NO12G02770.1, NO12G02770.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO12G02770.1
Unique NameNO12G02770.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3391
Alignment locationchr12:773581..777170 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:773581..777170 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO12G02770.1 vs.
Match: EWM25750.1 (rhodanese domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1140.2 bits (2948), Expect = 0.000e+0
Identity = 607/925 (65.62%), Postives = 705/925 (76.22%), Query Frame = 0
Query:   18 RSLLQLSPQSLCLASFHFPPHI---AAMHL-VDRKQHGSIFMRGVSLYCLMGCVRAFHFHHALPSPSSATSKWLYPSSFHRNQYQQRPFWTMSASTNTDTSTNIHT--KSNVPSGSSSTGVDSARAGYYRTFDAAGTPDVDPLLRSQVREKLLSKRRERFSKEKGEEVLQQLSDSRVVPVRVLVDVDLRQTLRLTRREKKTRLFIPVEAMSKLSVFLGYIYQAFPVEGMPHNIVVKIRRGESTATRAGGGEVNTEAAVQQKDDESNNTSESSSNISCEETEDLFITLVTDADLQQAFSEAQKEGQMPQLYIKTDKTAAAAMVPSYLRDMPDPRLAEAMQMVSFYNFFTPPIADELGLTQLAKRLRAVWEPFGALGRVYVASEGINAQMAVPATVFQNFAEACTSLSELKNVFLNRDREVRMEEYMEEPAFDSLHIRVREQVVADGGMEEDRGEGRKGKEFDWQDCGVGMSPSEWHEKVDDPKVLVLDCRNEFESEVGRFVSAEPLNTSFFRESWDVLKRRLEDVPKETEILTYCTGGIRCIKVGAYLKQELGFENVARLEGGIVSYARHLRGEQVVDPASQTTSTVKTAAVAVGGVIPGSKFKGINYVFDNRLGERITEDVLARCDQCGTPSDNYVNCANPNCHVRFLQCSSCSASHQQCCSRGCIQALQDLEHQPPKGGYPAPPRSVYPPGVEEACPLLPLSEGKRRSHKRVWLQPGPFQNVRLNRGFDVAMDAFMEAEAGTLLESDLLQRLSQETEGVFPEGAHMLSGHSQGRLLATLTKAIGARSALEIGTFTGYATLCMAEGLAGAATVTAAAVGADAAVGADTSGGLRPKVVTCEIDHRAAQIAKKYFDEAAATPAAGTAPAAEIEMHREPAMDLLQRLAATPEGKGRPSFDVIFLDGDKKRYIEYYDFVLEHKLLSGGG 937
            R+ L L P SL  +S H  P I    AMHL VDR    +  MRG+    L+GCV+A+    A P P+     W       +     RP     +      S+N H+  +  + SGSS TG+DSARAGY+RTF+AAGTPD+DPL+RSQVREKLL+KRRERFSKEKGE VL++LS SRV+PVRVLVDVDLRQTLRLTRREKK RLFIP+E+ + LS+FL  IYQ+FPVEGMPHNIVV++RR E +             AV ++D E     + +      +T+ L +TL +D DL +A +EAQKEG   Q+YI+TDK+AAAAMVP+YLRDMPDPR + +MQMVSFY FF PP+  E  L  LAK+LRAVWEPFGALGRVYVASEGINAQMAVPATVF +FA AC SL EL  V+LN+DREV M +Y +EPAFD+LHIR+REQVVADGG+  +R       EFDW DCG GM P