NO13G01370.1, NO13G01370.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO13G01370.1
Unique NameNO13G01370.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1809
Alignment locationchr13:419283..421091 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:419283..421091 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO13G01370.1 vs.
Match: EWM21808.1 (leucyl aminopeptidase [Nannochloropsis gaditana])

HSP 1 Score: 891.3 bits (2302), Expect = 1.600e-255
Identity = 466/601 (77.54%), Postives = 517/601 (86.02%), Query Frame = 0
Query:    1 MLSRSPRWCVTTMMITLLLRSTSAGMARRGA-GAAFMAPSGVIFPPLATTTTTSSRTPFSSPSAALPARRGGAAMWPFSSATRLFSTTNADTGISWRTQAPSVAKLESLAGMGDATFKVDLLVLPAFQPEEDGEDVQLAVDTQPILAAWDSALGGAIADLVQTKDFKGKAGSAARVRLGNNSAVKSLTLVGMGKKSQFKSARAMGPAAATDIKAEKPKTVAVVLPGGDCLGAVAEDMLSGLYLDNRFKTGEGVEKAAMVEKLSFYGVEAGKDAEGALKKAQAFSEGVRLTKDLVGAPANYVTPQALAETARSIAGEYEGWSVKVMGRKECADLNMGAYLAVAQGSMDPPEFIHLSYKPKGEAKKKLVLVGKGLTFDSGGYNLKAGAGSMIELMKFDMGGAGAVLGAAKILAGLAPEGVEVHVIVAACENMISAQAYRPGDILKASNGKTIEVLNTDAEGRLTLADALVYAEKLDPDAIVDAATLTGACIIALGGEYGGMWTGDDNLAAALEAAATTKGENFWRMPLAEEYKPNIKSEIADLKNVGGREGGSITAALFLQEFVTKKTPWAHLDIAGPVWNPKKGGATGFGARTLAQWVLSQA 601
            ML RS   C  T+  +   RS S   ARRGA    F+APSG IFPP+A     S  +  S+PS++   RRGG  +WPF    RLFS+T +++ I  R+Q P+VAKL+S +G+GDATFK DLLVLPAFQ EEDG+DV+LAV  Q ILAAWD ALGGA+ DL++TKDFKGKAGS ARVRLG  + VKSLTLVGMGKKS FK++RA+GPAAATDIKAEKPKT+AVVLP  D LG V+E++LSGLYLDNRFKTGEGVEKAA VE L+F+G  AG+D   AL++AQAF+EGVRLTKDLVGAPANYVTP+ALA+TAR+IA E+ GW VKVMG++EC  L MGAYLAVAQGS DPPEFIHLSYKP G  KKKLVLVGKGLTFDSGGYNLKAGAGSMIELMKFDMGGAGAVLGAAK+LAGLA EGVEVHVIVAACENMISAQAYRPGDIL+ASNGKTIEVLNTDAEGRLTLADALVYAEKL PDAIVD ATLTGACIIALGG+YGGMWTGDD LA++LEAAA+ KGE FWRMPLAEEYKPNIKSEIADLKNVGGREGGSITAALFLQEFV+K TPWAHLDIAGPVWNPKKGGATGFGARTLA+WVLSQA
