NO13G00970.1, NO13G00970.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO13G00970.1
Unique Name	NO13G00970.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4934
Alignment location	chr13:313537..318690 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr13	genome	chr13:313537..318690 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO13G00970.1 vs.
Match: XP_005854716.1 (t-complex protein 1 subunit alpha [Nannochloropsis gaditana CCMP526]; EKU21643.1 t-complex protein 1 subunit alpha [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 945.3 bits (2442), Expect = 9.300e-272
Identity = 512/598 (85.62%), Postives = 552/598 (92.31%), Query Frame = 0

Query:    1 MAASAGQMLLDGERTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVKFIKEKLVVPVDQLQQDNLLNAARTSMSSKILGPESDFFAQLAVDAVQSVKTESTHSETGKIGVKYPVSAIHILKCHGQSSLSSHLVDGFAIAGGRAAQGMPTSVTPAKIALLDFSLQRHKMQLGVSVVVKDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIAKATGGQVVGTLADMEGNEAFDPGMLGVADMVEERRVGDGEMLYIRLKEGGKGVGRAATIVLRGANDYMLDEMDRALHDSLMVVKRMLESNSLVAGGGAVEAALSIHLEEYAMTLGSKEQLAIAAFSEALLVIPRTLAVNAAQDATELVANLRAAHFKAQQQESTSTGQQAPGGMEPMGGGAALGEEGDGGGKAKK---NGQKDDLWYAGLDLFEGVVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDLIKLTERSPGPPGGMQGMQ 596
            MAASAGQMLLDG+RTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAV+FIK+KLVV VDQL+Q+NLLNAARTSMSSKILG E+DFFA+LAV+AV SVK +S H ++GK   KYPVSAIHILKCHGQSSLSSHLV+GFA+AG RAAQGMPTSV+PAKIALLDFSLQRHKMQ+GVSVVV+DVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIA+ATGGQV+GTLADMEGNEAFDP MLG+A+ VEERRVGDGEMLYI     G   G+AAT+VLRGANDYMLDEMDRALHD+LMV+KRMLESNSLVAGGGAVEAALS+HLE+YAMTLGSKEQLAIAAFS+ALLVIPRTLAVNAAQDATELVANLRAAHF AQQQ+   + Q +    E  GGGAA+ E  DGGG+  K    G ++ +WYAGLDL++G+VRNNLAAGVVEPAISKIKSLRFATEAAITILRIDD+IKLTE+SPGPP G  GMQ
Sbjct:    1 MAASAGQMLLDGQRTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVAAELLKRGNELVMNKVHPTSIMSGYRLALKEAVRFIKDKLVVSVDQLRQENLLNAARTSMSSKILGAEADFFAKLAVEAVLSVKADSQHRDSGKTVSKYPVSAIHILKCHGQSSLSSHLVNGFALAGARAAQGMPTSVSPAKIALLDFSLQRHKMQMGVSVVVEDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGIDDLAMKYFVEAGAMAVRRVKKEDLKRIARATGGQVIGTLADMEGNEAFDPSMLGLAERVEERRVGDGEMLYIL----GAKEGKAATVVLRGANDYMLDEMDRALHDALMVIKRMLESNSLVAGGGAVEAALSVHLEKYAMTLGSKEQLAIAAFSDALLVIPRTLAVNAAQDATELVANLRAAHFGAQQQQQQPSSQPSQVPPERAGGGAAMVE--DGGGEISKKAGGGAEEGMWYAGLDLYKGLVRNNLAAGVVEPAISKIKSLRFATEAAITILRIDDMIKLTEKSPGPPDGRGGMQ 592

The following BLAST results are available for this feature:

BLAST of NO13G00970.1 vs.

