NO12G03220.1, NO12G03220.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G03220.1
Unique Name	NO12G03220.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4423
Alignment location	chr12:889617..894039 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:889617..894039 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G03220.1 vs.
Match: EWM25726.1 (activating transcription factor 6 [Nannochloropsis gaditana])

HSP 1 Score: 139.0 bits (349), Expect = 6.900e-29
Identity = 226/563 (40.14%), Postives = 293/563 (52.04%), Query Frame = 0

Query:   10 QDNLATIKSEIGATFTAGETENNNNHNNSNNFMRTSSSK-----KQCQRQRGALGEDSAMLEIDDEVNEDDGTSGSGITPGGNKLISNCSEG-NERSSSTSSSPPSETSTSLSAWPGHGGHRGSGESSGGSTGHGEGSTSSSGGGGSSNESTGGSSTASQAAERRKARARKMGLLQSRGERDMILSASHMQHQQHHHNPFGDD-DEDGRGGGREEDLPGSSSSSVTGEVTIMRRRKDAEDMAAAVALTKKQLRMIRNRESAALSRKRKRDQVEALELEVEALKDKNRQLKQRLARYEGLDTLDLARSAGGDVVRGSGGVGGGSGGGGGLLGVPLAYDSGGVGGGVGGLSWQQQQQQQQQQLEQQQQQQQQQQQQQQQQQQRRRQQQQQRRQQQQQQQQEEAEGQQQQQITNSMLDEADFDEFYQPLAGVLGFDPSQLPPASLSASALPPSSVSSSSSSSLHQQPINSTAISSVAEAMTNKDSGNSSSCGGGGGRGR-GGGGGGPTYARLSRSAVGYLE-PQEQ--QQQQQQQRAQQQLRRQQLLQQQQLQEQQQQQRQQQQQQ 562
            Q  L  +K EI +   A    NN+ +   +     +         + + Q  A+G D  M     +++ D  ++  G     +    +C+ G +  +SS+SS+PPSE STS+SAW G     GS  SS    G   GS++ +    +S  S G S+T+SQAAERR+ARARKMGLLQ+RGE  M+LS+S    Q+H +    DD D +G  G   +  PGS SSSVTG VT  R R+DAEDMAAAVALTKKQLRMIRNRESAALSRKRKRDQVEALELEVEALKDKNRQLKQRLARYEG+DTL+ AR AGGD+VRG+G                             GL+WQQQQ+Q+  + +QQ                           Q      EE++     Q    ML        + P +  +   PS LPP+S   S   PSS +   + +                   +K  G+ S    GG +G        PTYARLS S +G+ + PQ        Q Q  +Q+LR QQL QQ QL  +QQ+Q+QQQ Q+
Sbjct:   10 QSYLMAMKEEIESALDAAPGGNNDINTPGDKLSPPALQDCDIAISKTKPQTAAVGIDLLMRNSAQDIHPDPVSNSKGFEDRISGRTDDCAGGIHSNTSSSSSAPPSEASTSVSAWVGQEDSTGSSTSSSRQGGEDHGSSNVT----ASTTSIGASTTSSQAAERRRARARKMGLLQNRGE--MLLSSSQRHLQEHPYQIKEDDGDREGLAGLACDSPPGSCSSSVTGMVT-SRMRRDAEDMAAAVALTKKQLRMIRNRESAALSRKRKRDQVEALELEVEALKDKNRQLKQRLARYEGVDTLESARDAGGDIVRGTGAT-------------------------PAGLTWQQQQEQRIMEAQQQAGAAD---------------------SQDPNPFLEESDLDGFYQPLAGMLG-------FDPSSLNISL-PSSLPPSSARQSRPTPSSGAPPQTEA--------------GRIGGSKGPGDQS----GGRKGPFTAESPTPTYARLSASEIGFAQRPQLSMVSSPAQSQEPEQRLRGQQLQQQHQLALEQQRQQQQQVQK 493

The following BLAST results are available for this feature:

BLAST of NO12G03220.1 vs.

