NO12G01780.1, NO12G01780.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G01780.1
Unique Name	NO12G01780.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3402
Alignment location	chr12:521844..525245 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:521844..525245 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G01780.1 vs.
Match: EWM25885.1 (n-acetyltransferase 10 [Nannochloropsis gaditana])

HSP 1 Score: 1478.0 bits (3825), Expect = 0.000e+0
Identity = 809/1065 (75.96%), Postives = 895/1065 (84.04%), Query Frame = 0

Query:    1 MVRKKVDDRVRTLIENGVKSRHRSLLVLVGDHGKDQVANLHYILSRTQVKARPSVLWCYKKELGFSTHRKKRMRQIKRNVQRGLHDPDKDDPFDLFVSSTNIRWCYYKETHRILGQTFGMCVLQDFEALTPNLLARTVETVEGGGLVVLLLQSVASLRQLYTMSMDVHARFRTEAHGDVVARFNERFILSLGDCDSCLVLDDELNVLPISKKSRALTALPGALDDGVLAVAEMELKELKESVSEMQPLGALVGAARTVDQAQAVVSFLDAVQNKALRTTVSLTASRGRGKSAAVGLCLAGAIAFGYSNIYVTAPSPENLETVFDFVKRGLVALKYQEHLDFEVVQAGHHQVGQQGGADAKATVRVSVFRGHRQVVQYIAPHEHEKLSQAELVAVDEAAAIPLPLVKKLLGPYLVFLSSTVTGYEGTGRSLSLKLVAQLREQQGKATVGTRSLKEVTLESPIRYARGDPVERWLHEVLCLDAQIGNHRIVTTLPPVGACQLYQVDRDTLFAYHKVSEAFLQRVMALYTAAHYKNQPNDLQLLSDAPAHRLFVLLGPPGSSSSTSGVPDILCVIQVALEGRISQASVQASLARGHRASGDLIPWTMSQQFQDSEFAKLSGARIVRIATHPDAQKLGYGTRALKLLLEHYSGKAS-KEQVAVAVIDGKGKKGKNHEEEEKEEEKEEKKEEEEDDDEARESTKKLRHERVAPRKELPPLLTRVDEVKHAERLHWVGTSYGLTEKLLNFWSRLGMRMVYLRQTANDLTGEHTAIMLTALDTKGMKENSPNADWLAMFAADALRRLVSLLSFEFREQLDTALDLAILENVRSGLPSPGPPITAKQLGYLLIPRDLERLHLYARNLADYHLITDLLPTLARVYFLRMLPASVSLSKLMEAILVGLGLRHRTVDQLARELGIDGETVLAMFNKVVRKIGASLKEIQGQDDGGAV-----------VQQQQQQQQQQYEKNKKK-KKEKDALMAAQQKQHQQQQQQQQQQQQQQQQQQQQQQERGKMDKKRGAAAIGEAANGVTNEHHATS--EMKRKHSQREREKEKEDASKE 1051
            MVRKKVDDRVRTLIENGV+SRHRSLLVLVGDHGKDQV NLHYILSRTQVKARPSVLWCYKKELGFSTHRKKRMRQIKRNVQRGLHDPDKDDPFDLF+SSTNIRWCYYKETHRILGQTFGMCVLQDFEALTPNLLARTVETVEGGGLVVLLLQSV SLRQLYTM+MDVHARFRTEAHGDV+ARFNERFILSL DC +CLVLDDELNVLPIS KSRAL A PG +D G +  AE  L +LKESV+EMQPLGALV  