BLAST of NO13G00970.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005854716.1	9.300e-272	85.62	t-complex protein 1 subunit alpha [Nannochloropsis...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO13G00970	NO13G00970	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO13G00970.1	NO13G00970.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO13G00970.1.cds1	NO13G00970.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G00970.1.cds2	NO13G00970.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr13:313537..318690-
coding sequence from alignment at chr13:313537..318690-

mRNA sequence

>NO13G00970.1 ID=NO13G00970.1|Name=NO13G00970.1|organism=Nannochloropsis oceanica|type=mRNA|length=4934bp
TATTCTCGTCGTCCCTTAGATCCTATCAAAATATGCGTGAAAAGCGTGGG
GAGGGGTGGATGATTCCGGTCGTGTGTCTGTTGCCCCGCCCCCTGCTTGT
TGTTGTTGAGCTTTGCGAATGCAATGTGCCGCTTGGTGGGTTGCCGCCAC
CAGTCCCGAAACCAGCGCCACGATCGTATAAATTGCCTTGTGCTACCAAT
GGCTGCACTGCTCTCCAGCATTGAGGCGACCAGTGGCAGGCTACAGGGCA
GAGACGATGCCCTCCATCTTTCTGCCTGTTTTATGATGATTTCTTGTCTC
TTTCCTCTCGCTCCTCGAGAGGCCTCGTTTGTCTCGCCCATAAAAATTGT
TCAAATACTACCATTACAATCATTGCAAAGGGTTTCCTCATGTGAAACAA
TCAATGGAGCAAACGCGACTGTACGTTTTAATTTCTGGCGGTCGCATTGT
ATCACTTTCATGAATTGCTCGCTGCTCAGCTGTCTCCCTTTATTTCTTTT
TTGGTGGTGCGAGGGTCGAATTTGTTATTTCTGTTGTGATTCCCGGAGGC
ATCCGTCGGGTCTCATAGTCAAGTTTTTGTCTGTTTCAAGTTTGTGCATA
AAGTCTCTAGTATGGTGCTTTGCCTTTCGTCCGGGGGGGAGGTTGATAAA
GGGGGGGGGAGGACTGGCACCATGCAAATGTCGGACGAAAACTTTATGGA
TGAGGCCCTGGACATGTAATTATTCATACGTTCGAGTACTTCATCCATAT
CTGTGATAACACGTCACTTTGTACATTAAAATCGAGTCCTGACTAAGTTG
TGAGTGCATGTCGTCCGTCCATGATGAAATCCACGCCCTAACGAAGTTCA
TGCTTGAACACAGGACAGGTTGAGTGGTGAATCAAGTAAACAAAGTGCTA
CTCGTCCAACGTGCAGACAGGTGATCGATTGGTGTGTTTCGGGGCCATCC
TGACGTTTAGAATTCGCTTTTGACACCTGCTCTCGATTTTTTTTTGTTCT
TGCTGTGTTTCTCGGTCGGTGGAGGGGATCCCTAGGATGGAGGGCGATCG
GTTGGATGGGAGTGTCGTGAATGGGTTGGTGTTTGTAGGTTGTCAGCCGA
GGTGGCATGAATCGATGGGCGTGTCGATGTAGTTTAGGACCAAAATTATC
ATGCGCCATACTACCACTCGTCTCCCCTCAGGTCTTACCTGCCTCTCGTC
CTGATAAAGGTAGGCGCGCATGGGTGAAACGACGATCAAATAAAGGAGAA
ACAGGCCGTCGACGTCAAGACAGCTACTTCTTCCATGTCAAATCCCTGCG
