NO12G02070.1, NO12G02070.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G02070.1
Unique Name	NO12G02070.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2808
Alignment location	chr12:584870..589201 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:584870..589201 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO12G02070.1 vs.
Match: EWM25834.1 (Prolyl 4-hydroxylase, alpha subunit [Nannochloropsis gaditana])

HSP 1 Score: 796.2 bits (2055), Expect = 9.600e-227
Identity = 419/653 (64.17%), Postives = 492/653 (75.34%), Query Frame = 0

Query:  149 MKTRRHIAPSGAGDKPTSP----ASASSTMTKASFQSPDLLLLLSFVGVAFMAFIAGMYPTETEAVVQETKGFVTGLLSR----TIGGSSNYISNRKTFQRVVVDPNPSHDIAYPTARLLGPEVTEEEVKKAPFRPHILTDSINPPVTPRHGAGELGVFLYRNGFSEDPLNAVVSRERLCRSPDALASTLSAVVDEDWGCKEADGCRVFLHNGWEISNCEELVEDDKLWLVPRHREFMWPTFKRGHLVEVRHVASGNGEPIVVETLSESPKVFRLNNFFTSEEADELIDNAVNLNDPVNGLHRSTTGQGMAAQEDSHRTSDNAWDIDSPASLRLKRRIFELLGIRPYKNAWADGLQILRYNTTQAYNSHFDYLETTQKGRLNSARRGGANRFATVVVYLTDVEVGGETVFPEGGALDGTDKSYDEVMREMKEQDIDLREIGIKAGSWQERLVVQCRSKLAVRPMKAQAVLFYDQLPQGGLDDASLHGGCPVLQGIKWAANLWVWNGNVHGPDETSDSSATDGKDSDGSHQVEFLSVVPGHSLYWQDTFFSDLMENVPIRMNTFEGHVFNIHKGRSVEEKGELVATYTMKAGRKSKDVKTYIFRGYAEDEEEVEETWSEDGEEAFEDEEDFEDEEDFE-DEEEFEDEEEFEDEE 793
            MKT R  APSGAG K +S     +S  ST TK   Q  D LL+ SFV  A +A +A MY      +V+ T+ F+  L  +    ++    +   + K F+RV+ D NPS D+A PTARLLG   T E++K APFRPH+LTDSINPPVTP H A  LG+FLY+NG S +P+N VV R+RLCRSP  LA+TL A VD++WGC+    CRVFLHNGWE+SNC+ELV+DDKLWLVPRHREF+WPTFKRGH VEVRHVASGNGEPI+VETLSESPKVFRLNNFFTS+EADELI + +NL DPVNGLHRSTTGQG +AQEDSHRTS+NAWD++SPASLRLKRRIF+LLGIRPYKNAWADGLQILRYN T+AYNSHFDYLE  +  R++SAR GG+NRFATVVVYLTDV  GGETVFP G ALDGTDKSY E ++EM+ QDIDLR IGIK GSWQERLVV+CRSKLAVRP+KAQAVLFY+QLP+GG D+ASLHGGCPVL+G+KWAANLWVWNGNVHG + TS     D    DGS  V FLS   G+SLYW+DTFF+ L   VP  MNTF+GH F+I +G + +EKG+LVATY MK     KD+ TY F                   +  ED EDF D+ED E D EE  D+++F  EE
Sbjct:    1 MKTSRVAAPSGAGGKASSSLKHNSSQLSTKTKPQSQRYDYLLICSFVCAALVALLAYMY--SPAKMVRTTQDFMRSLFRKGIEFSVSTDRHTGKSMKPFRRVLADANPSEDVARPTARLLGHGPTLEDLKSAPFRPHVLTDSINPPVTPHHEADVLGLFLYKNGDSSNPINVVVPRDRLCRSPLTLAATLGAEVDKEWGCEGRSSCRVFLHNGWEVSNCDELVDDDKLWLVPRHREFIWPTFKRGHQVEVRHVASGNGEPIIVETLSESPKVFRLNNFFTSQEADELIAHTLNLKDPVNGLHRSTTGQGASAQEDSHRTSENAWDLNSPASLRLKRRIFDLLGIRPYKNAWADGLQILRYNLTKAYNSHFDYLEHPKGSRMDSARPGGSNRFATVVVYLTDVAAGGETVFPAGKALDGTDKSYGEALKEMESQDIDLRAIGIKPGSWQERLVVECRSKLAVRPVKAQAVLFYNQLPEGGQDNASLHGGCPVLEGVKWAANLWVWNGNVHGDEHTSQVEEED----DGSLTVNFLSTNKGYSLYWEDTFFAALQPGVPKSMNTFDGHTFHIFEGTTEKEKGKLVATYVMKKRANRKDIPTYRF----------------SPTDNSEDNEDFTDDEDDEWDSEEMSDDDDFSPEE 631

The following BLAST results are available for this feature:

BLAST of NO12G02070.1 vs.