EWHEKVDD  VLVLDCRNEFESEVGRFV+AEPLNTSFFRESWDVLK RL DVPK+  ILTYCTGGIRCIKVGAYLKQELGF+NVARLEGGIVSYARHLRG Q     +++ S   T   ++ GVIP SKFKGINYVFDNRLGERITEDVL+RCDQCG PSDNYVNCANPNCHVRFLQC SC  SH  CCSRGCIQA Q++E Q PKGGYPAP +SVYPP VEEA PLLPLSEG+R S KRVWLQPGPFQN RLNRGFD AMD FM AE GTL ESDLLQRL++ETE VFP GAHMLS HSQGRLLA LTK+IGAR+ALEIGTFTGYATLC+AEG++ A       +G++AA   D+     PKV+TCEID RAA+IA+KY DEA ++ A      A++++++EPA++LLQRLAA P GK RP FDVIF+DGDKKRY EYYDF+LEH LL+GGG
Sbjct:   68 RASLPLRPLSLGRSSAH--PWILQPVAMHLFVDRNTILATLMRGIGFCWLVGCVQAYSLKRAPPRPAYHAQPWP-----RQRGQPLRPLLLSFSQGGVWMSSNAHSYPRGTMGSGSSVTGIDSARAGYHRTFEAAGTPDIDPLVRSQVREKLLNKRRERFSKEKGEAVLEELSASRVLPVRVLVDVDLRQTLRLTRREKKARLFIPLESTASLSLFLDQIYQSFPVEGMPHNIVVRVRRKEGSG------------AVGEEDGEHGPGRDHA------DTDALHVTLKSDEDLARALAEAQKEGMSLQVYIRTDKSAAAAMVPTYLRDMPDPRASPSMQMVSFYRFFAPPLESEEALDLLAKKLRAVWEPFGALGRVYVASEGINAQMAVPATVFPHFARACASLEELAGVYLNKDREVDMGQYAQEPAFDALHIRIREQVVADGGLSAER-------EFDWGDCGRGMHPEEWHEKVDDSNVLVLDCRNEFESEVGRFVTAEPLNTSFFRESWDVLKTRLADVPKDKPILTYCTGGIRCIKVGAYLKQELGFQNVARLEGGIVSYARHLRGTQGAGQDTRSESEA-TVDASMAGVIPSSKFKGINYVFDNRLGERITEDVLSRCDQCGAPSDNYVNCANPNCHVRFLQCESCGQSHHGCCSRGCIQARQEMELQSPKGGYPAPAKSVYPPCVEEAFPLLPLSEGRRESKKRVWLQPGPFQNARLNRGFDAAMDDFMAAETGTLAESDLLQRLTRETESVFPGGAHMLSAHSQGRLLAALTKSIGARTALEIGTFTGYATLCLAEGVSMA---RGRGLGSEAA--RDSGRAALPKVMTCEIDSRAAKIAQKYIDEAISSKAIPGLGVADVQIYQEPAIELLQRLAALPPGKERPQFDVIFVDGDKKRYQEYYDFILEHNLLAGGG 954          
The following BLAST results are available for this feature:
BLAST of NO12G02770.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM25750.10.000e+065.62rhodanese domain protein [Nannochloropsis gaditana... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02770NO12G02770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO12G02770.1NO12G02770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO12G02770.1.cds1NO12G02770.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G02770.1.cds2NO12G02770.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO12G02770.1 ID=NO12G02770.1|Name=NO12G02770.1|organism=Nannochloropsis oceanica|type=mRNA|length=3391bp
