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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr13 | genome | chr13:187853..189262 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO13G00540.1 ID=NO13G00540.1|Name=NO13G00540.1|organism=Nannochloropsis oceanica|type=mRNA|length=1410bp AACAACAGGCAGGACAGCATGAACAGCAGTAGCAATGGCAGTACTGTTAA GGAGCGCCCAAGAGCGGGGGGCTGGAGCGAGGCGGAGCTTCTATCCATGG CTTTCAGGAAAAAACAGAGGGAGGAGGCGGAGGAGGCAGCACAGCAACTG GAGCGCAGGTGTACAAGCAAGAACACTAAAAAGAACAAGAAGAAGAAGAC GAGGAAGCGTCGGCACTCTTTCTCCTCTTTCTCCTCCTCCTCCATGTCAC GCTCTCGCTCTCCACTGCCCACCCGTCATCGTGTTGCCTCCCCTCCACCC CCAGACCCCTACTCATCCCTCCTCCGTCAGGGAGGCTCGTTTGCCCGCCA TCACCGAGACCGTCCTTACCTTCCTCCGCCCACCTCGACACGTGATTGTG GCTATCACTGTAAAAGTAGGGAAGAAGACGACCGCAGAGGCCGAAGCAGG AGCAGGAGCAGGAGAAGGAGGAGTACCAGTTGGAATCGGAGGAGGAAGCA GCGGAGCAGAAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCA TCCGGAGCAGCAGTGACGGTAGACGTAAGCACAAGATAGACACCGAGAAA TCCGCCTCCGGCTCCCGTGAACGAAACCGTGGCACCGATGACGACGACAG CCACGGTTCAAGGAAAGGGCGGCGGCATCAGCGGAAGCATAGCAGTCAGG TGAGCATGACTAGCTCTCTCTCTACCCACCAAAGCGACGCTGCTTGGCCT TTGGGTGAGGTTGATGAATTTGGCCGCACCACCACCTTGCACAAACGTAC GGTGGCCAGGCCTACCCGCAGCAGTAGCAGCAGCGCGGACAGAGGAGAGG GAGAGAGCTCGAAATGCCGTCGTTATCGCAGCAACGGGAAGAGGACGATG GCGCGAAACCGTGAGCATTCCTGGTCTCAGTCTCGCTCCCGTTCACGTTC CTGTGCCAAGAATCGCAGTCGGAGTCGGAGCCGGAGTTGTGGTAGCCAGA AGAGGAGAAGTAGGGAGAGGAGCAGGAGTAGGGAGAGGGCATGGAGTCCA GGCCCTGACAATCTAAGGCAGTGGAACCGCGATAAATTTGCAGAGGTGGT GCGGGAGGAAGAGGAGGAAGGTAGGGAGACGGGGGGGAAGGAAGGCCGGA GTCCGTATAGGAGAGTGTCGAGAGACTACGTCCCGCCATTGCCGACGTGG AAGAGCAAAGCCGGGGGGGTGTATATTCCAATAGTGCGGAAGTAAGTGAG TTCGTGCAAGGGACCTTGAAATCCCTAGGACCTTTCCATCTTTCGATGAC ATGACCACCAAGAGAAACTCTTGGGGCTTTGTCGTGTCAGCCAGCCCCCT ATTTAAAATGAAAGCCTTAGGATCGCCCATAGGGTAAAGCACGAATCACA ATTATAGGAA back to topprotein sequence of NO13G00540.1 >NO13G00540.1-protein ID=NO13G00540.1-protein|Name=NO13G00540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=409bp MNSSSNGSTVKERPRAGGWSEAELLSMAFRKKQREEAEEAAQQLERRCTS KNTKKNKKKKTRKRRHSFSSFSSSSMSRSRSPLPTRHRVASPPPPDPYSS LLRQGGSFARHHRDRPYLPPPTSTRDCGYHCKSREEDDRRGRSRSRSRRR RSTSWNRRRKQRSRSRSRSRSRSRSRSIRSSSDGRRKHKIDTEKSASGSR ERNRGTDDDDSHGSRKGRRHQRKHSSQVSMTSSLSTHQSDAAWPLGEVDE FGRTTTLHKRTVARPTRSSSSSADRGEGESSKCRRYRSNGKRTMARNREH SWSQSRSRSRSCAKNRSRSRSRSCGSQKRRSRERSRSRERAWSPGPDNLR QWNRDKFAEVVREEEEEGRETGGKEGRSPYRRVSRDYVPPLPTWKSKAGG VYIPIVRK* back to topmRNA from alignment at chr13:187853..189262- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO13G00540.1 ID=NO13G00540.1|Name=NO13G00540.1|organism=Nannochloropsis oceanica|type=mRNA|length=1410bp|location=Sequence derived from alignment at chr13:187853..189262- (Nannochloropsis oceanica) AACAACAGGCAGGACAGCATGAACAGCAGTAGCAATGGCAGTACTGTTAA
GGAGCGCCCAAGAGCGGGGGGCTGGAGCGAGGCGGAGCTTCTATCCATGG
CTTTCAGGAAAAAACAGAGGGAGGAGGCGGAGGAGGCAGCACAGCAACTG
GAGCGCAGGTGTACAAGCAAGAACACTAAAAAGAACAAGAAGAAGAAGAC
