NO12G03950.1, NO12G03950.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G03950.1
Unique Name	NO12G03950.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3413
Alignment location	chr12:1132757..1136169 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:1132757..1136169 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G03950.1 vs.
Match: EWM25640.1 (coatomer copii [Nannochloropsis gaditana])

HSP 1 Score: 1317.8 bits (3409), Expect = 0.000e+0
Identity = 695/890 (78.09%), Postives = 763/890 (85.73%), Query Frame = 0

Query:   29 MGLRPPQQQQQQQQPPPPPMMKPPSASPYPQQDTVGLPAGAGTGGGFPGHYRTPSLDTSIGGAPPGMGVPSMSSGSNMPGMENANQLPMLSEVDLSIASNPRFMRFTVSKIPNSQNNAAATKLPLGVVIQPMALDASGEDSIDVVNFGATGIVRCKKCRTYINPFVSWHDAGRRWRCNVCGTLNDVPSSYFHHVDQAGQRRDKHERPELSNGSVELVAPGEYMVRPPQPPVYVFVLDVSYGAVASGALGCTVEIIKRHLDALPGDPRTQFGLVTFDSTVHFYHFKPTLKMPQVLVIPDISELFLPLPEDLLVNLKESREVIDSLLEALPGMYEKTRDMEAALGPALTGAYRVMAPVGGKMCVVTATMPTLGDGRLKHREELRALGTEREHVMLNPEESWYRTKAVEFSRVQISVDLFVAAPAGQQSPYTDLASLAALPKFTGGNLFYYPGFSVEKGDGRKMGEEIGSLLTRPTGFEAVMRVRATRGLKVTQFYGNYYIRGTDLLALPNCSSESVFGVEMAHDEAFLTASVICVQAALLHTSSTGERRIRVHTVAAPVTAVLQEVIASVDVDTLCNLMAKRSLEVVLKTGLDAARHRLTQQCADLLRSCRAFCMPHQAQG--PGSYHQQQQQPAGLPPSLQLLPLYTMALTKNVAFRGGNDIRPDMRVYMMHLLSVMNVETSRVFTYPNLFALHTLEPDVGIPLPPSPPPAMDGSSPPPPLPPAVGKKQVKLPVAINLSAERFVSEGLYLLENGVSLYLWVGARADPQLLASLFGGMTSVDGVEGAALAQVFEDHEGKEGGSEYAKRVHALVQGLREERGLRWMGLQVVKEGEGGPEAVSFYWNLVEDRAAFSGGQYNYSEFMGMMGRGAGGG--GGVGGPPVGMGGPMGG 915
            MGLRPP Q       PP P  +P  A  +P  D  G   G+G  G +PGHYR PS+D +    P GMG       S +PGME ANQLPMLSEVDLSIAS+PRFMRFTVSKIPNSQNNAAATKLPLGVVIQPMALDASG+DSIDVVNFGATGIVRCKKCRTYINPFVSWHDAGRRWRCNVCGTLNDV SSYF+H+D+ GQRRDKHERPELSNGSVELVAPGEYMVRPPQPPVY+FV+DVSY +VASG L  TVE IK++LDALPGDPRTQFGLVTFDSTVHFYHFKP+LKMPQVLV+PDISELFLPLPED+LVNLKESREVID LLE+LP MYEKTR+M++ALGPALTGAYRVMAPVGGKMCVV A+MPTLGDGRLK REELRALGTEREH MLNPEESWYRTKAVEFSRVQISVDLF  APAGQQ+P+ DLASL AL KFTGGNLFYYPGF++EK DGRK+ EE+G +LTRPTGFEAVMRVRATRGLKVTQFYGNYYIRGTDLLALPNCSSESVFGVEMAHDEAFLTASVICVQAALLHT+S+GERRIRVHTVAAPVTAVLQEVIASVDVDTLCNLMAKR LEV LKTGLDAARHRLTQ CADLLRSCRAF   HQ QG   G   QQQQQPAG+P +L+LLPLYTMA+TKNVAFRGG DIRPD+R YMM L SVMNV TSR F +PNLFALHT+  + G+P+PPS   + D +       P  G+++++LPVA+NLS ERFVSEG+YLLENG+SLYLWVGARADP+ LA+LFGGMTSV+G +G  LAQ+FE  EGKE G +YA+RVHA+VQ LREER LRW+ +QVVKEG+ G EA S Y NLVEDRAAFSGGQYNY+EFMGM+ RG GGG  GG+GG     GG  GG
Sbjct:    1 MGLRPPHQPPPPPTHPPSPYSQPSHAQQHP--DLAGPQGGSGPAG-YPGHYRPPSMDYTGAPHPQGMGP------SPVPGMEAANQLPMLSEVDLSIASDPRFMRFTVSKIPNSQNNAAATKLPLGVVIQPMALDASGQDSIDVVNFGATGIVRCKKCRTYINPFVSWHDAGRRWRCNVCGTLNDVSSSYFNHLDEHGQRRDKHERPELSNGSVELVAPGEYMVRPPQPPVYLFVVDVSYSSVASGLLARTVETIKKNLDALPGDPRTQFGLVTFDSTVHFYHFKPSLKMPQVLVVPDISELFLPLPEDMLVNLKESREVIDLLLESLPEMYEKTRNMDSALGPALTGAYRVMAPVGGKMCVVLASMPTLGDGRLKPREELRALGTEREHAMLNPEESWYRTKAVEFSRVQISVDLFCVAPAGQQTPFMDLASLTALSKFTGGNLFYYPGFAMEK-DGRKLEEEMGRILTRPTGFEAVMRVRATRGLKVTQFYGNYYIRGTDLLALPNCSSESVFGVEMAHDEAFLTASVICVQAALLHTTSSGERRIRVHTVAAPVTAVLQEVIASVDVDTLCNLMAKRMLEVALKTGLDAARHRLTQLCADLLRSCRAF-STHQPQGRASGYQQQQQQQPAGIPSTLELLPLYTMAMTKNVAFRGGTDIRPDLRTYMMQLFSVMNVATSRAFIHPNLFALHTMGNEAGLPVPPSKDSSTDEA-------PTAGRQKIRLPVAVNLSGERFVSEGIYLLENGISLYLWVGARADPRQLAALFGGMTSVEGADGGVLAQLFE--EGKEEG-DYARRVHAIVQALREERSLRWLQVQVVKEGDAGLEASSLYRNLVEDRAAFSGGQYNYAEFMGMVSRGGGGGMPGGMGG-----GGTRGG 864

The following BLAST results are available for this feature:

BLAST of NO12G03950.1 vs.

BLAST of NO12G03950.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25640.1	0.000e+0	78.09	coatomer copii [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G03950	NO12G03950	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G03950.1	NO12G03950.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G03950.1.cds1	NO12G03950.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:1132757..1136169+
coding sequence from alignment at chr12:1132757..1136169+

mRNA sequence

