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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr13 | genome | chr13:419283..421091 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO13G01370.1 vs.
Match: EWM21808.1 (leucyl aminopeptidase [Nannochloropsis gaditana]) HSP 1 Score: 891.3 bits (2302), Expect = 1.600e-255 Identity = 466/601 (77.54%), Postives = 517/601 (86.02%), Query Frame = 0
Query: 1 MLSRSPRWCVTTMMITLLLRSTSAGMARRGA-GAAFMAPSGVIFPPLATTTTTSSRTPFSSPSAALPARRGGAAMWPFSSATRLFSTTNADTGISWRTQAPSVAKLESLAGMGDATFKVDLLVLPAFQPEEDGEDVQLAVDTQPILAAWDSALGGAIADLVQTKDFKGKAGSAARVRLGNNSAVKSLTLVGMGKKSQFKSARAMGPAAATDIKAEKPKTVAVVLPGGDCLGAVAEDMLSGLYLDNRFKTGEGVEKAAMVEKLSFYGVEAGKDAEGALKKAQAFSEGVRLTKDLVGAPANYVTPQALAETARSIAGEYEGWSVKVMGRKECADLNMGAYLAVAQGSMDPPEFIHLSYKPKGEAKKKLVLVGKGLTFDSGGYNLKAGAGSMIELMKFDMGGAGAVLGAAKILAGLAPEGVEVHVIVAACENMISAQAYRPGDILKASNGKTIEVLNTDAEGRLTLADALVYAEKLDPDAIVDAATLTGACIIALGGEYGGMWTGDDNLAAALEAAATTKGENFWRMPLAEEYKPNIKSEIADLKNVGGREGGSITAALFLQEFVTKKTPWAHLDIAGPVWNPKKGGATGFGARTLAQWVLSQA 601
ML RS C T+ + RS S ARRGA F+APSG IFPP+A S + S+PS++ RRGG +WPF RLFS+T +++ I R+Q P+VAKL+S +G+GDATFK DLLVLPAFQ EEDG+DV+LAV Q ILAAWD ALGGA+ DL++TKDFKGKAGS ARVRLG + VKSLTLVGMGKKS FK++RA+GPAAATDIKAEKPKT+AVVLP D LG V+E++LSGLYLDNRFKTGEGVEKAA VE L+F+G AG+D AL++AQAF+EGVRLTKDLVGAPANYVTP+ALA+TAR+IA E+ GW VKVMG++EC L MGAYLAVAQGS DPPEFIHLSYKP G KKKLVLVGKGLTFDSGGYNLKAGAGSMIELMKFDMGGAGAVLGAAK+LAGLA EGVEVHVIVAACENMISAQAYRPGDIL+ASNGKTIEVLNTDAEGRLTLADALVYAEKL PDAIVD ATLTGACIIALGG+YGGMWTGDD LA++LEAAA+ KGE FWRMPLAEEYKPNIKSEIADLKNVGGREGGSITAALFLQEFV+K TPWAHLDIAGPVWNPKKGGATGFGARTLA+WVLSQA
