NO12G03240.1, NO12G03240.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G03240.1
Unique Name	NO12G03240.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4715
Alignment location	chr12:896673..902823 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:896673..902823 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G03240.1 vs.
Match: EWM25730.1 (superkiller viralicidic activity 2-like 2 [Nannochloropsis gaditana])

HSP 1 Score: 1123.6 bits (2905), Expect = 0.000e+0
Identity = 597/733 (81.45%), Postives = 629/733 (85.81%), Query Frame = 0

Query:   19 PSVHTLPPTHNHTEVSMDDGDLNDLFGAFDGDDVAETVEPIAPPPISPASPTATKRKSISTSEVAVAAREGNGNRNNDEGYNENEEDDEAGKEGRSKRPRKSDGNDPGPSKGVQPTITQHQEIITPDGRRVISFSALPADYVAHDFMPPAQPAKTYAFPLDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAEGGEEEGASKKKSGGGREGGKGAGQQSELGKIVRLIMERSYDPVIIFSFSKRECEAYALKMGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGEPDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEAAELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVLSFLKKGRLVCVKEEGKEGGREGAKEWGWGAVVGYKAVDVSKARAGLPGGGG 752
            P++  + P    + +SMD G+LNDLFGAFDG+DVAETV PIA P ++PA   A KRK ++     V A  G    NN       + ++E G  G SKR R S+G      KG +PTITQHQEIITPDGRRVISFSALPADY   +F PPA+PAK YAF LDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGG GLYLVVDEKSRFRE+NFQKAMAVLQ EGGEEE   KKK+GG        GQQSELGKIVRLIMERSYDPVIIFSFSKRECEAYALKM KLDFNEEGEKELVEQVF NAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMM+SKMEPD+CK +LYGEPDKLYSSYHVSYNMLLNMLRVQG NPEFLVRSSFHQYQQE+AAPALEKEA  +E  AR V IEGG EGEA  AEY+A  +Q E IKKEMRKYTQDP++VLSFLKKGRL  V EE  EG R    +WGWGAVVGYK VD  K ++    GGG
Sbjct:   55 PAMPIIQPHGAISSLSMDGGELNDLFGAFDGEDVAETVAPIAAPGLTPAKADA-KRKGLTNG---VKAAGGEMEDNN------GDVEEELGA-GPSKRSRNSEGT--ALDKGQEPTITQHQEIITPDGRRVISFSALPADYTPSEFTPPARPAKEYAFALDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYRPVPLQHYIFPSGGEGLYLVVDEKSRFREDNFQKAMAVLQGEGGEEESGKKKKNGG-------KGQQSELGKIVRLIMERSYDPVIIFSFSKRECEAYALKMSKLDFNEEGEKELVEQVFTNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMDSKMEPDVCKAILYGEPDKLYSSYHVSYNMLLNMLRVQGVNPEFLVRSSFHQYQQEAAAPALEKEAESIEAVARGVKIEGGTEGEAAAAEYYACRSQWEEIKKEMRKYTQDPEIVLSFLKKGRLAYVVEETPEGKR----DWGWGAVVGYKVVDGGKVKSKTQEGGG 763

The following BLAST results are available for this feature:

BLAST of NO12G03240.1 vs.