BLAST of NO12G02070.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25834.1	9.600e-227	64.17	Prolyl 4-hydroxylase, alpha subunit [Nannochlorops...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G02070	NO12G02070	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G02070.1	NO12G02070.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G02070.1.cds1	NO12G02070.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G02070.1.cds2	NO12G02070.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G02070.1.cds3	NO12G02070.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G02070.1.cds4	NO12G02070.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:584870..589201-
coding sequence from alignment at chr12:584870..589201-

mRNA sequence

>NO12G02070.1 ID=NO12G02070.1|Name=NO12G02070.1|organism=Nannochloropsis oceanica|type=mRNA|length=2808bp
ATGGCAAGCACGGGAATTTGCAAAGGCGAGACGGCATGGCTGCAGAAGAC
CATCACAGTGCAGGCTGAAGGGCGGGGATGTGAACTCATCACAAAACAAG
TAGTAGATGCCGTCCCTGAGCTGCGCAAATTTTCCGTCGGCACGCTTACC
GTCTTCATTCAGCACACTTCTGCCTCTCTTTCTATCAACGAAAACGCCGA
CCCTACCGTCCGCACAGACATGGAGAAAGCCCTGAACATGATCGTCCCTG
ATAGCTGGGCGACGGGCGGCTTGCTGGATCACGTTGACGAAGGGCCTGAC
GATATTACGGGCCATGTGAAGGCAACCCTTGTAGGAGCAAATTTGACCAT
ACCTGTCATGAAGGGCCGACTAGCTCTCGTCAAATCCCAGGATCTTGCGC
GGACGTCTTCCTCGCAGGTGAATAGCTACCGCGGGGAGAGGATAATGAAG
ACCCGACGACATATTGCCCCTTCTGGGGCAGGCGACAAACCCACCTCGCC
GGCCTCTGCGTCGTCCACAATGACCAAGGCGTCTTTCCAAAGCCCTGATC
TACTCCTTCTACTCAGCTTCGTGGGCGTTGCTTTCATGGCCTTCATTGCC
GGCATGTACCCCACCGAAACCGAGGCCGTGGTTCAGGAGACGAAAGGCTT
CGTGACAGGTCTGCTGAGCAGGACGATCGGCGGCAGCAGCAACTACATCA
GTAACAGAAAAACCTTCCAGCGAGTGGTGGTGGACCCCAATCCTTCGCAC
GACATAGCCTACCCGACAGCACGTCTTTTGGGACCGGAAGTGACCGAGGA
AGAAGTGAAGAAAGCCCCGTTTCGACCGCACATTCTCACGGACTCTATCA
ACCCGCCTGTGACCCCCCGCCATGGTGCCGGCGAGTTGGGTGTATTTCTG
TATCGCAACGGCTTCTCAGAAGACCCCCTAAACGCCGTTGTATCGCGGGA
GAGACTTTGCCGCTCGCCCGACGCCCTGGCCTCGACCCTGAGCGCCGTGG