Sbjct: 1 MLFRSSICCFMTIATSAFQRSVSGAAARRGAIVGGFLAPSGAIFPPVAGKNIQSRTSRSSTPSSSFVGRRGGGGLWPFHGTIRLFSSTLSNS-IPLRSQPPAVAKLQSFSGVGDATFKGDLLVLPAFQSEEDGDDVRLAVSGQAILAAWDEALGGAVTDLIETKDFKGKAGSVARVRLGRGAEVKSLTLVGMGKKSTFKNSRALGPAAATDIKAEKPKTIAVVLPSEDDLGLVSEEVLSGLYLDNRFKTGEGVEKAAQVESLTFFG--AGEDQAPALRQAQAFAEGVRLTKDLVGAPANYVTPKALADTARAIAEEHAGWEVKVMGQRECEALKMGAYLAVAQGSKDPPEFIHLSYKPPGVPKKKLVLVGKGLTFDSGGYNLKAGAGSMIELMKFDMGGAGAVLGAAKVLAGLASEGVEVHVIVAACENMISAQAYRPGDILQASNGKTIEVLNTDAEGRLTLADALVYAEKLKPDAIVDVATLTGACIIALGGDYGGMWTGDDTLASSLEAAASAKGERFWRMPLAEEYKPNIKSEIADLKNVGGREGGSITAALFLQEFVSKTTPWAHLDIAGPVWNPKKGGATGFGARTLAEWVLSQA 598
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO13G01370.1 ID=NO13G01370.1|Name=NO13G01370.1|organism=Nannochloropsis oceanica|type=mRNA|length=1809bp ATGCTCTCCCGGTCGCCCCGGTGGTGCGTTACGACAATGATGATAACGCT TTTGCTGCGCTCCACCTCAGCTGGGATGGCCCGCCGTGGTGCTGGAGCCG CTTTCATGGCCCCCTCAGGCGTTATTTTCCCTCCCTTGGCGACCACAACC ACGACTAGTAGCCGCACTCCATTCTCGTCTCCCTCTGCTGCCCTGCCGGC GCGTCGTGGAGGTGCGGCGATGTGGCCTTTCTCGAGCGCCACCCGTCTGT TTTCCACCACCAATGCCGACACAGGCATCTCCTGGCGTACCCAAGCCCCG AGCGTCGCCAAGCTCGAGTCCCTGGCCGGCATGGGCGACGCTACCTTCAA AGTCGACTTACTTGTGCTCCCCGCCTTTCAGCCCGAAGAGGATGGGGAGG ATGTCCAGTTGGCTGTGGATACCCAACCCATTCTGGCTGCTTGGGATAGT GCCTTGGGTGGCGCCATCGCCGACCTCGTCCAAACTAAGGACTTCAAGGG CAAGGCTGGCTCGGCCGCACGTGTCCGCCTTGGCAATAATTCCGCGGTTA AGAGCTTGACATTAGTGGGAATGGGTAAGAAGAGTCAATTCAAAAGTGCA CGTGCTATGGGACCGGCGGCCGCTACGGACATAAAGGCGGAGAAGCCGAA GACGGTTGCGGTGGTGCTGCCCGGAGGAGATTGTTTGGGTGCTGTAGCGG AGGACATGCTCTCAGGTCTTTATTTGGATAATCGGTTCAAGACGGGGGAA GGGGTGGAAAAAGCGGCCATGGTTGAGAAGCTGTCGTTTTACGGGGTTGA GGCGGGGAAGGATGCGGAGGGGGCCTTGAAGAAGGCACAGGCTTTTTCGG AAGGCGTGAGGTTGACCAAGGACTTGGTTGGGGCACCTGCGAATTACGTG ACTCCTCAGGCATTGGCGGAGACGGCGCGAAGCATCGCAGGGGAGTACGA AGGGTGGAGTGTCAAGGTGATGGGACGGAAGGAGTGTGCTGATTTGAACA TGGGAGCGTATCTTGCAGTGGCTCAAGGCTCGATGGACCCCCCTGAATTT ATCCATTTGTCGTACAAACCTAAAGGAGAGGCGAAGAAGAAGTTGGTATT GGTCGGGAAGGGATTGACCTTCGACAGTGGAGGCTACAACCTGAAGGCAG GTGCTGGGTCCATGATTGAGTTGATGAAATTTGATATGGGAGGGGCGGGG GCTGTGCTTGGAGCAGCGAAGATCCTTGCAGGTTTGGCTCCGGAGGGAGT GGAAGTGCATGTGATTGTGGCGGCGTGTGAGAATATGATTAGCGCGCAGG CGTACCGGCCTGGCGATATATTGAAAGCATCGAATGGAAAGACAATTGAG