BLAST of NO12G03240.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25730.1	0.000e+0	81.45	superkiller viralicidic activity 2-like 2 [Nannoch...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G03240	NO12G03240	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G03240.1	NO12G03240.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G03240.1.cds1	NO12G03240.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03240.1.cds2	NO12G03240.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03240.1.cds3	NO12G03240.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03240.1.cds4	NO12G03240.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03240.1.cds5	NO12G03240.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G03240.1.cds6	NO12G03240.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:896673..902823+
coding sequence from alignment at chr12:896673..902823+

mRNA sequence

>NO12G03240.1 ID=NO12G03240.1|Name=NO12G03240.1|organism=Nannochloropsis oceanica|type=mRNA|length=4715bp
GGGCCATCTTCAGACTCATGAGAGCACCGCTTGTGGTGGCTTCTTCGAAC
CCTCACCATATATCCTTTAACAACGCGCATACTGCATAGGCATGCCATCG
ACACAGAACATATCCCAACATGAGGACATGGAGCGTGGGACGGCTCAGGG
CGCAATGTCACAGGCACTCCCACCGTCGCAAGGGCACCTTTTGCCTGTGT
CCTCTCTGCAAGCCTCCATGCCTCCAGGGGAGACTGATGAATGCACGTGG
GCGTGCTTTGTGTAAGTGCTTGCCCCGAGAGGAGAATATTCTACACTCTT
TTTCCGTATGAACTTTTATAGTGTTGTGAGTCTCACTAGCTATGAGGGTT
GCGACGTGGAGGGGGCCACGTTGCGGCACGAAGGGTAGAGCTATTCGAGA
GCGGAGCGAGGGTGATAGGCCGTCAAACATTTTCTCACTGTGTCGTGCAC
GCTTTTTTTGCTCTAGGATCTGTCATATTTTGTATGTAAACCGCCCGTTG
TGTATCCTCCGTCTTTCGCTTCACAATACTTATGAGGCATCGCGGCTTGT
GAGTGTGAAATTATGAAACACCAGAGGTCCCGTGCAGAGAGGAATTCATT
TGATACGCTCGTAACATTGCTCCGGTCCTGTTGGTCAGTGCCATCCTCAT
TCTCATAATCTATTTTGCAATTGTGCACCCCCGAAAGACATAATCTCCCC
CTCTCCGACCCTCCTTCTCTTCCGCTTGTTTCTCAAAATGACGCCCGCGA
GACATTCCCGGAAAGCCCTCTAAATCTGTGTCCACAGCAGAAGGGACCGG
GCCGGACTGACAGGCAGCAGCATTGAGGCAGGATGGTGGCGTCGGGCAAA
GAACTCCGAAAGGAGAAACAAGGAGGCATGTACATATGGAAAGGTTGAAA
GTATAGAGAAAAAAAGGATTTATTGGAATCTAGATGAAAATCCTCTAGAT
CTAAAGAGAGGAATATAATAACAAGTTCTCGTTCGCTCTTTCACCCACTG
ATCCTTTTTCCAGTCTTCTTTCGTTTCTTCCTTCTTTAACGCCTTCAAAA
AATGCACAAGCAGATCAATCATCTACGGCGATGGTTACGATATCCCTCTC
CTCCTTCTCCTCCTCTTTTCTTGCCCATCGTCCCCTCCTTCGGCCCTACT
TCCTCACTCCCCTCTCCCGCCCCGACCCCCAATCCAACGCCTTCAGGGCC
GCCTTCAACGGCGCCGGCAACGTCTCGTCCTCCTCCTCTCCCTCCATCCC