CCAACGCGATTGGCCCACACACGCCCCTCCTACGCCGCGACTCTTCCTCG
GCCTCGAATCCTGCCTTGGCGACCGCGGTTCGCTTTCGTCCCGCTCCTGC
TCCACGGTCATGCGTCTCATCTCTTGCTGATACCACCGTTGTTCCTGCTT
GATCTCGCACTCCAACCGCCCGCTTCTCCTGGTGCAATCGCCGGGCCTCC
TGGTGCTCTTGCCACATGCGGGTCATCGTCGAGCCATGGCGCTTCTGTAA
CACGCGCCCCGTGGCGCCCCTTTTCTCTCCCCTTTTCGATGCCTTTATTT
CCTCCTTCTCCGTCATTCTTGTTTGCTATCCTCTTCCGCTGCTTCATACT
CCTGGACTAGGCCAGCACTCCCTCGCTCCGTCCCCCTGGCGCGGAGCACG
GCGGCCCATATGGCGGTGATGGTAGTGGTAGAGGGCGGAGGAGATTGCGG
CCAAGGGTATAATCAATGGCCTCAGCCTGAAGGCAAAGCACGCGAGGCAT
CTTTATGGGGCTGGATGTTGTAAAAGTGTATATGTTGTAGATGAGGCAGG
CGAGCTCGATTTTTTCTTTTACGGAGTAGGTTGATGGAGACGGCACGGGC
ATTGATCAGTGAGGCAGCTAGCTTATCAAGCATGTGGTCTGCAAAGTGTT
CAGCTCCGTGCTTGGCGTGATAGAGTTTGAGGAGCTGGAGTTGAACAGTC
TCTTGGGCGGTGGAGGAGGGGAGCAGGGCATGGAAACGGCTTCTTTTCGT
CATCATCTCGGTTATTGTGGGTGGCGGACAGGCCCTCCGGACGGGCGTCG
CCGGCTTGAGCAATGGTCATGGTTTCCCTTACCTGTGTTTGGATAGCATG
GGACAGTGATGTGTCGAAGCTTCACGTTATCATTGATTTTCCTCCAGATT
GGGTTTATTTTTACTTGATGTCTTGACTGAAAATCGCCCACCGTCTCCCT
TTCTTTTCCGTGCCTCTTATCATGGACTTGGTCCTCTCTCATCACGCTGC
CACAAGCAGCGGTAGCACGAAGGTGAAGACAACGATTATGTGTACCTGAT
CTTGCGGGATCTATGCGGTTAAGTATGCTTTTCTTAACGCACTTTTTGGT
GCCGCCGCACGCCGCACCGCCCCGCCGCGCAGACATTTGTTCTACCGGGC
GGCGGCGTCGTACACAAGGAGCTGGTTTGGCTGCAAACGCACGCAGACTT
AGCATCATAATGCTATTCATGACACGATATTCATGCAGGAGACACGCTGT
GAGCGGAAAGAGCCCATGGATGGACTCTCTCAAACTAACGCGTCCCATCA
AAATACTCATCACTTTTCGCCTCCCCTCCATTCCTCCCTTCCCACTCCCA
AGAAGCACATAGCGACACGCACCTTGTCTAATCATAGCATCAGCACCTCC
ACAACTTTATCCCTTACATCAAAACCATGGCAGCTTCTGCGGGTCAGATG
CTCCTGGACGGAGAACGCACGTCGGGGCAGGACGTCCGCACCGCCAACGT
GACCGCCTCCATGGCCATCGCCAACATCGTTAAGTCTTCCCTTGGGCCCG
TCGGCCTTGACAAGATGCTTGTAGATGACATCGGTGATGTCACCATTACG
AATGATGGAGCGACGATCCTGCAGCAGTTGGAAGTGGAGCATCCTGCTGC
CAAAGTGTTGGTCGAGCTAGCGCACCTCCAAGACCAGGAAGTAGGGGATG
GGACGACGTCTGTCGTTATCGTCGCTGCGGAGCTCTTGAAGAGGGGGAAT
GAGCTGGTGATGAATAAGGTGCATCCTACCAGCATTATGAGTGGATATCG
GCTGGCGCTGAAGGAGGCGGTGAAGTTTATCAAGGAGAAGCTTGTGGTGC
CAGTGGACCAGCTGCAACAAGATAACCTGCTCAATGCCGCCCGCACCTCC
ATGAGCAGCAAAATCCTGGGGCCCGAATCCGACTTTTTTGCTCAATTGGC
TGTCGATGCTGTTCAGTCCGTGAAGACCGAAAGTACCCACAGCGAGACAG