ARTVDQA+AV+SFL+AVQ+KALRTTVSLTASRGRGKSAAVGLCLAGA+AFGYSNI+VTAPSPENLETVFDFVKRGLVALKYQEHLDFEVVQAGHH+ G QGG DA+ATVR+SVFR HRQV+QYIAPHEHEKLSQAELVAVDEAAAIPLPLVK+LLGPYLVFLSSTVTGYEGTGRSLSLKLVAQLREQQG+A  G R LKEVTLE+PIRYA GDP+ERWL+ VLCLDAQI  HRIV++LPP  ACQLYQVDRD LF+YHKVSEAFLQRVMALYTAAHYKNQPNDLQLLSDAPAHRLFVLLGPPGSSSS   +PD+LCVIQVALEGRISQASVQASLARGHRASGDLIPWTMSQQFQD++FAKLSGAR+VRIATHPDAQ+LGYGTRAL LLLEHY+GK S    VAV V DG  ++G   E+E +E E + KK +             LR ER+ PR+ELPPLL  +D++K  ERLHWVG+S+GLTE LLNFW+R GMR+VYLRQTANDLTGEHTAIML AL T+G++  +   DWLA FA D LRRLVSLLSFEFREQL TALDLAIL NVR GL  PGPPITAKQLGYLLIPRDLERLHLYARNLADYHLITDLLPTLARVYFLRMLPASV LS+LMEAILVGLGLRHRTVDQLARELGI+G+ +LA+FNK+VRKIGAS+KEI GQ +   V             +  ++ Q   E  K K   E +   A ++++  ++++ +          Q++ +++ K  KK+   A+       + EH   S  E K+  S     K+K+   K+
Sbjct:    1 MVRKKVDDRVRTLIENGVQSRHRSLLVLVGDHGKDQVVNLHYILSRTQVKARPSVLWCYKKELGFSTHRKKRMRQIKRNVQRGLHDPDKDDPFDLFISSTNIRWCYYKETHRILGQTFGMCVLQDFEALTPNLLARTVETVEGGGLVVLLLQSVTSLRQLYTMAMDVHARFRTEAHGDVLARFNERFILSLADCRTCLVLDDELNVLPISTKSRALVAGPG-VDQGAIGAAEAALSDLKESVAEMQPLGALVSLARTVDQAKAVISFLEAVQDKALRTTVSLTASRGRGKSAAVGLCLAGAVAFGYSNIFVTAPSPENLETVFDFVKRGLVALKYQEHLDFEVVQAGHHRQGPQGGLDARATVRISVFRQHRQVIQYIAPHEHEKLSQAELVAVDEAAAIPLPLVKRLLGPYLVFLSSTVTGYEGTGRSLSLKLVAQLREQQGRAMAGMRKLKEVTLETPIRYAAGDPIERWLYAVLCLDAQISKHRIVSSLPPASACQLYQVDRDALFSYHKVSEAFLQRVMALYTAAHYKNQPNDLQLLSDAPAHRLFVLLGPPGSSSSPDALPDVLCVIQVALEGRISQASVQASLARGHRASGDLIPWTMSQQFQDADFAKLSGARVVRIATHPDAQRLGYGTRALTLLLEHYAGKMSPAPAVAVEVSDGAPREGSEGEDEAEEGEVKSKKSQ-------------LRDERLRPRQELPPLLVPLDKLKGRERLHWVGSSFGLTESLLNFWARAGMRLVYLRQTANDLTGEHTAIMLRALSTEGLEGEAVAGDWLAAFAEDTLRRLVSLLSFEFREQLGTALDLAILNNVREGLAPPGPPITAKQLGYLLIPRDLERLHLYARNLADYHLITDLLPTLARVYFLRMLPASVHLSRLMEAILVGLGLRHRTVDQLARELGIEGDQILALFNKIVRKIGASMKEIGGQQEVAGVSAVSGKGMTHGPSKAPKKDQASVESRKNKGAAELNGSHAEKKRKLLEEERGEPPALLSIDPAQERSRDKEKKKKKKDTTAVHAQTKSPSVEHDVISAVEFKKGTSPVVSPKKKDKKQKK 1051

The following BLAST results are available for this feature:

BLAST of NO12G01780.1 vs.

