NO13G00100.2, NO13G00100.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO13G00100.2
Unique Name	NO13G00100.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4583
Alignment location	chr13:29529..35986 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr13	genome	chr13:29529..35986 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO13G00100.2 vs.
Match: EWM22854.1 (sporangia induced mitogen-activated protein [Nannochloropsis gaditana])

HSP 1 Score: 806.6 bits (2082), Expect = 4.100e-230
Identity = 395/454 (87.00%), Postives = 418/454 (92.07%), Query Frame = 0

Query:    1 MEGYLQKQGYVFSSRRYFILTGTALLCYASRGDQSEVRETFALTSDTQVVEMKTKEKLKFRLKNEGFSWTLAADDDNEEEGRKWVEAIARAVAHLASFSADGYRGGEGESTAGHTHTPARKVVVIEGTEFVIDPRYEVTRRLGNGAYGVVVAAKDTITNTPVAIKKCFNIFQSLSDAKKIAREVRLLRQMDHPNITRIITVIPPLTPAFDEVYIVSELMDIDMHNLMYLSREKITPDHVQFFVYQVLCGIKYMHALNIIHRDLKPSNLLINANCDLKICDFGLARGIHLDSPAQDKECDLTAADAAAPEKPKDLLSEYVVTRWYRAPEILLNPRNYSKPVDIWAVGTIFGELLARKPMFPAHNYDHLIRLQTRTLGSPSEENLKWVTREKARTFMRSLPQYPRRDFKSLYPEASAPALDLLEKLLQWDPAKRPSAAEALSHPYFDDIRDADFEQ 455
            MEGYLQKQG+VFSSRRYF+LT T LLCYA++ D+SEVR++F L  DTQVVE+K K+KLK RLK+EG +WTL+AD+D+E EGR+W +A+A AVA LAS S     GG GE T    H PARKVVVIEGTEFVIDPRYEVTRRLGNGAYGVVVAAKDT+T   VAIKKCFNIFQSLSDAKKIAREVRLLRQMDHPNITRI TVIPPL+  FDEVYIVSELMDIDMHNLMYLSREKITPDHVQFF+YQVLCGIKYMHALNIIHRDLKPSNLLINANCDLKICDFGLARGI  + PAQDKECDLTAADAAAPEKPKDLLSEYVVTRWYRAPEILLNPRNYSKPVDIWAVGTIFGELLARKPMFPAHNYDHLIRLQTRTLGSPSEENLKWVTREKARTFMRSLPQYPRRDFKSLYPEAS PALDLLEK+LQWDPAKRP+AAEALSHPYFDDIRDADFEQ
Sbjct:    1 MEGYLQKQGFVFSSRRYFVLTNTGLLCYANKEDRSEVRDSFPLAPDTQVVEIKIKDKLKLRLKSEGLTWTLSADEDDEAEGRRWADALATAVARLASLSKGHPPGGHGEGTRELAHNPARKVVVIEGTEFVIDPRYEVTRRLGNGAYGVVVAAKDTVTGKAVAIKKCFNIFQSLSDAKKIAREVRLLRQMDHPNITRITTVIPPLSATFDEVYIVSELMDIDMHNLMYLSREKITPDHVQFFIYQVLCGIKYMHALNIIHRDLKPSNLLINANCDLKICDFGLARGIQSNGPAQDKECDLTAADAAAPEKPKDLLSEYVVTRWYRAPEILLNPRNYSKPVDIWAVGTIFGELLARKPMFPAHNYDHLIRLQTRTLGSPSEENLKWVTREKARTFMRSLPQYPRRDFKSLYPEASGPALDLLEKILQWDPAKRPTAAEALSHPYFDDIRDADFEQ 454

The following BLAST results are available for this feature:

BLAST of NO13G00100.2 vs.