GGAAAATAGGCGTCAAATACCCTGTTTCGGCCATCCACATTCTTAAATGC
CATGGCCAGTCCTCGCTCTCCTCCCACCTCGTCGATGGCTTTGCGATTGC
CGGGGGCCGTGCGGCCCAGGGGATGCCCACGTCTGTAACGCCCGCGAAAA
TTGCCTTGCTTGACTTCAGCTTACAACGGCACAAGATGCAGCTGGGGGTG
AGTGTGGTGGTCAAGGACGTGAAGGAGGTCGAGTTGATCCGGCAGAGGGA
AATGGATATTACAAAGGAGCGGATCCAGAAGATCTTGGAGGCGGGTGCAA
ACGTCGTGCTGACGACGAAGGGAATCGACGACCTGGCCATGAAGTATTTT
GTGGAGGCCGGGGCCATGGCGGTGCGGAGGGTGAAGAAAGAAGACTTGAA
ACGAATTGCCAAGGCAACGGGGGGGCAGGTGGTGGGCACCTTAGCGGATA
TGGAGGGGAATGAAGCGTTTGATCCGGGTATGCTGGGGGTGGCGGATATG
GTGGAGGAACGAAGGGTGGGGGATGGGGAGATGCTTTACATCAGGTTGAA
GGAGGGAGGGAAAGGGGTGGGGAGGGCGGCGACAATCGTGTTGCGGGGAG
CGAATGATTACATGCTCGATGAAATGGACAGGGCGTTGCACGATAGCCTG
ATGGTGGTCAAACGGATGCTTGAGAGCAATTCCTTGGTCGCGGGGGGCGG
GGCCGTGGAGGCAGCCTTGTCCATCCACTTGGAGGAATATGCCATGACGT
TGGGAAGCAAAGAGCAATTAGCCATTGCCGCATTTTCGGAGGCCTTGCTG
GTCATCCCTCGGACTCTGGCTGTGAACGCGGCGCAGGATGCCACCGAACT
AGTTGCCAACCTGCGGGCGGCCCATTTCAAGGCCCAGCAGCAGGAGTCGA
CGTCGACTGGACAGCAGGCCCCTGGGGGCATGGAACCGATGGGAGGGGGG
GCGGCGTTGGGAGAGGAAGGGGATGGGGGAGGGAAGGCGAAGAAGAATGG
ACAGAAGGATGATTTGTGGTATGCAGGCTTGGATTTATTTGAGGGTGTGG
TGAGGAATAATCTTGCGGCGGGGGTCGTGGAGCCGGCGATCAGTAAGATT
AAGAGTTTGAGGTTTGCCACGGAGGCGGCGATTACGATTTTGAGGATTGA
TGACTTGATCAAGCTGACAGAAAGGAGCCCAGGGCCGCCGGGGGGGATGC
AGGGGATGCAGTAATCCAATGGGGTTGAAAGAGTGAAGATTTCGATGTCT
ATTATTTCCTCCATTTTCCTGTCTTCCTGGTTCGCGGAGAAGGGGGAGCA
GGAGTAGGAAGAGGAGGGCATGGGCATTGAATAATTTGTTTGAGTATGGG
GAGGACCGAACAAGAAATCGGTATTTCTGTGTAGTGACGGGATGGGTTGC
AGCGAGAGAAAGGCAGAAGGCAGGAGGAGAATTAGAATATAGCCGACGAT
GACCGTTCATTCGTTAATCAATGAGGAAGTCGATAGCGAGAAAGAAAAAG
ACAAACCAAAGAAAGTTGAGTGAAAAGGATATGGTAATAACAACACAACA
AATAAAATGGAGAAACCAAAAAAGGAGGATAAAAAACGACGACCAAACGA
GTAGTTTGAGTACTGTTCTTGCGTGATTCTTCTT

protein sequence of NO13G00970.1

>NO13G00970.1-protein ID=NO13G00970.1-protein|Name=NO13G00970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=596bp
MAASAGQMLLDGERTSGQDVRTANVTASMAIANIVKSSLGPVGLDKMLVD
DIGDVTITNDGATILQQLEVEHPAAKVLVELAHLQDQEVGDGTTSVVIVA
AELLKRGNELVMNKVHPTSIMSGYRLALKEAVKFIKEKLVVPVDQLQQDN
LLNAARTSMSSKILGPESDFFAQLAVDAVQSVKTESTHSETGKIGVKYPV
