQV + TGKIRWTEVTTLEKGKVYSHGSL+GLTKLTGW GPRVLYIGDQIWADLVG RRNQGWRTGAVIREL++EL+VQQS KYR +AH+ +TVTELLRLVQE+MEKIR+ EADV VSDGLE+YLR+LQTEMSKMFN NFGSVFR+ GEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHDPYIPAI RPPP+ +E+ GG+E V E K S +EGR
Sbjct: 42 LSDITHPHPRVNRLLREYLAKMEQESADLPNSLQQPGYQVKQSLPRKDRIFVNNSINLGKVDVLGFDYDYTLVSYTHKMEGLIYSMAKDYLIEHSGYPSEMKTRRMYDPRFAVRGLAVDVDRGWVLKLSYIHQIALRTVFCGRRRLSKEEVVAAYGDGAHVSPQYRNNHMKPLLDLFALSEACLVADVLDYLNELNIHHDRQAVVEDVLQAISHVHTSGEMHKTVVRDPPTYMLPSPHLRETLMRFRDVGKKLFLCSNSNFEYVSGGLQFLLGADWQEFFDVVIVSAGKPGFYTSNRPFRQVDKRTGKIRWTEVTTLEKGKVYSHGSLEGLTKLTGWQGPRVLYIGDQIWADLVGGRRNQGWRTGAVIRELEYELVVQQSKKYRQYAHQAVTVTELLRLVQEEMEKIRT--------------------------EADVRVSDGLEEYLRYLQTEMSKMFNANFGSVFRSGGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMPHDPYIPAIGRPPPATGDEKASGGQEWASVGINAVPEDKTSRKEGR 573
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO13G01550.1 ID=NO13G01550.1|Name=NO13G01550.1|organism=Nannochloropsis oceanica|type=mRNA|length=1914bp
ATGGGACCAATGCTACGGCGTTTGGTAAGAAGGGCAGGCACGGCCTGGGG
TGCCGGAAATGGCAGCAGCAGCATCCGCAGCCCATTGTGCGGCGGCTATT
TGTCGCGACCCCTTCCGACTACCATGATCAGCAGCGCCCCCAGCACCAGC
ACCAACACAGGCATCAAAATTGGCAGCAGTATCCCCAGTCGTGGGGGATT
TATTTGGCTGTCGCGGTCTTTGTCGTCCACCGCACCCACAAAACACAAGA
AGCATACCCCTCAGCCCTTGAGCAGCATCACGCACCCACACCCGCGAATA
AATCGGCTGCTGCGCGAATATCTGGCCAAGATGGAAGAGGGGCCACCGAC
TTCTAATTCTCTCCAGCCGCCTGGCCAGGAGCAGCAAAAAATACCCCGGA
AGGACCGTATATTTGTCAACAACGCAATCAACTTGGGCAAGGTGGACGTC
TTAGGCTGGGATTACGATTACACGCTCGTGAGTTATACCGACAAGATGGA
AGGCCTTATATACAGCATGGCCAAGGATTATCTGATCGAGCACTCGGGCT
ACCCTACGGAGATGAAGACTCGTCGCACGTACGACCCGCACTTTGCTATT
CGCGGCCTTGCCGTGGACATGGATCGAGGGTGGCTGCTCAAGCTCAGTTA
TATCAACCAAATCGCGCTGCGGACTGTTTTCAATGGCCGACAGCGCTTGA
CAAAGCAAGAGGTGTTGGCTGAGTACGGGGACAGCTCTCACATCTCGCCA
CAGTACCGAAACGAGCACTTGAAGCCTCTTCTTGACTTGTTCTCCATGTC
GCTGGCCTGCCTGCTCGCCGATGTCCTCGACTATTTGAACAAATTAGACA
TCCACCACGACCGCCGCGCCGTCGTAGAAGACGTAATGAAAGCTATTAAC
CACGTGCACTTGAGCGGAAACATGCACAAGGAAGTGGTCAAGGACCCGCC
CACCTACATGATGCCCTCGCCCCACTTACGCGAGACCCTGACACGCTTCC
GCGACGTGGGCAAAAAGCTATTTCTGTGCTCCAACTCCAATTACGAATAT