ACACAGCTGAACACTGAACTGCGTATAAAAGTCGCAGGTCGAACATCAAG
TTAACCTGCCTCCTTCGCCTGCATCCGTGCACACCCCATCACCGGTCGCA
CAGTGGGCAAGGCTGCATGCTCTCGTCGTCCCGGTGTGGATCTGCCAAAA
CTGTGTATCGTCGTCGTAGATCACTGCTTCAGCTTTCTCCTCAAAGCCTC
TGTCTAGCCAGCTTTCATTTCCCACCCCACATCGCCGCCATGCATTTGGT
GGACAGAAAGCAACACGGAAGTATTTTCATGCGCGGTGTCAGTCTCTACT
GTCTAATGGGATGTGTCCGCGCCTTCCACTTCCACCACGCTCTTCCTTCT
CCCTCTTCCGCTACCAGCAAATGGCTCTACCCCTCCTCCTTCCACCGCAA
CCAATACCAGCAACGTCCTTTCTGGACTATGAGCGCCAGTACCAACACGG
ATACCAGCACAAACATTCACACCAAAAGCAATGTTCCAAGTGGAAGCAGC
TCGACGGGGGTTGACAGCGCGCGGGCTGGATATTATCGGACATTTGACGC
GGCTGGTACCCCAGACGTTGACCCGTTGCTTCGGAGCCAAGTCCGCGAGA
AGTTGCTGAGCAAGCGGAGGGAACGTTTTAGTAAGGAAAAAGGGGAAGAG
GTTTTGCAGCAGTTGAGTGATAGTCGGGTGGTGCCTGTGAGAGTCTTGGT
CGACGTAGATTTACGGCAGACCTTGAGGCTGACAAGGCGGGAGAAGAAAA
CTCGATTGTTCATCCCGGTGGAAGCAATGAGTAAATTGAGTGTCTTTCTG
GGCTATATATATCAAGCATTTCCTGTAGAGGGCATGCCGCACAACATTGT
GGTTAAGATCCGAAGGGGGGAAAGCACTGCCACTCGGGCAGGGGGAGGAG
AGGTGAATACCGAAGCTGCTGTTCAACAGAAAGATGATGAGAGCAACAAC
ACCAGCGAGAGTAGCAGCAACATCAGCTGTGAGGAAACTGAAGATTTGTT
CATCACCTTGGTGACTGATGCGGACCTTCAACAAGCTTTTTCGGAGGCTC
AAAAAGAAGGCCAAATGCCACAGCTTTACATAAAAACGGACAAGACAGCC
GCTGCCGCCATGGTTCCCTCCTACCTCCGCGACATGCCCGACCCTAGGCT
CGCCGAAGCGATGCAAATGGTGTCTTTCTACAATTTTTTCACGCCGCCGA
TCGCCGATGAATTGGGTTTAACCCAACTGGCGAAAAGGCTCAGGGCGGTC
TGGGAGCCATTCGGGGCGTTGGGGAGAGTGTACGTTGCGAGTGAAGGAAT
CAATGCCCAAATGGCAGTCCCGGCGACCGTTTTCCAGAATTTTGCCGAGG
CTTGCACGTCATTGAGTGAGTTAAAGAATGTCTTTTTGAATAGGGACAGG
GAAGTGAGGATGGAGGAGTATATGGAGGAGCCAGCTTTTGATTCACTGCA
TATCAGAGTCCGCGAACAGGTGGTGGCGGATGGAGGCATGGAGGAAGACA
GGGGGGAGGGGAGAAAGGGAAAAGAATTTGATTGGCAGGATTGTGGAGTT
GGGATGAGCCCGAGTGAGTGGCACGAGAAGGTGGATGACCCCAAGGTGCT
GGTCCTCGACTGTAGAAATGAATTTGAGTCGGAGGTCGGGCGATTTGTGT
CAGCGGAGCCGTTGAACACGAGTTTCTTCCGGGAGTCTTGGGACGTCTTA
AAAAGGAGATTAGAAGACGTGCCGAAGGAGACAGAGATTCTGACGTACTG
CACGGGGGGAATTCGGTGTATTAAAGTGGGGGCCTACCTGAAGCAGGAGC
TAGGGTTTGAAAACGTCGCGAGGTTAGAAGGAGGGATTGTCTCGTATGCC