>NO12G03950.1 ID=NO12G03950.1|Name=NO12G03950.1|organism=Nannochloropsis oceanica|type=mRNA|length=3413bp
ATGATGCAACAGCAGCAGCAGCAACCCCCACCTCCACCAGGAGGACCCCC
TGGAGTACAACAGCTCGCTGGCCAGTTCTCTCAAATGGGCTTGCGTCCTC
CCCAACAGCAGCAGCAGCAGCAGCAGCCGCCTCCCCCGCCAATGATGAAG
CCACCCTCCGCCTCTCCCTACCCCCAGCAAGACACGGTCGGCCTTCCCGC
CGGTGCGGGTACCGGTGGAGGCTTTCCAGGGCACTATCGCACACCTTCCC
TCGATACCTCAATTGGTGGTGCTCCGCCGGGGATGGGCGTACCTTCCATG
TCCTCAGGCAGCAACATGCCGGGGATGGAGAATGCCAACCAGTTGCCGAT
GCTATCGGAAGTGGATTTGTCGATTGCTTCCAACCCAAGATTTATGCGGT
TCACGGTCAGCAAGATCCCCAACAGTCAGAACAACGCGGCCGCGACGAAG
CTGCCGTTGGGGGTGGTGATTCAGCCCATGGCCTTGGATGCTTCAGGGGA
GGATTCGATAGATGTGGTGAATTTCGGGGCCACGGGCATCGTACGCTGTA
AGAAGTGTAGAACGTACATCAACCCCTTTGTGTCGTGGCATGACGCGGGC
CGACGGTGGCGGTGCAACGTGTGTGGGACTTTGAATGACGTCCCTTCCTC
TTATTTCCACCATGTTGACCAAGCGGGCCAGAGGAGGGATAAGCACGAGC
GGCCGGAGCTTTCGAATGGCTCGGTGGAGTTGGTGGCGCCGGGGGAGTAT
ATGGTAAGGCCACCTCAACCACCTGTGTATGTGTTTGTGCTGGACGTGTC
GTATGGCGCCGTGGCAAGTGGAGCGCTGGGCTGCACGGTGGAGATCATCA
AGAGACACCTCGATGCCCTTCCTGGCGACCCCCGGACGCAGTTTGGCCTG
GTCACATTCGACTCCACCGTGCACTTCTACCACTTCAAACCCACGCTAAA
GATGCCCCAGGTGCTGGTCATCCCTGACATATCCGAGCTTTTCTTGCCCC
TGCCGGAGGACTTGCTGGTGAATTTAAAGGAGTCTCGGGAGGTGATCGAC
TCCCTCCTGGAAGCCCTCCCGGGCATGTACGAGAAGACCCGCGACATGGA
AGCGGCCCTAGGGCCGGCCTTGACGGGCGCCTACCGGGTCATGGCGCCCG
TGGGAGGAAAGATGTGCGTGGTCACCGCCACCATGCCCACTTTGGGGGAT
GGTCGCCTGAAGCACCGGGAGGAGTTGCGGGCGCTGGGTACGGAAAGGGA
ACATGTCATGCTCAACCCGGAGGAGAGCTGGTATCGGACAAAGGCCGTTG
AGTTCTCACGGGTGCAGATTTCGGTGGATTTGTTTGTAGCGGCGCCGGCG
GGGCAACAGTCTCCCTATACAGACCTGGCGTCACTGGCGGCTTTGCCCAA
GTTCACGGGCGGGAACTTATTTTACTACCCGGGGTTCAGCGTGGAGAAGG
GCGATGGGCGGAAGATGGGGGAGGAGATTGGCTCGTTATTGACCAGGCCG
ACGGGCTTTGAGGCGGTGATGCGGGTGAGGGCAACGAGGGGGTTGAAGGT
AACGCAATTCTATGGTAATTATTACATTCGAGGAACGGACCTGTTGGCCT
TGCCGAATTGCTCGAGCGAGAGTGTGTTTGGCGTGGAAATGGCACACGAC
GAAGCTTTTTTGACGGCCTCGGTGATTTGTGTGCAGGCTGCCTTGCTCCA
CACCTCCTCCACGGGAGAACGCCGCATTCGGGTGCACACGGTGGCAGCGC
CCGTCACGGCCGTGCTGCAAGAGGTGATCGCTTCCGTGGATGTCGACACG
CTGTGTAATTTGATGGCCAAGCGCTCGTTGGAAGTAGTGCTCAAAACAGG
