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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr12 | genome | chr12:481668..487614 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO12G01590.1 vs.
Match: XP_024578004.1 (atp-dependent dna helicase snf21 [Plasmopara halstedii]; CEG41635.1 atp-dependent dna helicase snf21 [Plasmopara halstedii]) HSP 1 Score: 813.1 bits (2099), Expect = 1.300e-231 Identity = 504/1109 (45.45%), Postives = 692/1109 (62.40%), Query Frame = 0
Query: 321 LSLLSTHKLHKEALNLMSLKQQRELWSQLLRWKDSKREGGRGERIEEWLPKLPEGIVVKQRTRRQ--SRNDVKKFQREQRKREVEREEARKKQLRNYLGKILGHRDEFFRFHKAKRADVRSCGAAVRRYWDGKERKVEREKESEERMRLMALRNNDMDEYIRLVETTKNERLNYLISQTDAYIVKIGDLVQ-------------AERGGREEEGGKEERGEGEGGLGGMSAKARSYYALTHRKMEEVSQPDMLKGGELKEYQMAGLQWMISLYNNQLSGILADEMGLGKTIQSIALLTYVMETKQNLGPFLIVVPLSTLSNWVNEFSKWAPDVLLVQYKGTPDERKAIWKEEMEAGLFNVLLTTYDFVMKDKATLKKFTWEYIIVDEGHRMKNTESKFAQTLGAFYTSKRRLLLTGTPLQNSLPELWSLLNFLLPTIFFSPDTFDTWFNKPFASYGGGRVEEGGVEEGAQISEEEKMLIISRLHELLRPFMLRRVKSAVLGQLPTKTEKVLRCELSGVQKRLYRQI---------TTKALQRKKGGREGGMMALSLNNIMMHLRKCCNHPFLFQ-DSYSINHSLVSASGKLELLDRILPKLKAAGHRVLLFSQMTSMLDVLGDYFDWRGYRFLRLDGTTAADEREERMYQFNASDSPFFIFALSTRAGGLGLNLATADTVIFYDSDWNPSMDSQAMDRAHRIGQKNEVRVFRLITNTSVEERILSRANEKSKITHLVVEAGKFNKDGREGGLGKDGERRAMVENLLRDVQELEEEEGGGEGEREGREEM---ALNEMMATSEDEFILYQKMDKEREEREEEEWREHLARKGLDPEKNPRPCRLAARLPVEEGGEEEEEDNEEDTEEESLRGKEVTE----EGLLLLARGRKRKEVSYADNMTEGQFMRAMEKRAAEEEA-----EKKKKRSKASAAAAAREERKKVLVALQPKVLELMLKTFNLIRGLKEEEEENGGEEVTVEGREGGKKRQRQITALFW-----------------------EKPPKNEFADYYELIKEPIDLKTIRARIKGGKEGGVYRSLAEFAKDFRTLVSNARLYNEEGSEVYNDAMKISRVFEDEYVKLQAFT 1370
+S L + H E L+ + R+L LL+ K +R + L P + K RR+ SR +++ +RE+RKR V E+ R+ + YL IL H EFF +HK +A + V+ + D K K ERE++ +E++RL AL+ NDM+ Y +LV KNERL YL+SQT++Y+ I LV+ A+ R ++GGKE+ + Y K E QP ML GG+LKEYQ+ GLQWM+SLY+N L+GILADEMGLGKTIQSI+LLTYV E K N GPFL+VVPLSTLSNWVNEF KWAPD++LV YKG P RK ++K+EM + FNVLLTTY+++MKDK L+K+ W+YIIVDEGHRMKN +SKFA TLG+ YTS+ RLLLTGTPLQNSLPELW+LLNFLLPTIF S DTF+ WF+KPFA + G + ++S+EE+MLII+RLH++LRPF+LRRVK++VL QLP K EKVL+CELSG QK +YR+I TT +KKG + + L+N++M LRK