AGGCACTTACGGGGGGAGCAAGTTGTTGATCCGGCTTCACAAACTACATC
AACTGTCAAAACGGCAGCGGTAGCGGTGGGAGGGGTGATTCCTGGAAGTA
AGTTCAAGGGGATTAACTATGTATTTGATAATCGACTCGGGGAGAGGATA
ACGGAAGATGTTCTCGCACGATGCGACCAATGTGGCACCCCTTCGGACAA
CTACGTGAATTGCGCCAACCCCAATTGCCATGTGCGTTTCCTCCAATGCT
CCTCTTGCAGCGCATCGCACCAGCAATGCTGCTCCCGTGGGTGCATCCAA
GCTTTGCAAGACCTCGAGCATCAACCCCCCAAAGGCGGCTATCCCGCCCC
TCCCCGCAGTGTTTACCCTCCCGGCGTCGAAGAAGCTTGCCCGCTTCTAC
CTCTGTCGGAGGGGAAGCGAAGGTCCCATAAGAGGGTTTGGCTCCAGCCG
GGGCCCTTCCAGAATGTTCGTTTAAATAGAGGCTTTGACGTGGCCATGGA
TGCCTTTATGGAAGCTGAAGCAGGGACGTTGCTTGAGTCCGATTTGCTTC
AACGCTTGTCGCAGGAGACAGAGGGCGTGTTTCCGGAAGGAGCACACATG
TTGTCCGGGCATAGTCAGGGGAGACTATTGGCGACGTTGACGAAAGCGAT
CGGCGCGAGATCCGCGTTGGAGATTGGCACATTTACAGGGTATGCTACCT
TGTGCATGGCTGAGGGTTTGGCAGGCGCTGCTACTGTTACTGCTGCCGCT
GTTGGTGCTGATGCCGCTGTTGGTGCTGATACTAGTGGGGGTTTGCGCCC
CAAGGTAGTAACGTGTGAGATTGATCATCGTGCGGCCCAGATTGCTAAAA
AGTATTTTGATGAGGCTGCTGCTACTCCTGCTGCAGGTACTGCTCCTGCT
GCTGAAATTGAGATGCACCGAGAGCCGGCCATGGATTTACTGCAGCGGTT
GGCGGCAACGCCTGAAGGAAAGGGAAGACCGAGTTTTGATGTGATTTTCT
TAGATGGCGATAAAAAGAGATATATCGAGTACTATGACTTTGTGTTGGAA
CACAAGCTTCTGTCCGGGGGGGGATAATGATAGCGGACAATGTGTTGTGG
AAAGGGTTGGTGCCTGAGCTAGGACGACGGATTGGGAAGGGCGGAGAGAA
GGCGGTGTTGCCAGTGGAAGAATTTGAGGCCCTAGGATTTAGTAGAAGGC
AGGTGATGTTGACCAAGGTGTTGCATGATTTCAACATGCACGTCCGCGCG
GACATGCGGACGGAGCAGGCATTTTTGCCCATAAGAGATGGGCTTTTAAT
TATGCGATGGAAGGGATTTGAACGTACCATGCTATCTATGGCGGCTGGGG
CTCCTCCTGTGTCTGGGAGAAGGTGAGATGTGTCAGAGTGGGAGACAATT
TTGATGGGGAAAAGGGAATGGAACAATTTTAAAATGTGTGACTGCGTGCG
TGTGTGGGAGGAGGCACCAATAGTGTGCGAAAAAGACGTTGATAGTCCGA
CAACAGCACTAAAGAACAAACAGTGCATGACTTTGTGAAAA
back to top

protein sequence of NO12G02770.1

>NO12G02770.1-protein ID=NO12G02770.1-protein|Name=NO12G02770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=937bp
MLSSSRCGSAKTVYRRRRSLLQLSPQSLCLASFHFPPHIAAMHLVDRKQH
GSIFMRGVSLYCLMGCVRAFHFHHALPSPSSATSKWLYPSSFHRNQYQQR
PFWTMSASTNTDTSTNIHTKSNVPSGSSSTGVDSARAGYYRTFDAAGTPD
VDPLLRSQVREKLLSKRRERFSKEKGEEVLQQLSDSRVVPVRVLVDVDLR