SAIHILKCHGQSSLSSHLVDGFAIAGGRAAQGMPTSVTPAKIALLDFSLQ
RHKMQLGVSVVVKDVKEVELIRQREMDITKERIQKILEAGANVVLTTKGI
DDLAMKYFVEAGAMAVRRVKKEDLKRIAKATGGQVVGTLADMEGNEAFDP
GMLGVADMVEERRVGDGEMLYIRLKEGGKGVGRAATIVLRGANDYMLDEM
DRALHDSLMVVKRMLESNSLVAGGGAVEAALSIHLEEYAMTLGSKEQLAI
AAFSEALLVIPRTLAVNAAQDATELVANLRAAHFKAQQQESTSTGQQAPG
GMEPMGGGAALGEEGDGGGKAKKNGQKDDLWYAGLDLFEGVVRNNLAAGV
VEPAISKIKSLRFATEAAITILRIDDLIKLTERSPGPPGGMQGMQ*

mRNA from alignment at chr13:313537..318690-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO13G00970.1 ID=NO13G00970.1|Name=NO13G00970.1|organism=Nannochloropsis oceanica|type=mRNA|length=5154bp|location=Sequence derived from alignment at chr13:313537..318690- (Nannochloropsis oceanica)
TATTCTCGTCGTCCCTTAGATCCTATCAAAATATGCGTGAAAAGCGTGGG
GAGGGGTGGATGATTCCGGTCGTGTGTCTGTTGCCCCGCCCCCTGCTTGT
TGTTGTTGAGCTTTGCGAATGCAATGTGCCGCTTGGTGGGTTGCCGCCAC
CAGTCCCGAAACCAGCGCCACGATCGTATAAATTGCCTTGTGCTACCAAT
GGCTGCACTGCTCTCCAGCATTGAGGCGACCAGTGGCAGGCTACAGGGCA
GAGACGATGCCCTCCATCTTTCTGCCTGTTTTATGATGATTTCTTGTCTC
TTTCCTCTCGCTCCTCGAGAGGCCTCGTTTGTCTCGCCCATAAAAATTGT
TCAAATACTACCATTACAATCATTGCAAAGGGTTTCCTCATGTGAAACAA
TCAATGGAGCAAACGCGACTGTACGTTTTAATTTCTGGCGGTCGCATTGT
ATCACTTTCATGAATTGCTCGCTGCTCAGCTGTCTCCCTTTATTTCTTTT
TTGGTGGTGCGAGGGTCGAATTTGTTATTTCTGTTGTGATTCCCGGAGGC
ATCCGTCGGGTCTCATAGTCAAGTTTTTGTCTGTTTCAAGTTTGTGCATA
AAGTCTCTAGTATGGTGCTTTGCCTTTCGTCCGGGGGGGAGGTTGATAAA
GGGGGGGGGAGGACTGGCACCATGCAAATGTCGGACGAAAACTTTATGGA
TGAGGCCCTGGACATGTAATTATTCATACGTTCGAGTACTTCATCCATAT
CTGTGATAACACGTCACTTTGTACATTAAAATCGAGTCCTGACTAAGTTG
TGAGTGCATGTCGTCCGTCCATGATGAAATCCACGCCCTAACGAAGTTCA
TGCTTGAACACAGGACAGGTTGAGTGGTGAATCAAGTAAACAAAGTGCTA
CTCGTCCAACGTGCAGACAGGTGATCGATTGGTGTGTTTCGGGGCCATCC
TGACGTTTAGAATTCGCTTTTGACACCTGCTCTCGATTTTTTTTTGTTCT
TGCTGTGTTTCTCGGTCGGTGGAGGGGATCCCTAGGATGGAGGGCGATCG
GTTGGATGGGAGTGTCGTGAATGGGTTGGTGTTTGTAGGTTGTCAGCCGA
GGTGGCATGAATCGATGGGCGTGTCGATGTAGTTTAGGACCAAAATTATC
ATGCGCCATACTACCACTCGTCTCCCCTCAGGTCTTACCTGCCTCTCGTC
CTGATAAAGGTAGGCGCGCATGGGTGAAACGACGATCAAATAAAGGAGAA
ACAGGCCGTCGACGTCAAGACAGCTACTTCTTCCATGTCAAATCCCTGCG