BLAST of NO12G03220.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25726.1	6.900e-29	40.14	activating transcription factor 6 [Nannochloropsis...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G03220	NO12G03220	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G03220.1	NO12G03220.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G03220.1.cds1	NO12G03220.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:889617..894039+
coding sequence from alignment at chr12:889617..894039+

mRNA sequence

>NO12G03220.1 ID=NO12G03220.1|Name=NO12G03220.1|organism=Nannochloropsis oceanica|type=mRNA|length=4423bp
CACGCACCATTCTCAGCCGAAGCTAGGGCGCTTGATTTGGCACACTTGAC
CTTGTCCAACCGCTCCGCGGCCCAAGCATGCACTACGGACATTAGCTTTT
TGCTCAAAGGCGCAGGTGGTTCACGAGACGGGGGCGTCGTGTGTGGCTAG
GATAGCTCAAAGACCATCCCCCATATTGCTGCCCCTTTCTCTTCTCTCTG
TTGACGTTTCCACGCGCCCGCGTTCTTCCTGGTGGTCATCGGGCATGGCC
TGGGACCCAGGCCGGCTCCACAGGAACCCAAGGCATTCGAAGCGACAATG
TGCCGCAATCCATGATCCTACCAATCAGGTCGTTGCATTTGCTTGCTAGC
CCTCACGCAATCAATAATCTCCCCCCCTTCTTCTCACAAATGTCACCATA
GGACATCGCCCGATAGCACTGCACTAGCGGCGCTACCAACCACCGCCACT
TAGCGAGACACCATCGTCTCTCTTCCTGTACCCAGCCATCAACGGGAAAA
GTGGCCCACTCTCTGTCTCCGTCTGCCCCGCCGCCTTTTCGTCCTCGTAG
AGAGTGAAGCCCCCTTCCTCCTTGGTTGTCCTGTCTTGGACACACACCAG
GCACGCGAGGCGACACACACACCCGACACCAACATCACTGCTTTTCACAC
CGCCGCCTGCTCCCTGCTGGTATGGCCGCGGCGAGGGATGTGGGTGCTCA
GGACAATCTAGCCACAATCAAGAGTGAAATTGGTGCGACTTTTACGGCAG
GAGAAACAGAGAACAACAACAACCACAACAACAGCAACAATTTCATGCGC
ACCAGCAGCTCCAAGAAACAATGCCAACGCCAACGTGGGGCCTTGGGCGA
GGACTCGGCCATGCTTGAGATCGACGACGAGGTCAACGAGGATGACGGTA
CCTCCGGCAGCGGGATAACACCAGGCGGCAACAAGCTCATCAGTAACTGC
AGCGAAGGCAACGAGCGTTCATCCTCCACCTCCTCTTCCCCACCGTCTGA
AACTTCAACTTCACTATCTGCCTGGCCTGGCCATGGTGGACACAGGGGGA
GCGGGGAGAGCAGCGGCGGGAGCACAGGGCATGGTGAGGGAAGTACCAGC
AGCAGTGGAGGAGGAGGATCTTCGAATGAGTCGACGGGAGGGAGTTCCAC
AGCGAGTCAGGCAGCGGAGAGAAGGAAAGCACGGGCACGGAAGATGGGTT
TGTTGCAAAGTAGGGGAGAAAGGGATATGATACTGAGTGCCTCGCACATG
CAGCACCAGCAGCACCACCACAACCCCTTTGGAGACGATGATGAGGATGG
ACGGGGTGGAGGGAGGGAGGAGGACTTGCCGGGGAGTAGCTCGAGCTCGG