QTLRLTRREKKTRLFIPVEAMSKLSVFLGYIYQAFPVEGMPHNIVVKIRR
GESTATRAGGGEVNTEAAVQQKDDESNNTSESSSNISCEETEDLFITLVT
DADLQQAFSEAQKEGQMPQLYIKTDKTAAAAMVPSYLRDMPDPRLAEAMQ
MVSFYNFFTPPIADELGLTQLAKRLRAVWEPFGALGRVYVASEGINAQMA
VPATVFQNFAEACTSLSELKNVFLNRDREVRMEEYMEEPAFDSLHIRVRE
QVVADGGMEEDRGEGRKGKEFDWQDCGVGMSPSEWHEKVDDPKVLVLDCR
NEFESEVGRFVSAEPLNTSFFRESWDVLKRRLEDVPKETEILTYCTGGIR
CIKVGAYLKQELGFENVARLEGGIVSYARHLRGEQVVDPASQTTSTVKTA
AVAVGGVIPGSKFKGINYVFDNRLGERITEDVLARCDQCGTPSDNYVNCA
NPNCHVRFLQCSSCSASHQQCCSRGCIQALQDLEHQPPKGGYPAPPRSVY
PPGVEEACPLLPLSEGKRRSHKRVWLQPGPFQNVRLNRGFDVAMDAFMEA
EAGTLLESDLLQRLSQETEGVFPEGAHMLSGHSQGRLLATLTKAIGARSA
LEIGTFTGYATLCMAEGLAGAATVTAAAVGADAAVGADTSGGLRPKVVTC
EIDHRAAQIAKKYFDEAAATPAAGTAPAAEIEMHREPAMDLLQRLAATPE
GKGRPSFDVIFLDGDKKRYIEYYDFVLEHKLLSGGG*
back to top

mRNA from alignment at chr12:773581..777170-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO12G02770.1 ID=NO12G02770.1|Name=NO12G02770.1|organism=Nannochloropsis oceanica|type=mRNA|length=3590bp|location=Sequence derived from alignment at chr12:773581..777170- (Nannochloropsis oceanica)
ACACAGCTGAACACTGAACTGCGTATAAAAGTCGCAGGTCGAACATCAAG TTAACCTGCCTCCTTCGCCTGCATCCGTGCACACCCCATCACCGGTCGCA CAGTGGGCAAGGCTGCATGCTCTCGTCGTCCCGGTGTGGATCTGCCAAAA CTGTGTATCGTCGTCGTAGATCACTGCTTCAGCTTTCTCCTCAAAGCCTC TGTCTAGCCAGCTTTCATTTCCCACCCCACATCGCCGCCATGCATTTGGT GGACAGGTAAGTGTATGTCCTGCATTATGAAAGGTTTCTCTGAGTAACTT TCATCTAAGACCTATATTTCGTCCTGCTCTTTCAACTGGTAGTCCAGCCA CATTAAATTTGCCTTGTTTCTTGGCAGGAATTTACCCATCTTTACCGTAA ATCAAATAGATAGCCAAAACCAACGATCTATTCACCATCTCTGCAATCCA CACAGAAAGCAACACGGAAGTATTTTCATGCGCGGTGTCAGTCTCTACTG TCTAATGGGATGTGTCCGCGCCTTCCACTTCCACCACGCTCTTCCTTCTC CCTCTTCCGCTACCAGCAAATGGCTCTACCCCTCCTCCTTCCACCGCAAC CAATACCAGCAACGTCCTTTCTGGACTATGAGCGCCAGTACCAACACGGA TACCAGCACAAACATTCACACCAAAAGCAATGTTCCAAGTGGAAGCAGCT CGACGGGGGTTGACAGCGCGCGGGCTGGATATTATCGGACATTTGACGCG GCTGGTACCCCAGACGTTGACCCGTTGCTTCGGAGCCAAGTCCGCGAGAA GTTGCTGAGCAAGCGGAGGGAACGTTTTAGTAAGGAAAAAGGGGAAGAGG TTTTGCAGCAGTTGAGTGATAGTCGGGTGGTGCCTGTGAGAGTCTTGGTC