CCTGGACGCTGCTCGGCATCGTCTGACCCAGCAATGTGCCGACCTCCTTC
GCTCGTGCCGTGCATTTTGCATGCCCCACCAAGCGCAAGGACCGGGCAGC
TACCACCAGCAACAGCAACAGCCGGCCGGCCTGCCTCCCAGCCTGCAGCT
CCTGCCTCTCTATACCATGGCACTGACCAAGAACGTGGCCTTCCGAGGAG
GCAACGACATCCGACCTGACATGCGCGTGTACATGATGCACCTCCTGTCC
GTAATGAACGTGGAGACTTCGCGCGTCTTCACCTACCCCAACCTCTTTGC
CCTCCACACCCTCGAACCCGACGTCGGCATTCCCCTTCCACCCTCCCCTC
CCCCCGCAATGGACGGGAGCTCGCCTCCCCCCCCCCTCCCTCCTGCCGTC
GGCAAGAAACAAGTGAAACTGCCCGTAGCGATAAACCTGTCTGCCGAGCG
CTTTGTTTCCGAGGGGCTGTATCTCCTCGAGAACGGCGTCTCGCTATATC
TGTGGGTAGGGGCGAGGGCGGATCCCCAGCTGCTGGCGAGCCTGTTTGGA
GGCATGACCAGCGTGGACGGGGTGGAGGGAGCGGCGCTTGCGCAGGTGTT
CGAGGACCATGAAGGAAAGGAGGGAGGGAGTGAGTACGCGAAGAGAGTGC
ACGCCCTGGTGCAGGGTTTGAGGGAGGAGAGAGGGTTGCGGTGGATGGGG
CTGCAAGTGGTGAAAGAGGGAGAAGGTGGGCCGGAGGCTGTGTCGTTTTA
TTGGAACCTGGTGGAGGACCGGGCGGCCTTCTCAGGGGGGCAGTACAACT
ATAGTGAGTTTATGGGCATGATGGGTCGAGGTGCCGGGGGAGGAGGCGGG
GTTGGGGGACCGCCTGTAGGCATGGGGGGGCCGATGGGGGGAGCCCCGAT
GGGGGGGGCGCCGCCCGGGATGAGCCATGGTCCGCCTCCCGGGGGGATGA
GATGATACGGAATATGGTTGAGGGGAGGATGGGAGGGGGAAAAGAAAGAA
GGTTTTTTGTTTCTTAGGTGGATAGATTTTGGAACGAATTTGATAGAAGG
GAGGACAACGAAAAGACCTGAAGGAAGGGAGGAATGAAGGCGAAGGGTTC
TTTTAATCATTTGTCGTGTCTCTATATTCATTTCTTGCCCAGGGTTTGTG
GTTAACAGGCCATTTGGAGGGGGATGGATTGCAGGTAATTTGGGCGGGTG
GAGAGGAAGGAGAGGAAGCCACGTGGCCTTTGGATCTTTTCCCTCCTTAC
AATTCTAGTCAAAATAGTGAGCTCCATCATGCAGACAGACGAAAGGGGCG
CACTAGCACGAAAAACGAAGAGGGCGCAGACGAAATAGAGGGAGTAAGCG
GAAAAGATGAGGGAATTGAGTATCTTCAACATTAATAAGTAACCAAGCAA
GAGGAGCGATAAAGACCCATGACCCGCTCCAGTACTCGATGGTGCCTCAG
AGGAGGAAACGACCAAAATTGATGCCGACAACGACATTGCGGCAAGCAGG
AAAGAAGTTGGGAAATCGACCCCACGAATCGAATAAAAAGAAGGGCAAGA
ACGCTGCTGCCCC

protein sequence of NO12G03950.1

>NO12G03950.1-protein ID=NO12G03950.1-protein|Name=NO12G03950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=935bp
MMQQQQQQPPPPPGGPPGVQQLAGQFSQMGLRPPQQQQQQQQPPPPPMMK
PPSASPYPQQDTVGLPAGAGTGGGFPGHYRTPSLDTSIGGAPPGMGVPSM
SSGSNMPGMENANQLPMLSEVDLSIASNPRFMRFTVSKIPNSQNNAAATK