TGACGGGGGAAGTAACGATTATGAGACGGAGGAAAGACGCGGAGGACATG
GCGGCGGCGGTTGCCCTGACGAAGAAGCAATTGAGGATGATTCGGAACAG
GGAGTCAGCGGCGTTATCAAGGAAGAGGAAGAGGGATCAGGTGGAAGCTC
TCGAGCTAGAGGTAGAGGCATTGAAGGACAAGAATAGACAGCTGAAACAG
CGATTAGCGCGGTACGAAGGGCTGGATACTCTCGACTTAGCCCGAAGTGC
GGGGGGAGACGTGGTAAGGGGTAGTGGAGGGGTTGGGGGAGGATCTGGGG
GAGGGGGGGGCTTATTAGGTGTACCTTTGGCGTATGATTCTGGAGGAGTG
GGCGGAGGAGTGGGAGGGTTGTCGTGGCAGCAACAACAGCAGCAGCAGCA
GCAACAGCTAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCGTCGGCGGCAACAACAGCAGCAACGGCGGCAG
CAGCAGCAGCAGCAGCAGCAGGAGGAGGCGGAGGGGCAGCAGCAACAGCA
GATTACAAACTCAATGCTGGATGAGGCTGATTTTGACGAGTTCTACCAGC
CACTAGCCGGCGTTTTGGGGTTTGATCCTTCCCAGCTCCCCCCCGCCTCG
CTCTCTGCCTCGGCCCTCCCTCCGTCCTCCGTTTCGTCTTCCTCTTCCTC
TTCCTTGCACCAGCAGCCAATAAATTCAACAGCAATATCATCAGTAGCTG
AAGCCATGACCAACAAGGACAGTGGCAACAGCAGCAGTTGCGGTGGCGGT
GGTGGAAGAGGGAGGGGAGGAGGAGGAGGAGGACCTACCTACGCACGATT
AAGTCGATCTGCTGTGGGATACCTCGAGCCCCAGGAGCAGCAACAGCAGC
AACAACAGCAAAGAGCTCAGCAACAGCTTCGCCGGCAGCAGCTACTACAG
CAACAGCAGCTTCAAGAACAGCAGCAGCAACAACGCCAGCAGCAGCAGCA
ACAACAGCAAAAAGAGCAACAGGAACAGCAACGACAACAGCAACAACAAC
GCCAGGAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAA
CAACCACAACCACCACCCTCCTTGTGGGACGCATCGGATCTAATGCCCCT
AATGGACTCGACCACTGACTTCTACTACGGAGGAGGAGGAGGGGAGGGGG
AGGGAGGGAAGCCAAGAGGGAGGGATACAGGACAGACTCCTCATCAAACA
CAACAATCCAGGCTCCAGCAGCCACTGCAGCTGCAACTGCAGCAGCAACT
AAAGCAGCAACTAAAGCAGCAACTGCAGCAGCAGCAGCAGCAGCAGCAGC
AACTGCAGCAGCAGCAGCAACAGGGCTTGCGACCGCTTTCGCAACTTCAG
CAGCAGCAGAGGAGGCAACAGAAGAGCCCTCCTGATCAAATAGCTACAGG
CCCCGCCTCTTCGGTTACATTTGCTGACGCTAACGCTGCTGCTGGTCAAG
CGAATCGTGTCAGGAGCAGCAGCCACAGCAGCGGTATCAGTCGGAGGAGG
GGTCATGCGGCGTCAGCAGCTGATTTGGGAGGAGGAGGAGGAGGGGTGGG
GGAGGGATCACTGCAGCACTTCGACAGTGAAGACTGGGGTATACCTACCG
AATTTCAACCGGGAGGGGGAGGAGGAGGGAGCTTGAGCCTTGGAGGAGGA
GGCGGAGGGGGAGTAGGTGGGTCTTTGATTTCGCAGCGGCTGGGCATGGC
CAGGACGGGGAGTGGAGGCGCGAGCTATCCACAACAGTTGCCTTTGGAGC
AGAGGGGGATGGAGGAAGAGGGAGAGAGGGAGGGGGAAGGGGAAGGGAGA
ACGGGTTGTAATGATGAAAGGGGGACTTTCGGGAATTGGGAGGGAGATGA
GTATAATGGAGGGGGAGAAGGGGGGGGGGTATGGGGAATCGATCGTCTTC