BLAST of NO12G01780.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25885.1	0.000e+0	75.96	n-acetyltransferase 10 [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G01780	NO12G01780	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G01780.1	NO12G01780.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G01780.1.cds1	NO12G01780.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:521844..525245-
coding sequence from alignment at chr12:521844..525245-

mRNA sequence

>NO12G01780.1 ID=NO12G01780.1|Name=NO12G01780.1|organism=Nannochloropsis oceanica|type=mRNA|length=3402bp
ATGGTGCGCAAAAAGGTGGACGACCGTGTACGAACGCTGATCGAAAACGG
CGTAAAGTCACGGCATCGCTCGCTGCTTGTGCTTGTAGGAGATCATGGCA
AGGACCAGGTGGCGAATCTGCATTACATTCTGAGCCGGACCCAGGTCAAG
GCCCGACCCTCGGTCTTATGGTGCTACAAGAAGGAGCTGGGCTTCTCCAC
TCACCGCAAGAAGCGCATGCGGCAAATCAAGCGGAATGTGCAAAGGGGGT
TGCATGACCCAGACAAGGACGACCCGTTTGACTTGTTTGTCTCGTCCACT
AATATCCGATGGTGCTACTACAAGGAGACACATCGCATTTTGGGGCAGAC
GTTTGGCATGTGCGTGCTGCAGGACTTTGAGGCCCTAACGCCCAATTTGC
TGGCACGTACCGTAGAGACAGTGGAGGGTGGAGGGTTAGTTGTGTTATTG
CTTCAATCGGTGGCGTCGCTTCGTCAGCTTTACACCATGAGCATGGACGT
GCATGCGCGCTTTCGTACCGAGGCCCACGGGGATGTGGTGGCCCGGTTTA
ACGAGCGTTTCATTCTGTCCTTGGGTGACTGTGACAGCTGCTTGGTGCTC
GACGACGAATTAAATGTGTTGCCAATATCGAAGAAGAGCCGGGCTTTAAC
AGCGCTGCCAGGGGCATTGGATGATGGGGTGTTGGCTGTGGCGGAGATGG
AGCTAAAGGAGCTCAAAGAGAGTGTATCAGAAATGCAACCTCTGGGCGCG
TTGGTGGGTGCGGCACGGACCGTGGATCAAGCACAGGCTGTGGTGTCATT
TTTGGATGCCGTGCAAAACAAAGCATTGCGGACAACGGTTAGTTTGACGG
CGTCCCGGGGGAGGGGAAAATCCGCGGCGGTTGGTCTATGCCTAGCGGGG
GCGATTGCGTTCGGCTACAGTAACATATATGTCACGGCCCCGTCGCCTGA
GAATTTGGAAACGGTATTTGATTTTGTGAAGCGGGGATTGGTGGCACTGA
AGTATCAGGAGCACTTGGATTTTGAGGTTGTTCAGGCGGGGCATCATCAG
GTGGGGCAGCAGGGAGGGGCGGATGCGAAGGCGACTGTGAGGGTTTCGGT
TTTTCGGGGTCATCGGCAGGTGGTGCAATATATTGCGCCGCATGAACACG
AAAAGTTATCCCAGGCAGAGTTGGTTGCGGTGGACGAGGCGGCTGCCATT
CCTTTGCCGTTGGTCAAGAAGTTGTTGGGGCCTTACTTGGTGTTCTTGTC
GTCGACTGTGACGGGGTACGAAGGGACGGGTCGCTCGCTTTCCCTTAAAT
TGGTGGCACAGCTCCGTGAGCAGCAGGGAAAAGCCACGGTGGGCACGCGA
AGTTTGAAGGAGGTGACATTGGAGTCGCCAATTCGATATGCGAGGGGGGA
TCCGGTTGAGAGGTGGTTGCACGAGGTCTTGTGCCTGGACGCACAAATTG
GCAATCATCGTATTGTCACTACCCTGCCGCCAGTCGGTGCCTGCCAGCTC
TACCAAGTGGATCGAGACACCCTTTTTGCCTACCACAAGGTCTCTGAAGC