BLAST of NO13G00100.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22854.1	4.100e-230	87.00	sporangia induced mitogen-activated protein [Nanno...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO13G00100	NO13G00100	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO13G00100.2	NO13G00100.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO13G00100.2.cds1	NO13G00100.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G00100.2.cds2	NO13G00100.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G00100.2.cds3	NO13G00100.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G00100.2.cds4	NO13G00100.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G00100.2.cds5	NO13G00100.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G00100.2.cds6	NO13G00100.2.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G00100.2.cds7	NO13G00100.2.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G00100.2.cds8	NO13G00100.2.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G00100.2.cds9	NO13G00100.2.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G00100.2.cds10	NO13G00100.2.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G00100.2.cds11	NO13G00100.2.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr13:29529..35986+
coding sequence from alignment at chr13:29529..35986+

mRNA sequence

>NO13G00100.2 ID=NO13G00100.2|Name=NO13G00100.2|organism=Nannochloropsis oceanica|type=mRNA|length=4583bp
CTTGATTCATGTTCATGATTTTGGTGTGTATTTGATGATGTTCTTTTTCA
TCGCCATTACCCGCTTGGAGGATATGAGTACTGTACTAGCGGAGTGTGAG
CGGTCTTACAAAGAGACATCTTGTGTAAATATAGCAGCACCTCTGCAGCT
ATCGCCGTTCTAGGATCATTCTCATTGCACATGGTTTCCCAATTTGAAGC
ATTTCGTTGAGCCTTAACGGAGGCAAAGCTAGCATCCATGTTTGTCTGGC
TTTTACTTGTGCAGCGTCCTTTGCGCACACACGGTAAAGTAATCATGGTG
ATCCATTTAGCATCAATGGGAGGATGGATCCTGCCAGCGATATGGTCTTA
GGAATCGGAGTGGAAGGTGGAGGAATAATGGAAGTGGGTGCCCCAAAAAG
TTAAGATGTACTCCTAGTCATTGGTATAGACAGCCGGTCGGAGTCACTAT
GGGTCGCAAGACTGAAGAGCGAAGCGGGCTGTGTGATGGAGGACGAAGAG
ATAAGAACCGAAAGCCTCAATGCAAAGCAAGTTCTAGGCCAAAGAGAACT
GGAATGTATGGAGGAATCAAAACAGAGTAGATCAATATTATGGCCTCCAA
AGAGCTCAGCGTGGTCAATACTAACTGATTCATTACATGGTTTGATCCAT
CACACATCGACGTGACCACATTTGGTTCGGATGAAGTACCGATAGATCTT
GGGAGTGTAACAGAAGCCCGGCCTTGCCGCCGCTTGCTGACCATTATCGA