GTATTGAACACGGATGCCGAGGGAAGGTTGACATTGGCAGACGCCTTGGT ATACGCCGAGAAACTCGACCCGGACGCGATTGTTGATGCGGCAACTCTCA CTGGTGCGTGTATCATTGCGCTAGGAGGGGAATACGGTGGGATGTGGACT GGGGATGATAACTTAGCTGCTGCCCTCGAGGCAGCAGCGACGACGAAGGG GGAGAATTTCTGGAGGATGCCGCTGGCAGAAGAGTATAAGCCGAACATCA AGAGTGAGATTGCGGACTTGAAGAATGTGGGCGGAAGGGAGGGGGGCTCC ATCACGGCGGCGTTGTTTTTGCAGGAGTTTGTGACGAAGAAAACGCCGTG GGCCCATTTGGATATTGCGGGGCCTGTGTGGAACCCGAAGAAGGGGGGGG CGACGGGGTTTGGTGCTAGAACGTTGGCGCAGTGGGTGTTGTCGCAGGCA TCATTGTAG back to topprotein sequence of NO13G01370.1 >NO13G01370.1-protein ID=NO13G01370.1-protein|Name=NO13G01370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=603bp MLSRSPRWCVTTMMITLLLRSTSAGMARRGAGAAFMAPSGVIFPPLATTT TTSSRTPFSSPSAALPARRGGAAMWPFSSATRLFSTTNADTGISWRTQAP SVAKLESLAGMGDATFKVDLLVLPAFQPEEDGEDVQLAVDTQPILAAWDS ALGGAIADLVQTKDFKGKAGSAARVRLGNNSAVKSLTLVGMGKKSQFKSA RAMGPAAATDIKAEKPKTVAVVLPGGDCLGAVAEDMLSGLYLDNRFKTGE GVEKAAMVEKLSFYGVEAGKDAEGALKKAQAFSEGVRLTKDLVGAPANYV TPQALAETARSIAGEYEGWSVKVMGRKECADLNMGAYLAVAQGSMDPPEF IHLSYKPKGEAKKKLVLVGKGLTFDSGGYNLKAGAGSMIELMKFDMGGAG AVLGAAKILAGLAPEGVEVHVIVAACENMISAQAYRPGDILKASNGKTIE VLNTDAEGRLTLADALVYAEKLDPDAIVDAATLTGACIIALGGEYGGMWT GDDNLAAALEAAATTKGENFWRMPLAEEYKPNIKSEIADLKNVGGREGGS ITAALFLQEFVTKKTPWAHLDIAGPVWNPKKGGATGFGARTLAQWVLSQA SL* back to topmRNA from alignment at chr13:419283..421091- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO13G01370.1 ID=NO13G01370.1|Name=NO13G01370.1|organism=Nannochloropsis oceanica|type=mRNA|length=1809bp|location=Sequence derived from alignment at chr13:419283..421091- (Nannochloropsis oceanica) ATGCTCTCCCGGTCGCCCCGGTGGTGCGTTACGACAATGATGATAACGCT
TTTGCTGCGCTCCACCTCAGCTGGGATGGCCCGCCGTGGTGCTGGAGCCG
CTTTCATGGCCCCCTCAGGCGTTATTTTCCCTCCCTTGGCGACCACAACC
ACGACTAGTAGCCGCACTCCATTCTCGTCTCCCTCTGCTGCCCTGCCGGC
GCGTCGTGGAGGTGCGGCGATGTGGCCTTTCTCGAGCGCCACCCGTCTGT
TTTCCACCACCAATGCCGACACAGGCATCTCCTGGCGTACCCAAGCCCCG