CTTTCTCCAGCGAGTAATGGCTCTCTACACAGCAGCCCACTATAAAAACC
AACCCAACGACCTCCAACTGTTGTCCGATGCCCCCGCCCACCGCCTCTTC
GTCCTTCTTGGACCACCCGGCTCCTCCTCCTCCACCTCAGGCGTTCCCGA
TATTCTATGCGTCATCCAAGTCGCCCTCGAAGGCCGCATCTCCCAAGCTT
CTGTCCAAGCCTCCCTTGCTCGTGGCCATCGGGCGTCCGGTGATCTTATC
CCCTGGACTATGTCTCAACAATTTCAAGACAGCGAATTTGCCAAACTATC
GGGCGCCAGGATAGTGCGCATTGCCACACACCCGGATGCGCAAAAATTGG
GATATGGCACGAGGGCACTGAAATTGTTGCTTGAGCATTACTCGGGCAAG
GCTAGTAAGGAGCAAGTGGCGGTAGCAGTGATTGATGGAAAGGGGAAGAA
GGGGAAGAATCACGAGGAGGAGGAGAAGGAGGAGGAGAAGGAGGAGAAGA
AGGAGGAGGAGGAGGACGATGACGAAGCAAGAGAGAGCACGAAAAAGCTG
CGGCATGAGCGGGTGGCCCCGCGTAAGGAGCTCCCGCCCCTGCTGACGCG
TGTGGATGAGGTGAAGCACGCAGAGCGTTTGCATTGGGTTGGAACTTCAT
ATGGCTTGACCGAGAAATTACTTAATTTTTGGTCAAGACTCGGGATGCGT
ATGGTGTACTTACGACAGACTGCCAATGACTTGACAGGGGAACACACGGC
GATTATGCTCACGGCGTTGGACACGAAGGGGATGAAGGAAAATTCGCCCA
ATGCGGATTGGCTTGCGATGTTCGCGGCAGACGCCCTCAGGCGATTGGTA
AGTCTTTTGTCGTTTGAATTCAGGGAGCAGTTGGACACGGCGCTAGATCT
TGCGATTCTCGAGAATGTCCGCAGTGGTCTTCCCTCTCCGGGTCCTCCGA
TTACGGCGAAACAATTGGGCTACTTGCTGATTCCGAGGGATTTGGAACGA
CTACATTTGTACGCACGGAATTTGGCCGACTATCATTTGATCACCGACCT
CTTACCTACGCTTGCCCGAGTTTATTTTTTGAGAATGTTGCCAGCGAGTG
TGAGTTTATCGAAATTGATGGAGGCGATTTTAGTGGGACTGGGCTTGAGG
CACCGGACGGTGGATCAGCTTGCACGGGAGTTGGGGATAGATGGAGAGAC
CGTGCTGGCGATGTTTAATAAAGTGGTGAGAAAGATTGGGGCGAGCTTGA
AGGAGATTCAGGGGCAAGATGATGGAGGCGCGGTTGTACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGTATGAAAAAAATAAGAAGAAGAAAAAGGAAAA
GGACGCGTTGATGGCAGCACAACAAAAGCAGCATCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAA
GAGAGGGGGAAGATGGACAAGAAGCGTGGAGCAGCTGCGATTGGAGAAGC
GGCAAATGGGGTGACAAATGAACACCATGCCACCTCGGAAATGAAGCGCA
AGCACAGTCAGAGGGAAAGAGAGAAAGAGAAGGAGGATGCGAGCAAGGAG
GCTGCTGCCGCAGGGATGTCTGCAGAAGACGCGGGCACCGCGCCGAATAA
GGATAACAAAAAGAGGAGGAAGAAGATGAAGGAGAAGGGCAACACCAAGG
CGGACGTGGCGAAACCTGCCCCGCGGCAAGAGCGGAAGGGGGGGGGAAAG
GAAGAGGAAGACGGAATGTTGGTGGAAGTGGAAGATGAGGTCTCGCCTAA
CAAGAAGAGCAAAAAGCCTAAGAAGCATAAAAAGGAGAGACAGATGCATT
AA

protein sequence of NO12G01780.1

>NO12G01780.1-protein ID=NO12G01780.1-protein|Name=NO12G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1134bp
MVRKKVDDRVRTLIENGVKSRHRSLLVLVGDHGKDQVANLHYILSRTQVK
ARPSVLWCYKKELGFSTHRKKRMRQIKRNVQRGLHDPDKDDPFDLFVSST