TGGACGAGGACTGGGGCTGCAAGGAAGCGGACGGCTGCCGGGTATTCTTG
CACAATGGATGGGAGATCTCCAATTGCGAGGAGCTAGTTGAGGATGATAA
GCTCTGGCTGGTGCCTCGGCATCGAGAGTTTATGTGGCCTACCTTCAAGC
GGGGCCATCTGGTAGAGGTGCGGCACGTGGCGTCGGGCAATGGGGAGCCC
ATCGTGGTTGAGACCCTCTCCGAGTCGCCCAAGGTTTTCCGGCTTAACAA
CTTTTTCACCTCCGAGGAAGCGGACGAGCTCATCGACAATGCCGTGAATC
TGAACGATCCCGTCAATGGCCTCCACCGCTCAACCACGGGCCAGGGCATG
GCCGCGCAGGAGGACAGTCACCGCACAAGTGACAATGCGTGGGACATTGA
CTCACCCGCCTCCCTCCGTCTGAAGCGCCGAATCTTCGAGCTGCTGGGTA
TCCGTCCTTACAAAAATGCCTGGGCTGACGGCTTGCAGATCCTGCGGTAT
AATACCACGCAGGCTTACAACAGTCATTTTGACTACCTGGAGACTACGCA
GAAAGGCCGCCTCAACTCGGCCCGGCGGGGGGGCGCTAATCGATTTGCCA
CTGTGGTAGTGTATCTGACGGACGTGGAGGTGGGGGGCGAGACAGTTTTT
CCCGAAGGCGGTGCGCTGGATGGGACGGATAAGAGCTACGATGAGGTCAT
GAGGGAAATGAAGGAGCAAGATATCGACCTGCGTGAGATAGGCATCAAGG
CAGGTTCGTGGCAGGAGCGTTTGGTCGTCCAGTGCCGCAGCAAGCTGGCC
GTGAGGCCCATGAAGGCTCAGGCCGTTCTTTTCTATGACCAGCTGCCGCA
GGGAGGGCTGGACGATGCCTCTCTGCATGGAGGCTGCCCGGTCCTGCAGG
GCATCAAGTGGGCCGCTAACCTGTGGGTGTGGAATGGCAATGTGCACGGC
CCTGACGAAACAAGCGATTCCAGCGCAACGGATGGCAAAGACAGTGACGG
CAGCCATCAAGTCGAATTTCTCAGCGTAGTGCCTGGCCATAGCTTGTACT
GGCAAGACACCTTTTTCTCAGACCTGATGGAGAATGTACCTATACGTATG
AACACTTTTGAGGGCCATGTCTTCAACATTCACAAAGGGCGCAGTGTGGA
GGAGAAAGGCGAACTTGTGGCCACGTACACTATGAAGGCAGGGCGAAAGT
CCAAGGACGTAAAGACGTACATATTTAGAGGTTATGCGGAAGATGAGGAG
GAGGTAGAGGAGACGTGGAGTGAGGATGGCGAGGAGGCTTTCGAAGACGA
GGAGGATTTTGAAGACGAGGAGGATTTTGAAGACGAGGAGGAATTTGAAG
ACGAGGAGGAATTTGAAGACGAGGAAGAATTTGAAGACGAGGAGAATTTT
GAAGACGAGGAGGACGAGGAGGATTTCGATATGGAATGGAGTAGGTGAGC
GGGGTGACGATGATCGTTAAAAAAAAAAAGAAAACCCCAGAAACAATACA
GTGTGTGCGGCTTCTGGGCCTGAGAAGAAACAACTTCAGCAAAATAAGCA
CGCTGGTATGTAGGTTAAGAATTTTAGTTTGGGATTGAAAAAAGACAAAA
GGAATAAATTTCAAGAAGACAAATTCGAGGAATTGAGGTTTGAGAATATG
ATAACTATTGAGGAGCCCCAGGCTGCTACTAAGCGGCCTCATCTTCGTTT
CCCCTATTCCCGCCCGGGCTTCTAAAATTGCGGGATGCCAGCTTTGGGTG
TCCGTCCGCAGCGCCTCTGATTGGGCACGCACATGGTTTTGCTTGGGCCG
AACGGCTG