LPLGVVIQPMALDASGEDSIDVVNFGATGIVRCKKCRTYINPFVSWHDAG
RRWRCNVCGTLNDVPSSYFHHVDQAGQRRDKHERPELSNGSVELVAPGEY
MVRPPQPPVYVFVLDVSYGAVASGALGCTVEIIKRHLDALPGDPRTQFGL
VTFDSTVHFYHFKPTLKMPQVLVIPDISELFLPLPEDLLVNLKESREVID
SLLEALPGMYEKTRDMEAALGPALTGAYRVMAPVGGKMCVVTATMPTLGD
GRLKHREELRALGTEREHVMLNPEESWYRTKAVEFSRVQISVDLFVAAPA
GQQSPYTDLASLAALPKFTGGNLFYYPGFSVEKGDGRKMGEEIGSLLTRP
TGFEAVMRVRATRGLKVTQFYGNYYIRGTDLLALPNCSSESVFGVEMAHD
EAFLTASVICVQAALLHTSSTGERRIRVHTVAAPVTAVLQEVIASVDVDT
LCNLMAKRSLEVVLKTGLDAARHRLTQQCADLLRSCRAFCMPHQAQGPGS
YHQQQQQPAGLPPSLQLLPLYTMALTKNVAFRGGNDIRPDMRVYMMHLLS
VMNVETSRVFTYPNLFALHTLEPDVGIPLPPSPPPAMDGSSPPPPLPPAV
GKKQVKLPVAINLSAERFVSEGLYLLENGVSLYLWVGARADPQLLASLFG
GMTSVDGVEGAALAQVFEDHEGKEGGSEYAKRVHALVQGLREERGLRWMG
LQVVKEGEGGPEAVSFYWNLVEDRAAFSGGQYNYSEFMGMMGRGAGGGGG
VGGPPVGMGGPMGGAPMGGAPPGMSHGPPPGGMR*

mRNA from alignment at chr12:1132757..1136169+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G03950.1 ID=NO12G03950.1|Name=NO12G03950.1|organism=Nannochloropsis oceanica|type=mRNA|length=3413bp|location=Sequence derived from alignment at chr12:1132757..1136169+ (Nannochloropsis oceanica)
ATGATGCAACAGCAGCAGCAGCAACCCCCACCTCCACCAGGAGGACCCCC
TGGAGTACAACAGCTCGCTGGCCAGTTCTCTCAAATGGGCTTGCGTCCTC
CCCAACAGCAGCAGCAGCAGCAGCAGCCGCCTCCCCCGCCAATGATGAAG
CCACCCTCCGCCTCTCCCTACCCCCAGCAAGACACGGTCGGCCTTCCCGC
CGGTGCGGGTACCGGTGGAGGCTTTCCAGGGCACTATCGCACACCTTCCC
TCGATACCTCAATTGGTGGTGCTCCGCCGGGGATGGGCGTACCTTCCATG
TCCTCAGGCAGCAACATGCCGGGGATGGAGAATGCCAACCAGTTGCCGAT
GCTATCGGAAGTGGATTTGTCGATTGCTTCCAACCCAAGATTTATGCGGT
TCACGGTCAGCAAGATCCCCAACAGTCAGAACAACGCGGCCGCGACGAAG
CTGCCGTTGGGGGTGGTGATTCAGCCCATGGCCTTGGATGCTTCAGGGGA
GGATTCGATAGATGTGGTGAATTTCGGGGCCACGGGCATCGTACGCTGTA
AGAAGTGTAGAACGTACATCAACCCCTTTGTGTCGTGGCATGACGCGGGC
CGACGGTGGCGGTGCAACGTGTGTGGGACTTTGAATGACGTCCCTTCCTC
TTATTTCCACCATGTTGACCAAGCGGGCCAGAGGAGGGATAAGCACGAGC
GGCCGGAGCTTTCGAATGGCTCGGTGGAGTTGGTGGCGCCGGGGGAGTAT
ATGGTAAGGCCACCTCAACCACCTGTGTATGTGTTTGTGCTGGACGTGTC