CNHP+LFQ + Y I+ +V +SGK ELLDR+LPKLKAAGHRVL+FSQMT ++ VL DYF++RG+R+LRLDG+T+ADERE+RM+ FNA DSPFFIF LSTRAGGLGLNLATADTVI +DSDWNP+MD+QA DRAHRIGQKNEVRVFRL+TN+ VEE+ILSRA +K + +LVVEAGKFN K+ +RRAM+E+L++ E EE G+ E + +NEMMA +++E +LY +D ER RE +EW E+ + + P +RL +E+ + ++ E + GK + + + + RKRKE+SY D T+ +F++ E E+E + K+ ++ + + + +R++ + P ++ +T N E+++G +R+R++ ++ EKP E+ DYY ++++P+DL TI+AR+ + Y S EF DF +V NA+LYN S V DA++I + + + L+ T
Sbjct: 660 VSSLDKLEKHAETLDENEQRTLRDLRCLLLQQK-LRRHVAKAHTTRLALLGEPSAVDRKSFRRRRPASRVELQSDEREKRKRSVAMEKKRRANHQMYLKAILNHSREFFAYHKNVKAQISKSAKNVKAFIDQKASKAEREEDRQEKLRLKALKANDMEAYGKLVAEAKNERLTYLLSQTNSYLDSIRKLVRQHKKKHHVVDEYTAQYDARYDDGGKEKNED--------DMDDDLNYLEIASKGELPRQPLMLVGGDLKEYQLRGLQWMVSLYDNHLNGILADEMGLGKTIQSISLLTYVTEVKHNHGPFLVVVPLSTLSNWVNEFKKWAPDLVLVVYKGAPQVRKELYKQEMASCQFNVLLTTYEYIMKDKHVLRKYGWQYIIVDEGHRMKNAQSKFAMTLGSMYTSRNRLLLTGTPLQNSLPELWALLNFLLPTIFESVDTFEQWFSKPFAQFSGN-------GDSNELSDEERMLIINRLHQVLRPFLLRRVKASVLDQLPDKVEKVLKCELSGWQKIMYRRIQEGGALLMETTDDAGKKKG--KAKYTSKGLSNVLMQLRKVCNHPYLFQTNGYQIDFDIVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNAPDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATDKMNMNNLVVEAGKFNNK------SKEADRRAMLESLIK--MEQEEAAHAAHGDDESSNVLLDDEINEMMALTDEELVLYNSLDVERNIREAKEWEEYCRQCNI-------PHFPRSRLMLEKDAPSWLREADDVMERDIASGKHDKDAWNVDMEAISGKPRKRKEMSYRDQFTDAEFVKMCEDGIDEKETKATTMDPKELKATTTKSIELKRKREEDKEFIDPHSIDFDDETLN--------EDDSG-------------RRERKMLCYYYKKVYDAVVKLKDPTGRLRSELYVEKPSAVEYPDYYTIVQQPMDLLTIKARL----DEYNYASHDEFEADFNLMVGNAQLYNHPESLVVLDALEIDKCVKTKMKPLRLKT 1710
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO12G01590.1 ID=NO12G01590.1|Name=NO12G01590.1|organism=Nannochloropsis oceanica|type=mRNA|length=5429bp
GGCCGCCTGTGTTGTGTTTGATGCATTGGATGGTGGGGTGTAGGAAGTTG
GTGGGTTGTGAGTGCATGCCTGATGCGGGGCAGCATGCCTGCGGAAGGCT
TTCAATCAAGAATCTATACGCTGTCGGCACACGTAACAGGGCGTGGTGCG
GCTTGATATTGTGGTAGATCAGGCAGAGAGGATGCAGGGCGTGGTGCGGC
TTGATATTGTGGCAGATCAGGCAGAGGGGACGCGGCTGATAGGGGGGATG
ATGGTGATGACGGGTCGATCTCACCGTCCCACCTCTACGCACAACAAAAC
CAAGGCTGGACCCGCGCTGCAGATACACTTCAGCATTTCACCCTCATTGA
ACGTGCGCTTGCGCGTTGTGGTTAGTGATTCGCGGTGTCTTGCCTGAGAA