AGCGTCGCCAAGCTCGAGTCCCTGGCCGGCATGGGCGACGCTACCTTCAA
AGTCGACTTACTTGTGCTCCCCGCCTTTCAGCCCGAAGAGGATGGGGAGG
ATGTCCAGTTGGCTGTGGATACCCAACCCATTCTGGCTGCTTGGGATAGT
GCCTTGGGTGGCGCCATCGCCGACCTCGTCCAAACTAAGGACTTCAAGGG
CAAGGCTGGCTCGGCCGCACGTGTCCGCCTTGGCAATAATTCCGCGGTTA
AGAGCTTGACATTAGTGGGAATGGGTAAGAAGAGTCAATTCAAAAGTGCA
CGTGCTATGGGACCGGCGGCCGCTACGGACATAAAGGCGGAGAAGCCGAA
GACGGTTGCGGTGGTGCTGCCCGGAGGAGATTGTTTGGGTGCTGTAGCGG
AGGACATGCTCTCAGGTCTTTATTTGGATAATCGGTTCAAGACGGGGGAA
GGGGTGGAAAAAGCGGCCATGGTTGAGAAGCTGTCGTTTTACGGGGTTGA
GGCGGGGAAGGATGCGGAGGGGGCCTTGAAGAAGGCACAGGCTTTTTCGG
AAGGCGTGAGGTTGACCAAGGACTTGGTTGGGGCACCTGCGAATTACGTG
ACTCCTCAGGCATTGGCGGAGACGGCGCGAAGCATCGCAGGGGAGTACGA
AGGGTGGAGTGTCAAGGTGATGGGACGGAAGGAGTGTGCTGATTTGAACA
TGGGAGCGTATCTTGCAGTGGCTCAAGGCTCGATGGACCCCCCTGAATTT
ATCCATTTGTCGTACAAACCTAAAGGAGAGGCGAAGAAGAAGTTGGTATT
GGTCGGGAAGGGATTGACCTTCGACAGTGGAGGCTACAACCTGAAGGCAG
GTGCTGGGTCCATGATTGAGTTGATGAAATTTGATATGGGAGGGGCGGGG
GCTGTGCTTGGAGCAGCGAAGATCCTTGCAGGTTTGGCTCCGGAGGGAGT
GGAAGTGCATGTGATTGTGGCGGCGTGTGAGAATATGATTAGCGCGCAGG
CGTACCGGCCTGGCGATATATTGAAAGCATCGAATGGAAAGACAATTGAG
GTATTGAACACGGATGCCGAGGGAAGGTTGACATTGGCAGACGCCTTGGT
ATACGCCGAGAAACTCGACCCGGACGCGATTGTTGATGCGGCAACTCTCA
CTGGTGCGTGTATCATTGCGCTAGGAGGGGAATACGGTGGGATGTGGACT
GGGGATGATAACTTAGCTGCTGCCCTCGAGGCAGCAGCGACGACGAAGGG
GGAGAATTTCTGGAGGATGCCGCTGGCAGAAGAGTATAAGCCGAACATCA
AGAGTGAGATTGCGGACTTGAAGAATGTGGGCGGAAGGGAGGGGGGCTCC
ATCACGGCGGCGTTGTTTTTGCAGGAGTTTGTGACGAAGAAAACGCCGTG
GGCCCATTTGGATATTGCGGGGCCTGTGTGGAACCCGAAGAAGGGGGGGG
CGACGGGGTTTGGTGCTAGAACGTTGGCGCAGTGGGTGTTGTCGCAGGCA
TCATTGTAG back to topCoding sequence (CDS) from alignment at chr13:419283..421091- >NO13G01370.1 ID=NO13G01370.1|Name=NO13G01370.1|organism=Nannochloropsis oceanica|type=CDS|length=1809bp|location=Sequence derived from alignment at chr13:419283..421091- (Nannochloropsis oceanica) ATGCTCTCCCGGTCGCCCCGGTGGTGCGTTACGACAATGATGATAACGCT