CCAACGCGATTGGCCCACACACGCCCCTCCTACGCCGCGACTCTTCCTCG
GCCTCGAATCCTGCCTTGGCGACCGCGGTTCGCTTTCGTCCCGCTCCTGC
TCCACGGTCATGCGTCTCATCTCTTGCTGATACCACCGTTGTTCCTGCTT
GATCTCGCACTCCAACCGCCCGCTTCTCCTGGTGCAATCGCCGGGCCTCC
TGGTGCTCTTGCCACATGCGGGTCATCGTCGAGCCATGGCGCTTCTGTAA
CACGCGCCCCGTGGCGCCCCTTTTCTCTCCCCTTTTCGATGCCTTTATTT
CCTCCTTCTCCGTCATTCTTGTTTGCTATCCTCTTCCGCTGCTTCATACT
CCTGGACTAGGCCAGCACTCCCTCGCTCCGTCCCCCTGGCGCGGAGCACG
GCGGCCCATATGGCGGTGATGGTAGTGGTAGAGGGCGGAGGAGATTGCGG
CCAAGGGTATAATCAATGGCCTCAGCCTGAAGGCAAAGCACGCGAGGCAT
CTTTATGGGGCTGGATGTTGTAAAAGTGTATATGTTGTAGATGAGGCAGG
CGAGCTCGATTTTTTCTTTTACGGAGTAGGTTGATGGAGACGGCACGGGC
ATTGATCAGTGAGGCAGCTAGCTTATCAAGCATGTGGTCTGCAAAGTGTT
CAGCTCCGTGCTTGGCGTGATAGAGTTTGAGGAGCTGGAGTTGAACAGTC
TCTTGGGCGGTGGAGGAGGGGAGCAGGGCATGGAAACGGCTTCTTTTCGT
CATCATCTCGGTTATTGTGGGTGGCGGACAGGCCCTCCGGACGGGCGTCG
CCGGCTTGAGCAATGGTCATGGTTTCCCTTACCTGTGTTTGGATAGCATG
GGACAGTGATGTGTCGAAGCTTCACGTTATCATTGATTTTCCTCCAGATT
GGGTTTATTTTTACTTGATGTCTTGACTGAAAATCGCCCACCGTCTCCCT
TTCTTTTCCGTGCCTCTTATCATGGACTTGGTCCTCTCTCATCACGCTGC
CACAAGCAGCGGTAGCACGAAGGTGAAGACAACGATTATGTGTACCTGAT
CTTGCGGGATCTATGCGGTTAAGTATGCTTTTCTTAACGCACTTTTTGGT
GCCGCCGCACGCCGCACCGCCCCGCCGCGCAGACATTTGTTCTACCGGGC
GGCGGCGTCGTACACAAGGAGCTGGTTTGGCTGCAAACGCACGCAGACTT
AGCATCATAATGCTATTCATGACACGATATTCATGCAGGAGACACGCTGT
GAGCGGAAAGAGCCCATGGATGGACTCTCTCAAACTAACGCGTCCCATCA
AAATACTCATCACTTTTCGCCTCCCCTCCATTCCTCCCTTCCCACTCCCA
AGAAGCACATAGCGACACGCACCTTGTCTAATCATAGCATCAGCACCTCC
ACAACTTTATCCCTTACATCAAAACCATGGCAGCTTCTGCGGGTCAGATG
CTCCTGGACGGAGAACGCACGTCGGGGCAGGACGTCCGCACCGCCAACGT
GACCGCCTCCATGGCCATCGCCAACATCGTTAAGTCTTCCCTTGGGCCCG
TCGGCCTTGACAAGATGCTTGTAGATGACATCGGTGATGTCACCATTACG
AATGATGGAGCGACGATCCTGCAGCAGTTGGAAGTGGAGCATCCTGCTGC
CAAAGTGTTGGTCGAGCTAGCGCACCTCCAAGACCAGGAAGTAGGGGATG
GGACGACGTCTGTCGTTATCGTCGCTGCGGAGCTCTTGAAGAGGGGGAAT
GAGCTGGTGATGAATAAGGTGCATCCTACCAGCATTATGAGTGGATATCG
GCTGGCGCTGAAGGAGGCGGTGAAGTTTATCAAGGAGAAGCTTGTGGTGC
CAGTGGACCAGGTTAGGACTTAGGGAGGGTGGGCAGACGAGGGGGAGGGA
GGAGGAAAGGTCGTAGAGAGGCCTCCTTTCCATTTGTATATTCCTTTCTT
CAATCCGTTTTTAGCATTAATTTTTTTCGACTCAGTTTCAAAAAAACTTC