protein sequence of NO12G02070.1

>NO12G02070.1-protein ID=NO12G02070.1-protein|Name=NO12G02070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=816bp
MASTGICKGETAWLQKTITVQAEGRGCELITKQVVDAVPELRKFSVGTLT
VFIQHTSASLSINENADPTVRTDMEKALNMIVPDSWATGGLLDHVDEGPD
DITGHVKATLVGANLTIPVMKGRLALVKSQDLARTSSSQVNSYRGERIMK
TRRHIAPSGAGDKPTSPASASSTMTKASFQSPDLLLLLSFVGVAFMAFIA
GMYPTETEAVVQETKGFVTGLLSRTIGGSSNYISNRKTFQRVVVDPNPSH
DIAYPTARLLGPEVTEEEVKKAPFRPHILTDSINPPVTPRHGAGELGVFL
YRNGFSEDPLNAVVSRERLCRSPDALASTLSAVVDEDWGCKEADGCRVFL
HNGWEISNCEELVEDDKLWLVPRHREFMWPTFKRGHLVEVRHVASGNGEP
IVVETLSESPKVFRLNNFFTSEEADELIDNAVNLNDPVNGLHRSTTGQGM
AAQEDSHRTSDNAWDIDSPASLRLKRRIFELLGIRPYKNAWADGLQILRY
NTTQAYNSHFDYLETTQKGRLNSARRGGANRFATVVVYLTDVEVGGETVF
PEGGALDGTDKSYDEVMREMKEQDIDLREIGIKAGSWQERLVVQCRSKLA
VRPMKAQAVLFYDQLPQGGLDDASLHGGCPVLQGIKWAANLWVWNGNVHG
PDETSDSSATDGKDSDGSHQVEFLSVVPGHSLYWQDTFFSDLMENVPIRM
NTFEGHVFNIHKGRSVEEKGELVATYTMKAGRKSKDVKTYIFRGYAEDEE
EVEETWSEDGEEAFEDEEDFEDEEDFEDEEEFEDEEEFEDEEEFEDEENF
EDEEDEEDFDMEWSR*