GACGTAGATTTACGGCAGACCTTGAGGCTGACAAGGCGGGAGAAGAAAAC TCGATTGTTCATCCCGGTGGAAGCAATGAGTAAATTGAGTGTCTTTCTGG GCTATATATATCAAGCATTTCCTGTAGAGGGCATGCCGCACAACATTGTG GTTAAGATCCGAAGGGGGGAAAGCACTGCCACTCGGGCAGGGGGAGGAGA GGTGAATACCGAAGCTGCTGTTCAACAGAAAGATGATGAGAGCAACAACA CCAGCGAGAGTAGCAGCAACATCAGCTGTGAGGAAACTGAAGATTTGTTC ATCACCTTGGTGACTGATGCGGACCTTCAACAAGCTTTTTCGGAGGCTCA AAAAGAAGGCCAAATGCCACAGCTTTACATAAAAACGGACAAGACAGCCG CTGCCGCCATGGTTCCCTCCTACCTCCGCGACATGCCCGACCCTAGGCTC GCCGAAGCGATGCAAATGGTGTCTTTCTACAATTTTTTCACGCCGCCGAT CGCCGATGAATTGGGTTTAACCCAACTGGCGAAAAGGCTCAGGGCGGTCT GGGAGCCATTCGGGGCGTTGGGGAGAGTGTACGTTGCGAGTGAAGGAATC AATGCCCAAATGGCAGTCCCGGCGACCGTTTTCCAGAATTTTGCCGAGGC TTGCACGTCATTGAGTGAGTTAAAGAATGTCTTTTTGAATAGGGACAGGG AAGTGAGGATGGAGGAGTATATGGAGGAGCCAGCTTTTGATTCACTGCAT ATCAGAGTCCGCGAACAGGTGGTGGCGGATGGAGGCATGGAGGAAGACAG GGGGGAGGGGAGAAAGGGAAAAGAATTTGATTGGCAGGATTGTGGAGTTG GGATGAGCCCGAGTGAGTGGCACGAGAAGGTGGATGACCCCAAGGTGCTG GTCCTCGACTGTAGAAATGAATTTGAGTCGGAGGTCGGGCGATTTGTGTC AGCGGAGCCGTTGAACACGAGTTTCTTCCGGGAGTCTTGGGACGTCTTAA AAAGGAGATTAGAAGACGTGCCGAAGGAGACAGAGATTCTGACGTACTGC ACGGGGGGAATTCGGTGTATTAAAGTGGGGGCCTACCTGAAGCAGGAGCT AGGGTTTGAAAACGTCGCGAGGTTAGAAGGAGGGATTGTCTCGTATGCCA GGCACTTACGGGGGGAGCAAGTTGTTGATCCGGCTTCACAAACTACATCA ACTGTCAAAACGGCAGCGGTAGCGGTGGGAGGGGTGATTCCTGGAAGTAA GTTCAAGGGGATTAACTATGTATTTGATAATCGACTCGGGGAGAGGATAA CGGAAGATGTTCTCGCACGATGCGACCAATGTGGCACCCCTTCGGACAAC TACGTGAATTGCGCCAACCCCAATTGCCATGTGCGTTTCCTCCAATGCTC CTCTTGCAGCGCATCGCACCAGCAATGCTGCTCCCGTGGGTGCATCCAAG CTTTGCAAGACCTCGAGCATCAACCCCCCAAAGGCGGCTATCCCGCCCCT CCCCGCAGTGTTTACCCTCCCGGCGTCGAAGAAGCTTGCCCGCTTCTACC TCTGTCGGAGGGGAAGCGAAGGTCCCATAAGAGGGTTTGGCTCCAGCCGG GGCCCTTCCAGAATGTTCGTTTAAATAGAGGCTTTGACGTGGCCATGGAT GCCTTTATGGAAGCTGAAGCAGGGACGTTGCTTGAGTCCGATTTGCTTCA ACGCTTGTCGCAGGAGACAGAGGGCGTGTTTCCGGAAGGAGCACACATGT TGTCCGGGCATAGTCAGGGGAGACTATTGGCGACGTTGACGAAAGCGATC GGCGCGAGATCCGCGTTGGAGATTGGCACATTTACAGGGTATGCTACCTT GTGCATGGCTGAGGGTTTGGCAGGCGCTGCTACTGTTACTGCTGCCGCTG TTGGTGCTGATGCCGCTGTTGGTGCTGATACTAGTGGGGGTTTGCGCCCC