GTGTCGGGGGGGCTTCGATTCCTGATTGGAGATGATTGGCAGGAGTTTTT
TGACGTGGTAATCGTGAGCGCGGACAAGCCGGGTTTCTATACCTCTGATC
GACCATTCCGTCAGGTGGCACAGAGCACGGGCAAGATTCGGTGGACGGAA
GTGACCACGCTGGAGAAAGGCAAGGTCTACTCACACGGCTCTTTGGATGG
CTTGACAAAGCTGACGGGGTGGATGGGCCCGCGAGTGCTGTATATTGGGG
ATCAGATTTGGGCGGACTTGGTGGGGGCTCGGCGGAACCAGGGGTGGCGC
ACAGGAGCGGTGATTCGGGAGTTGGACCATGAATTGCTTGTGCAGCAATC
GACAAAGTACCGGGCGCATGCCCATAAGGTGATAACTGTGACGGAGCTCT
TGCGCTTGGTGCAAGAAGATATGGAGAAGATTCGGAGTGAGGCAACAGCA
GCGGCGGCGAAAGCGAAAGTTGCAGAGGGTGGGAAGGTGGGAGGGGCGGC
GCCGTATTTGTTGCAAGAAGCGGATGTTATTGTCTCGGATGGGTTGGAAA
AGTATTTGAGGCATCTCCAGACAGAAATGTCCAAGATGTTCAATGGTAAT
TTCGGCTCTGTCTTTCGGGCAGAAGGAGAACCCACATTGTTTGCGTTTTC
GCTACGGCGGTACGCGGATCTGTATTTGAGTAAGCTCGAGAATTTTCGAT
TTTACTCGCCCATGCATCGTTTCTACCCTCAACGAGGGATTTCAATGCCG
CATGATCCGTACATTCCGGCAATCACCCGCCCGCCTCCCTCTGCGGTGGA
GGAGGAAGGGGGTGGAGGGCGAGAAGGAGTGGAAGAGTCGAAAGGTTCAG
AGGAGGGGAGGTAA back to topprotein sequence of NO13G01550.1 >NO13G01550.1-protein ID=NO13G01550.1-protein|Name=NO13G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=638bp
MGPMLRRLVRRAGTAWGAGNGSSSIRSPLCGGYLSRPLPTTMISSAPSTS
TNTGIKIGSSIPSRGGFIWLSRSLSSTAPTKHKKHTPQPLSSITHPHPRI
NRLLREYLAKMEEGPPTSNSLQPPGQEQQKIPRKDRIFVNNAINLGKVDV
LGWDYDYTLVSYTDKMEGLIYSMAKDYLIEHSGYPTEMKTRRTYDPHFAI
RGLAVDMDRGWLLKLSYINQIALRTVFNGRQRLTKQEVLAEYGDSSHISP
QYRNEHLKPLLDLFSMSLACLLADVLDYLNKLDIHHDRRAVVEDVMKAIN
HVHLSGNMHKEVVKDPPTYMMPSPHLRETLTRFRDVGKKLFLCSNSNYEY
VSGGLRFLIGDDWQEFFDVVIVSADKPGFYTSDRPFRQVAQSTGKIRWTE
VTTLEKGKVYSHGSLDGLTKLTGWMGPRVLYIGDQIWADLVGARRNQGWR
TGAVIRELDHELLVQQSTKYRAHAHKVITVTELLRLVQEDMEKIRSEATA
AAAKAKVAEGGKVGGAAPYLLQEADVIVSDGLEKYLRHLQTEMSKMFNGN
FGSVFRAEGEPTLFAFSLRRYADLYLSKLENFRFYSPMHRFYPQRGISMP
HDPYIPAITRPPPSAVEEEGGGGREGVEESKGSEEGR* back to topmRNA from alignment at chr13:459693..461606- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO13G01550.1 ID=NO13G01550.1|Name=NO13G01550.1|organism=Nannochloropsis oceanica|type=mRNA|length=1914bp|location=Sequence derived from alignment at chr13:459693..461606- (Nannochloropsis oceanica)
ATGGGACCAATGCTACGGCGTTTGGTAAGAAGGGCAGGCACGGCCTGGGG
TGCCGGAAATGGCAGCAGCAGCATCCGCAGCCCATTGTGCGGCGGCTATT