mRNA from alignment at chr12:584870..589201-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G02070.1 ID=NO12G02070.1|Name=NO12G02070.1|organism=Nannochloropsis oceanica|type=mRNA|length=4332bp|location=Sequence derived from alignment at chr12:584870..589201- (Nannochloropsis oceanica)
ATGGCAAGCACGGGAATTTGCAAAGGCGAGACGGCATGGCTGCAGAAGAC
CATCACAGTGCAGGCTGAAGGGCGGGGATGTGAACTCATCACAAAACAAG
TAGTAGATGCCGTCCCTGAGCTGCGCAAATTTTCCGTCGGCACGCTTACC
GTCTTCATTCAGCACACTTCTGCCTCTCTTTCTATCAACGAAAACGCCGA
CCCTACCGGTGAGCGAGAAAGAATCAATCATGTACTGACTTGTATTTAAA
CATGAAATATTTTTTCCGATAGCAAATATCACATCTCCTCAATGCCATGC
ATCACCAATCCACAAAACCAGTCCGCACAGACATGGAGAAAGCCCTGAAC
ATGATCGTCCCTGATAGCTGGGCGACGGGCGGCTTGCTGGATCACGTTGA
CGAAGGGCCTGACGATATTACGGGCCATGTGAAGGCAACCCTTGTAGGAG
CAAATTTGACCATACCTGTCATGAAGGGCCGACTAGCTCTCGGTACGTGG
CAGGGTATCTATCTGTGCGAGCATCGCAACGCGGGCGGTTATGGAGGAGG
CCACGCGCGGCGCCTCATCATTACGATTCATGGTCTAGTGTGTTCTTGAG
CGTTAGAGGAGGGGGCAGCGGATCAGTACGGATTCGAGTGGGCAGGGAAA
ATGGTTGGATGACCGGTGAGGCATAAGACGAACCACATAACATGAAACTT
CAAGCCCCCCCGGGGGGATGTCTTTTTCTGCTTTGTTCTTGACGCTTTAT
TGTGAACGTTTGCTTTGTCGATGATGTTAAGGGACCCCTTAAGAAATTAT
AGGGTAAGGGGAGAGGGGAGAAATGTTGGTGAAGCAAAATGTTCATCTTG
ATTGCTCAGACAGAGTTCTGTAACAGGACGACGCTCACATTTCATGCACT
TGAAATACCTTCATGCTTGTGCGATTGTGACATGTATATATCTTCTGACC
AAATAAATCTAGGGAATCGATTTGCATCTTTCATCTCACCAGCTACATCT
ATTACCATGGCGGTACCTAGGCCCTGTGGCTTCTGCCAAGGATTCAACCG
CGAACCGCGTGGGGTAGAATATGGGATGATTTTACCGGATTTTACAGCAA
GAACGACAGGAGCGTGGTAGTTACCGCCGGAAAGACTATGTCAGGCACTT
TACGTGTGCCAAGCCACGGTCGACTCACTCTAAATGATATACATACATAC
ATTTATGTCGATAAATGTCGATTTGAAATATTTCCCTACAGTTCTGTGAT
TCGGAATCACGAGCGAGAGCGCTGATCGGCCCCCCGAGCAAAAGAGTTTG
GCTTGCTTGCCTGGACCGCCTGCCCCTCACGGCATGCAACTAATTGAAAA
CAACGAGCATTTTGAGGTATGAGCATTCCCGGGAGACAGTGTCGTGCTTG
TAGCCAAATTTTTCTCCAAATCGCCATCTTTTCAAATGTATGGGCTTCTT
TCTTCACACCTTCGTCAACCCTTCGGGTGAGCTGCATCCAAGCAAGAACA
CATGGTTCTGTCCCGGAGCACCGAACCACACTTCACTGTCCGACAATTGA
ACTCACAACTTCCATTGCACCTCTTTCTACACAGTCAAATCCCAGGATCT
TGCGCGGACGTCTTCCTCGCAGGTGAATAGCTACCGCGGGGAGAGGATAA
TGAAGACCCGACGACATATTGCCCCTTCTGGGGCAGGCGACAAACCCACC
TCGCCGGCCTCTGCGTCGTCCACAATGACCAAGGCGTCTTTCCAAAGCCC
TGATCTACTCCTTCTACTCAGCTTCGTGGGCGTTGCTTTCATGGCCTTCA
TTGGTACGTATCAAACACGCGTTTGTGTCCTCCCATGCCTTTGAATTCGA
CGTTCACATGGTGCATTTTGATGCCTATGCGAGGTCGTGCCGATACGATA
CCGATCAGAGCCTCATCATGTCTTATCAATGTAAACGGATTTGTCCGCGA
TTTCTCCCTGGCTCAAGCATTTCTTTCCTTTTTAACTTAAAGAAATTCTT