Sbjct:    1 MLFRSSICCFMTIATSAFQRSVSGAAARRGAIVGGFLAPSGAIFPPVAGKNIQSRTSRSSTPSSSFVGRRGGGGLWPFHGTIRLFSSTLSNS-IPLRSQPPAVAKLQSFSGVGDATFKGDLLVLPAFQSEEDGDDVRLAVSGQAILAAWDEALGGAVTDLIETKDFKGKAGSVARVRLGRGAEVKSLTLVGMGKKSTFKNSRALGPAAATDIKAEKPKTIAVVLPSEDDLGLVSEEVLSGLYLDNRFKTGEGVEKAAQVESLTFFG--AGEDQAPALRQAQAFAEGVRLTKDLVGAPANYVTPKALADTARAIAEEHAGWEVKVMGQRECEALKMGAYLAVAQGSKDPPEFIHLSYKPPGVPKKKLVLVGKGLTFDSGGYNLKAGAGSMIELMKFDMGGAGAVLGAAKVLAGLASEGVEVHVIVAACENMISAQAYRPGDILQASNGKTIEVLNTDAEGRLTLADALVYAEKLKPDAIVDVATLTGACIIALGGDYGGMWTGDDTLASSLEAAASAKGERFWRMPLAEEYKPNIKSEIADLKNVGGREGGSITAALFLQEFVSKTTPWAHLDIAGPVWNPKKGGATGFGARTLAEWVLSQA 598          
The following BLAST results are available for this feature:
BLAST of NO13G01370.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM21808.11.600e-25577.54leucyl aminopeptidase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01370NO13G01370Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO13G01370.1NO13G01370.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO13G01370.1.cds1NO13G01370.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO13G01370.1 ID=NO13G01370.1|Name=NO13G01370.1|organism=Nannochloropsis oceanica|type=mRNA|length=1809bp
ATGCTCTCCCGGTCGCCCCGGTGGTGCGTTACGACAATGATGATAACGCT
TTTGCTGCGCTCCACCTCAGCTGGGATGGCCCGCCGTGGTGCTGGAGCCG
CTTTCATGGCCCCCTCAGGCGTTATTTTCCCTCCCTTGGCGACCACAACC
ACGACTAGTAGCCGCACTCCATTCTCGTCTCCCTCTGCTGCCCTGCCGGC
GCGTCGTGGAGGTGCGGCGATGTGGCCTTTCTCGAGCGCCACCCGTCTGT
TTTCCACCACCAATGCCGACACAGGCATCTCCTGGCGTACCCAAGCCCCG
AGCGTCGCCAAGCTCGAGTCCCTGGCCGGCATGGGCGACGCTACCTTCAA
AGTCGACTTACTTGTGCTCCCCGCCTTTCAGCCCGAAGAGGATGGGGAGG
ATGTCCAGTTGGCTGTGGATACCCAACCCATTCTGGCTGCTTGGGATAGT
GCCTTGGGTGGCGCCATCGCCGACCTCGTCCAAACTAAGGACTTCAAGGG
CAAGGCTGGCTCGGCCGCACGTGTCCGCCTTGGCAATAATTCCGCGGTTA
AGAGCTTGACATTAGTGGGAATGGGTAAGAAGAGTCAATTCAAAAGTGCA
CGTGCTATGGGACCGGCGGCCGCTACGGACATAAAGGCGGAGAAGCCGAA
GACGGTTGCGGTGGTGCTGCCCGGAGGAGATTGTTTGGGTGCTGTAGCGG
AGGACATGCTCTCAGGTCTTTATTTGGATAATCGGTTCAAGACGGGGGAA
GGGGTGGAAAAAGCGGCCATGGTTGAGAAGCTGTCGTTTTACGGGGTTGA
GGCGGGGAAGGATGCGGAGGGGGCCTTGAAGAAGGCACAGGCTTTTTCGG
AAGGCGTGAGGTTGACCAAGGACTTGGTTGGGGCACCTGCGAATTACGTG
ACTCCTCAGGCATTGGCGGAGACGGCGCGAAGCATCGCAGGGGAGTACGA
AGGGTGGAGTGTCAAGGTGATGGGACGGAAGGAGTGTGCTGATTTGAACA
TGGGAGCGTATCTTGCAGTGGCTCAAGGCTCGATGGACCCCCCTGAATTT