AACATCGTCATGGGCGAATCAAAACCCGTGGTAGAAAGTGAGGGAGAGTA
GAAGAGATGTAGAGAAGGATGGACCCAGGGAAAATGTGTGGGAGAGAGAA
AAAGAGCTTTTGAGTCATTTTTCGGTTCTTTTTTGTGGTGTGTGTATGTG
TGTGTGCATGTGAATGTGTGCGAGAGACAAAAAAGCAGCAGCAAGAAGGG
AGCCTTTTTAATCACCCGTCCCAAAGAGAGAGGCAGAGATACATGTACAT
AATCCAGCCCACTAGTCCAACCATTTAATTATTATTAGCTTATATAATAA
ATATATCATTTCCACCATTATTATTATTTCTATTATTATTACAAATCTTA
TTATATTTCAACCTTTCATCACAATCGTGACGATGACAGTGACCAAGACG
AAGAGAAAGTGCAAGTGAGAAACACATTTACTGAAAGGTAGTGCGAAGAT
ATCGATGTCGATCCAGCCATCAATTTTGACCAGTCTTTTTCATAAGCAAG
CAGGGAAAAGAAAGCAGCGGATCTTGGCCCTATTAGTTTGCTTCGTTGTC
TGCCTTTCCCTAAAGAGGAGAGATGAAGAAAAAGAAGAGGAAAAAGTGGT
CAGAGAGAGCGTTGCCCCCTCTACAATTGAACCATCCATCTAGCTAGAGC
GCAACAAGAAAAACAGAATGAAAGGCAAAAGCACCAGCAAATCGCACATA
CTTACGAAACAAGCAGAGGCAGCCACAGGAGCAGCAGCAGGGACTGCCAC
AGCAGCAATCTAAATTCGACCTGCCCTGAGGAGTCAGGTTGCAGACAACG
AAAGAGAGGGACGAGAGATGAAGAAAACAAGCGTTTTCCCCAGGGGTCAT
TATCTTTGTGAAATGGTAGGCAACGCACCAAGAAAAAAAGGCAAGAGGAT
CAAGAAGAACAAGGATATAGGAGAAGAGAAACAGGACGAATGATAAGCAA
AAAGCAAGAAAGGGGAAGAAAGGCGCAAGGGAGAGATACCCTGAGAAGAA
AAGAAGAGGGCGAACGACGTGGTGACGTTGACGTCCAGAAACAGCCAAGG
CAAAATTGATACCGCGCGTTCATGAGCATTTATCCATTTTTCCCGTCCAT
ACGATATCTTCTGTATATGTCGG

protein sequence of NO12G03220.1

>NO12G03220.1-protein ID=NO12G03220.1-protein|Name=NO12G03220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=890bp
MAAARDVGAQDNLATIKSEIGATFTAGETENNNNHNNSNNFMRTSSSKKQ
CQRQRGALGEDSAMLEIDDEVNEDDGTSGSGITPGGNKLISNCSEGNERS
SSTSSSPPSETSTSLSAWPGHGGHRGSGESSGGSTGHGEGSTSSSGGGGS
SNESTGGSSTASQAAERRKARARKMGLLQSRGERDMILSASHMQHQQHHH
NPFGDDDEDGRGGGREEDLPGSSSSSVTGEVTIMRRRKDAEDMAAAVALT
KKQLRMIRNRESAALSRKRKRDQVEALELEVEALKDKNRQLKQRLARYEG
LDTLDLARSAGGDVVRGSGGVGGGSGGGGGLLGVPLAYDSGGVGGGVGGL
SWQQQQQQQQQQLEQQQQQQQQQQQQQQQQQQRRRQQQQQRRQQQQQQQQ
EEAEGQQQQQITNSMLDEADFDEFYQPLAGVLGFDPSQLPPASLSASALP
PSSVSSSSSSSLHQQPINSTAISSVAEAMTNKDSGNSSSCGGGGGRGRGG
GGGGPTYARLSRSAVGYLEPQEQQQQQQQQRAQQQLRRQQLLQQQQLQEQ
QQQQRQQQQQQQQKEQQEQQRQQQQQRQEQQQQQQQQQQQQQQQPQPPPS
LWDASDLMPLMDSTTDFYYGGGGGEGEGGKPRGRDTGQTPHQTQQSRLQQ
PLQLQLQQQLKQQLKQQLQQQQQQQQQLQQQQQQGLRPLSQLQQQQRRQQ