GTATGGCGCCGTGGCAAGTGGAGCGCTGGGCTGCACGGTGGAGATCATCA
AGAGACACCTCGATGCCCTTCCTGGCGACCCCCGGACGCAGTTTGGCCTG
GTCACATTCGACTCCACCGTGCACTTCTACCACTTCAAACCCACGCTAAA
GATGCCCCAGGTGCTGGTCATCCCTGACATATCCGAGCTTTTCTTGCCCC
TGCCGGAGGACTTGCTGGTGAATTTAAAGGAGTCTCGGGAGGTGATCGAC
TCCCTCCTGGAAGCCCTCCCGGGCATGTACGAGAAGACCCGCGACATGGA
AGCGGCCCTAGGGCCGGCCTTGACGGGCGCCTACCGGGTCATGGCGCCCG
TGGGAGGAAAGATGTGCGTGGTCACCGCCACCATGCCCACTTTGGGGGAT
GGTCGCCTGAAGCACCGGGAGGAGTTGCGGGCGCTGGGTACGGAAAGGGA
ACATGTCATGCTCAACCCGGAGGAGAGCTGGTATCGGACAAAGGCCGTTG
AGTTCTCACGGGTGCAGATTTCGGTGGATTTGTTTGTAGCGGCGCCGGCG
GGGCAACAGTCTCCCTATACAGACCTGGCGTCACTGGCGGCTTTGCCCAA
GTTCACGGGCGGGAACTTATTTTACTACCCGGGGTTCAGCGTGGAGAAGG
GCGATGGGCGGAAGATGGGGGAGGAGATTGGCTCGTTATTGACCAGGCCG
ACGGGCTTTGAGGCGGTGATGCGGGTGAGGGCAACGAGGGGGTTGAAGGT
AACGCAATTCTATGGTAATTATTACATTCGAGGAACGGACCTGTTGGCCT
TGCCGAATTGCTCGAGCGAGAGTGTGTTTGGCGTGGAAATGGCACACGAC
GAAGCTTTTTTGACGGCCTCGGTGATTTGTGTGCAGGCTGCCTTGCTCCA
CACCTCCTCCACGGGAGAACGCCGCATTCGGGTGCACACGGTGGCAGCGC
CCGTCACGGCCGTGCTGCAAGAGGTGATCGCTTCCGTGGATGTCGACACG
CTGTGTAATTTGATGGCCAAGCGCTCGTTGGAAGTAGTGCTCAAAACAGG
CCTGGACGCTGCTCGGCATCGTCTGACCCAGCAATGTGCCGACCTCCTTC
GCTCGTGCCGTGCATTTTGCATGCCCCACCAAGCGCAAGGACCGGGCAGC
TACCACCAGCAACAGCAACAGCCGGCCGGCCTGCCTCCCAGCCTGCAGCT
CCTGCCTCTCTATACCATGGCACTGACCAAGAACGTGGCCTTCCGAGGAG
GCAACGACATCCGACCTGACATGCGCGTGTACATGATGCACCTCCTGTCC
GTAATGAACGTGGAGACTTCGCGCGTCTTCACCTACCCCAACCTCTTTGC
CCTCCACACCCTCGAACCCGACGTCGGCATTCCCCTTCCACCCTCCCCTC
CCCCCGCAATGGACGGGAGCTCGCCTCCCCCCCCCCTCCCTCCTGCCGTC
GGCAAGAAACAAGTGAAACTGCCCGTAGCGATAAACCTGTCTGCCGAGCG
CTTTGTTTCCGAGGGGCTGTATCTCCTCGAGAACGGCGTCTCGCTATATC
TGTGGGTAGGGGCGAGGGCGGATCCCCAGCTGCTGGCGAGCCTGTTTGGA
GGCATGACCAGCGTGGACGGGGTGGAGGGAGCGGCGCTTGCGCAGGTGTT
CGAGGACCATGAAGGAAAGGAGGGAGGGAGTGAGTACGCGAAGAGAGTGC
ACGCCCTGGTGCAGGGTTTGAGGGAGGAGAGAGGGTTGCGGTGGATGGGG
CTGCAAGTGGTGAAAGAGGGAGAAGGTGGGCCGGAGGCTGTGTCGTTTTA
TTGGAACCTGGTGGAGGACCGGGCGGCCTTCTCAGGGGGGCAGTACAACT
ATAGTGAGTTTATGGGCATGATGGGTCGAGGTGCCGGGGGAGGAGGCGGG