CTCCTCCCCCACACCCTTGCCTTGAAACACGTACGCGTATCCATAACTCG
CTCCAGTGGCCACTGCATTGGCCCACCAGATGGTGGGCATGTCCTTCGTT
AGGAAAGGCATCCCCAAGCTCACGATCGGGGTTAGCAAAAACGCCACATC
TAAAGCCTTCTTCTCAGTCTGTCCCGGCTTTCGTGCTCTTAATGACGGAA
TGGTAAACATCCAGAAGCTCCAAAACGCGAACGCTCGGACGGGTAACGGT
AAGTGGTCGAATCCCGGCAGTGCATCATATACTACCACTCCTGACAAGGC
GACAGCTCCCAGGGACTGCCCCAAGAACAGATTTTTCAACCACCCACGCA
TAACCAGTCGTTTTTCTGTGGCAAGTTGTGTCTCCTTCTTCTGGATTTGC
TTTTCGAGCGTCGCGAGGGCCTTGTTGTCGTCGGTGGTATCGCGCTCGTT
CCGCAAATTGATCAAATCAAACTCCAGATTAACGACCTTTGAAGGGTTTA
GAAGCTGGTCGAGCTCCACGCCCGTCTCACGCAAGACCTCGTCGCGGATA
CGTTGCACCATTGGATCATCTTCCGAGATGCCCTTACGCTCTTGTTGTTG
TTCCCGTTCCGTGACAGCTGTACGGGTCGCGACAGGTCTTCTAATGCTAC
TAGTGATGCCGATGGCCTGGCTGGAAGCGGGCGAAGGCAGAAGGAACGCA
TGTGTGCTTGCGAGCAACAGGGAAGAGACGAGGATCAGGGCGGCGTTGAG
CGCCGCATGTCTGGCCGTCATGATAAGATGTAGGGGGCTTGAGGTGGGGC
ACGCGGGCTTCGACCTAGCCTGACTAAGCGATGCTGTGTAGGTTGAGGGG
AGACAAGCAGTTAGAAAGGAGACCAGGGCAGGCTTCAGGATTGTTAAACA
GGGTTGTACGCAAGTCATCTTGGTGCCTGTATGAGGGGAATGGGTTCTTA
CTCCTTTCCCATTCACAAAGAGTCAGATCACGACCGTGGCGGGACTAGGC
GGGACTAGTATATTCCCCGAGTCCTCATCCATTCGCTGGAGGTGGTCCCT
ATCCTCGCATCAGTAGCATCACAAAGAGTAGAAGGGGGTGTGGAAAAAAT
CGTGCGTCAATAGCATTAAAGTCGCAGTGACTTAATTCGACTTATTTCTT
ATTTCTGTGGAGTGCACCCTCGGGAGGGCTTTTTTGATATGCTGTCCCCT
CCCGACCTCCCCACCCAAAGACGTTGCCCTGCCCCTTACCATCCGTCTGT
CCACACCTTACCCCCTACACACAACCACACAGAGGTAAGCATGGATGATG
GCGATTTGAACGACCTGTTTGGGGCTTTTGACGGGGACGACGTGGCTGAG
ACCGTGGAACCGATCGCGCCCCCGCCCATCTCTCCTGCTTCTCCCACTGC
TACCAAGCGCAAGTCCATCTCAACAAGTGAAGTTGCGGTGGCCGCCAGAG
AAGGAAATGGCAACCGCAACAATGATGAAGGCTACAATGAGAACGAGGAG
GATGACGAGGCAGGCAAGGAGGGACGGAGCAAGCGTCCGCGCAAGTCCGA
TGGCAACGACCCTGGTCCCTCAAAGGGTGTGCAACCCACCATCACCCAAC
ACCAAGAAATCATCACTCCCGACGGCCGGCGCGTCATTTCCTTCTCGGCC
CTCCCCGCCGATTACGTCGCCCACGATTTTATGCCACCCGCGCAGCCTGC
CAAGACATATGCCTTTCCCCTCGACCCATTCCAACAAGCCGCCATTGGCT
TCATTGAAAAGGGCGAGTCCGTCCTCGTTGCTGCACACACTTCCGCAGGC
AAGACTGTCACGGCCGAGTACGCCATTGCCATGAGCCTGCAGAAGAAACA
ACGGGTGATTTATACGTCGCCAATCAAGGCGTTATCGAATCAGAAGTACC
GAGACATGGCCGAGGAGTTTGGGGATGTAGGCTTGATGACGGGCGACATC
ACCATTAACCCTTCCGCGACCTGCCTCATCATGACCACTGAAATTCTCCG
CTCGATGCTTTACCGCGGGAGTGAGATCATGCGAGAGGTGGCTTGGGTGA
TTTACGATGAGATTCACTACATGCGGGACAAGGACCGGGGAGTGGTGTGG
GAGGAAAGCATCATCCTCCTCCCCCACAAGGTACGCTTCGTTTTTCTCTC
GGCCACCATCCCCAACAGCCAAGAATTCGCAGGCTGGATCGCCACCATCC
ACCACCAGCCCTGTCACGTCGTTTACACCGATTACCGGCCCGTGCCCTTG