TGTCGCGACCCCTTCCGACTACCATGATCAGCAGCGCCCCCAGCACCAGC
ACCAACACAGGCATCAAAATTGGCAGCAGTATCCCCAGTCGTGGGGGATT
TATTTGGCTGTCGCGGTCTTTGTCGTCCACCGCACCCACAAAACACAAGA
AGCATACCCCTCAGCCCTTGAGCAGCATCACGCACCCACACCCGCGAATA
AATCGGCTGCTGCGCGAATATCTGGCCAAGATGGAAGAGGGGCCACCGAC
TTCTAATTCTCTCCAGCCGCCTGGCCAGGAGCAGCAAAAAATACCCCGGA
AGGACCGTATATTTGTCAACAACGCAATCAACTTGGGCAAGGTGGACGTC
TTAGGCTGGGATTACGATTACACGCTCGTGAGTTATACCGACAAGATGGA
AGGCCTTATATACAGCATGGCCAAGGATTATCTGATCGAGCACTCGGGCT
ACCCTACGGAGATGAAGACTCGTCGCACGTACGACCCGCACTTTGCTATT
CGCGGCCTTGCCGTGGACATGGATCGAGGGTGGCTGCTCAAGCTCAGTTA
TATCAACCAAATCGCGCTGCGGACTGTTTTCAATGGCCGACAGCGCTTGA
CAAAGCAAGAGGTGTTGGCTGAGTACGGGGACAGCTCTCACATCTCGCCA
CAGTACCGAAACGAGCACTTGAAGCCTCTTCTTGACTTGTTCTCCATGTC
GCTGGCCTGCCTGCTCGCCGATGTCCTCGACTATTTGAACAAATTAGACA
TCCACCACGACCGCCGCGCCGTCGTAGAAGACGTAATGAAAGCTATTAAC
CACGTGCACTTGAGCGGAAACATGCACAAGGAAGTGGTCAAGGACCCGCC
CACCTACATGATGCCCTCGCCCCACTTACGCGAGACCCTGACACGCTTCC
GCGACGTGGGCAAAAAGCTATTTCTGTGCTCCAACTCCAATTACGAATAT
GTGTCGGGGGGGCTTCGATTCCTGATTGGAGATGATTGGCAGGAGTTTTT
TGACGTGGTAATCGTGAGCGCGGACAAGCCGGGTTTCTATACCTCTGATC
GACCATTCCGTCAGGTGGCACAGAGCACGGGCAAGATTCGGTGGACGGAA
GTGACCACGCTGGAGAAAGGCAAGGTCTACTCACACGGCTCTTTGGATGG
CTTGACAAAGCTGACGGGGTGGATGGGCCCGCGAGTGCTGTATATTGGGG
ATCAGATTTGGGCGGACTTGGTGGGGGCTCGGCGGAACCAGGGGTGGCGC
ACAGGAGCGGTGATTCGGGAGTTGGACCATGAATTGCTTGTGCAGCAATC
GACAAAGTACCGGGCGCATGCCCATAAGGTGATAACTGTGACGGAGCTCT
TGCGCTTGGTGCAAGAAGATATGGAGAAGATTCGGAGTGAGGCAACAGCA
GCGGCGGCGAAAGCGAAAGTTGCAGAGGGTGGGAAGGTGGGAGGGGCGGC
GCCGTATTTGTTGCAAGAAGCGGATGTTATTGTCTCGGATGGGTTGGAAA
AGTATTTGAGGCATCTCCAGACAGAAATGTCCAAGATGTTCAATGGTAAT
TTCGGCTCTGTCTTTCGGGCAGAAGGAGAACCCACATTGTTTGCGTTTTC
GCTACGGCGGTACGCGGATCTGTATTTGAGTAAGCTCGAGAATTTTCGAT
TTTACTCGCCCATGCATCGTTTCTACCCTCAACGAGGGATTTCAATGCCG
CATGATCCGTACATTCCGGCAATCACCCGCCCGCCTCCCTCTGCGGTGGA
GGAGGAAGGGGGTGGAGGGCGAGAAGGAGTGGAAGAGTCGAAAGGTTCAG
AGGAGGGGAGGTAA back to topCoding sequence (CDS) from alignment at chr13:459693..461606- >NO13G01550.1 ID=NO13G01550.1|Name=NO13G01550.1|organism=Nannochloropsis oceanica|type=CDS|length=1914bp|location=Sequence derived from alignment at chr13:459693..461606- (Nannochloropsis oceanica)