GTTGGGGGACCGCCTGTAGGCATGGGGGGGCCGATGGGGGGAGCCCCGAT
GGGGGGGGCGCCGCCCGGGATGAGCCATGGTCCGCCTCCCGGGGGGATGA
GATGATACGGAATATGGTTGAGGGGAGGATGGGAGGGGGAAAAGAAAGAA
GGTTTTTTGTTTCTTAGGTGGATAGATTTTGGAACGAATTTGATAGAAGG
GAGGACAACGAAAAGACCTGAAGGAAGGGAGGAATGAAGGCGAAGGGTTC
TTTTAATCATTTGTCGTGTCTCTATATTCATTTCTTGCCCAGGGTTTGTG
GTTAACAGGCCATTTGGAGGGGGATGGATTGCAGGTAATTTGGGCGGGTG
GAGAGGAAGGAGAGGAAGCCACGTGGCCTTTGGATCTTTTCCCTCCTTAC
AATTCTAGTCAAAATAGTGAGCTCCATCATGCAGACAGACGAAAGGGGCG
CACTAGCACGAAAAACGAAGAGGGCGCAGACGAAATAGAGGGAGTAAGCG
GAAAAGATGAGGGAATTGAGTATCTTCAACATTAATAAGTAACCAAGCAA
GAGGAGCGATAAAGACCCATGACCCGCTCCAGTACTCGATGGTGCCTCAG
AGGAGGAAACGACCAAAATTGATGCCGACAACGACATTGCGGCAAGCAGG
AAAGAAGTTGGGAAATCGACCCCACGAATCGAATAAAAAGAAGGGCAAGA
ACGCTGCTGCCCC

Coding sequence (CDS) from alignment at chr12:1132757..1136169+

>NO12G03950.1 ID=NO12G03950.1|Name=NO12G03950.1|organism=Nannochloropsis oceanica|type=CDS|length=2805bp|location=Sequence derived from alignment at chr12:1132757..1136169+ (Nannochloropsis oceanica)
ATGATGCAACAGCAGCAGCAGCAACCCCCACCTCCACCAGGAGGACCCCC
TGGAGTACAACAGCTCGCTGGCCAGTTCTCTCAAATGGGCTTGCGTCCTC
CCCAACAGCAGCAGCAGCAGCAGCAGCCGCCTCCCCCGCCAATGATGAAG
CCACCCTCCGCCTCTCCCTACCCCCAGCAAGACACGGTCGGCCTTCCCGC
CGGTGCGGGTACCGGTGGAGGCTTTCCAGGGCACTATCGCACACCTTCCC
TCGATACCTCAATTGGTGGTGCTCCGCCGGGGATGGGCGTACCTTCCATG
TCCTCAGGCAGCAACATGCCGGGGATGGAGAATGCCAACCAGTTGCCGAT
GCTATCGGAAGTGGATTTGTCGATTGCTTCCAACCCAAGATTTATGCGGT
TCACGGTCAGCAAGATCCCCAACAGTCAGAACAACGCGGCCGCGACGAAG
CTGCCGTTGGGGGTGGTGATTCAGCCCATGGCCTTGGATGCTTCAGGGGA
GGATTCGATAGATGTGGTGAATTTCGGGGCCACGGGCATCGTACGCTGTA
AGAAGTGTAGAACGTACATCAACCCCTTTGTGTCGTGGCATGACGCGGGC
CGACGGTGGCGGTGCAACGTGTGTGGGACTTTGAATGACGTCCCTTCCTC
TTATTTCCACCATGTTGACCAAGCGGGCCAGAGGAGGGATAAGCACGAGC
GGCCGGAGCTTTCGAATGGCTCGGTGGAGTTGGTGGCGCCGGGGGAGTAT
ATGGTAAGGCCACCTCAACCACCTGTGTATGTGTTTGTGCTGGACGTGTC
GTATGGCGCCGTGGCAAGTGGAGCGCTGGGCTGCACGGTGGAGATCATCA
AGAGACACCTCGATGCCCTTCCTGGCGACCCCCGGACGCAGTTTGGCCTG
GTCACATTCGACTCCACCGTGCACTTCTACCACTTCAAACCCACGCTAAA