CAGCATTACATCTTTCCTTCAGGAGGGGTGGGGTTGTACCTGGTCGTGGA
CGAGAAGAGTCGGTTCCGAGAGGAAAATTTCCAAAAGGCCATGGCGGTGT
TGCAGGCAGAGGGAGGGGAGGAAGAAGGGGCAAGCAAGAAAAAGAGTGGG
GGGGGTAGGGAGGGAGGGAAGGGAGCGGGGCAGCAGAGCGAATTGGGGAA
GATCGTGCGATTGATTATGGAGAGGTCTTATGACCCTGTGATTATTTTTT
CCTTCTCTAAGAGGGAGTGTGAGGCGTATGCCCTCAAGATGGGGAAGCTG
GATTTCAACGAGGAGGGGGAGAAAGAGCTCGTGGAGCAGGTGTTTAACAA
CGCCATCGACTCCCTCTCGGAGGAGGACAAGACCCTCCCTCAAGTCGTCT
CCCTCCTCCCCCTCCTCAAGCGTGGCGTCGGCATCCATCACGGTGGCCTC
CTTCCCATTCTTAAGGAAATTATCGAAATCCTCTTCCAGGAAGGATTAAT
TAAGTGTTTGTTTGCCACCGAGACCTTCTCCATTGGTATCAACATGCCTG
CCAAGACCGTTGTCTTCACCCAATGCACCAAATTCGACGGCAAGGACTTC
CGGTGGGTCACCCCAGGGGAATACATCCAGATGAGCGGTCGAGCCGGGCG
ACGAGGGAAGGACGACAGGGGGATTGTGATCATGATGATGAACAGCAAGA
TGGAGCCTGACATCTGTAAGACCATGCTCTATGGAGAACCGGACAAGCTC
TACTCCTCCTATCACGTGTCCTACAACATGCTCCTTAATATGCTCAGGGT
TCAAGGCGCCAACCCCGAGTTCCTCGTCCGTTCGTCTTTTCACCAGTACC
AACAGGAGTCTGCAGCCCCCGCCCTCGAAAAAGAAGCAGCAGAGTTAGAA
GAGGCTGCGAGGGAGGTCACGATCGAGGGAGGGAAGGAGGGCGAGGCGGA
AGTCGCTGAATATTTTGCGTGGAATAATCAGTTGGAGGGAATCAAGAAGG
AGATGAGAAAATACACTCAGGATCCCGATGTCGTCTTGTCCTTTTTGAAG
AAGGGAAGGTTGGTCTGTGTGAAGGAGGAGGGGAAGGAAGGAGGGAGGGA
GGGAGCGAAGGAGTGGGGGTGGGGAGCTGTAGTAGGGTATAAGGCCGTAG
ATGTGAGCAAGGCCAGGGCGGGCTTGCCGGGGGGGGGGGGGCGGTGGTGG
GTGCAGGGAAGGTAG

protein sequence of NO12G03240.1

>NO12G03240.1-protein ID=NO12G03240.1-protein|Name=NO12G03240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=759bp
MLSPPDLPTQRRCPAPYHPSVHTLPPTHNHTEVSMDDGDLNDLFGAFDGD
DVAETVEPIAPPPISPASPTATKRKSISTSEVAVAAREGNGNRNNDEGYN
ENEEDDEAGKEGRSKRPRKSDGNDPGPSKGVQPTITQHQEIITPDGRRVI
SFSALPADYVAHDFMPPAQPAKTYAFPLDPFQQAAIGFIEKGESVLVAAH
TSAGKTVTAEYAIAMSLQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLM
TGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKDR
GVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIATIHHQPCHVVYTDYR
PVPLQHYIFPSGGVGLYLVVDEKSRFREENFQKAMAVLQAEGGEEEGASK
KKSGGGREGGKGAGQQSELGKIVRLIMERSYDPVIIFSFSKRECEAYALK
MGKLDFNEEGEKELVEQVFNNAIDSLSEEDKTLPQVVSLLPLLKRGVGIH
HGGLLPILKEIIEILFQEGLIKCLFATETFSIGINMPAKTVVFTQCTKFD
GKDFRWVTPGEYIQMSGRAGRRGKDDRGIVIMMMNSKMEPDICKTMLYGE
PDKLYSSYHVSYNMLLNMLRVQGANPEFLVRSSFHQYQQESAAPALEKEA
AELEEAAREVTIEGGKEGEAEVAEYFAWNNQLEGIKKEMRKYTQDPDVVL
SFLKKGRLVCVKEEGKEGGREGAKEWGWGAVVGYKAVDVSKARAGLPGGG
GRWWVQGR*