KSPPDQIATGPASSVTFADANAAAGQANRVRSSSHSSGISRRRGHAASAA
DLGGGGGGVGEGSLQHFDSEDWGIPTEFQPGGGGGGSLSLGGGGGGGVGG
SLISQRLGMARTGSGGASYPQQLPLEQRGMEEEGEREGEGEGRTGCNDER
GTFGNWEGDEYNGGGEGGGVWGIDRLQHRHGRIKTRGRK*

mRNA from alignment at chr12:889617..894039+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G03220.1 ID=NO12G03220.1|Name=NO12G03220.1|organism=Nannochloropsis oceanica|type=mRNA|length=4423bp|location=Sequence derived from alignment at chr12:889617..894039+ (Nannochloropsis oceanica)
CACGCACCATTCTCAGCCGAAGCTAGGGCGCTTGATTTGGCACACTTGAC
CTTGTCCAACCGCTCCGCGGCCCAAGCATGCACTACGGACATTAGCTTTT
TGCTCAAAGGCGCAGGTGGTTCACGAGACGGGGGCGTCGTGTGTGGCTAG
GATAGCTCAAAGACCATCCCCCATATTGCTGCCCCTTTCTCTTCTCTCTG
TTGACGTTTCCACGCGCCCGCGTTCTTCCTGGTGGTCATCGGGCATGGCC
TGGGACCCAGGCCGGCTCCACAGGAACCCAAGGCATTCGAAGCGACAATG
TGCCGCAATCCATGATCCTACCAATCAGGTCGTTGCATTTGCTTGCTAGC
CCTCACGCAATCAATAATCTCCCCCCCTTCTTCTCACAAATGTCACCATA
GGACATCGCCCGATAGCACTGCACTAGCGGCGCTACCAACCACCGCCACT
TAGCGAGACACCATCGTCTCTCTTCCTGTACCCAGCCATCAACGGGAAAA
GTGGCCCACTCTCTGTCTCCGTCTGCCCCGCCGCCTTTTCGTCCTCGTAG
AGAGTGAAGCCCCCTTCCTCCTTGGTTGTCCTGTCTTGGACACACACCAG
GCACGCGAGGCGACACACACACCCGACACCAACATCACTGCTTTTCACAC
CGCCGCCTGCTCCCTGCTGGTATGGCCGCGGCGAGGGATGTGGGTGCTCA
GGACAATCTAGCCACAATCAAGAGTGAAATTGGTGCGACTTTTACGGCAG
GAGAAACAGAGAACAACAACAACCACAACAACAGCAACAATTTCATGCGC
ACCAGCAGCTCCAAGAAACAATGCCAACGCCAACGTGGGGCCTTGGGCGA
GGACTCGGCCATGCTTGAGATCGACGACGAGGTCAACGAGGATGACGGTA
CCTCCGGCAGCGGGATAACACCAGGCGGCAACAAGCTCATCAGTAACTGC
AGCGAAGGCAACGAGCGTTCATCCTCCACCTCCTCTTCCCCACCGTCTGA
AACTTCAACTTCACTATCTGCCTGGCCTGGCCATGGTGGACACAGGGGGA
GCGGGGAGAGCAGCGGCGGGAGCACAGGGCATGGTGAGGGAAGTACCAGC
AGCAGTGGAGGAGGAGGATCTTCGAATGAGTCGACGGGAGGGAGTTCCAC
AGCGAGTCAGGCAGCGGAGAGAAGGAAAGCACGGGCACGGAAGATGGGTT
TGTTGCAAAGTAGGGGAGAAAGGGATATGATACTGAGTGCCTCGCACATG
CAGCACCAGCAGCACCACCACAACCCCTTTGGAGACGATGATGAGGATGG
ACGGGGTGGAGGGAGGGAGGAGGACTTGCCGGGGAGTAGCTCGAGCTCGG
TGACGGGGGAAGTAACGATTATGAGACGGAGGAAAGACGCGGAGGACATG
GCGGCGGCGGTTGCCCTGACGAAGAAGCAATTGAGGATGATTCGGAACAG
GGAGTCAGCGGCGTTATCAAGGAAGAGGAAGAGGGATCAGGTGGAAGCTC