AAGGTAGTAACGTGTGAGATTGATCATCGTGCGGCCCAGATTGCTAAAAA GTATTTTGATGAGGCTGCTGCTACTCCTGCTGCAGGTACTGCTCCTGCTG CTGAAATTGAGATGCACCGAGAGCCGGCCATGGATTTACTGCAGCGGTTG GCGGCAACGCCTGAAGGAAAGGGAAGACCGAGTTTTGATGTGATTTTCTT AGATGGCGATAAAAAGAGATATATCGAGTACTATGACTTTGTGTTGGAAC ACAAGCTTCTGTCCGGGGGGGGATAATGATAGCGGACAATGTGTTGTGGA AAGGGTTGGTGCCTGAGCTAGGACGACGGATTGGGAAGGGCGGAGAGAAG GCGGTGTTGCCAGTGGAAGAATTTGAGGCCCTAGGATTTAGTAGAAGGCA GGTGATGTTGACCAAGGTGTTGCATGATTTCAACATGCACGTCCGCGCGG ACATGCGGACGGAGCAGGCATTTTTGCCCATAAGAGATGGGCTTTTAATT ATGCGATGGAAGGGATTTGAACGTACCATGCTATCTATGGCGGCTGGGGC TCCTCCTGTGTCTGGGAGAAGGTGAGATGTGTCAGAGTGGGAGACAATTT TGATGGGGAAAAGGGAATGGAACAATTTTAAAATGTGTGACTGCGTGCGT GTGTGGGAGGAGGCACCAATAGTGTGCGAAAAAGACGTTGATAGTCCGAC AACAGCACTAAAGAACAAACAGTGCATGACTTTGTGAAAA
back to top

Coding sequence (CDS) from alignment at chr12:773581..777170-

>NO12G02770.1 ID=NO12G02770.1|Name=NO12G02770.1|organism=Nannochloropsis oceanica|type=CDS|length=2811bp|location=Sequence derived from alignment at chr12:773581..777170- (Nannochloropsis oceanica)
ATGCTCTCGTCGTCCCGGTGTGGATCTGCCAAAACTGTGTATCGTCGTCG
TAGATCACTGCTTCAGCTTTCTCCTCAAAGCCTCTGTCTAGCCAGCTTTC
ATTTCCCACCCCACATCGCCGCCATGCATTTGGTGGACAGAAAGCAACAC
GGAAGTATTTTCATGCGCGGTGTCAGTCTCTACTGTCTAATGGGATGTGT
CCGCGCCTTCCACTTCCACCACGCTCTTCCTTCTCCCTCTTCCGCTACCA
GCAAATGGCTCTACCCCTCCTCCTTCCACCGCAACCAATACCAGCAACGT
CCTTTCTGGACTATGAGCGCCAGTACCAACACGGATACCAGCACAAACAT
TCACACCAAAAGCAATGTTCCAAGTGGAAGCAGCTCGACGGGGGTTGACA
GCGCGCGGGCTGGATATTATCGGACATTTGACGCGGCTGGTACCCCAGAC
GTTGACCCGTTGCTTCGGAGCCAAGTCCGCGAGAAGTTGCTGAGCAAGCG
GAGGGAACGTTTTAGTAAGGAAAAAGGGGAAGAGGTTTTGCAGCAGTTGA
GTGATAGTCGGGTGGTGCCTGTGAGAGTCTTGGTCGACGTAGATTTACGG
CAGACCTTGAGGCTGACAAGGCGGGAGAAGAAAACTCGATTGTTCATCCC
GGTGGAAGCAATGAGTAAATTGAGTGTCTTTCTGGGCTATATATATCAAG
CATTTCCTGTAGAGGGCATGCCGCACAACATTGTGGTTAAGATCCGAAGG
GGGGAAAGCACTGCCACTCGGGCAGGGGGAGGAGAGGTGAATACCGAAGC
TGCTGTTCAACAGAAAGATGATGAGAGCAACAACACCAGCGAGAGTAGCA
GCAACATCAGCTGTGAGGAAACTGAAGATTTGTTCATCACCTTGGTGACT