mRNA from alignment at chr12:896673..902823+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G03240.1 ID=NO12G03240.1|Name=NO12G03240.1|organism=Nannochloropsis oceanica|type=mRNA|length=6151bp|location=Sequence derived from alignment at chr12:896673..902823+ (Nannochloropsis oceanica)
GGGCCATCTTCAGACTCATGAGAGCACCGCTTGTGGTGGCTTCTTCGAAC
CCTCACCATATATCCTTTAACAACGCGCATACTGCATAGGCATGCCATCG
ACACAGAACATATCCCAACATGAGGACATGGAGCGTGGGACGGCTCAGGG
CGCAATGTCACAGGCACTCCCACCGTCGCAAGGGCACCTTTTGCCTGTGT
CCTCTCTGCAAGCCTCCATGCCTCCAGGGGAGACTGATGAATGCACGTGG
GCGTGCTTTGTGTAAGTGCTTGCCCCGAGAGGAGAATATTCTACACTCTT
TTTCCGTATGAACTTTTATAGTGTTGTGAGTCTCACTAGCTATGAGGGTT
GCGACGTGGAGGGGGCCACGTTGCGGCACGAAGGGTAGAGCTATTCGAGA
GCGGAGCGAGGGTGATAGGCCGTCAAACATTTTCTCACTGTGTCGTGCAC
GCTTTTTTTGCTCTAGGATCTGTCATATTTTGTATGTAAACCGCCCGTTG
TGTATCCTCCGTCTTTCGCTTCACAATACTTATGAGGCATCGCGGCTTGT
GAGTGTGAAATTATGAAACACCAGAGGTCCCGTGCAGGTGGGTAGACGGA
CCCGTCTCCATGGATAACTATATTTGAGTGATTTGAGATGCCTGTCTTTG
GCCTCGATGCGTGGAGTTTCGATATATTGCTGCTTTCATCGAAATCTACC
TTGTCACTCAAAATGGTGGCATCGACGTTCTCCCCCCTCCCTTCCTTTCC
CCCTCCAAACCCCCTTCAATCACAACTACAGAGAGGAATTCATTTGATAC
GCTCGTAACATTGCTCCGGTCCTGTTGGTCAGTGCCATCCTCATTCTCAT
AATCTATTTTGCAATTGTGCACCCCCGAAAGACATAATCTCCCCCTCTCC
GACCCTCCTTCTCTTCCGCTTGTTTCTCAAAATGACGCCCGCGAGACATT
CCCGGAAAGCCCTCTAAATCTGTGTCCACAGCAGAAGGGACCGGGCCGGA
CTGACAGGCAGCAGCATTGAGGCAGGATGGTGGCGTCGGGCAAAGAACTC
CGAAAGGAGAAACAAGGAGGCATGTACATATGGAAAGGTTGAAAGTATAG
AGAAAAAAAGGATTTATTGGAATCTAGATGAAAATCCTCTAGATCTAAAG
AGAGGAATATAATAACAAGTTCTCGTTCGCTCTTTCACCCACTGATCCTT
TTTCCAGTCTTCTTTCGTTTCTTCCTTCTTTAACGCCTTCAAAAAATGCA
CAAGCAGATCAATCATCTACGGCGATGGTTACGATATCCCTCTCCTCCTT
CTCCTCCTCTTTTCTTGCCCATCGTCCCCTCCTTCGGCCCTACTTCCTCA
CTCCCCTCTCCCGCCCCGACCCCCAATCCAACGCCTTCAGGGCCGCCTTC
AACGGCGCCGGCAACGTCTCGTCCTCCTCCTCTCCCTCCATCCCCTCCTC
CCCCACACCCTTGCCTTGAAACACGTACGCGTATCCATAACTCGCTCCAG
TGGCCACTGCATTGGCCCACCAGATGGTGGGCATGTCCTTCGTTAGGAAA
GGCATCCCCAAGCTCACGATCGGGGTTAGCAAAAACGCCACATCTAAAGC
CTTCTTCTCAGTCTGTCCCGGCTTTCGTGCTCTTAATGACGGAATGGTAA
ACATCCAGAAGCTCCAAAACGCGAACGCTCGGACGGGTAACGGTAAGTGG
TCGAATCCCGGCAGTGCATCATATACTACCACTCCTGACAAGGCGACAGC
TCCCAGGGACTGCCCCAAGAACAGATTTTTCAACCACCCACGCATAACCA
GTCGTTTTTCTGTGGCAAGTTGTGTCTCCTTCTTCTGGATTTGCTTTTCG
AGCGTCGCGAGGGCCTTGTTGTCGTCGGTGGTATCGCGCTCGTTCCGCAA
ATTGATCAAATCAAACTCCAGATTAACGACCTTTGAAGGGTTTAGAAGCT
GGTCGAGCTCCACGCCCGTCTCACGCAAGACCTCGTCGCGGATACGTTGC