TCGAGCTAGAGGTAGAGGCATTGAAGGACAAGAATAGACAGCTGAAACAG
CGATTAGCGCGGTACGAAGGGCTGGATACTCTCGACTTAGCCCGAAGTGC
GGGGGGAGACGTGGTAAGGGGTAGTGGAGGGGTTGGGGGAGGATCTGGGG
GAGGGGGGGGCTTATTAGGTGTACCTTTGGCGTATGATTCTGGAGGAGTG
GGCGGAGGAGTGGGAGGGTTGTCGTGGCAGCAACAACAGCAGCAGCAGCA
GCAACAGCTAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCGTCGGCGGCAACAACAGCAGCAACGGCGGCAG
CAGCAGCAGCAGCAGCAGCAGGAGGAGGCGGAGGGGCAGCAGCAACAGCA
GATTACAAACTCAATGCTGGATGAGGCTGATTTTGACGAGTTCTACCAGC
CACTAGCCGGCGTTTTGGGGTTTGATCCTTCCCAGCTCCCCCCCGCCTCG
CTCTCTGCCTCGGCCCTCCCTCCGTCCTCCGTTTCGTCTTCCTCTTCCTC
TTCCTTGCACCAGCAGCCAATAAATTCAACAGCAATATCATCAGTAGCTG
AAGCCATGACCAACAAGGACAGTGGCAACAGCAGCAGTTGCGGTGGCGGT
GGTGGAAGAGGGAGGGGAGGAGGAGGAGGAGGACCTACCTACGCACGATT
AAGTCGATCTGCTGTGGGATACCTCGAGCCCCAGGAGCAGCAACAGCAGC
AACAACAGCAAAGAGCTCAGCAACAGCTTCGCCGGCAGCAGCTACTACAG
CAACAGCAGCTTCAAGAACAGCAGCAGCAACAACGCCAGCAGCAGCAGCA
ACAACAGCAAAAAGAGCAACAGGAACAGCAACGACAACAGCAACAACAAC
GCCAGGAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAA
CAACCACAACCACCACCCTCCTTGTGGGACGCATCGGATCTAATGCCCCT
AATGGACTCGACCACTGACTTCTACTACGGAGGAGGAGGAGGGGAGGGGG
AGGGAGGGAAGCCAAGAGGGAGGGATACAGGACAGACTCCTCATCAAACA
CAACAATCCAGGCTCCAGCAGCCACTGCAGCTGCAACTGCAGCAGCAACT
AAAGCAGCAACTAAAGCAGCAACTGCAGCAGCAGCAGCAGCAGCAGCAGC
AACTGCAGCAGCAGCAGCAACAGGGCTTGCGACCGCTTTCGCAACTTCAG
CAGCAGCAGAGGAGGCAACAGAAGAGCCCTCCTGATCAAATAGCTACAGG
CCCCGCCTCTTCGGTTACATTTGCTGACGCTAACGCTGCTGCTGGTCAAG
CGAATCGTGTCAGGAGCAGCAGCCACAGCAGCGGTATCAGTCGGAGGAGG
GGTCATGCGGCGTCAGCAGCTGATTTGGGAGGAGGAGGAGGAGGGGTGGG
GGAGGGATCACTGCAGCACTTCGACAGTGAAGACTGGGGTATACCTACCG
AATTTCAACCGGGAGGGGGAGGAGGAGGGAGCTTGAGCCTTGGAGGAGGA
GGCGGAGGGGGAGTAGGTGGGTCTTTGATTTCGCAGCGGCTGGGCATGGC
CAGGACGGGGAGTGGAGGCGCGAGCTATCCACAACAGTTGCCTTTGGAGC
AGAGGGGGATGGAGGAAGAGGGAGAGAGGGAGGGGGAAGGGGAAGGGAGA
ACGGGTTGTAATGATGAAAGGGGGACTTTCGGGAATTGGGAGGGAGATGA
GTATAATGGAGGGGGAGAAGGGGGGGGGGTATGGGGAATCGATCGTCTTC
AACATCGTCATGGGCGAATCAAAACCCGTGGTAGAAAGTGAGGGAGAGTA
GAAGAGATGTAGAGAAGGATGGACCCAGGGAAAATGTGTGGGAGAGAGAA
AAAGAGCTTTTGAGTCATTTTTCGGTTCTTTTTTGTGGTGTGTGTATGTG