GAGGAAGCGTCGGCACTCTTTCTCCTCTTTCTCCTCCTCCTCCATGTCAC
GCTCTCGCTCTCCACTGCCCACCCGTCATCGTGTTGCCTCCCCTCCACCC
CCAGACCCCTACTCATCCCTCCTCCGTCAGGGAGGCTCGTTTGCCCGCCA
TCACCGAGACCGTCCTTACCTTCCTCCGCCCACCTCGACACGTGATTGTG
GCTATCACTGTAAAAGTAGGGAAGAAGACGACCGCAGAGGCCGAAGCAGG
AGCAGGAGCAGGAGAAGGAGGAGTACCAGTTGGAATCGGAGGAGGAAGCA
GCGGAGCAGAAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCA
TCCGGAGCAGCAGTGACGGTAGACGTAAGCACAAGATAGACACCGAGAAA
TCCGCCTCCGGCTCCCGTGAACGAAACCGTGGCACCGATGACGACGACAG
CCACGGTTCAAGGAAAGGGCGGCGGCATCAGCGGAAGCATAGCAGTCAGG
TGAGCATGACTAGCTCTCTCTCTACCCACCAAAGCGACGCTGCTTGGCCT
TTGGGTGAGGTTGATGAATTTGGCCGCACCACCACCTTGCACAAACGTAC
GGTGGCCAGGCCTACCCGCAGCAGTAGCAGCAGCGCGGACAGAGGAGAGG
GAGAGAGCTCGAAATGCCGTCGTTATCGCAGCAACGGGAAGAGGACGATG
GCGCGAAACCGTGAGCATTCCTGGTCTCAGTCTCGCTCCCGTTCACGTTC
CTGTGCCAAGAATCGCAGTCGGAGTCGGAGCCGGAGTTGTGGTAGCCAGA
AGAGGAGAAGTAGGGAGAGGAGCAGGAGTAGGGAGAGGGCATGGAGTCCA
GGCCCTGACAATCTAAGGCAGTGGAACCGCGATAAATTTGCAGAGGTGGT
GCGGGAGGAAGAGGAGGAAGGTAGGGAGACGGGGGGGAAGGAAGGCCGGA
GTCCGTATAGGAGAGTGTCGAGAGACTACGTCCCGCCATTGCCGACGTGG
AAGAGCAAAGCCGGGGGGGTGTATATTCCAATAGTGCGGAAGTAAGTGAG
TTCGTGCAAGGGACCTTGAAATCCCTAGGACCTTTCCATCTTTCGATGAC
ATGACCACCAAGAGAAACTCTTGGGGCTTTGTCGTGTCAGCCAGCCCCCT
ATTTAAAATGAAAGCCTTAGGATCGCCCATAGGGTAAAGCACGAATCACA
ATTATAGGAA back to topCoding sequence (CDS) from alignment at chr13:187853..189262- >NO13G00540.1 ID=NO13G00540.1|Name=NO13G00540.1|organism=Nannochloropsis oceanica|type=CDS|length=1227bp|location=Sequence derived from alignment at chr13:187853..189262- (Nannochloropsis oceanica) ATGAACAGCAGTAGCAATGGCAGTACTGTTAAGGAGCGCCCAAGAGCGGG GGGCTGGAGCGAGGCGGAGCTTCTATCCATGGCTTTCAGGAAAAAACAGA GGGAGGAGGCGGAGGAGGCAGCACAGCAACTGGAGCGCAGGTGTACAAGC AAGAACACTAAAAAGAACAAGAAGAAGAAGACGAGGAAGCGTCGGCACTC TTTCTCCTCTTTCTCCTCCTCCTCCATGTCACGCTCTCGCTCTCCACTGC CCACCCGTCATCGTGTTGCCTCCCCTCCACCCCCAGACCCCTACTCATCC CTCCTCCGTCAGGGAGGCTCGTTTGCCCGCCATCACCGAGACCGTCCTTA CCTTCCTCCGCCCACCTCGACACGTGATTGTGGCTATCACTGTAAAAGTA GGGAAGAAGACGACCGCAGAGGCCGAAGCAGGAGCAGGAGCAGGAGAAGG AGGAGTACCAGTTGGAATCGGAGGAGGAAGCAGCGGAGCAGAAGCAGGAG CAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCATCCGGAGCAGCAGTGACG GTAGACGTAAGCACAAGATAGACACCGAGAAATCCGCCTCCGGCTCCCGT GAACGAAACCGTGGCACCGATGACGACGACAGCCACGGTTCAAGGAAAGG GCGGCGGCATCAGCGGAAGCATAGCAGTCAGGTGAGCATGACTAGCTCTC TCTCTACCCACCAAAGCGACGCTGCTTGGCCTTTGGGTGAGGTTGATGAA TTTGGCCGCACCACCACCTTGCACAAACGTACGGTGGCCAGGCCTACCCG CAGCAGTAGCAGCAGCGCGGACAGAGGAGAGGGAGAGAGCTCGAAATGCC GTCGTTATCGCAGCAACGGGAAGAGGACGATGGCGCGAAACCGTGAGCAT TCCTGGTCTCAGTCTCGCTCCCGTTCACGTTCCTGTGCCAAGAATCGCAG TCGGAGTCGGAGCCGGAGTTGTGGTAGCCAGAAGAGGAGAAGTAGGGAGA GGAGCAGGAGTAGGGAGAGGGCATGGAGTCCAGGCCCTGACAATCTAAGG CAGTGGAACCGCGATAAATTTGCAGAGGTGGTGCGGGAGGAAGAGGAGGA AGGTAGGGAGACGGGGGGGAAGGAAGGCCGGAGTCCGTATAGGAGAGTGT CGAGAGACTACGTCCCGCCATTGCCGACGTGGAAGAGCAAAGCCGGGGGG GTGTATATTCCAATAGTGCGGAAGTAA back to top
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