CAGCTCTTAGTGGAGGAAGGAGACAAAATGTACAACAGATATTCAGGGCA
TCAATTTGGGAAGATAAGAGGGGTGAAGGTAAGGCTTTTTCAGAAATGTG
GATCATGGTTTTCCATTTGGATTTGCTATCGCCTTATAGGAATGGCACAT
GCTGCACTTTTTTGTCGACATCCACTCAAATATTATGTGATCATGCTTCG
TAGGATGGGAAGAGCACGTCCGATGCTACCCGTTCTTGAGCTTGCTTTGC
GCGCATAGAGCTACAGCAGAACGGGGCGGCAGTGCCTTTCTCTCTTGGTT
TTCAAAGGGGCTTGAAAGGGGTGGGGGCAACTATAGATTTTCGGTCTAGC
ATGGTTCTTTTTACTCTTATTCAATCTGCTTCCGCGGAGCTTCCTTCTCC
ATGGCTATGTGCTTGGGTTGGTCAAACACGGAAGGCGCGCCCACACGTCG
TCCATAGTCACGGAGGCCGTGAGTGCTTTGGGGATGCACTTAGTTAGGGG
GAAAGAAGGCGCTAGTATAGGTGCGGGGGGAACAACAAAAATGAAAGTTA
CTGTTATTTGCATATGGAAAAGTATCGTGCACACGATGGCAGGGATGGTG
CTTGAGGTGCCGCGCGGCGCGAATGATTAGCAACCCATTATTACATCTAA
CCTCGACTCCCATTCCACAATGTACCACATAGCGGTAGCAATTCTCTGGT
AGTAGATTGTGTGCTTAAAGTCTCCCAAGGCTTGCATATCGCAGTGTCTA
GCAGATCCTTTCGCTACATTCTTAGGTGCTTGTCGGGCCATGTTCAAAGA
GATTTCGACCGTTTGGGCATGGCAAAGTGCATGCGTCACCCACTTGAGGC
TTCTCGGCCTCCCTGCTCTCCCTCCCGAAGACGCCTTGCCCAGCATGTCT
GAGGGGTTTGCCAATCCCAAGCAGCGACTTCCTTTTTGTGGTACTTGACG
GTCGATCACCTTCTTTCTCTCATCATTGCGGAAGGAAAGCCGGAATTGGA
CGTACCAAGTCTTGTACAGGTAACCAGCAAAAAACATGGCATTCGCGAGG
GACGCCATACATGCATCCTCTCACTTCACCTCCCTTACGCAACCCAGGAT
CCTCTTTACGCATTCATTTCTTCCGCATCTATAGCATCTAATTGATTACC
TCGACAACCAAGGGTGTATTGTGCTAACTGGCTGAGGAAGTTGAGACCGA
GACTTCCTCACACAGACACTCATGGTTCATCCCCGTCCTTCTCACTCAGA
CACGGACTGCCCCCCTCCATCCCCTTCCACAGAGAGCATCGACGCTTTTA
CCTTTAGCTACGTCCTCTGAGAGAGATTCTTCTTTCCTCATCAGGCATTG
CTCTATTTAATTGCCTATTGGCCCCACCCAGTGCCTGCCACCACAACGCC
GAAGCAAGGAAAGTATGGAAGGTTACTTACAAAAGCAAGGATATGTCTTC
TCTTCTCGCCGGTACTTCATCCTGACCGGCACGGCACTATTGTGCTACGC
GTCGAGGGGCGACCAGAGTGAGGTGCGAGAGACGTTCGCTCTCACCTCCG
ACACGCAAGTGGTGGAGATGAAGACGAAAGAGAAGCTCAAGTTCCGTCTC
AAGAATGAAGGATTCTCCTGGACCCTGGCGGCCGACGATGATAATGAGGA
GGAAGGTCGAAAGTGGGTGGAAGCCATAGCAAGAGCTGTAGCTCACTTGG
CCTCCTTCTCGGCCGACGGCTACAGGGGAGGAGAGGGGGAATCCACGGCC
GGACATACACATACACCGGCACGGAAGGTGGTTGTGATTGAGGGCACTGA
GTTCGTGATCGACCCTCGGTATGAGGTGACCCGCCGACTAGGAAATGGGG
CGTATGGCGTGGTGGTGGCTGCCAAGGACACGATCACGAACACACCAGTG
GCCATCAAGAAGTGTTTCAATATATTCCAGTCCCTCTCGGATGCCAAGAA
GATCGCTCGGGAGGTCCGACTGCTGCGGCAGATGGACCATCCTAACATTA
CCCGGATCATCACGGTCATCCCGCCCCTGACGCCGGCCTTTGACGAGGTC
TACATCGTGTCGGAGCTGATGGACATTGACATGCACAATCTCATGTACCT
CTCCCGGGAGAAGATCACGCCCGACCACGTCCAATTTTTCGTCTACCAGG