NIRWCYYKETHRILGQTFGMCVLQDFEALTPNLLARTVETVEGGGLVVLL
LQSVASLRQLYTMSMDVHARFRTEAHGDVVARFNERFILSLGDCDSCLVL
DDELNVLPISKKSRALTALPGALDDGVLAVAEMELKELKESVSEMQPLGA
LVGAARTVDQAQAVVSFLDAVQNKALRTTVSLTASRGRGKSAAVGLCLAG
AIAFGYSNIYVTAPSPENLETVFDFVKRGLVALKYQEHLDFEVVQAGHHQ
VGQQGGADAKATVRVSVFRGHRQVVQYIAPHEHEKLSQAELVAVDEAAAI
PLPLVKKLLGPYLVFLSSTVTGYEGTGRSLSLKLVAQLREQQGKATVGTR
SLKEVTLESPIRYARGDPVERWLHEVLCLDAQIGNHRIVTTLPPVGACQL
YQVDRDTLFAYHKVSEAFLQRVMALYTAAHYKNQPNDLQLLSDAPAHRLF
VLLGPPGSSSSTSGVPDILCVIQVALEGRISQASVQASLARGHRASGDLI
PWTMSQQFQDSEFAKLSGARIVRIATHPDAQKLGYGTRALKLLLEHYSGK
ASKEQVAVAVIDGKGKKGKNHEEEEKEEEKEEKKEEEEDDDEARESTKKL
RHERVAPRKELPPLLTRVDEVKHAERLHWVGTSYGLTEKLLNFWSRLGMR
MVYLRQTANDLTGEHTAIMLTALDTKGMKENSPNADWLAMFAADALRRLV
SLLSFEFREQLDTALDLAILENVRSGLPSPGPPITAKQLGYLLIPRDLER
LHLYARNLADYHLITDLLPTLARVYFLRMLPASVSLSKLMEAILVGLGLR
HRTVDQLARELGIDGETVLAMFNKVVRKIGASLKEIQGQDDGGAVVQQQQ
QQQQQQYEKNKKKKKEKDALMAAQQKQHQQQQQQQQQQQQQQQQQQQQQQ
ERGKMDKKRGAAAIGEAANGVTNEHHATSEMKRKHSQREREKEKEDASKE
AAAAGMSAEDAGTAPNKDNKKRRKKMKEKGNTKADVAKPAPRQERKGGGK
EEEDGMLVEVEDEVSPNKKSKKPKKHKKERQMH*

mRNA from alignment at chr12:521844..525245-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G01780.1 ID=NO12G01780.1|Name=NO12G01780.1|organism=Nannochloropsis oceanica|type=mRNA|length=3402bp|location=Sequence derived from alignment at chr12:521844..525245- (Nannochloropsis oceanica)
ATGGTGCGCAAAAAGGTGGACGACCGTGTACGAACGCTGATCGAAAACGG
CGTAAAGTCACGGCATCGCTCGCTGCTTGTGCTTGTAGGAGATCATGGCA
AGGACCAGGTGGCGAATCTGCATTACATTCTGAGCCGGACCCAGGTCAAG
GCCCGACCCTCGGTCTTATGGTGCTACAAGAAGGAGCTGGGCTTCTCCAC
TCACCGCAAGAAGCGCATGCGGCAAATCAAGCGGAATGTGCAAAGGGGGT
TGCATGACCCAGACAAGGACGACCCGTTTGACTTGTTTGTCTCGTCCACT
AATATCCGATGGTGCTACTACAAGGAGACACATCGCATTTTGGGGCAGAC
GTTTGGCATGTGCGTGCTGCAGGACTTTGAGGCCCTAACGCCCAATTTGC
TGGCACGTACCGTAGAGACAGTGGAGGGTGGAGGGTTAGTTGTGTTATTG
CTTCAATCGGTGGCGTCGCTTCGTCAGCTTTACACCATGAGCATGGACGT
GCATGCGCGCTTTCGTACCGAGGCCCACGGGGATGTGGTGGCCCGGTTTA
ACGAGCGTTTCATTCTGTCCTTGGGTGACTGTGACAGCTGCTTGGTGCTC
GACGACGAATTAAATGTGTTGCCAATATCGAAGAAGAGCCGGGCTTTAAC
AGCGCTGCCAGGGGCATTGGATGATGGGGTGTTGGCTGTGGCGGAGATGG
AGCTAAAGGAGCTCAAAGAGAGTGTATCAGAAATGCAACCTCTGGGCGCG
