NO12G03120.1, NO12G03120.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO12G03120.1
Unique NameNO12G03120.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length339
Alignment locationchr12:857150..857657 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:857150..857657 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO12G03120.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03120NO12G03120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO12G03120.1NO12G03120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO12G03120.1.cds1NO12G03120.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G03120.1.cds2NO12G03120.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO12G03120.1 ID=NO12G03120.1|Name=NO12G03120.1|organism=Nannochloropsis oceanica|type=mRNA|length=339bp
ATGCATGAGGAAGCCGCTGGTGCGGTCGAGGGAGGGACAGAACGACCTCC
GAGAGGGACGAAGCGGCGGCCTAGGCAGTATCGAAAGGACCGGCCAGTTG
ATTCCGGAAGGGAAGAAGGCCCTTGTCCACGGGTATGGTCAGGTGGGTCG
GCGACTCGCCCGTGCTTGTGTGGGCCTGGGCATGCGGGCGAAGGAGGGGA
AGAGAGCGGGAAAGACAATGGAAGGGTGCAGATGATCGGGCGGGAGGCGT
GGAAAGAGGAGCTTCCGGCGACCACGGCACTATTGTTGGCGCTGCTGGGC
ACGGTGGCCATTGAGACACTGATCGAAGAATCGAAATAA
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protein sequence of NO12G03120.1

>NO12G03120.1-protein ID=NO12G03120.1-protein|Name=NO12G03120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=113bp
MHEEAAGAVEGGTERPPRGTKRRPRQYRKDRPVDSGREEGPCPRVWSGGS
ATRPCLCGPGHAGEGGEESGKDNGRVQMIGREAWKEELPATTALLLALLG
TVAIETLIEESK*
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mRNA from alignment at chr12:857150..857657-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO12G03120.1 ID=NO12G03120.1|Name=NO12G03120.1|organism=Nannochloropsis oceanica|type=mRNA|length=508bp|location=Sequence derived from alignment at chr12:857150..857657- (Nannochloropsis oceanica)
ATGCATGAGGAAGCCGCTGGTGCGGTCGAGGGAGGGACAGAACGACCTCC
GAGAGGGACGAAGCGGCGGCCTAGGCAGTATCGAAAGGACCGGTAAAGGA
AAAAGGGAGGAATCGGATGTGGACGTGGTCGAGGCCTTCAGAAGTGAAGA
CCAAATCGCGGGAATGCGACGAGGGAGAAGACTGACATGCCTTTCCTGCC
ATACTCTCCTTTCCCTCCCTCATGCCCTCACTCTGTCTCGCGCTTTCGTG
CCGGCCCTCAGGCCAGTTGATTCCGGAAGGGAAGAAGGCCCTTGTCCACG
GGTATGGTCAGGTGGGTCGGCGACTCGCCCGTGCTTGTGTGGGCCTGGGC
ATGCGGGCGAAGGAGGGGAAGAGAGCGGGAAAGACAATGGAAGGGTGCAG
ATGATCGGGCGGGAGGCGTGGAAAGAGGAGCTTCCGGCGACCACGGCACT
ATTGTTGGCGCTGCTGGGCACGGTGGCCATTGAGACACTGATCGAAGAAT
CGAAATAA
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Coding sequence (CDS) from alignment at chr12:857150..857657-

>NO12G03120.1 ID=NO12G03120.1|Name=NO12G03120.1|organism=Nannochloropsis oceanica|type=CDS|length=339bp|location=Sequence derived from alignment at chr12:857150..857657- (Nannochloropsis oceanica)
ATGCATGAGGAAGCCGCTGGTGCGGTCGAGGGAGGGACAGAACGACCTCC
GAGAGGGACGAAGCGGCGGCCTAGGCAGTATCGAAAGGACCGGCCAGTTG
ATTCCGGAAGGGAAGAAGGCCCTTGTCCACGGGTATGGTCAGGTGGGTCG
GCGACTCGCCCGTGCTTGTGTGGGCCTGGGCATGCGGGCGAAGGAGGGGA
AGAGAGCGGGAAAGACAATGGAAGGGTGCAGATGATCGGGCGGGAGGCGT
GGAAAGAGGAGCTTCCGGCGACCACGGCACTATTGTTGGCGCTGCTGGGC
ACGGTGGCCATTGAGACACTGATCGAAGAATCGAAATAA
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Synonyms
Publications