TCGCCCTTATGTGATGACACTAATCTGACCTTCCCTCTCTCCCTCCCTTC
CCCCCTTCCCTCCTCGCCCTCCCTTTTACAGCTGCAACAAGATAACCTGC
TCAATGCCGCCCGCACCTCCATGAGCAGCAAAATCCTGGGGCCCGAATCC
GACTTTTTTGCTCAATTGGCTGTCGATGCTGTTCAGTCCGTGAAGACCGA
AAGTACCCACAGCGAGACAGGGAAAATAGGCGTCAAATACCCTGTTTCGG
CCATCCACATTCTTAAATGCCATGGCCAGTCCTCGCTCTCCTCCCACCTC
GTCGATGGCTTTGCGATTGCCGGGGGCCGTGCGGCCCAGGGGATGCCCAC
GTCTGTAACGCCCGCGAAAATTGCCTTGCTTGACTTCAGCTTACAACGGC
ACAAGATGCAGCTGGGGGTGAGTGTGGTGGTCAAGGACGTGAAGGAGGTC
GAGTTGATCCGGCAGAGGGAAATGGATATTACAAAGGAGCGGATCCAGAA
GATCTTGGAGGCGGGTGCAAACGTCGTGCTGACGACGAAGGGAATCGACG
ACCTGGCCATGAAGTATTTTGTGGAGGCCGGGGCCATGGCGGTGCGGAGG
GTGAAGAAAGAAGACTTGAAACGAATTGCCAAGGCAACGGGGGGGCAGGT
GGTGGGCACCTTAGCGGATATGGAGGGGAATGAAGCGTTTGATCCGGGTA
TGCTGGGGGTGGCGGATATGGTGGAGGAACGAAGGGTGGGGGATGGGGAG
ATGCTTTACATCAGGTTGAAGGAGGGAGGGAAAGGGGTGGGGAGGGCGGC
GACAATCGTGTTGCGGGGAGCGAATGATTACATGCTCGATGAAATGGACA
GGGCGTTGCACGATAGCCTGATGGTGGTCAAACGGATGCTTGAGAGCAAT
TCCTTGGTCGCGGGGGGCGGGGCCGTGGAGGCAGCCTTGTCCATCCACTT
GGAGGAATATGCCATGACGTTGGGAAGCAAAGAGCAATTAGCCATTGCCG
CATTTTCGGAGGCCTTGCTGGTCATCCCTCGGACTCTGGCTGTGAACGCG
GCGCAGGATGCCACCGAACTAGTTGCCAACCTGCGGGCGGCCCATTTCAA
GGCCCAGCAGCAGGAGTCGACGTCGACTGGACAGCAGGCCCCTGGGGGCA
TGGAACCGATGGGAGGGGGGGCGGCGTTGGGAGAGGAAGGGGATGGGGGA
GGGAAGGCGAAGAAGAATGGACAGAAGGATGATTTGTGGTATGCAGGCTT
GGATTTATTTGAGGGTGTGGTGAGGAATAATCTTGCGGCGGGGGTCGTGG
AGCCGGCGATCAGTAAGATTAAGAGTTTGAGGTTTGCCACGGAGGCGGCG
ATTACGATTTTGAGGATTGATGACTTGATCAAGCTGACAGAAAGGAGCCC
AGGGCCGCCGGGGGGGATGCAGGGGATGCAGTAATCCAATGGGGTTGAAA
GAGTGAAGATTTCGATGTCTATTATTTCCTCCATTTTCCTGTCTTCCTGG
TTCGCGGAGAAGGGGGAGCAGGAGTAGGAAGAGGAGGGCATGGGCATTGA
ATAATTTGTTTGAGTATGGGGAGGACCGAACAAGAAATCGGTATTTCTGT
GTAGTGACGGGATGGGTTGCAGCGAGAGAAAGGCAGAAGGCAGGAGGAGA
ATTAGAATATAGCCGACGATGACCGTTCATTCGTTAATCAATGAGGAAGT
CGATAGCGAGAAAGAAAAAGACAAACCAAAGAAAGTTGAGTGAAAAGGAT
ATGGTAATAACAACACAACAAATAAAATGGAGAAACCAAAAAAGGAGGAT
AAAAAACGACGACCAAACGAGTAGTTTGAGTACTGTTCTTGCGTGATTCT
TCTT

Coding sequence (CDS) from alignment at chr13:313537..318690-