TCCTTTGCGGCATCAAGTACATGCACGCCCTCAACATCATTCATCGTGAT
CTCAAGCCGTCCAACCTCCTGATCAACGCCAACTGCGACCTGAAGATATG
TGACTTTGGCCTAGCCCGCGGCATTCACTTGGATAGCCCCGCCCAGGACA
AGGAATGCGATCTTACGGCCGCAGATGCTGCTGCTCCGGAAAAGCCCAAG
GACTTACTGAGCGAGTACGTTGTCACCCGCTGGTACCGGGCACCTGAGAT
TCTCCTGAACCCGCGCAATTACTCCAAGCCGGTGGATATTTGGGCGGTGG
GCACCATCTTTGGCGAGCTCCTGGCGCGCAAGCCCATGTTTCCCGCGCAC
AACTACGACCACCTGATCCGCCTCCAGACCCGGACACTCGGGAGTCCGTC
GGAGGAGAACTTGAAATGGGTCACACGTGAGAAGGCGCGCACTTTCATGC
GCTCCTTGCCGCAGTACCCGCGTCGAGACTTCAAGAGTCTCTATCCAGAA
GCCTCTGCACCTGCTTTGGATTTGTTGGAGAAACTCTTGCAATGGGACCC
TGCCAAGCGCCCTAGTGCTGCTGAGGCTCTGTCGCATCCTTACTTCGATG
ACATCCGGGACGCGGACTTTGAGCAGGTATGGGCTGAGAAGAGGGGCTCA
GACGGAGGCCCAACACAAATTTAAAGGGAATGGAGGCTTTGAGCTTTAAA
CTCACGACTAATCAAAAACAAAACAGGAACCCAGCATCGTCATTGACTGG
GGAGACTTAGAAACGATGCGCACTACCAAGCCGAATCTTCAACGATACCT
AATCGAAGACATGGTGACGATGAACCCTGATTCAGCGGCTTTGTTGAAGA
CAGTTTCATTGGAGAGTGGCTTCGGGGGCGCAGCTGGGGCTACCTAAGCG
AAGAAAGGGGAAGTTAAAGTGAAACATGGGAAGAGGAGATGGTGCAAAGG
CGAAGGGGGGTGCCCTTTGATTTTCTGTTATGATACAGTCTGAAAAATTG
TTGGCTGATGCTCAGGATGGGGCTCAACGACTTGATAGCAAGCCTACGAG
CAAAACCAAATAAGTTGAATGCACCTATCTGTCTGACACTGTGCAGTAGA
TAGCCATGCTATGTGCGAAAAGGAGAGGTTTAGATTTCGGTGGGGTCAGT
CTGCACATGTGCGTAGTTGCACGTGTCATTTCATGTAAAAATATTAGGTT
GTCTGTTTGTCTGAGGGTCTGTTGATTCGATCTACACATGCGCTTGCTTT
CTATATGTGTGTCCTGCTATCGCGGTGTCTTACTCTGGTGCTCTGGCGAT
CTTTGACAAAGTATGCAGTGTGCGCTGCGCACGAGTAAGGGAAAGATCGA
GGCAAACATACAGGAAGAAATAAGAGGGAGAGGGACAAAATAATTGTGAA
ATAGGAATTATTAAATATATACCTGCCTGTTGCATAAAAGCGAGAAAGTG
TAGAACCCAAGGATTTCGAGAGGCAGTGTTAGAAGAGAAAGCAAAACATG
CGTATTTGTGTGTCTGTGTCGCGACGGACTGTCGCCTCATAGAATAGAAA
GAGATGAAAAGACGAAGAGAGATGAGAAACGGACGAAAACTTAGGGATCA
TTGCGGCGGCGGTGGTAGCAGCGAGAAGATAGAGAGACAAGAGAAGAGAA
GGGATAGAATAAATAACGATGAATATGATAGGA

protein sequence of NO13G00100.2

>NO13G00100.2-protein ID=NO13G00100.2-protein|Name=NO13G00100.2|organism=Nannochloropsis oceanica|type=polypeptide|length=470bp
MEGYLQKQGYVFSSRRYFILTGTALLCYASRGDQSEVRETFALTSDTQVV
EMKTKEKLKFRLKNEGFSWTLAADDDNEEEGRKWVEAIARAVAHLASFSA
DGYRGGEGESTAGHTHTPARKVVVIEGTEFVIDPRYEVTRRLGNGAYGVV
VAAKDTITNTPVAIKKCFNIFQSLSDAKKIAREVRLLRQMDHPNITRIIT
VIPPLTPAFDEVYIVSELMDIDMHNLMYLSREKITPDHVQFFVYQVLCGI
KYMHALNIIHRDLKPSNLLINANCDLKICDFGLARGIHLDSPAQDKECDL