ATCCATTTGTCGTACAAACCTAAAGGAGAGGCGAAGAAGAAGTTGGTATT
GGTCGGGAAGGGATTGACCTTCGACAGTGGAGGCTACAACCTGAAGGCAG
GTGCTGGGTCCATGATTGAGTTGATGAAATTTGATATGGGAGGGGCGGGG
GCTGTGCTTGGAGCAGCGAAGATCCTTGCAGGTTTGGCTCCGGAGGGAGT
GGAAGTGCATGTGATTGTGGCGGCGTGTGAGAATATGATTAGCGCGCAGG
CGTACCGGCCTGGCGATATATTGAAAGCATCGAATGGAAAGACAATTGAG
GTATTGAACACGGATGCCGAGGGAAGGTTGACATTGGCAGACGCCTTGGT
ATACGCCGAGAAACTCGACCCGGACGCGATTGTTGATGCGGCAACTCTCA
CTGGTGCGTGTATCATTGCGCTAGGAGGGGAATACGGTGGGATGTGGACT
GGGGATGATAACTTAGCTGCTGCCCTCGAGGCAGCAGCGACGACGAAGGG
GGAGAATTTCTGGAGGATGCCGCTGGCAGAAGAGTATAAGCCGAACATCA
AGAGTGAGATTGCGGACTTGAAGAATGTGGGCGGAAGGGAGGGGGGCTCC
ATCACGGCGGCGTTGTTTTTGCAGGAGTTTGTGACGAAGAAAACGCCGTG
GGCCCATTTGGATATTGCGGGGCCTGTGTGGAACCCGAAGAAGGGGGGGG
CGACGGGGTTTGGTGCTAGAACGTTGGCGCAGTGGGTGTTGTCGCAGGCA
TCATTGTAG
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protein sequence of NO13G01370.1

>NO13G01370.1-protein ID=NO13G01370.1-protein|Name=NO13G01370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=603bp
MLSRSPRWCVTTMMITLLLRSTSAGMARRGAGAAFMAPSGVIFPPLATTT
TTSSRTPFSSPSAALPARRGGAAMWPFSSATRLFSTTNADTGISWRTQAP
SVAKLESLAGMGDATFKVDLLVLPAFQPEEDGEDVQLAVDTQPILAAWDS
ALGGAIADLVQTKDFKGKAGSAARVRLGNNSAVKSLTLVGMGKKSQFKSA
RAMGPAAATDIKAEKPKTVAVVLPGGDCLGAVAEDMLSGLYLDNRFKTGE
GVEKAAMVEKLSFYGVEAGKDAEGALKKAQAFSEGVRLTKDLVGAPANYV
TPQALAETARSIAGEYEGWSVKVMGRKECADLNMGAYLAVAQGSMDPPEF
IHLSYKPKGEAKKKLVLVGKGLTFDSGGYNLKAGAGSMIELMKFDMGGAG
AVLGAAKILAGLAPEGVEVHVIVAACENMISAQAYRPGDILKASNGKTIE
VLNTDAEGRLTLADALVYAEKLDPDAIVDAATLTGACIIALGGEYGGMWT
GDDNLAAALEAAATTKGENFWRMPLAEEYKPNIKSEIADLKNVGGREGGS
ITAALFLQEFVTKKTPWAHLDIAGPVWNPKKGGATGFGARTLAQWVLSQA
SL*
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mRNA from alignment at chr13:419283..421091-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO13G01370.1 ID=NO13G01370.1|Name=NO13G01370.1|organism=Nannochloropsis oceanica|type=mRNA|length=1809bp|location=Sequence derived from alignment at chr13:419283..421091- (Nannochloropsis oceanica)
