NO13G00780.1, NO13G00780.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO13G00780.1
Unique NameNO13G00780.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length714
Alignment locationchr13:256582..259300 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:256582..259300 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G00780.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G00780NO13G00780Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO13G00780.1NO13G00780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO13G00780.1.cds1NO13G00780.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G00780.1.cds2NO13G00780.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G00780.1.cds3NO13G00780.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G00780.1.cds4NO13G00780.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G00780.1.cds5NO13G00780.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G00780.1.cds6NO13G00780.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G00780.1.cds7NO13G00780.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO13G00780.1 ID=NO13G00780.1|Name=NO13G00780.1|organism=Nannochloropsis oceanica|type=mRNA|length=714bp
ATGAAGGGCTGCGAGATGCTTGCGATTGCTTGCTCTCTCTGGTTCCTTTT
TGTGGACGATGACGCCCGGCACAACCAGCCGCACTACCTGGACCACAATC
TAAACAATGGCGTGCACGACCGCAATATAGCCTCTTTCATCACCGCCATC
TATGAAGGGAAACGCAGACAACCACCGATGATTGAGAGCGGTTCACAAGG
ACCAGCTACACGGGCAGCACTAACTATACGAGTACCAGCACAAGCAACAA
TAATAAAAGCAGCGGCAACAGCAACAGCCGCAACAGCGACAGAAGTTAAA
GTAGCTTGCAGCTTTTCTTTTTCAGCAAGTGACTTGAACGAGCTCCAACT
GACATCTTCATCTGGATGGAGGAGCTTCTCTTCTTCCACCTCCAACTCCG
CGCGTACATCCTCAGCCTTTCCCGACTGCGTCACGCACCGCATCATCATC
CATGACGACAACGGCCATAGCGAGAAGAGCTCTTCAGCGGACCCCAGCAC
TGCGGCAACGACAGCAAAAGCGGAGGGACAGCCTTGCACAAACAGTAACA
GTTTTACTGTAAACCTATCACTTCACCTCTTGGCCTTTCATCATCGCAAT
AACAGATCAAGGTACAGCCATTTGGGTCAGAAGGTGGGCGTTAGGTGGCG
GGGAAATGTTGGTAGCAGCCTGTGCACCGAAGGAGAGATGAAGCCAAGAA
AAATACATAAGTGA
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protein sequence of NO13G00780.1

>NO13G00780.1-protein ID=NO13G00780.1-protein|Name=NO13G00780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=238bp
MKGCEMLAIACSLWFLFVDDDARHNQPHYLDHNLNNGVHDRNIASFITAI
YEGKRRQPPMIESGSQGPATRAALTIRVPAQATIIKAAATATAATATEVK
VACSFSFSASDLNELQLTSSSGWRSFSSSTSNSARTSSAFPDCVTHRIII
HDDNGHSEKSSSADPSTAATTAKAEGQPCTNSNSFTVNLSLHLLAFHHRN
NRSRYSHLGQKVGVRWRGNVGSSLCTEGEMKPRKIHK*
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mRNA from alignment at chr13:256582..259300-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO13G00780.1 ID=NO13G00780.1|Name=NO13G00780.1|organism=Nannochloropsis oceanica|type=mRNA|length=2719bp|location=Sequence derived from alignment at chr13:256582..259300- (Nannochloropsis oceanica)
ATGAAGGGCTGCGAGATGCTTGCGATTGCTTGCTCTCTCTGGTTCCTTTT TGTGGACGATGACGCCCGGCACAACCAGCCGCACTACCTGGACCACAATC TAAACAATGGCGTGCACGAGTACGAGATCGGCCTGCATGCGTAGAAAGCT GTGGCGTGGCCGGGGCGGTGGGAATGCGAGAAGTGCTTGTGGTATCTTTG AACGGGATGCGCCCCCGCCTATCCTCTACTGCGTCTCAAGACCAATGTCG CGCATAGCAAGAAGCCCAAAACCATCACCACCACAACGAGTAGCCGCAAT ATAGCCTCTTTCATCACCGCCATCTATGAAGGGAAACGCAGGTAAGGGTC AGTATTCATTCTTTCGATCGCCTGACTTTCCCTTGTGTCCTGCCCGTACT GTCGTTTGCCTCAGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG TTGTTTTGGTAATGATTAGAATAGATTCTTTCCCCGTAAGATCGACCATG GTTCGAAACTGAAAGAGCCCTGCTCTCTCTCAAGCCAGAGATGCGGGGTT