TTTGCTGCGCTCCACCTCAGCTGGGATGGCCCGCCGTGGTGCTGGAGCCG CTTTCATGGCCCCCTCAGGCGTTATTTTCCCTCCCTTGGCGACCACAACC ACGACTAGTAGCCGCACTCCATTCTCGTCTCCCTCTGCTGCCCTGCCGGC GCGTCGTGGAGGTGCGGCGATGTGGCCTTTCTCGAGCGCCACCCGTCTGT TTTCCACCACCAATGCCGACACAGGCATCTCCTGGCGTACCCAAGCCCCG AGCGTCGCCAAGCTCGAGTCCCTGGCCGGCATGGGCGACGCTACCTTCAA AGTCGACTTACTTGTGCTCCCCGCCTTTCAGCCCGAAGAGGATGGGGAGG ATGTCCAGTTGGCTGTGGATACCCAACCCATTCTGGCTGCTTGGGATAGT GCCTTGGGTGGCGCCATCGCCGACCTCGTCCAAACTAAGGACTTCAAGGG CAAGGCTGGCTCGGCCGCACGTGTCCGCCTTGGCAATAATTCCGCGGTTA AGAGCTTGACATTAGTGGGAATGGGTAAGAAGAGTCAATTCAAAAGTGCA CGTGCTATGGGACCGGCGGCCGCTACGGACATAAAGGCGGAGAAGCCGAA GACGGTTGCGGTGGTGCTGCCCGGAGGAGATTGTTTGGGTGCTGTAGCGG AGGACATGCTCTCAGGTCTTTATTTGGATAATCGGTTCAAGACGGGGGAA GGGGTGGAAAAAGCGGCCATGGTTGAGAAGCTGTCGTTTTACGGGGTTGA GGCGGGGAAGGATGCGGAGGGGGCCTTGAAGAAGGCACAGGCTTTTTCGG AAGGCGTGAGGTTGACCAAGGACTTGGTTGGGGCACCTGCGAATTACGTG ACTCCTCAGGCATTGGCGGAGACGGCGCGAAGCATCGCAGGGGAGTACGA AGGGTGGAGTGTCAAGGTGATGGGACGGAAGGAGTGTGCTGATTTGAACA TGGGAGCGTATCTTGCAGTGGCTCAAGGCTCGATGGACCCCCCTGAATTT ATCCATTTGTCGTACAAACCTAAAGGAGAGGCGAAGAAGAAGTTGGTATT GGTCGGGAAGGGATTGACCTTCGACAGTGGAGGCTACAACCTGAAGGCAG GTGCTGGGTCCATGATTGAGTTGATGAAATTTGATATGGGAGGGGCGGGG GCTGTGCTTGGAGCAGCGAAGATCCTTGCAGGTTTGGCTCCGGAGGGAGT GGAAGTGCATGTGATTGTGGCGGCGTGTGAGAATATGATTAGCGCGCAGG CGTACCGGCCTGGCGATATATTGAAAGCATCGAATGGAAAGACAATTGAG GTATTGAACACGGATGCCGAGGGAAGGTTGACATTGGCAGACGCCTTGGT ATACGCCGAGAAACTCGACCCGGACGCGATTGTTGATGCGGCAACTCTCA CTGGTGCGTGTATCATTGCGCTAGGAGGGGAATACGGTGGGATGTGGACT GGGGATGATAACTTAGCTGCTGCCCTCGAGGCAGCAGCGACGACGAAGGG GGAGAATTTCTGGAGGATGCCGCTGGCAGAAGAGTATAAGCCGAACATCA AGAGTGAGATTGCGGACTTGAAGAATGTGGGCGGAAGGGAGGGGGGCTCC ATCACGGCGGCGTTGTTTTTGCAGGAGTTTGTGACGAAGAAAACGCCGTG GGCCCATTTGGATATTGCGGGGCCTGTGTGGAACCCGAAGAAGGGGGGGG CGACGGGGTTTGGTGCTAGAACGTTGGCGCAGTGGGTGTTGTCGCAGGCA TCATTGTAG back to top
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