ATGCTCTCCCGGTCGCCCCGGTGGTGCGTTACGACAATGATGATAACGCT TTTGCTGCGCTCCACCTCAGCTGGGATGGCCCGCCGTGGTGCTGGAGCCG CTTTCATGGCCCCCTCAGGCGTTATTTTCCCTCCCTTGGCGACCACAACC ACGACTAGTAGCCGCACTCCATTCTCGTCTCCCTCTGCTGCCCTGCCGGC GCGTCGTGGAGGTGCGGCGATGTGGCCTTTCTCGAGCGCCACCCGTCTGT TTTCCACCACCAATGCCGACACAGGCATCTCCTGGCGTACCCAAGCCCCG AGCGTCGCCAAGCTCGAGTCCCTGGCCGGCATGGGCGACGCTACCTTCAA AGTCGACTTACTTGTGCTCCCCGCCTTTCAGCCCGAAGAGGATGGGGAGG ATGTCCAGTTGGCTGTGGATACCCAACCCATTCTGGCTGCTTGGGATAGT GCCTTGGGTGGCGCCATCGCCGACCTCGTCCAAACTAAGGACTTCAAGGG CAAGGCTGGCTCGGCCGCACGTGTCCGCCTTGGCAATAATTCCGCGGTTA AGAGCTTGACATTAGTGGGAATGGGTAAGAAGAGTCAATTCAAAAGTGCA CGTGCTATGGGACCGGCGGCCGCTACGGACATAAAGGCGGAGAAGCCGAA GACGGTTGCGGTGGTGCTGCCCGGAGGAGATTGTTTGGGTGCTGTAGCGG AGGACATGCTCTCAGGTCTTTATTTGGATAATCGGTTCAAGACGGGGGAA GGGGTGGAAAAAGCGGCCATGGTTGAGAAGCTGTCGTTTTACGGGGTTGA GGCGGGGAAGGATGCGGAGGGGGCCTTGAAGAAGGCACAGGCTTTTTCGG AAGGCGTGAGGTTGACCAAGGACTTGGTTGGGGCACCTGCGAATTACGTG ACTCCTCAGGCATTGGCGGAGACGGCGCGAAGCATCGCAGGGGAGTACGA AGGGTGGAGTGTCAAGGTGATGGGACGGAAGGAGTGTGCTGATTTGAACA TGGGAGCGTATCTTGCAGTGGCTCAAGGCTCGATGGACCCCCCTGAATTT ATCCATTTGTCGTACAAACCTAAAGGAGAGGCGAAGAAGAAGTTGGTATT GGTCGGGAAGGGATTGACCTTCGACAGTGGAGGCTACAACCTGAAGGCAG GTGCTGGGTCCATGATTGAGTTGATGAAATTTGATATGGGAGGGGCGGGG GCTGTGCTTGGAGCAGCGAAGATCCTTGCAGGTTTGGCTCCGGAGGGAGT GGAAGTGCATGTGATTGTGGCGGCGTGTGAGAATATGATTAGCGCGCAGG CGTACCGGCCTGGCGATATATTGAAAGCATCGAATGGAAAGACAATTGAG GTATTGAACACGGATGCCGAGGGAAGGTTGACATTGGCAGACGCCTTGGT ATACGCCGAGAAACTCGACCCGGACGCGATTGTTGATGCGGCAACTCTCA CTGGTGCGTGTATCATTGCGCTAGGAGGGGAATACGGTGGGATGTGGACT GGGGATGATAACTTAGCTGCTGCCCTCGAGGCAGCAGCGACGACGAAGGG GGAGAATTTCTGGAGGATGCCGCTGGCAGAAGAGTATAAGCCGAACATCA AGAGTGAGATTGCGGACTTGAAGAATGTGGGCGGAAGGGAGGGGGGCTCC ATCACGGCGGCGTTGTTTTTGCAGGAGTTTGTGACGAAGAAAACGCCGTG GGCCCATTTGGATATTGCGGGGCCTGTGTGGAACCCGAAGAAGGGGGGGG CGACGGGGTTTGGTGCTAGAACGTTGGCGCAGTGGGTGTTGTCGCAGGCA TCATTGTAG
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Coding sequence (CDS) from alignment at chr13:419283..421091-

>NO13G01370.1 ID=NO13G01370.1|Name=NO13G01370.1|organism=Nannochloropsis oceanica|type=CDS|length=1809bp|location=Sequence derived from alignment at chr13:419283..421091- (Nannochloropsis oceanica)