TTGGTGGGTGCGGCACGGACCGTGGATCAAGCACAGGCTGTGGTGTCATT
TTTGGATGCCGTGCAAAACAAAGCATTGCGGACAACGGTTAGTTTGACGG
CGTCCCGGGGGAGGGGAAAATCCGCGGCGGTTGGTCTATGCCTAGCGGGG
GCGATTGCGTTCGGCTACAGTAACATATATGTCACGGCCCCGTCGCCTGA
GAATTTGGAAACGGTATTTGATTTTGTGAAGCGGGGATTGGTGGCACTGA
AGTATCAGGAGCACTTGGATTTTGAGGTTGTTCAGGCGGGGCATCATCAG
GTGGGGCAGCAGGGAGGGGCGGATGCGAAGGCGACTGTGAGGGTTTCGGT
TTTTCGGGGTCATCGGCAGGTGGTGCAATATATTGCGCCGCATGAACACG
AAAAGTTATCCCAGGCAGAGTTGGTTGCGGTGGACGAGGCGGCTGCCATT
CCTTTGCCGTTGGTCAAGAAGTTGTTGGGGCCTTACTTGGTGTTCTTGTC
GTCGACTGTGACGGGGTACGAAGGGACGGGTCGCTCGCTTTCCCTTAAAT
TGGTGGCACAGCTCCGTGAGCAGCAGGGAAAAGCCACGGTGGGCACGCGA
AGTTTGAAGGAGGTGACATTGGAGTCGCCAATTCGATATGCGAGGGGGGA
TCCGGTTGAGAGGTGGTTGCACGAGGTCTTGTGCCTGGACGCACAAATTG
GCAATCATCGTATTGTCACTACCCTGCCGCCAGTCGGTGCCTGCCAGCTC
TACCAAGTGGATCGAGACACCCTTTTTGCCTACCACAAGGTCTCTGAAGC
CTTTCTCCAGCGAGTAATGGCTCTCTACACAGCAGCCCACTATAAAAACC
AACCCAACGACCTCCAACTGTTGTCCGATGCCCCCGCCCACCGCCTCTTC
GTCCTTCTTGGACCACCCGGCTCCTCCTCCTCCACCTCAGGCGTTCCCGA
TATTCTATGCGTCATCCAAGTCGCCCTCGAAGGCCGCATCTCCCAAGCTT
CTGTCCAAGCCTCCCTTGCTCGTGGCCATCGGGCGTCCGGTGATCTTATC
CCCTGGACTATGTCTCAACAATTTCAAGACAGCGAATTTGCCAAACTATC
GGGCGCCAGGATAGTGCGCATTGCCACACACCCGGATGCGCAAAAATTGG
GATATGGCACGAGGGCACTGAAATTGTTGCTTGAGCATTACTCGGGCAAG
GCTAGTAAGGAGCAAGTGGCGGTAGCAGTGATTGATGGAAAGGGGAAGAA
GGGGAAGAATCACGAGGAGGAGGAGAAGGAGGAGGAGAAGGAGGAGAAGA
AGGAGGAGGAGGAGGACGATGACGAAGCAAGAGAGAGCACGAAAAAGCTG
CGGCATGAGCGGGTGGCCCCGCGTAAGGAGCTCCCGCCCCTGCTGACGCG
TGTGGATGAGGTGAAGCACGCAGAGCGTTTGCATTGGGTTGGAACTTCAT
ATGGCTTGACCGAGAAATTACTTAATTTTTGGTCAAGACTCGGGATGCGT
ATGGTGTACTTACGACAGACTGCCAATGACTTGACAGGGGAACACACGGC
GATTATGCTCACGGCGTTGGACACGAAGGGGATGAAGGAAAATTCGCCCA
ATGCGGATTGGCTTGCGATGTTCGCGGCAGACGCCCTCAGGCGATTGGTA
AGTCTTTTGTCGTTTGAATTCAGGGAGCAGTTGGACACGGCGCTAGATCT
TGCGATTCTCGAGAATGTCCGCAGTGGTCTTCCCTCTCCGGGTCCTCCGA
TTACGGCGAAACAATTGGGCTACTTGCTGATTCCGAGGGATTTGGAACGA
CTACATTTGTACGCACGGAATTTGGCCGACTATCATTTGATCACCGACCT
CTTACCTACGCTTGCCCGAGTTTATTTTTTGAGAATGTTGCCAGCGAGTG
TGAGTTTATCGAAATTGATGGAGGCGATTTTAGTGGGACTGGGCTTGAGG
CACCGGACGGTGGATCAGCTTGCACGGGAGTTGGGGATAGATGGAGAGAC
CGTGCTGGCGATGTTTAATAAAGTGGTGAGAAAGATTGGGGCGAGCTTGA
AGGAGATTCAGGGGCAAGATGATGGAGGCGCGGTTGTACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGTATGAAAAAAATAAGAAGAAGAAAAAGGAAAA