ACCATTGGATCATCTTCCGAGATGCCCTTACGCTCTTGTTGTTGTTCCCG
TTCCGTGACAGCTGTACGGGTCGCGACAGGTCTTCTAATGCTACTAGTGA
TGCCGATGGCCTGGCTGGAAGCGGGCGAAGGCAGAAGGAACGCATGTGTG
CTTGCGAGCAACAGGGAAGAGACGAGGATCAGGGCGGCGTTGAGCGCCGC
ATGTCTGGCCGTCATGATAAGATGTAGGGGGCTTGAGGTGGGGCACGCGG
GCTTCGACCTAGCCTGACTAAGCGATGCTGTGTAGGTTGAGGGGAGACAA
GCAGTTAGAAAGGAGACCAGGGCAGGCTTCAGGATTGTTAAACAGGGTTG
TACGCAAGTCATCTTGGTGCCTGTATGAGGGGAATGGGTTCTTACTCCTT
TCCCATTCACAAAGAGTCAGATCACGACCGTGGCGGGACTAGGCGGGACT
AGTATATTCCCCGAGTCCTCATCCATTCGCTGGAGGTGGTCCCTATCCTC
GCATCAGTAGCATCACAAAGAGTAGAAGGGGGTGTGGAAAAAATCGTGCG
TCAATAGCATTAAAGTCGCAGTGACTTAATTCGACTTATTTCTTATTTCT
GTGGAGTGCACCCTCGGGAGGGCTTTTTTGATATGCTGTCCCCTCCCGAC
CTCCCCACCCAAAGACGTTGCCCTGCCCCTTACCATCCGTCTGTCCACAC
CTTACCCCCTACACACAACCACACAGAGGTAAGCATGGATGATGGCGATT
TGAACGACCTGTTTGGGGCTTTTGACGGGGACGACGTGGCTGAGACCGTG
GAACCGATCGCGCCCCCGCCCATCTCTCCTGCTTCTCCCACTGCTACCAA
GCGCAAGTCCATCTCAACAAGTGAAGTTGCGGTGGCCGCCAGAGAAGGAA
ATGGCAACCGCAACAATGATGAAGGCTACAATGAGAACGAGGAGGATGAC
GAGGCAGGCAAGGAGGGACGGAGCAAGCGTCCGCGCAAGTCCGATGGCAA
CGACCCTGGTCCCTCAAAGGGTGTGCAACCCACCATCACCCAACACCAAG
AAATCATCACTCCCGACGGCCGGCGCGTCATTTCCTTCTCGGCCCTCCCC
GCCGATTACGTCGCCCACGATTTTATGCCACCCGCGCAGCCTGCCAAGAC
ATATGCCTTTCCCCTCGACCCATTCCAACAAGCCGCCATTGGCTTCATTG
AAAAGGGCGAGTCCGTCCTCGTTGCTGCACACACTTCCGCAGGCAAGACT
GTCACGGCCGAGTACGCCATTGCCATGAGCCTGCAGAAGAAACAACGGGT
GATTTATACGTCGCCAATCAAGGCGTTATCGAATCAGAAGTACCGAGACA
TGGCCGAGGAGTTTGGGGATGTAGGCTTGATGACGGTACGTGCGTTTAAG
TGCGAGAAGCCCCCCTTCATCTCACACTGTGCGTTTAGGGGGGGTAAGAT
ACATATGGTTTTCTATATCGGCTTATCTGCGAAGCGTGCTTCGTATTTTA
TACCCTTACCACCCTCTTGGACGAGGAGAGAACCCTGTGCTCATGCCCTC
CCTCCTTCGCTCCCTCCCTCCCTCTTCGCACAGGGCGACATCACCATTAA
CCCTTCCGCGACCTGCCTCATCATGACCACTGAAATTCTCCGCTCGATGC
TTTACCGCGGGAGTGAGATCATGCGAGAGGTGGCTTGGGTGATTTACGAT
GAGATTCACTACATGCGGGACAAGGACCGGGGAGTGGTGTGGGAGGTATG
TTCTCTCTACCCTACCGCCTCCCCTCCCCTCCCTCCCGCCGAATGAAGAC
TGAGTCCTTCCCCCTTCCTTCCTGCCCTCCCTCCCTCCCTTCTCCACCTC
CAGGAAAGCATCATCCTCCTCCCCCACAAGGTACGCTTCGTTTTTCTCTC
GGCCACCATCCCCAACAGCCAAGAATTCGCAGGCTGGATCGCCACCATCC
ACCACCAGCCCTGTCACGTCGTTTACACCGATTACCGGCCCGTGCCCTTG
CAGCATTACATCTTTCCTTCAGGAGGGGTGGGGTTGTACCTGGTCGTGGA
CGAGAAGAGTCGGTTCCGAGAGGAAAATTTCCAAAAGGCCATGGCGGTGT
TGCAGGCAGAGGGAGGGGAGGAAGAAGGGGCAAGCAAGAAAAAGAGTGGG
GGGGGTAGGGAGGGAGGGAAGGGAGCGGGGCAGCAGAGCGAATTGGGGAA
GATCGTGCGATTGATTATGGAGAGGTCTTATGACCCTGTGATTATTTTTT