ATGCTCTCCCGGTCGCCCCGGTGGTGCGTTACGACAATGATGATAACGCT
TTTGCTGCGCTCCACCTCAGCTGGGATGGCCCGCCGTGGTGCTGGAGCCG
CTTTCATGGCCCCCTCAGGCGTTATTTTCCCTCCCTTGGCGACCACAACC
ACGACTAGTAGCCGCACTCCATTCTCGTCTCCCTCTGCTGCCCTGCCGGC
GCGTCGTGGAGGTGCGGCGATGTGGCCTTTCTCGAGCGCCACCCGTCTGT
TTTCCACCACCAATGCCGACACAGGCATCTCCTGGCGTACCCAAGCCCCG
AGCGTCGCCAAGCTCGAGTCCCTGGCCGGCATGGGCGACGCTACCTTCAA
AGTCGACTTACTTGTGCTCCCCGCCTTTCAGCCCGAAGAGGATGGGGAGG
ATGTCCAGTTGGCTGTGGATACCCAACCCATTCTGGCTGCTTGGGATAGT
GCCTTGGGTGGCGCCATCGCCGACCTCGTCCAAACTAAGGACTTCAAGGG
CAAGGCTGGCTCGGCCGCACGTGTCCGCCTTGGCAATAATTCCGCGGTTA
AGAGCTTGACATTAGTGGGAATGGGTAAGAAGAGTCAATTCAAAAGTGCA
CGTGCTATGGGACCGGCGGCCGCTACGGACATAAAGGCGGAGAAGCCGAA
GACGGTTGCGGTGGTGCTGCCCGGAGGAGATTGTTTGGGTGCTGTAGCGG
AGGACATGCTCTCAGGTCTTTATTTGGATAATCGGTTCAAGACGGGGGAA
GGGGTGGAAAAAGCGGCCATGGTTGAGAAGCTGTCGTTTTACGGGGTTGA
GGCGGGGAAGGATGCGGAGGGGGCCTTGAAGAAGGCACAGGCTTTTTCGG
AAGGCGTGAGGTTGACCAAGGACTTGGTTGGGGCACCTGCGAATTACGTG
ACTCCTCAGGCATTGGCGGAGACGGCGCGAAGCATCGCAGGGGAGTACGA
AGGGTGGAGTGTCAAGGTGATGGGACGGAAGGAGTGTGCTGATTTGAACA
TGGGAGCGTATCTTGCAGTGGCTCAAGGCTCGATGGACCCCCCTGAATTT
ATCCATTTGTCGTACAAACCTAAAGGAGAGGCGAAGAAGAAGTTGGTATT
GGTCGGGAAGGGATTGACCTTCGACAGTGGAGGCTACAACCTGAAGGCAG
GTGCTGGGTCCATGATTGAGTTGATGAAATTTGATATGGGAGGGGCGGGG
GCTGTGCTTGGAGCAGCGAAGATCCTTGCAGGTTTGGCTCCGGAGGGAGT
GGAAGTGCATGTGATTGTGGCGGCGTGTGAGAATATGATTAGCGCGCAGG
CGTACCGGCCTGGCGATATATTGAAAGCATCGAATGGAAAGACAATTGAG
GTATTGAACACGGATGCCGAGGGAAGGTTGACATTGGCAGACGCCTTGGT
ATACGCCGAGAAACTCGACCCGGACGCGATTGTTGATGCGGCAACTCTCA
CTGGTGCGTGTATCATTGCGCTAGGAGGGGAATACGGTGGGATGTGGACT
GGGGATGATAACTTAGCTGCTGCCCTCGAGGCAGCAGCGACGACGAAGGG
GGAGAATTTCTGGAGGATGCCGCTGGCAGAAGAGTATAAGCCGAACATCA
AGAGTGAGATTGCGGACTTGAAGAATGTGGGCGGAAGGGAGGGGGGCTCC
ATCACGGCGGCGTTGTTTTTGCAGGAGTTTGTGACGAAGAAAACGCCGTG
GGCCCATTTGGATATTGCGGGGCCTGTGTGGAACCCGAAGAAGGGGGGGG
CGACGGGGTTTGGTGCTAGAACGTTGGCGCAGTGGGTGTTGTCGCAGGCA
TCATTGTAG
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Synonyms
Publications