AAAATGAAAACAAAACGTACACACCACAACACACATACATACAGCCTAAA TGGGTGCACGAATGAATAAATGAGTTTAGTTAGAACCATTTTTCCTTATG TCATTCATTCTGTATACACACACTTTCATCCCTTTCTCCTCCTGTCCAGA CAACCACCGATGATTGAGAGCGGTTCACAAGGACCAGCTACACGGGCAGC ACTAACTATACGAGTACCAGCACAAGCAACAATAATAAAAGCAGCGGCAA CAGCAACAGCCGCAACAGCGACAGAAGTTAAAGTAGCTTGCAGCTTTTCT TTTTCAGCAAGTGACTTGAACGGTATGTATCGTTATTCCAATATACTTGC ATTTCCATCTGCGTTCGTAAAACCACCCACGCCTGTGTGTGTGTGTAAAT ATGATGACCTGAACTATTTCCTTAGGACACCAACCTAGTCTCTAATCTCT ACGGAGAACGCCCAGAGACGATGCGTACAACATTAGTTTTTCACAGTTTG CCTGAAACACACATGCACACACGACCGCACGCTTGCTCTTGTCTCTTGGA TGGTTCTGTTCTCTTTCTCCGTCTCATCTCTCTCATCCCCCTCAATCTTC ACAGTTTATCGTAAACTATTTAATGACTGTCTGACCCTTTTCTTGCGCAA TTTATAACAATACAGAGCTCCAACTGACATCTTCATCTGGATGGAGGAGC TTCTCTTCTTCCACCTCCAACTCCGCGCGTACATCCTCAGCCTTTCCCGA CTGCGTCACGCACCGCATCATCATGTAAGGCTCGCCGCCATATGGGTGCG AAATTGAAAAATGATGATACTTTCAACCATATATGTAAAGAAGAAACGAA AATCAAATGATTAAGAAACTTTAAGATGACGAGTCCGACGGCCGCCTCTG TTGTCGTTGGCTTCTTCCTCCCTTGTCCTCTGGAGGGCGCAACGCGGGCA CGGTACTTGACGCGTTCTGCATCTAGTGCTTGTGTTCGTGCGCTTTCAAT TTTAAGGAGGCTTGGGGGGGCTAGCGCGTGGCTGCTTGGGGAATAATCGA GGCATTTGTATGATGGTTTTTTCTTCGAAACTTACTTAATCTGTCTCTTT CTTGCTCTGTGTTTGTCCAGCTAACGCTCTTCTTCTCTCACTTCTCATTC AGTAAAACACAGAACTTTGAATGCATGGTAAAAAAAGCGATATTGGAGCA GAAGAGCGCACTACGACGGCCTTAGCCATGACGACAACGGCCATAGCGAG AAGGTACGCGAAGAGTAAAAGAGAATGCTTTAATACCTTAATGTTTCCTC CTCTTTATTTTCTTACTTTTCTCGGGTAATGTCTATCTTATGCAGGTATG TCTCGATGTTGTTTGCTGTACAGGCCCTATGACGAACACATGGATTCACT TTATGTGCGTCTGATTCCAAGTGAATGAACAATAAACATGTTGCCTTCCT ACTGAGAGCCTCAGCCCCAACACCATCAAAAGCAGCGCGTATGGCGACCA TTTGCCTGCATTTTCGATCCGTTTCTCTCGTGTGCATCAAACGACCTTCA TTTTGATGACTCTTTTCTTCTATCATCCTCCCCTTCTTACAGAGCTCTTC AGCGGACCCCAGCACTGCGGCAACGACAGCAAAAGCGGAGGGACAGCCTT GCACAAACAGTAACAGTTTTACTGTAAACCTATCACTTCACCTCTTGGCC TTTCATCATCGCAATAACAGGTAAGACATTGTATCCGCTTCGAAGAAAGG AGGGAGTGAGGGAGAAAGGGCTGAAAAAGAGGAAGGCCTGATGATGAAGA CCAATGCACAATGGGAATCTCTCTGACTGCATTTCCTTATAAAGGAGTGT AGATCTTTGATGAGAACCGCTGTCATCCTTGAACTTAAGGCTAGCTTATA TCCATTCACTCTTCTTTTTTGTCATCGGGCGGAGGGAGGGACGGAGGGAC GCGGGGACTAAGGAGGTGTAATGATTATTTAGGTATCAGTACGATTGCAA ACAATTTAAAAATGGAGGGAAACTCAGCATTTTTACCCCTTCCTTACCAC CTCACGACAGATCAAGGTACAGCCATTTGGGTCAGAAGGTGGGCGTTAGG TGGCGGGGAAATGTTGGTAGCAGCCTGTGCACCGAAGGAGAGATGAAGCC AAGAAAAATACATAAGTGA
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Coding sequence (CDS) from alignment at chr13:256582..259300-

>NO13G00780.1 ID=NO13G00780.1|Name=NO13G00780.1|organism=Nannochloropsis oceanica|type=CDS|length=714bp|location=Sequence derived from alignment at chr13:256582..259300- (Nannochloropsis oceanica)
ATGAAGGGCTGCGAGATGCTTGCGATTGCTTGCTCTCTCTGGTTCCTTTT
TGTGGACGATGACGCCCGGCACAACCAGCCGCACTACCTGGACCACAATC
TAAACAATGGCGTGCACGACCGCAATATAGCCTCTTTCATCACCGCCATC
TATGAAGGGAAACGCAGACAACCACCGATGATTGAGAGCGGTTCACAAGG
ACCAGCTACACGGGCAGCACTAACTATACGAGTACCAGCACAAGCAACAA
TAATAAAAGCAGCGGCAACAGCAACAGCCGCAACAGCGACAGAAGTTAAA
GTAGCTTGCAGCTTTTCTTTTTCAGCAAGTGACTTGAACGAGCTCCAACT
GACATCTTCATCTGGATGGAGGAGCTTCTCTTCTTCCACCTCCAACTCCG
CGCGTACATCCTCAGCCTTTCCCGACTGCGTCACGCACCGCATCATCATC
CATGACGACAACGGCCATAGCGAGAAGAGCTCTTCAGCGGACCCCAGCAC
TGCGGCAACGACAGCAAAAGCGGAGGGACAGCCTTGCACAAACAGTAACA
GTTTTACTGTAAACCTATCACTTCACCTCTTGGCCTTTCATCATCGCAAT
AACAGATCAAGGTACAGCCATTTGGGTCAGAAGGTGGGCGTTAGGTGGCG
GGGAAATGTTGGTAGCAGCCTGTGCACCGAAGGAGAGATGAAGCCAAGAA
AAATACATAAGTGA
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Synonyms
Publications