TAADAAAPEKPKDLLSEYVVTRWYRAPEILLNPRNYSKPVDIWAVGTIFG
ELLARKPMFPAHNYDHLIRLQTRTLGSPSEENLKWVTREKARTFMRSLPQ
YPRRDFKSLYPEASAPALDLLEKLLQWDPAKRPSAAEALSHPYFDDIRDA
DFEQVWAEKRGSDGGPTQI*

mRNA from alignment at chr13:29529..35986+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO13G00100.2 ID=NO13G00100.2|Name=NO13G00100.2|organism=Nannochloropsis oceanica|type=mRNA|length=6458bp|location=Sequence derived from alignment at chr13:29529..35986+ (Nannochloropsis oceanica)
CTTGATTCATGTTCATGATTTTGGTGTGTATTTGATGATGTTCTTTTTCA
TCGCCATTACCCGCTTGGAGGATATGAGTACTGTACTAGCGGAGTGTGAG
CGGTCTTACAAAGAGACATCTTGTGTAAATATAGCAGCACCTCTGCAGCT
ATCGCCGTTCTAGGATCATTCTCATTGCACATGGTTTCCCAATTTGAAGC
ATTTCGTTGAGCCTTAACGGAGGCAAAGCTAGCATCCATGTTTGTCTGGC
TTTTACTTGTGCAGCGTCCTTTGCGCACACACGGTAAAGTAATCATGGTG
ATCCATTTAGCATCAATGGGAGGATGGATCCTGCCAGCGATATGGTCTTA
GGAATCGGAGTGGAAGGTGGAGGAATAATGGAAGTGGGTGCCCCAAAAAG
TTAAGATGTACTCCTAGTCATTGGTATAGACAGCCGGTCGGAGTCACTAT
GGGTCGCAAGACTGAAGAGCGAAGCGGGCTGTGTGATGGAGGACGAAGAG
ATAAGAACCGAAAGCCTCAATGCAAAGCAAGTTCTAGGCCAAAGAGAACT
GGAATGTATGGAGGAATCAAAACAGAGTAGATCAATATTATGGCCTCCAA
AGAGCTCAGCGTGGTCAATACTAACTGATTCATTACATGGTTTGATCCAT
CACACATCGACGTGACCACATTTGGTTCGGATGAAGTACCGATAGATCTT
GGGAGTGTAACAGAAGCCCGGCCTTGCCGCCGCTTGCTGACCATTATCGA
CAGCTCTTAGTGGAGGAAGGAGACAAAATGTACAACAGATATTCAGGGCA
TCAATTTGGGAAGATAAGAGGGGTGAAGGTAAGGCTTTTTCAGAAATGTG
GATCATGGTTTTCCATTTGGATTTGCTATCGCCTTATAGGAATGGCACAT
GCTGCACTTTTTTGTCGACATCCACTCAAATATTATGTGATCATGCTTCG
TAGGATGGGAAGAGCACGTCCGATGCTACCCGTTCTTGAGCTTGCTTTGC
GCGCATAGAGCTACAGCAGAACGGGGCGGCAGTGCCTTTCTCTCTTGGTT
TTCAAAGGGGCTTGAAAGGGGTGGGGGCAACTATAGATTTTCGGTCTAGC
ATGGTTCTTTTTACTCTTATTCAATCTGCTTCCGCGGAGCTTCCTTCTCC
ATGGCTATGTGCTTGGGTTGGTCAAACACGGAAGGCGCGCCCACACGTCG
TCCATAGTCACGGAGGCCGTGAGTGCTTTGGGGATGCACTTAGTTAGGGG
GAAAGAAGGCGCTAGTATAGGTGCGGGGGGAACAACAAAAATGAAAGTTA
CTGTTATTTGCATATGGAAAAGTATCGTGCACACGATGGCAGGGATGGTG
CTTGAGGTGCCGCGCGGCGCGAATGATTAGCAACCCATTATTACATCTAA
CCTCGACTCCCATTCCACAATGTACCACATAGCGGTAGCAATTCTCTGGT
AGTAGATTGTGTGCTTAAAGTCTCCCAAGGCTTGCATATCGCAGTGTCTA
GCAGATCCTTTCGCTACATTCTTAGGTGCTTGTCGGGCCATGTTCAAAGA
GATTTCGACCGTTTGGGCATGGCAAAGTGCATGCGTCACCCACTTGAGGC
TTCTCGGCCTCCCTGCTCTCCCTCCCGAAGACGCCTTGCCCAGCATGTCT
GAGGGGTTTGCCAATCCCAAGCAGCGACTTCCTTTTTGTGGTACTTGACG