GATGCCCCAGGTGCTGGTCATCCCTGACATATCCGAGCTTTTCTTGCCCC
TGCCGGAGGACTTGCTGGTGAATTTAAAGGAGTCTCGGGAGGTGATCGAC
TCCCTCCTGGAAGCCCTCCCGGGCATGTACGAGAAGACCCGCGACATGGA
AGCGGCCCTAGGGCCGGCCTTGACGGGCGCCTACCGGGTCATGGCGCCCG
TGGGAGGAAAGATGTGCGTGGTCACCGCCACCATGCCCACTTTGGGGGAT
GGTCGCCTGAAGCACCGGGAGGAGTTGCGGGCGCTGGGTACGGAAAGGGA
ACATGTCATGCTCAACCCGGAGGAGAGCTGGTATCGGACAAAGGCCGTTG
AGTTCTCACGGGTGCAGATTTCGGTGGATTTGTTTGTAGCGGCGCCGGCG
GGGCAACAGTCTCCCTATACAGACCTGGCGTCACTGGCGGCTTTGCCCAA
GTTCACGGGCGGGAACTTATTTTACTACCCGGGGTTCAGCGTGGAGAAGG
GCGATGGGCGGAAGATGGGGGAGGAGATTGGCTCGTTATTGACCAGGCCG
ACGGGCTTTGAGGCGGTGATGCGGGTGAGGGCAACGAGGGGGTTGAAGGT
AACGCAATTCTATGGTAATTATTACATTCGAGGAACGGACCTGTTGGCCT
TGCCGAATTGCTCGAGCGAGAGTGTGTTTGGCGTGGAAATGGCACACGAC
GAAGCTTTTTTGACGGCCTCGGTGATTTGTGTGCAGGCTGCCTTGCTCCA
CACCTCCTCCACGGGAGAACGCCGCATTCGGGTGCACACGGTGGCAGCGC
CCGTCACGGCCGTGCTGCAAGAGGTGATCGCTTCCGTGGATGTCGACACG
CTGTGTAATTTGATGGCCAAGCGCTCGTTGGAAGTAGTGCTCAAAACAGG
CCTGGACGCTGCTCGGCATCGTCTGACCCAGCAATGTGCCGACCTCCTTC
GCTCGTGCCGTGCATTTTGCATGCCCCACCAAGCGCAAGGACCGGGCAGC
TACCACCAGCAACAGCAACAGCCGGCCGGCCTGCCTCCCAGCCTGCAGCT
CCTGCCTCTCTATACCATGGCACTGACCAAGAACGTGGCCTTCCGAGGAG
GCAACGACATCCGACCTGACATGCGCGTGTACATGATGCACCTCCTGTCC
GTAATGAACGTGGAGACTTCGCGCGTCTTCACCTACCCCAACCTCTTTGC
CCTCCACACCCTCGAACCCGACGTCGGCATTCCCCTTCCACCCTCCCCTC
CCCCCGCAATGGACGGGAGCTCGCCTCCCCCCCCCCTCCCTCCTGCCGTC
GGCAAGAAACAAGTGAAACTGCCCGTAGCGATAAACCTGTCTGCCGAGCG
CTTTGTTTCCGAGGGGCTGTATCTCCTCGAGAACGGCGTCTCGCTATATC
TGTGGGTAGGGGCGAGGGCGGATCCCCAGCTGCTGGCGAGCCTGTTTGGA
GGCATGACCAGCGTGGACGGGGTGGAGGGAGCGGCGCTTGCGCAGGTGTT
CGAGGACCATGAAGGAAAGGAGGGAGGGAGTGAGTACGCGAAGAGAGTGC
ACGCCCTGGTGCAGGGTTTGAGGGAGGAGAGAGGGTTGCGGTGGATGGGG
CTGCAAGTGGTGAAAGAGGGAGAAGGTGGGCCGGAGGCTGTGTCGTTTTA
TTGGAACCTGGTGGAGGACCGGGCGGCCTTCTCAGGGGGGCAGTACAACT
ATAGTGAGTTTATGGGCATGATGGGTCGAGGTGCCGGGGGAGGAGGCGGG
GTTGGGGGACCGCCTGTAGGCATGGGGGGGCCGATGGGGGGAGCCCCGAT
GGGGGGGGCGCCGCCCGGGATGAGCCATGGTCCGCCTCCCGGGGGGATGA
GATGA

Synonyms

Publications