>NO13G00970.1 ID=NO13G00970.1|Name=NO13G00970.1|organism=Nannochloropsis oceanica|type=CDS|length=1788bp|location=Sequence derived from alignment at chr13:313537..318690- (Nannochloropsis oceanica)
ATGGCAGCTTCTGCGGGTCAGATGCTCCTGGACGGAGAACGCACGTCGGG
GCAGGACGTCCGCACCGCCAACGTGACCGCCTCCATGGCCATCGCCAACA
TCGTTAAGTCTTCCCTTGGGCCCGTCGGCCTTGACAAGATGCTTGTAGAT
GACATCGGTGATGTCACCATTACGAATGATGGAGCGACGATCCTGCAGCA
GTTGGAAGTGGAGCATCCTGCTGCCAAAGTGTTGGTCGAGCTAGCGCACC
TCCAAGACCAGGAAGTAGGGGATGGGACGACGTCTGTCGTTATCGTCGCT
GCGGAGCTCTTGAAGAGGGGGAATGAGCTGGTGATGAATAAGGTGCATCC
TACCAGCATTATGAGTGGATATCGGCTGGCGCTGAAGGAGGCGGTGAAGT
TTATCAAGGAGAAGCTTGTGGTGCCAGTGGACCAGCTGCAACAAGATAAC
CTGCTCAATGCCGCCCGCACCTCCATGAGCAGCAAAATCCTGGGGCCCGA
ATCCGACTTTTTTGCTCAATTGGCTGTCGATGCTGTTCAGTCCGTGAAGA
CCGAAAGTACCCACAGCGAGACAGGGAAAATAGGCGTCAAATACCCTGTT
TCGGCCATCCACATTCTTAAATGCCATGGCCAGTCCTCGCTCTCCTCCCA
CCTCGTCGATGGCTTTGCGATTGCCGGGGGCCGTGCGGCCCAGGGGATGC
CCACGTCTGTAACGCCCGCGAAAATTGCCTTGCTTGACTTCAGCTTACAA
CGGCACAAGATGCAGCTGGGGGTGAGTGTGGTGGTCAAGGACGTGAAGGA
GGTCGAGTTGATCCGGCAGAGGGAAATGGATATTACAAAGGAGCGGATCC
AGAAGATCTTGGAGGCGGGTGCAAACGTCGTGCTGACGACGAAGGGAATC
GACGACCTGGCCATGAAGTATTTTGTGGAGGCCGGGGCCATGGCGGTGCG
GAGGGTGAAGAAAGAAGACTTGAAACGAATTGCCAAGGCAACGGGGGGGC
AGGTGGTGGGCACCTTAGCGGATATGGAGGGGAATGAAGCGTTTGATCCG
GGTATGCTGGGGGTGGCGGATATGGTGGAGGAACGAAGGGTGGGGGATGG
GGAGATGCTTTACATCAGGTTGAAGGAGGGAGGGAAAGGGGTGGGGAGGG
CGGCGACAATCGTGTTGCGGGGAGCGAATGATTACATGCTCGATGAAATG
GACAGGGCGTTGCACGATAGCCTGATGGTGGTCAAACGGATGCTTGAGAG
CAATTCCTTGGTCGCGGGGGGCGGGGCCGTGGAGGCAGCCTTGTCCATCC
ACTTGGAGGAATATGCCATGACGTTGGGAAGCAAAGAGCAATTAGCCATT
GCCGCATTTTCGGAGGCCTTGCTGGTCATCCCTCGGACTCTGGCTGTGAA
CGCGGCGCAGGATGCCACCGAACTAGTTGCCAACCTGCGGGCGGCCCATT
TCAAGGCCCAGCAGCAGGAGTCGACGTCGACTGGACAGCAGGCCCCTGGG
GGCATGGAACCGATGGGAGGGGGGGCGGCGTTGGGAGAGGAAGGGGATGG
GGGAGGGAAGGCGAAGAAGAATGGACAGAAGGATGATTTGTGGTATGCAG
GCTTGGATTTATTTGAGGGTGTGGTGAGGAATAATCTTGCGGCGGGGGTC
GTGGAGCCGGCGATCAGTAAGATTAAGAGTTTGAGGTTTGCCACGGAGGC
GGCGATTACGATTTTGAGGATTGATGACTTGATCAAGCTGACAGAAAGGA
GCCCAGGGCCGCCGGGGGGGATGCAGGGGATGCAGTAA

Synonyms

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