GGACGCGTTGATGGCAGCACAACAAAAGCAGCATCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAA
GAGAGGGGGAAGATGGACAAGAAGCGTGGAGCAGCTGCGATTGGAGAAGC
GGCAAATGGGGTGACAAATGAACACCATGCCACCTCGGAAATGAAGCGCA
AGCACAGTCAGAGGGAAAGAGAGAAAGAGAAGGAGGATGCGAGCAAGGAG
GCTGCTGCCGCAGGGATGTCTGCAGAAGACGCGGGCACCGCGCCGAATAA
GGATAACAAAAAGAGGAGGAAGAAGATGAAGGAGAAGGGCAACACCAAGG
CGGACGTGGCGAAACCTGCCCCGCGGCAAGAGCGGAAGGGGGGGGGAAAG
GAAGAGGAAGACGGAATGTTGGTGGAAGTGGAAGATGAGGTCTCGCCTAA
CAAGAAGAGCAAAAAGCCTAAGAAGCATAAAAAGGAGAGACAGATGCATT
AA

Coding sequence (CDS) from alignment at chr12:521844..525245-

>NO12G01780.1 ID=NO12G01780.1|Name=NO12G01780.1|organism=Nannochloropsis oceanica|type=CDS|length=3402bp|location=Sequence derived from alignment at chr12:521844..525245- (Nannochloropsis oceanica)
ATGGTGCGCAAAAAGGTGGACGACCGTGTACGAACGCTGATCGAAAACGG
CGTAAAGTCACGGCATCGCTCGCTGCTTGTGCTTGTAGGAGATCATGGCA
AGGACCAGGTGGCGAATCTGCATTACATTCTGAGCCGGACCCAGGTCAAG
GCCCGACCCTCGGTCTTATGGTGCTACAAGAAGGAGCTGGGCTTCTCCAC
TCACCGCAAGAAGCGCATGCGGCAAATCAAGCGGAATGTGCAAAGGGGGT
TGCATGACCCAGACAAGGACGACCCGTTTGACTTGTTTGTCTCGTCCACT
AATATCCGATGGTGCTACTACAAGGAGACACATCGCATTTTGGGGCAGAC
GTTTGGCATGTGCGTGCTGCAGGACTTTGAGGCCCTAACGCCCAATTTGC
TGGCACGTACCGTAGAGACAGTGGAGGGTGGAGGGTTAGTTGTGTTATTG
CTTCAATCGGTGGCGTCGCTTCGTCAGCTTTACACCATGAGCATGGACGT
GCATGCGCGCTTTCGTACCGAGGCCCACGGGGATGTGGTGGCCCGGTTTA
ACGAGCGTTTCATTCTGTCCTTGGGTGACTGTGACAGCTGCTTGGTGCTC
GACGACGAATTAAATGTGTTGCCAATATCGAAGAAGAGCCGGGCTTTAAC
AGCGCTGCCAGGGGCATTGGATGATGGGGTGTTGGCTGTGGCGGAGATGG
AGCTAAAGGAGCTCAAAGAGAGTGTATCAGAAATGCAACCTCTGGGCGCG
TTGGTGGGTGCGGCACGGACCGTGGATCAAGCACAGGCTGTGGTGTCATT
TTTGGATGCCGTGCAAAACAAAGCATTGCGGACAACGGTTAGTTTGACGG
CGTCCCGGGGGAGGGGAAAATCCGCGGCGGTTGGTCTATGCCTAGCGGGG
GCGATTGCGTTCGGCTACAGTAACATATATGTCACGGCCCCGTCGCCTGA
GAATTTGGAAACGGTATTTGATTTTGTGAAGCGGGGATTGGTGGCACTGA
AGTATCAGGAGCACTTGGATTTTGAGGTTGTTCAGGCGGGGCATCATCAG
GTGGGGCAGCAGGGAGGGGCGGATGCGAAGGCGACTGTGAGGGTTTCGGT
TTTTCGGGGTCATCGGCAGGTGGTGCAATATATTGCGCCGCATGAACACG
AAAAGTTATCCCAGGCAGAGTTGGTTGCGGTGGACGAGGCGGCTGCCATT
CCTTTGCCGTTGGTCAAGAAGTTGTTGGGGCCTTACTTGGTGTTCTTGTC
GTCGACTGTGACGGGGTACGAAGGGACGGGTCGCTCGCTTTCCCTTAAAT
TGGTGGCACAGCTCCGTGAGCAGCAGGGAAAAGCCACGGTGGGCACGCGA