ATGGGACCAATGCTACGGCGTTTGGTAAGAAGGGCAGGCACGGCCTGGGG
TGCCGGAAATGGCAGCAGCAGCATCCGCAGCCCATTGTGCGGCGGCTATT
TGTCGCGACCCCTTCCGACTACCATGATCAGCAGCGCCCCCAGCACCAGC
ACCAACACAGGCATCAAAATTGGCAGCAGTATCCCCAGTCGTGGGGGATT
TATTTGGCTGTCGCGGTCTTTGTCGTCCACCGCACCCACAAAACACAAGA
AGCATACCCCTCAGCCCTTGAGCAGCATCACGCACCCACACCCGCGAATA
AATCGGCTGCTGCGCGAATATCTGGCCAAGATGGAAGAGGGGCCACCGAC
TTCTAATTCTCTCCAGCCGCCTGGCCAGGAGCAGCAAAAAATACCCCGGA
AGGACCGTATATTTGTCAACAACGCAATCAACTTGGGCAAGGTGGACGTC
TTAGGCTGGGATTACGATTACACGCTCGTGAGTTATACCGACAAGATGGA
AGGCCTTATATACAGCATGGCCAAGGATTATCTGATCGAGCACTCGGGCT
ACCCTACGGAGATGAAGACTCGTCGCACGTACGACCCGCACTTTGCTATT
CGCGGCCTTGCCGTGGACATGGATCGAGGGTGGCTGCTCAAGCTCAGTTA
TATCAACCAAATCGCGCTGCGGACTGTTTTCAATGGCCGACAGCGCTTGA
CAAAGCAAGAGGTGTTGGCTGAGTACGGGGACAGCTCTCACATCTCGCCA
CAGTACCGAAACGAGCACTTGAAGCCTCTTCTTGACTTGTTCTCCATGTC
GCTGGCCTGCCTGCTCGCCGATGTCCTCGACTATTTGAACAAATTAGACA
TCCACCACGACCGCCGCGCCGTCGTAGAAGACGTAATGAAAGCTATTAAC
CACGTGCACTTGAGCGGAAACATGCACAAGGAAGTGGTCAAGGACCCGCC
CACCTACATGATGCCCTCGCCCCACTTACGCGAGACCCTGACACGCTTCC
GCGACGTGGGCAAAAAGCTATTTCTGTGCTCCAACTCCAATTACGAATAT
GTGTCGGGGGGGCTTCGATTCCTGATTGGAGATGATTGGCAGGAGTTTTT
TGACGTGGTAATCGTGAGCGCGGACAAGCCGGGTTTCTATACCTCTGATC
GACCATTCCGTCAGGTGGCACAGAGCACGGGCAAGATTCGGTGGACGGAA
GTGACCACGCTGGAGAAAGGCAAGGTCTACTCACACGGCTCTTTGGATGG
CTTGACAAAGCTGACGGGGTGGATGGGCCCGCGAGTGCTGTATATTGGGG
ATCAGATTTGGGCGGACTTGGTGGGGGCTCGGCGGAACCAGGGGTGGCGC
ACAGGAGCGGTGATTCGGGAGTTGGACCATGAATTGCTTGTGCAGCAATC
GACAAAGTACCGGGCGCATGCCCATAAGGTGATAACTGTGACGGAGCTCT
TGCGCTTGGTGCAAGAAGATATGGAGAAGATTCGGAGTGAGGCAACAGCA
GCGGCGGCGAAAGCGAAAGTTGCAGAGGGTGGGAAGGTGGGAGGGGCGGC
GCCGTATTTGTTGCAAGAAGCGGATGTTATTGTCTCGGATGGGTTGGAAA
AGTATTTGAGGCATCTCCAGACAGAAATGTCCAAGATGTTCAATGGTAAT
TTCGGCTCTGTCTTTCGGGCAGAAGGAGAACCCACATTGTTTGCGTTTTC
GCTACGGCGGTACGCGGATCTGTATTTGAGTAAGCTCGAGAATTTTCGAT
TTTACTCGCCCATGCATCGTTTCTACCCTCAACGAGGGATTTCAATGCCG
CATGATCCGTACATTCCGGCAATCACCCGCCCGCCTCCCTCTGCGGTGGA
GGAGGAAGGGGGTGGAGGGCGAGAAGGAGTGGAAGAGTCGAAAGGTTCAG
AGGAGGGGAGGTAA back to top
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