GTCGATCACCTTCTTTCTCTCATCATTGCGGAAGGAAAGCCGGAATTGGA
CGTACCAAGTCTTGTACAGGTAACCAGCAAAAAACATGGCATTCGCGAGG
GACGCCATACATGCATCCTCTCACTTCACCTCCCTTACGCAACCCAGGAT
CCTCTTTACGCATTCATTTCTTCCGCATCTATAGCATCTAATTGATTACC
TCGACAACCAAGGGTGTATTGTGCTAACTGGCTGAGGAAGTTGAGACCGA
GACTTCCTCACACAGACACTCATGGTTCATCCCCGTCCTTCTCACTCAGA
CACGGACTGCCCCCCTCCATCCCCTTCCACAGAGAGCATCGACGCTTTTA
CCTTTAGCTACGTCCTCTGAGAGAGATTCTTCTTTCCTCATCAGGCATTG
CTCTATTTAATTGCCTATTGGCCCCACCCAGTGCCTGCCACCACAACGCC
GAAGCAAGGAAAGTATGGAAGGTTACTTACAAAAGCAAGGGTAAGTCATC
GTAACTCCCTTGTATTAATGTCGCTGTCATGTCGTCGTTTGTATTTTCTC
GAGGTCTAGACGGGCCCATCGACCCCACACTCTCGTCACTCAAGTTTGTT
CTTGCCCCTGGCCTACTCTGTGCCTTGCGTGCAGTAGGCTAAGCACCACT
CTCTCTCCTTTTCCCGAAATTCATAGGAGGTATATGCATTTCCATCCTTG
CATGTACCAAAAATCTCTTTACATCTGCTCTTATATATCGCCCCTACGAG
CGAACCTCCGCATGAGTAGCAGACAGTGTAATCTCCCGCCTGTGCCTGCA
TCTCGGTTTGACAACCGCCTTGACGCTGTACCAATCACCCCTTCCCTCAT
CTCTATCCTGCCTTCCATTTCCCCCTCTTCAGATATGTCTTCTCTTCTCG
CCGGTACTTCATCCTGACCGGCACGGCACTATTGTGCTACGCGTCGAGGG
GCGACCAGAGTGAGGTGCGAGAGACGTTCGCTCTCACCTCCGACACGCAA
GTGGTGGAGATGAAGACGAAAGGTAGGGACGGGAGGGAAAGAAGGAAGAG
GAGGGAGGGAAAAGAATTCCATCAGCAGGCACAGAGAGCAGCGAGGCTGA
TATACTTCACCCTTAGCATTACATACACGGACCCACATCCTGCTCTCCCT
CTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCATCCTCCTTGCAGAG
AAGCTCAAGTTCCGTCTCAAGAATGAAGGATTCTCCTGGACCCTGGCGGC
CGACGATGATAATGAGGAGGAAGGTCGAAAGTGGGTGGAAGCCATAGCAA
GAGCTGTAGCTCACTTGGCCTCCTTCTCGGCCGACGGCTACAGGGGAGGA
GAGGGGGAATCCACGGCCGGACATACACATACACCGGCACGGAAGGTGGT
TGTGATTGAGGTGGGTCATCGTCTGAGACAGGAAGGATGGAAAAGAACCG
TGACGGCACGCTTCCGCCCATTCCCCTCTCTTGTTGCTGCCCCTCTGCCG
GAAGCGCCGAGTCATTCATCTCCCTTCCTCCCTCCATACCCTTCCCTCCC
TCCATCCCTCCCTCCCTCACTCACCTCGAGCAGGGCACTGAGTTCGTGAT
CGACCCTCGGTATGAGGTGACCCGCCGACTAGGAAATGGGGCGTATGGCG
TGGTGGTGGCTGCCAAGGACACGATCACGAACACACCAGTAAGTTCAGAG
GGGGGGCGGGGGAAGGAGGGAGGGAAGGACAATTAGGCAGGCGATAATGT
ACCAGTCAGGTGGCGGGGCGTAGGGCATGACCAAGATTGCCAATCGTAAG
ATCATGAGTAGACCGGGAGGGTGGAACGGAGGGTCGGCATCGCCACTCGC
GTTTAGATCGTCACGTGCCTTGTCATAACCCGCCCTCCCTCCTTACCTTC
CTTCCTTTCTTCCATTCACCTTCCCCAAAGGTGGCCATCAAGAAGTGTTT
CAATATATTCCAGTCCCTCTCGGATGCCAAGAAGATCGCTCGGGAGGTCC
GACTGCTGCGGCAGATGGACCATCCTAACATTACCCGGATCATCACGGTA
GGGAGGGAGGGAGGGAGGGAGGGAGGGCCGGTGGATACAGATATGGTAAA
AGTTGGGCCCATTTTCCCTTTCTCACCATTCACACACATTGCCCCTCCCT