AATGCCGCTCCAGCCATATCAGTTCAGACCATCGGCAAGAGACTACCCAC
CCCCCGCAAATGGTAACACCCCTTATAACAATCACCCACTCTCCCCAACC
TCTTTCCTATCTCCACACACAGCCGGCATGTACCCCACCGAAACCGAGGC
CGTGGTTCAGGAGACGAAAGGCTTCGTGACAGGTCTGCTGAGCAGGACGA
TCGGCGGCAGCAGCAACTACATCAGTAACAGAAAAACCTTCCAGCGAGTG
GTGGTGGACCCCAATCCTTCGCACGACATAGCCTACCCGACAGCACGTCT
TTTGGGACCGGAAGTGACCGAGGAAGAAGTGAAGAAAGCCCCGTTTCGAC
CGCACATTCTCACGGACTCTATCAACCCGCCTGTGACCCCCCGCCATGGT
GCCGGCGAGTTGGGTGTATTTCTGTATCGCAACGGCTTCTCAGAAGACCC
CCTAAACGCCGTTGTATCGCGGGAGAGACTTTGCCGCTCGCCCGACGCCC
TGGCCTCGACCCTGAGCGCCGTGGTGGACGAGGACTGGGGCTGCAAGGAA
GCGGACGGCTGCCGGGTATTCTTGCACAATGGATGGGAGATCTCCAATTG
CGAGGAGCTAGTTGAGGATGATAAGCTCTGGCTGGTGCCTCGGCATCGAG
AGTTTATGTGGCCTACCTTCAAGCGGGGCCATCTGGTAGAGGTGCGGCAC
GTGGCGTCGGGCAATGGGGAGCCCATCGTGGTTGAGACCCTCTCCGAGTC
GCCCAAGGTTTTCCGGCTTAACAACTTTTTCACCTCCGAGGAAGCGGACG
AGCTCATCGACAATGCCGTGAATCTGAACGATCCCGTCAATGGCCTCCAC
CGCTCAACCACGGGCCAGGGCATGGCCGCGCAGGAGGACAGTCACCGCAC
AAGTGACAATGCGTGGGACATTGACTCACCCGCCTCCCTCCGTCTGAAGC
GCCGAATCTTCGAGCTGCTGGGTATCCGTCCTTACAAAAATGCCTGGGCT
GACGGCTTGCAGATCCTGCGGTATAATACCACGCAGGCTTACAACAGTCA
TTTTGACTACCTGGAGACTACGCAGAAAGGCCGCCTCAACTCGGCCCGGC
GGGGGGGCGCTAATCGATTTGCCACTGTGGTAGTGTATCTGACGGACGTG
GAGGTGGGGGGCGAGACAGTTTTTCCCGAAGGCGGTGCGCTGGATGGGAC
GGATAAGAGCTACGATGAGGTCATGAGGGAAATGAAGGAGCAAGATATCG
ACCTGCGTGAGATAGGCATCAAGGCAGGTTCGTGGCAGGAGCGTTTGGTC
GTCCAGTGCCGCAGCAAGCTGGCCGTGAGGCCCATGAAGGCTCAGGCCGT
TCTTTTCTATGACCAGCTGCCGCAGGGAGGGCTGGACGATGCCTCTCTGC
ATGGAGGCTGCCCGGTCCTGCAGGGCATCAAGTGGGCCGCTAACCTGTGG
GTGTGGAATGGCAATGTGCACGGCCCTGACGAAACAAGCGATTCCAGCGC
AACGGATGGCAAAGACAGTGACGGCAGCCATCAAGTCGAATTTCTCAGCG
TAGTGCCTGGCCATAGCTTGTACTGGCAAGACACCTTTTTCTCAGACCTG
ATGGAGAATGTACCTATACGTATGAACACTTTTGAGGGCCATGTCTTCAA
CATTCACAAAGGGCGCAGTGTGGAGGAGAAAGGCGAACTTGTGGCCACGT
ACACTATGAAGGCAGGGCGAAAGTCCAAGGACGTAAAGACGTACATATTT
AGAGGTTATGCGGAAGATGAGGAGGAGGTAGAGGAGACGTGGAGTGAGGA
TGGCGAGGAGGCTTTCGAAGACGAGGAGGATTTTGAAGACGAGGAGGATT
TTGAAGACGAGGAGGAATTTGAAGACGAGGAGGAATTTGAAGACGAGGAA
GAATTTGAAGACGAGGAGAATTTTGAAGACGAGGAGGACGAGGAGGATTT
CGATATGGAATGGAGTAGGTGAGCGGGGTGACGATGATCGTTAAAAAAAA
AAAGAAAACCCCAGAAACAATACAGTGTGTGCGGCTTCTGGGCCTGAGAA
GAAACAACTTCAGCAAAATAAGCACGCTGGTATGTAGGTTAAGAATTTTA
GTTTGGGATTGAAAAAAGACAAAAGGAATAAATTTCAAGAAGACAAATTC
GAGGAATTGAGGTTTGAGAATATGATAACTATTGAGGAGCCCCAGGCTGC
TACTAAGCGGCCTCATCTTCGTTTCCCCTATTCCCGCCCGGGCTTCTAAA
ATTGCGGGATGCCAGCTTTGGGTGTCCGTCCGCAGCGCCTCTGATTGGGC
ACGCACATGGTTTTGCTTGGGCCGAACGGCTG