TGTGTGCATGTGAATGTGTGCGAGAGACAAAAAAGCAGCAGCAAGAAGGG
AGCCTTTTTAATCACCCGTCCCAAAGAGAGAGGCAGAGATACATGTACAT
AATCCAGCCCACTAGTCCAACCATTTAATTATTATTAGCTTATATAATAA
ATATATCATTTCCACCATTATTATTATTTCTATTATTATTACAAATCTTA
TTATATTTCAACCTTTCATCACAATCGTGACGATGACAGTGACCAAGACG
AAGAGAAAGTGCAAGTGAGAAACACATTTACTGAAAGGTAGTGCGAAGAT
ATCGATGTCGATCCAGCCATCAATTTTGACCAGTCTTTTTCATAAGCAAG
CAGGGAAAAGAAAGCAGCGGATCTTGGCCCTATTAGTTTGCTTCGTTGTC
TGCCTTTCCCTAAAGAGGAGAGATGAAGAAAAAGAAGAGGAAAAAGTGGT
CAGAGAGAGCGTTGCCCCCTCTACAATTGAACCATCCATCTAGCTAGAGC
GCAACAAGAAAAACAGAATGAAAGGCAAAAGCACCAGCAAATCGCACATA
CTTACGAAACAAGCAGAGGCAGCCACAGGAGCAGCAGCAGGGACTGCCAC
AGCAGCAATCTAAATTCGACCTGCCCTGAGGAGTCAGGTTGCAGACAACG
AAAGAGAGGGACGAGAGATGAAGAAAACAAGCGTTTTCCCCAGGGGTCAT
TATCTTTGTGAAATGGTAGGCAACGCACCAAGAAAAAAAGGCAAGAGGAT
CAAGAAGAACAAGGATATAGGAGAAGAGAAACAGGACGAATGATAAGCAA
AAAGCAAGAAAGGGGAAGAAAGGCGCAAGGGAGAGATACCCTGAGAAGAA
AAGAAGAGGGCGAACGACGTGGTGACGTTGACGTCCAGAAACAGCCAAGG
CAAAATTGATACCGCGCGTTCATGAGCATTTATCCATTTTTCCCGTCCAT
ACGATATCTTCTGTATATGTCGG

Coding sequence (CDS) from alignment at chr12:889617..894039+

>NO12G03220.1 ID=NO12G03220.1|Name=NO12G03220.1|organism=Nannochloropsis oceanica|type=CDS|length=2670bp|location=Sequence derived from alignment at chr12:889617..894039+ (Nannochloropsis oceanica)
ATGGCCGCGGCGAGGGATGTGGGTGCTCAGGACAATCTAGCCACAATCAA
GAGTGAAATTGGTGCGACTTTTACGGCAGGAGAAACAGAGAACAACAACA
ACCACAACAACAGCAACAATTTCATGCGCACCAGCAGCTCCAAGAAACAA
TGCCAACGCCAACGTGGGGCCTTGGGCGAGGACTCGGCCATGCTTGAGAT
CGACGACGAGGTCAACGAGGATGACGGTACCTCCGGCAGCGGGATAACAC
CAGGCGGCAACAAGCTCATCAGTAACTGCAGCGAAGGCAACGAGCGTTCA
TCCTCCACCTCCTCTTCCCCACCGTCTGAAACTTCAACTTCACTATCTGC
CTGGCCTGGCCATGGTGGACACAGGGGGAGCGGGGAGAGCAGCGGCGGGA
GCACAGGGCATGGTGAGGGAAGTACCAGCAGCAGTGGAGGAGGAGGATCT
TCGAATGAGTCGACGGGAGGGAGTTCCACAGCGAGTCAGGCAGCGGAGAG
AAGGAAAGCACGGGCACGGAAGATGGGTTTGTTGCAAAGTAGGGGAGAAA
GGGATATGATACTGAGTGCCTCGCACATGCAGCACCAGCAGCACCACCAC
AACCCCTTTGGAGACGATGATGAGGATGGACGGGGTGGAGGGAGGGAGGA
GGACTTGCCGGGGAGTAGCTCGAGCTCGGTGACGGGGGAAGTAACGATTA
TGAGACGGAGGAAAGACGCGGAGGACATGGCGGCGGCGGTTGCCCTGACG