AGTTTGAAGGAGGTGACATTGGAGTCGCCAATTCGATATGCGAGGGGGGA
TCCGGTTGAGAGGTGGTTGCACGAGGTCTTGTGCCTGGACGCACAAATTG
GCAATCATCGTATTGTCACTACCCTGCCGCCAGTCGGTGCCTGCCAGCTC
TACCAAGTGGATCGAGACACCCTTTTTGCCTACCACAAGGTCTCTGAAGC
CTTTCTCCAGCGAGTAATGGCTCTCTACACAGCAGCCCACTATAAAAACC
AACCCAACGACCTCCAACTGTTGTCCGATGCCCCCGCCCACCGCCTCTTC
GTCCTTCTTGGACCACCCGGCTCCTCCTCCTCCACCTCAGGCGTTCCCGA
TATTCTATGCGTCATCCAAGTCGCCCTCGAAGGCCGCATCTCCCAAGCTT
CTGTCCAAGCCTCCCTTGCTCGTGGCCATCGGGCGTCCGGTGATCTTATC
CCCTGGACTATGTCTCAACAATTTCAAGACAGCGAATTTGCCAAACTATC
GGGCGCCAGGATAGTGCGCATTGCCACACACCCGGATGCGCAAAAATTGG
GATATGGCACGAGGGCACTGAAATTGTTGCTTGAGCATTACTCGGGCAAG
GCTAGTAAGGAGCAAGTGGCGGTAGCAGTGATTGATGGAAAGGGGAAGAA
GGGGAAGAATCACGAGGAGGAGGAGAAGGAGGAGGAGAAGGAGGAGAAGA
AGGAGGAGGAGGAGGACGATGACGAAGCAAGAGAGAGCACGAAAAAGCTG
CGGCATGAGCGGGTGGCCCCGCGTAAGGAGCTCCCGCCCCTGCTGACGCG
TGTGGATGAGGTGAAGCACGCAGAGCGTTTGCATTGGGTTGGAACTTCAT
ATGGCTTGACCGAGAAATTACTTAATTTTTGGTCAAGACTCGGGATGCGT
ATGGTGTACTTACGACAGACTGCCAATGACTTGACAGGGGAACACACGGC
GATTATGCTCACGGCGTTGGACACGAAGGGGATGAAGGAAAATTCGCCCA
ATGCGGATTGGCTTGCGATGTTCGCGGCAGACGCCCTCAGGCGATTGGTA
AGTCTTTTGTCGTTTGAATTCAGGGAGCAGTTGGACACGGCGCTAGATCT
TGCGATTCTCGAGAATGTCCGCAGTGGTCTTCCCTCTCCGGGTCCTCCGA
TTACGGCGAAACAATTGGGCTACTTGCTGATTCCGAGGGATTTGGAACGA
CTACATTTGTACGCACGGAATTTGGCCGACTATCATTTGATCACCGACCT
CTTACCTACGCTTGCCCGAGTTTATTTTTTGAGAATGTTGCCAGCGAGTG
TGAGTTTATCGAAATTGATGGAGGCGATTTTAGTGGGACTGGGCTTGAGG
CACCGGACGGTGGATCAGCTTGCACGGGAGTTGGGGATAGATGGAGAGAC
CGTGCTGGCGATGTTTAATAAAGTGGTGAGAAAGATTGGGGCGAGCTTGA
AGGAGATTCAGGGGCAAGATGATGGAGGCGCGGTTGTACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGTATGAAAAAAATAAGAAGAAGAAAAAGGAAAA
GGACGCGTTGATGGCAGCACAACAAAAGCAGCATCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAA
GAGAGGGGGAAGATGGACAAGAAGCGTGGAGCAGCTGCGATTGGAGAAGC
GGCAAATGGGGTGACAAATGAACACCATGCCACCTCGGAAATGAAGCGCA
AGCACAGTCAGAGGGAAAGAGAGAAAGAGAAGGAGGATGCGAGCAAGGAG
GCTGCTGCCGCAGGGATGTCTGCAGAAGACGCGGGCACCGCGCCGAATAA
GGATAACAAAAAGAGGAGGAAGAAGATGAAGGAGAAGGGCAACACCAAGG
CGGACGTGGCGAAACCTGCCCCGCGGCAAGAGCGGAAGGGGGGGGGAAAG
GAAGAGGAAGACGGAATGTTGGTGGAAGTGGAAGATGAGGTCTCGCCTAA
CAAGAAGAGCAAAAAGCCTAAGAAGCATAAAAAGGAGAGACAGATGCATT
AA

Synonyms

Publications