GATGCGGACCTTCAACAAGCTTTTTCGGAGGCTCAAAAAGAAGGCCAAAT
GCCACAGCTTTACATAAAAACGGACAAGACAGCCGCTGCCGCCATGGTTC
CCTCCTACCTCCGCGACATGCCCGACCCTAGGCTCGCCGAAGCGATGCAA
ATGGTGTCTTTCTACAATTTTTTCACGCCGCCGATCGCCGATGAATTGGG
TTTAACCCAACTGGCGAAAAGGCTCAGGGCGGTCTGGGAGCCATTCGGGG
CGTTGGGGAGAGTGTACGTTGCGAGTGAAGGAATCAATGCCCAAATGGCA
GTCCCGGCGACCGTTTTCCAGAATTTTGCCGAGGCTTGCACGTCATTGAG
TGAGTTAAAGAATGTCTTTTTGAATAGGGACAGGGAAGTGAGGATGGAGG
AGTATATGGAGGAGCCAGCTTTTGATTCACTGCATATCAGAGTCCGCGAA
CAGGTGGTGGCGGATGGAGGCATGGAGGAAGACAGGGGGGAGGGGAGAAA
GGGAAAAGAATTTGATTGGCAGGATTGTGGAGTTGGGATGAGCCCGAGTG
AGTGGCACGAGAAGGTGGATGACCCCAAGGTGCTGGTCCTCGACTGTAGA
AATGAATTTGAGTCGGAGGTCGGGCGATTTGTGTCAGCGGAGCCGTTGAA
CACGAGTTTCTTCCGGGAGTCTTGGGACGTCTTAAAAAGGAGATTAGAAG
ACGTGCCGAAGGAGACAGAGATTCTGACGTACTGCACGGGGGGAATTCGG
TGTATTAAAGTGGGGGCCTACCTGAAGCAGGAGCTAGGGTTTGAAAACGT
CGCGAGGTTAGAAGGAGGGATTGTCTCGTATGCCAGGCACTTACGGGGGG
AGCAAGTTGTTGATCCGGCTTCACAAACTACATCAACTGTCAAAACGGCA
GCGGTAGCGGTGGGAGGGGTGATTCCTGGAAGTAAGTTCAAGGGGATTAA
CTATGTATTTGATAATCGACTCGGGGAGAGGATAACGGAAGATGTTCTCG
CACGATGCGACCAATGTGGCACCCCTTCGGACAACTACGTGAATTGCGCC
AACCCCAATTGCCATGTGCGTTTCCTCCAATGCTCCTCTTGCAGCGCATC
GCACCAGCAATGCTGCTCCCGTGGGTGCATCCAAGCTTTGCAAGACCTCG
AGCATCAACCCCCCAAAGGCGGCTATCCCGCCCCTCCCCGCAGTGTTTAC
CCTCCCGGCGTCGAAGAAGCTTGCCCGCTTCTACCTCTGTCGGAGGGGAA
GCGAAGGTCCCATAAGAGGGTTTGGCTCCAGCCGGGGCCCTTCCAGAATG
TTCGTTTAAATAGAGGCTTTGACGTGGCCATGGATGCCTTTATGGAAGCT
GAAGCAGGGACGTTGCTTGAGTCCGATTTGCTTCAACGCTTGTCGCAGGA
GACAGAGGGCGTGTTTCCGGAAGGAGCACACATGTTGTCCGGGCATAGTC
AGGGGAGACTATTGGCGACGTTGACGAAAGCGATCGGCGCGAGATCCGCG
TTGGAGATTGGCACATTTACAGGGTATGCTACCTTGTGCATGGCTGAGGG
TTTGGCAGGCGCTGCTACTGTTACTGCTGCCGCTGTTGGTGCTGATGCCG
CTGTTGGTGCTGATACTAGTGGGGGTTTGCGCCCCAAGGTAGTAACGTGT
GAGATTGATCATCGTGCGGCCCAGATTGCTAAAAAGTATTTTGATGAGGC
TGCTGCTACTCCTGCTGCAGGTACTGCTCCTGCTGCTGAAATTGAGATGC
ACCGAGAGCCGGCCATGGATTTACTGCAGCGGTTGGCGGCAACGCCTGAA
GGAAAGGGAAGACCGAGTTTTGATGTGATTTTCTTAGATGGCGATAAAAA
GAGATATATCGAGTACTATGACTTTGTGTTGGAACACAAGCTTCTGTCCG
GGGGGGGATAA
back to top
Synonyms
Publications