CGCTCCTCGCTTGCACCGTAGGTCATCCCGCCCCTGACGCCGGCCTTTGA
CGAGGTCTACATCGTGTCGGAGCTGATGGACATTGACATGCACAATCTCA
TGTACCTCTCCCGGGAGAAGATCACGCCCGACCACGTCCAATTTTTCGTC
TACCAGGTAAAGGCCATCTCTCCTCCTTCTCATTCTCCCTCCCTCCCTCC
CTCCCATCCTCCTTTTCTACTGCTTTTTCCGACGCCTTGGGTTCGCTCCG
AACCTCTCTTCTCTCCTCTCTTCCCTCCCTCGTCTATCCTGCAGGTCCTT
TGCGGCATCAAGTACATGCACGCCCTCAACATCATTCATCGTGATCTCAA
GGTATTAGCCACTCCTCTTTCCTTCCATTTCTATCCTTCCCTCCCTTCTT
CGCTCCCTCCCCTCCTCCCGCTCCCGATTTGACCGAGCTCCCTCCTCCCC
TCCCTTCCTCCCTCCCTCCCTCCTAGCCGTCCAACCTCCTGATCAACGCC
AACTGCGACCTGAAGATATGTGACTTTGGCCTAGCCCGCGGCATTCACTT
GGATAGCCCCGCCCAGGTTCGGCATGGAGGGAGGAATGCAGGGAATGAGG
AAAGAGTTGAGGGAAAAGTATGGGGGAAGCCACCACAAGACTATATATAT
ATAGTATTGAATTGAATTGAAACTGATGACCGAAACTTTGCACTTACAAC
AACATCGGGTTCATGCATGGCAGGTAGCCTCTAAACGGTCGCCTCTTTTT
CAACCACTTCAACTTCCTTTCCTCCTCCCTACTTACTAGGACAAGGAATG
CGATCTTACGGCCGCAGATGCTGCTGCTCCGGAAAAGCCCAAGGACTTAC
TGAGCGAGTACGTTGTCACCCGCTGGTACCGGGCACCTGAGATTCTCCTG
AACCCGCGCAATTACTCCAAGCCGGTGGATATTTGGGTACGATGCATGAG
GGAGGGATAGGAGGAAAAAGAAAGAGGGAGTGGGCTATATAAATTGCGCA
CCATTGGATGGTCGCGACCAGTCTAACTCAAAAGGCAACTTGCGGGCCTG
TTCTCCTCTTCTCCTCATTTCGACCCTCCATTAATCCTCTCTTTCTAAAA
CAGGCGGTGGGCACCATCTTTGGCGAGCTCCTGGCGCGCAAGCCCATGTT
TCCCGCGCACAACTACGACCACCTGATCCGCCTCCAGACCCGGACACTCG
GGAGTCCGTCGGAGGAGAACTTGAAATGGGTCACACGTGAGAAGGCGCGC
ACTTTCATGCGCTCCTTGCCGCAGTACCCGCGTCGAGACTTCAAGAGGTA
CGAGTTGTCAATTTAGTTATGGTAGTGCTTCCTCTCCTCTCTGTCCTCAC
TCTTTCTCGCACTTGAATCTTGTATTCAGACGCTCATGAATTTATTCCTC
ACACTAAAATAGTCTCTATCCAGAAGCCTCTGCACCTGCTTTGGATTTGT
TGGAGAAACTCTTGCAATGGGACCCTGCCAAGCGCCCTAGTGCTGCTGAG
GCTCTGTCGCATCCTTACTTCGATGACATCCGGGACGCGGACTTTGAGCA
GGTATGGGCTGAGAAGAGGGGCTCAGACGGAGGCCCAACACAAATTTAAA
GGGAATGGAGGCTTTGAGCTTTAAACTCACGACTAATCAAAAACAAAACA
GGAACCCAGCATCGTCATTGACTGGGGAGACTTAGAAACGATGCGCACTA
CCAAGCCGAATCTTCAACGATACCTAATCGAAGACATGGTGACGATGAAC
CCTGATTCAGCGGCTTTGTTGAAGACAGTTTCATTGGAGAGTGGCTTCGG
GGGCGCAGCTGGGGCTACCTAAGCGAAGAAAGGGGAAGTTAAAGTGAAAC
ATGGGAAGAGGAGATGGTGCAAAGGCGAAGGGGGGTGCCCTTTGATTTTC
TGTTATGATACAGTCTGAAAAATTGTTGGCTGATGCTCAGGATGGGGCTC
AACGACTTGATAGCAAGCCTACGAGCAAAACCAAATAAGTTGAATGCACC
TATCTGTCTGACACTGTGCAGTAGATAGCCATGCTATGTGCGAAAAGGAG
AGGTTTAGATTTCGGTGGGGTCAGTCTGCACATGTGCGTAGTTGCACGTG
TCATTTCATGTAAAAATATTAGGTTGTCTGTTTGTCTGAGGGTCTGTTGA