CAGGGCGAAGACGACGACAGAGAAGGCATGAAATCGGCGAGGGCAACGTT
GTGATCAGGCTGCAACGGTGGGCCGACCCAAGTGGTCCGTGTCATCCCAT
GCTATTCGCCCCACCCTTGGCCCCTGCAGATCCTCCTCCTATCATTGCTT
ACCTGCATGTGTTGATGGGGTGATTATTGTCGTATTTGTGGATCTTGCAT
CTAAAGCAAGTCGTTATCATCATCACGCCCATGCCTGGCTCACACTCAGG
CTGTGGCATGTTCGTCCCCCACTCTCATTTCCCCCAGCTCGCCCCCTGTC
TTTCCCATTAGTCGTACACCACACAGAACTATAACACGTCTCAATTCACG
CTACGCAATGATAGGTCGTTACCACATACATTTATTTGCTATCTTCACGC
TATAACTTTTTTCCGCCTCTCAAATACAAAACAACCTAAGCAGGAGACTA
AAGCGCGCGCCAATTTTTTGTTTCGAGTGAGGCGGTGTTCCTGTGTGTGT
GGGTGAAGGCCCAGTCCACGAAAATGCATACGACAGGAAGTGATGGGGAC
GGCGAATACGGCGGCGGAGTTAGTCTTGTGTCTTCTTCGCGGGCCGCTGC
ACCTGAAGAAGACAAAAGTCAGCAGCACCGGAAGCAGCAAGAGCAGGAGG
ACAATGACAAAGAGGATGACGACGAGAGCGACACACAAAGCCACGCCTAC
GGCCAAGACAGCGATGAACAAGAAGCAAGTCAATGCGGGATGGGGCAGGG
GGAGGGCATGGAGGAAGAAAACAACAATGACGAGCAACACCAAGACCCCC
CCGGCTCGGTAGCCACCAGCGGCAGCGGGCCTCGCGCGGACGGTACGCCA
CCTATGACCTACTTTACGATCGTTGAGCCGCAAGAAAAGGATTCAGTAGG
GCTTAGTGGTGCTAATGCTGGTGCTGTGCGGGGGGCTCGACAGGCACGCA
ATCCCTTGAGCCGTGCAATTCACTTGCTGGGTGGACCTGTGTATCGTGCT
CCTGCTTCTGATAGAGGGGAACCGTATAGCATTTTGTACAACACGGCGGC
TTTTTTGGACCCAGCGGTGAAGGCCGACAAGGAGCATTACCAAAAGCAGC
ACCAGCACGTGGGGACTATCAGCACCGCGCCGCCCCGGACGGAGTGGGCT
CGGTTGTCCTTTGGCAGCTTTTCGGACGGCAGCAGCAGCAGTATTGGTAT
TGAAACGCCATGGGCGGCATGGGGTCCTTCGCTTCCGAAAGGGAGTTCGG
CTACACAAAGAATATCAGGAATGAATGCACCTGTCCTAGATTATGATGGC
TTGCAAGAAGGCGTGCAGCGGGAGAGGGAGAAGGGGCTAGAGAAGAGGAT
TGAGGAGGCGAAGGAATTATTGAAATTATATACGTACAGGTCGGCAAGGA
CGGTCGCTGGCTCTGCTGGCCGTGATGCTGCTGCTGCTCCTGCAGCTACA
ATTTCGGGTGGTAGGAGCAGCAGTAGCCATGCTCTGTCTCTCCTTTCTAC
GCATAAACTGCACAAAGAGGCTTTGAATCTGATGAGTCTCAAGCAACAAC
GCGAGCTGTGGTCTCAGCTATTGCGATGGAAGGACAGTAAGAGGGAGGGG
GGTAGGGGAGAACGAATAGAAGAATGGTTACCGAAACTCCCAGAGGGGAT
AGTGGTGAAGCAAAGGACGAGGAGGCAGAGTCGGAATGATGTGAAAAAGT
TTCAGAGAGAGCAGAGAAAAAGGGAGGTGGAGAGGGAGGAGGCGCGGAAG
AAGCAACTGAGAAATTATCTTGGAAAGATCCTGGGGCACCGAGATGAATT
CTTTCGGTTTCATAAGGCGAAACGGGCTGATGTGAGGAGTTGTGGAGCGG
CGGTGAGGAGGTACTGGGACGGGAAGGAGAGGAAGGTGGAGAGGGAGAAG
GAGAGCGAGGAGAGGATGAGGTTGATGGCGTTGCGGAATAACGACATGGA
CGAATATATTCGTTTGGTAGAGACGACGAAGAATGAGCGGCTGAATTATT
TGATTTCTCAGACGGATGCATACATCGTTAAGATCGGGGATTTGGTCCAA