CCTTCTCTAAGAGGGAGTGTGAGGCGTATGCCCTCAAGATGGGGAAGCTG
GATTTCAACGAGGAGGGGGAGAAAGAGCTCGTGGAGCAGGTAGGGAGCGA
GGGACGGAGGGAGGGAAAATGTATGTCACACGGGAACTTTCGAGAAACGA
TTGTGAGATATGCGCGATGAAGATTGAGAAGGCACGCCGACTGTCATGAA
GAGAGGGGGAAACGCCTGCCGGGGCATTTAAGAGTATCTTTTACATACCT
TCTTTCTCTCTCATGTTAACGTTTTTCTTCCTCACTGCGACCGTCCTTCC
CTTCCTCCCTCCCTCCCTCCCTCCCCAAGGTGTTTAACAACGCCATCGAC
TCCCTCTCGGAGGAGGACAAGACCCTCCCTCAAGTCGTCTCCCTCCTCCC
CCTCCTCAAGCGTGGCGTCGGCATCCATCACGGTGGCCTCCTTCCCATTC
TTAAGGAAATTATCGAAATCCTCTTCCAGGAAGGATTAATTAAGTGTTTG
TTTGCCACCGAGACCTTCTCCATTGGTACGTATCCCCCCTTCTTCCCTCC
CTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTTTACTCAAGCAG
GGCGCCTGCATAGTTTCTGATGATAACATCATAACACCCTAAAGAATCAT
AAGCGTGAAACCCGAAAGACCTAAAAATACAAAATAATGACACAATTCAA
TAAACAGCCAATAACATTACCGACCAATCAATCAACAAACAAAAATGCGC
GAAATATTTGAAAAAGTTGAAAATGAATTAATTGACACACGATTCCTTTT
CCTTCTCTTTCTGCAGGTATCAACATGCCTGCCAAGACCGTTGTCTTCAC
CCAATGCACCAAATTCGACGGCAAGGACTTCCGGTGGGTCACCCCAGGGG
AATACATCCAGATGAGCGGTCGAGCCGGGCGACGAGGGAAGGACGACAGG
GGGATTGTGATCATGATGATGAACAGCAAGATGGAGCCTGACATCTGTAA
GACCATGCTCTATGGAGGTACGTTCTAGTCTACACTCCCTCCCTATTCAC
TGTAATTATTTAAATGTATTATTTATTCTATTTCTTATTCATCAAAGTTC
ATCGATTAGTTTCGTTTCTATGGTTTTTGAGTGATGAAACCCAATGCTGG
CACCAATCTGAGTGCATCGCCTCATTCGGTGCCCGATTATGAACAGCTAC
TCGGCTCCTACCGCAATTGTGAGTCTCTGACAACGACCAACACATCTACA
AATATTTTCAAAACGAGTAAATTTCTTACCTTTCTCAATGCTACACAGAG
TATCCACCTATGTTTTTAATCGTTCATTTATACATTCTTCCACATTTTTG
TTTGAATGCATGTATCCATGTATATACATCGATTCATATGTACATTTATC
TATTACGCATCCCCCAACACAGAACCGGACAAGCTCTACTCCTCCTATCA
CGTGTCCTACAACATGCTCCTTAATATGCTCAGGGTTCAAGGCGCCAACC
CCGAGTTCCTCGTCCGTTCGTCTTTTCACCAGTACCAACAGGAGTCTGCA
GCCCCCGCCCTCGAAAAAGAAGCAGCAGAGTTAGAAGAGGCTGCGAGGGA
GGTCACGATCGAGGGAGGGAAGGAGGGCGAGGCGGAAGTCGCTGAATATT
TTGCGTGGAATAATCAGTTGGAGGGAATCAAGAAGGAGATGAGAAAATAC
ACTCAGGATCCCGATGTCGTCTTGTCCTTTTTGAAGAAGGGAAGGTTGGT
CTGTGTGAAGGAGGAGGGGAAGGAAGGAGGGAGGGAGGGAGCGAAGGAGT
GGGGGTGGGGAGCTGTAGTAGGGTATAAGGCCGTAGATGTGAGCAAGGCC
AGGGCGGGCTTGCCGGGGGGGGGGGGGCGGTGGTGGGTGCAGGGAAGGTA
G

Coding sequence (CDS) from alignment at chr12:896673..902823+

>NO12G03240.1 ID=NO12G03240.1|Name=NO12G03240.1|organism=Nannochloropsis oceanica|type=CDS|length=2277bp|location=Sequence derived from alignment at chr12:896673..902823+ (Nannochloropsis oceanica)
ATGCTGTCCCCTCCCGACCTCCCCACCCAAAGACGTTGCCCTGCCCCTTA