TTCGATCTACACATGCGCTTGCTTTCTATATGTGTGTCCTGCTATCGCGG
TGTCTTACTCTGGTGCTCTGGCGATCTTTGACAAAGTATGCAGTGTGCGC
TGCGCACGAGTAAGGGAAAGATCGAGGCAAACATACAGGAAGAAATAAGA
GGGAGAGGGACAAAATAATTGTGAAATAGGAATTATTAAATATATACCTG
CCTGTTGCATAAAAGCGAGAAAGTGTAGAACCCAAGGATTTCGAGAGGCA
GTGTTAGAAGAGAAAGCAAAACATGCGTATTTGTGTGTCTGTGTCGCGAC
GGACTGTCGCCTCATAGAATAGAAAGAGATGAAAAGACGAAGAGAGATGA
GAAACGGACGAAAACTTAGGGATCATTGCGGCGGCGGTGGTAGCAGCGAG
AAGATAGAGAGACAAGAGAAGAGAAGGGATAGAATAAATAACGATGAATA
TGATAGGA

Coding sequence (CDS) from alignment at chr13:29529..35986+

>NO13G00100.2 ID=NO13G00100.2|Name=NO13G00100.2|organism=Nannochloropsis oceanica|type=CDS|length=1410bp|location=Sequence derived from alignment at chr13:29529..35986+ (Nannochloropsis oceanica)
ATGGAAGGTTACTTACAAAAGCAAGGATATGTCTTCTCTTCTCGCCGGTA
CTTCATCCTGACCGGCACGGCACTATTGTGCTACGCGTCGAGGGGCGACC
AGAGTGAGGTGCGAGAGACGTTCGCTCTCACCTCCGACACGCAAGTGGTG
GAGATGAAGACGAAAGAGAAGCTCAAGTTCCGTCTCAAGAATGAAGGATT
CTCCTGGACCCTGGCGGCCGACGATGATAATGAGGAGGAAGGTCGAAAGT
GGGTGGAAGCCATAGCAAGAGCTGTAGCTCACTTGGCCTCCTTCTCGGCC
GACGGCTACAGGGGAGGAGAGGGGGAATCCACGGCCGGACATACACATAC
ACCGGCACGGAAGGTGGTTGTGATTGAGGGCACTGAGTTCGTGATCGACC
CTCGGTATGAGGTGACCCGCCGACTAGGAAATGGGGCGTATGGCGTGGTG
GTGGCTGCCAAGGACACGATCACGAACACACCAGTGGCCATCAAGAAGTG
TTTCAATATATTCCAGTCCCTCTCGGATGCCAAGAAGATCGCTCGGGAGG
TCCGACTGCTGCGGCAGATGGACCATCCTAACATTACCCGGATCATCACG
GTCATCCCGCCCCTGACGCCGGCCTTTGACGAGGTCTACATCGTGTCGGA
GCTGATGGACATTGACATGCACAATCTCATGTACCTCTCCCGGGAGAAGA
TCACGCCCGACCACGTCCAATTTTTCGTCTACCAGGTCCTTTGCGGCATC
AAGTACATGCACGCCCTCAACATCATTCATCGTGATCTCAAGCCGTCCAA
CCTCCTGATCAACGCCAACTGCGACCTGAAGATATGTGACTTTGGCCTAG
CCCGCGGCATTCACTTGGATAGCCCCGCCCAGGACAAGGAATGCGATCTT
ACGGCCGCAGATGCTGCTGCTCCGGAAAAGCCCAAGGACTTACTGAGCGA
GTACGTTGTCACCCGCTGGTACCGGGCACCTGAGATTCTCCTGAACCCGC
GCAATTACTCCAAGCCGGTGGATATTTGGGCGGTGGGCACCATCTTTGGC
GAGCTCCTGGCGCGCAAGCCCATGTTTCCCGCGCACAACTACGACCACCT
GATCCGCCTCCAGACCCGGACACTCGGGAGTCCGTCGGAGGAGAACTTGA
AATGGGTCACACGTGAGAAGGCGCGCACTTTCATGCGCTCCTTGCCGCAG
TACCCGCGTCGAGACTTCAAGAGTCTCTATCCAGAAGCCTCTGCACCTGC
TTTGGATTTGTTGGAGAAACTCTTGCAATGGGACCCTGCCAAGCGCCCTA
GTGCTGCTGAGGCTCTGTCGCATCCTTACTTCGATGACATCCGGGACGCG
GACTTTGAGCAGGTATGGGCTGAGAAGAGGGGCTCAGACGGAGGCCCAAC
ACAAATTTAA

Synonyms

Publications