AAGAAGCAATTGAGGATGATTCGGAACAGGGAGTCAGCGGCGTTATCAAG
GAAGAGGAAGAGGGATCAGGTGGAAGCTCTCGAGCTAGAGGTAGAGGCAT
TGAAGGACAAGAATAGACAGCTGAAACAGCGATTAGCGCGGTACGAAGGG
CTGGATACTCTCGACTTAGCCCGAAGTGCGGGGGGAGACGTGGTAAGGGG
TAGTGGAGGGGTTGGGGGAGGATCTGGGGGAGGGGGGGGCTTATTAGGTG
TACCTTTGGCGTATGATTCTGGAGGAGTGGGCGGAGGAGTGGGAGGGTTG
TCGTGGCAGCAACAACAGCAGCAGCAGCAGCAACAGCTAGAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGTC
GGCGGCAACAACAGCAGCAACGGCGGCAGCAGCAGCAGCAGCAGCAGCAG
GAGGAGGCGGAGGGGCAGCAGCAACAGCAGATTACAAACTCAATGCTGGA
TGAGGCTGATTTTGACGAGTTCTACCAGCCACTAGCCGGCGTTTTGGGGT
TTGATCCTTCCCAGCTCCCCCCCGCCTCGCTCTCTGCCTCGGCCCTCCCT
CCGTCCTCCGTTTCGTCTTCCTCTTCCTCTTCCTTGCACCAGCAGCCAAT
AAATTCAACAGCAATATCATCAGTAGCTGAAGCCATGACCAACAAGGACA
GTGGCAACAGCAGCAGTTGCGGTGGCGGTGGTGGAAGAGGGAGGGGAGGA
GGAGGAGGAGGACCTACCTACGCACGATTAAGTCGATCTGCTGTGGGATA
CCTCGAGCCCCAGGAGCAGCAACAGCAGCAACAACAGCAAAGAGCTCAGC
AACAGCTTCGCCGGCAGCAGCTACTACAGCAACAGCAGCTTCAAGAACAG
CAGCAGCAACAACGCCAGCAGCAGCAGCAACAACAGCAAAAAGAGCAACA
GGAACAGCAACGACAACAGCAACAACAACGCCAGGAGCAGCAGCAGCAGC
AGCAGCAACAACAACAACAACAACAACAACAACCACAACCACCACCCTCC
TTGTGGGACGCATCGGATCTAATGCCCCTAATGGACTCGACCACTGACTT
CTACTACGGAGGAGGAGGAGGGGAGGGGGAGGGAGGGAAGCCAAGAGGGA
GGGATACAGGACAGACTCCTCATCAAACACAACAATCCAGGCTCCAGCAG
CCACTGCAGCTGCAACTGCAGCAGCAACTAAAGCAGCAACTAAAGCAGCA
ACTGCAGCAGCAGCAGCAGCAGCAGCAGCAACTGCAGCAGCAGCAGCAAC
AGGGCTTGCGACCGCTTTCGCAACTTCAGCAGCAGCAGAGGAGGCAACAG
AAGAGCCCTCCTGATCAAATAGCTACAGGCCCCGCCTCTTCGGTTACATT
TGCTGACGCTAACGCTGCTGCTGGTCAAGCGAATCGTGTCAGGAGCAGCA
GCCACAGCAGCGGTATCAGTCGGAGGAGGGGTCATGCGGCGTCAGCAGCT
GATTTGGGAGGAGGAGGAGGAGGGGTGGGGGAGGGATCACTGCAGCACTT
CGACAGTGAAGACTGGGGTATACCTACCGAATTTCAACCGGGAGGGGGAG
GAGGAGGGAGCTTGAGCCTTGGAGGAGGAGGCGGAGGGGGAGTAGGTGGG
TCTTTGATTTCGCAGCGGCTGGGCATGGCCAGGACGGGGAGTGGAGGCGC
GAGCTATCCACAACAGTTGCCTTTGGAGCAGAGGGGGATGGAGGAAGAGG
GAGAGAGGGAGGGGGAAGGGGAAGGGAGAACGGGTTGTAATGATGAAAGG
GGGACTTTCGGGAATTGGGAGGGAGATGAGTATAATGGAGGGGGAGAAGG
GGGGGGGGTATGGGGAATCGATCGTCTTCAACATCGTCATGGGCGAATCA
AAACCCGTGGTAGAAAGTGA

Synonyms

Publications