CCATCCGTCTGTCCACACCTTACCCCCTACACACAACCACACAGAGGTAA
GCATGGATGATGGCGATTTGAACGACCTGTTTGGGGCTTTTGACGGGGAC
GACGTGGCTGAGACCGTGGAACCGATCGCGCCCCCGCCCATCTCTCCTGC
TTCTCCCACTGCTACCAAGCGCAAGTCCATCTCAACAAGTGAAGTTGCGG
TGGCCGCCAGAGAAGGAAATGGCAACCGCAACAATGATGAAGGCTACAAT
GAGAACGAGGAGGATGACGAGGCAGGCAAGGAGGGACGGAGCAAGCGTCC
GCGCAAGTCCGATGGCAACGACCCTGGTCCCTCAAAGGGTGTGCAACCCA
CCATCACCCAACACCAAGAAATCATCACTCCCGACGGCCGGCGCGTCATT
TCCTTCTCGGCCCTCCCCGCCGATTACGTCGCCCACGATTTTATGCCACC
CGCGCAGCCTGCCAAGACATATGCCTTTCCCCTCGACCCATTCCAACAAG
CCGCCATTGGCTTCATTGAAAAGGGCGAGTCCGTCCTCGTTGCTGCACAC
ACTTCCGCAGGCAAGACTGTCACGGCCGAGTACGCCATTGCCATGAGCCT
GCAGAAGAAACAACGGGTGATTTATACGTCGCCAATCAAGGCGTTATCGA
ATCAGAAGTACCGAGACATGGCCGAGGAGTTTGGGGATGTAGGCTTGATG
ACGGGCGACATCACCATTAACCCTTCCGCGACCTGCCTCATCATGACCAC
TGAAATTCTCCGCTCGATGCTTTACCGCGGGAGTGAGATCATGCGAGAGG
TGGCTTGGGTGATTTACGATGAGATTCACTACATGCGGGACAAGGACCGG
GGAGTGGTGTGGGAGGAAAGCATCATCCTCCTCCCCCACAAGGTACGCTT
CGTTTTTCTCTCGGCCACCATCCCCAACAGCCAAGAATTCGCAGGCTGGA
TCGCCACCATCCACCACCAGCCCTGTCACGTCGTTTACACCGATTACCGG
CCCGTGCCCTTGCAGCATTACATCTTTCCTTCAGGAGGGGTGGGGTTGTA
CCTGGTCGTGGACGAGAAGAGTCGGTTCCGAGAGGAAAATTTCCAAAAGG
CCATGGCGGTGTTGCAGGCAGAGGGAGGGGAGGAAGAAGGGGCAAGCAAG
AAAAAGAGTGGGGGGGGTAGGGAGGGAGGGAAGGGAGCGGGGCAGCAGAG
CGAATTGGGGAAGATCGTGCGATTGATTATGGAGAGGTCTTATGACCCTG
TGATTATTTTTTCCTTCTCTAAGAGGGAGTGTGAGGCGTATGCCCTCAAG
ATGGGGAAGCTGGATTTCAACGAGGAGGGGGAGAAAGAGCTCGTGGAGCA
GGTGTTTAACAACGCCATCGACTCCCTCTCGGAGGAGGACAAGACCCTCC
CTCAAGTCGTCTCCCTCCTCCCCCTCCTCAAGCGTGGCGTCGGCATCCAT
CACGGTGGCCTCCTTCCCATTCTTAAGGAAATTATCGAAATCCTCTTCCA
GGAAGGATTAATTAAGTGTTTGTTTGCCACCGAGACCTTCTCCATTGGTA
TCAACATGCCTGCCAAGACCGTTGTCTTCACCCAATGCACCAAATTCGAC
GGCAAGGACTTCCGGTGGGTCACCCCAGGGGAATACATCCAGATGAGCGG
TCGAGCCGGGCGACGAGGGAAGGACGACAGGGGGATTGTGATCATGATGA
TGAACAGCAAGATGGAGCCTGACATCTGTAAGACCATGCTCTATGGAGAA
CCGGACAAGCTCTACTCCTCCTATCACGTGTCCTACAACATGCTCCTTAA
TATGCTCAGGGTTCAAGGCGCCAACCCCGAGTTCCTCGTCCGTTCGTCTT
TTCACCAGTACCAACAGGAGTCTGCAGCCCCCGCCCTCGAAAAAGAAGCA
GCAGAGTTAGAAGAGGCTGCGAGGGAGGTCACGATCGAGGGAGGGAAGGA
GGGCGAGGCGGAAGTCGCTGAATATTTTGCGTGGAATAATCAGTTGGAGG
GAATCAAGAAGGAGATGAGAAAATACACTCAGGATCCCGATGTCGTCTTG
TCCTTTTTGAAGAAGGGAAGGTTGGTCTGTGTGAAGGAGGAGGGGAAGGA
AGGAGGGAGGGAGGGAGCGAAGGAGTGGGGGTGGGGAGCTGTAGTAGGGT
ATAAGGCCGTAGATGTGAGCAAGGCCAGGGCGGGCTTGCCGGGGGGGGGG
GGGCGGTGGTGGGTGCAGGGAAGGTAG

Synonyms

Publications