Coding sequence (CDS) from alignment at chr12:584870..589201-

>NO12G02070.1 ID=NO12G02070.1|Name=NO12G02070.1|organism=Nannochloropsis oceanica|type=CDS|length=2448bp|location=Sequence derived from alignment at chr12:584870..589201- (Nannochloropsis oceanica)
ATGGCAAGCACGGGAATTTGCAAAGGCGAGACGGCATGGCTGCAGAAGAC
CATCACAGTGCAGGCTGAAGGGCGGGGATGTGAACTCATCACAAAACAAG
TAGTAGATGCCGTCCCTGAGCTGCGCAAATTTTCCGTCGGCACGCTTACC
GTCTTCATTCAGCACACTTCTGCCTCTCTTTCTATCAACGAAAACGCCGA
CCCTACCGTCCGCACAGACATGGAGAAAGCCCTGAACATGATCGTCCCTG
ATAGCTGGGCGACGGGCGGCTTGCTGGATCACGTTGACGAAGGGCCTGAC
GATATTACGGGCCATGTGAAGGCAACCCTTGTAGGAGCAAATTTGACCAT
ACCTGTCATGAAGGGCCGACTAGCTCTCGTCAAATCCCAGGATCTTGCGC
GGACGTCTTCCTCGCAGGTGAATAGCTACCGCGGGGAGAGGATAATGAAG
ACCCGACGACATATTGCCCCTTCTGGGGCAGGCGACAAACCCACCTCGCC
GGCCTCTGCGTCGTCCACAATGACCAAGGCGTCTTTCCAAAGCCCTGATC
TACTCCTTCTACTCAGCTTCGTGGGCGTTGCTTTCATGGCCTTCATTGCC
GGCATGTACCCCACCGAAACCGAGGCCGTGGTTCAGGAGACGAAAGGCTT
CGTGACAGGTCTGCTGAGCAGGACGATCGGCGGCAGCAGCAACTACATCA
GTAACAGAAAAACCTTCCAGCGAGTGGTGGTGGACCCCAATCCTTCGCAC
GACATAGCCTACCCGACAGCACGTCTTTTGGGACCGGAAGTGACCGAGGA
AGAAGTGAAGAAAGCCCCGTTTCGACCGCACATTCTCACGGACTCTATCA
ACCCGCCTGTGACCCCCCGCCATGGTGCCGGCGAGTTGGGTGTATTTCTG
TATCGCAACGGCTTCTCAGAAGACCCCCTAAACGCCGTTGTATCGCGGGA
GAGACTTTGCCGCTCGCCCGACGCCCTGGCCTCGACCCTGAGCGCCGTGG
TGGACGAGGACTGGGGCTGCAAGGAAGCGGACGGCTGCCGGGTATTCTTG
CACAATGGATGGGAGATCTCCAATTGCGAGGAGCTAGTTGAGGATGATAA
GCTCTGGCTGGTGCCTCGGCATCGAGAGTTTATGTGGCCTACCTTCAAGC
GGGGCCATCTGGTAGAGGTGCGGCACGTGGCGTCGGGCAATGGGGAGCCC
ATCGTGGTTGAGACCCTCTCCGAGTCGCCCAAGGTTTTCCGGCTTAACAA
CTTTTTCACCTCCGAGGAAGCGGACGAGCTCATCGACAATGCCGTGAATC
TGAACGATCCCGTCAATGGCCTCCACCGCTCAACCACGGGCCAGGGCATG
GCCGCGCAGGAGGACAGTCACCGCACAAGTGACAATGCGTGGGACATTGA
CTCACCCGCCTCCCTCCGTCTGAAGCGCCGAATCTTCGAGCTGCTGGGTA
TCCGTCCTTACAAAAATGCCTGGGCTGACGGCTTGCAGATCCTGCGGTAT
AATACCACGCAGGCTTACAACAGTCATTTTGACTACCTGGAGACTACGCA
GAAAGGCCGCCTCAACTCGGCCCGGCGGGGGGGCGCTAATCGATTTGCCA
CTGTGGTAGTGTATCTGACGGACGTGGAGGTGGGGGGCGAGACAGTTTTT
CCCGAAGGCGGTGCGCTGGATGGGACGGATAAGAGCTACGATGAGGTCAT
GAGGGAAATGAAGGAGCAAGATATCGACCTGCGTGAGATAGGCATCAAGG
CAGGTTCGTGGCAGGAGCGTTTGGTCGTCCAGTGCCGCAGCAAGCTGGCC
GTGAGGCCCATGAAGGCTCAGGCCGTTCTTTTCTATGACCAGCTGCCGCA
GGGAGGGCTGGACGATGCCTCTCTGCATGGAGGCTGCCCGGTCCTGCAGG
GCATCAAGTGGGCCGCTAACCTGTGGGTGTGGAATGGCAATGTGCACGGC
CCTGACGAAACAAGCGATTCCAGCGCAACGGATGGCAAAGACAGTGACGG
CAGCCATCAAGTCGAATTTCTCAGCGTAGTGCCTGGCCATAGCTTGTACT
GGCAAGACACCTTTTTCTCAGACCTGATGGAGAATGTACCTATACGTATG
AACACTTTTGAGGGCCATGTCTTCAACATTCACAAAGGGCGCAGTGTGGA
GGAGAAAGGCGAACTTGTGGCCACGTACACTATGAAGGCAGGGCGAAAGT
CCAAGGACGTAAAGACGTACATATTTAGAGGTTATGCGGAAGATGAGGAG
GAGGTAGAGGAGACGTGGAGTGAGGATGGCGAGGAGGCTTTCGAAGACGA
GGAGGATTTTGAAGACGAGGAGGATTTTGAAGACGAGGAGGAATTTGAAG
ACGAGGAGGAATTTGAAGACGAGGAAGAATTTGAAGACGAGGAGAATTTT
GAAGACGAGGAGGACGAGGAGGATTTCGATATGGAATGGAGTAGGTGA

Synonyms

Publications