GCAGAACGTGGCGGCAGGGAAGAGGAGGGAGGGAAGGAGGAACGGGGGGA
GGGAGAAGGGGGCTTGGGAGGGATGTCGGCCAAGGCACGGAGTTATTATG
CATTGACTCATCGGAAGATGGAGGAAGTATCCCAGCCGGATATGTTGAAA
GGAGGAGAACTGAAGGAGTATCAGATGGCGGGGTTGCAGTGGATGATCTC
GCTCTACAACAATCAATTGAGTGGAATCCTGGCAGATGAAATGGGTCTCG
GCAAGACCATCCAGTCGATCGCCCTCCTGACCTATGTAATGGAGACCAAG
CAGAACCTTGGCCCATTCCTCATCGTCGTCCCCCTCTCCACGCTTAGCAA
TTGGGTAAACGAGTTCTCTAAGTGGGCTCCTGACGTCTTATTGGTGCAGT
ACAAGGGCACGCCGGACGAGCGGAAAGCCATTTGGAAGGAGGAAATGGAG
GCCGGGCTATTCAATGTGTTACTAACCACCTACGACTTCGTCATGAAAGA
CAAAGCCACCCTCAAGAAATTTACATGGGAATATATCATCGTCGACGAGG
GCCACCGGATGAAAAACACCGAATCCAAATTCGCACAGACACTAGGCGCA
TTCTACACGTCCAAGCGCCGCCTTCTTCTAACGGGGACACCGCTCCAAAA
TTCTCTACCTGAGTTATGGTCGTTGCTGAATTTTCTGCTGCCGACAATTT
TCTTTAGCCCTGATACGTTTGATACCTGGTTCAACAAGCCCTTCGCCTCC
TATGGCGGGGGGAGGGTGGAGGAGGGAGGGGTGGAAGAAGGGGCGCAGAT
AAGTGAGGAGGAGAAGATGTTGATTATATCGAGATTGCATGAGTTGTTGA
GACCTTTTATGCTTCGAAGGGTGAAGAGCGCGGTGCTAGGGCAGCTGCCC
ACGAAGACGGAGAAAGTGCTGAGGTGTGAGCTGAGCGGGGTACAAAAGAG
GCTGTATCGGCAGATCACGACGAAGGCACTGCAGAGGAAGAAGGGAGGGA
GGGAGGGGGGGATGATGGCGTTGAGTTTGAATAACATCATGATGCACCTG
CGGAAGTGCTGCAATCACCCCTTTTTATTCCAGGATTCATACTCCATAAA
CCATTCCTTGGTTTCAGCGTCGGGAAAGCTTGAGTTGCTCGACCGTATCT
TGCCGAAGCTAAAGGCGGCGGGCCATCGCGTGTTGTTGTTTTCACAAATG
ACGAGCATGCTCGATGTACTGGGGGATTACTTTGATTGGAGGGGGTACCG
GTTTTTGAGGCTCGATGGCACCACGGCGGCCGATGAGAGGGAAGAGAGGA
TGTACCAATTTAATGCGAGCGACAGTCCGTTTTTCATTTTCGCCCTGTCC
ACACGCGCGGGGGGCTTGGGTCTTAATCTCGCCACTGCGGACACGGTTAT
ATTTTATGACTCGGATTGGAACCCCTCGATGGACTCCCAGGCCATGGACA
GGGCGCATCGGATCGGCCAAAAAAATGAAGTGAGGGTCTTTCGGCTAATT
ACCAATACGTCTGTGGAGGAGAGAATCTTGAGTCGGGCGAATGAGAAGAG
CAAGATAACACATTTGGTGGTTGAGGCTGGAAAGTTCAACAAGGATGGGA
GGGAGGGAGGGCTGGGGAAAGATGGGGAGAGACGAGCGATGGTTGAGAAC
CTGTTGAGGGACGTCCAGGAATTGGAGGAGGAGGAAGGGGGTGGGGAGGG
AGAGAGGGAGGGGAGGGAGGAGATGGCATTGAATGAAATGATGGCAACGA
GTGAGGATGAGTTTATTTTGTACCAGAAGATGGATAAGGAGAGGGAGGAG
AGGGAGGAGGAGGAATGGAGGGAGCATTTAGCCAGAAAGGGCTTGGATCC
CGAAAAGAATCCGAGGCCTTGCCGGTTGGCAGCACGCTTGCCCGTGGAGG
AAGGGGGGGAGGAGGAAGAGGAGGATAATGAGGAGGATACGGAGGAGGAG
TCACTGAGAGGGAAGGAAGTGACTGAGGAGGGCTTATTGTTGTTGGCAAG
GGGAAGGAAGAGGAAGGAGGTGTCGTACGCGGATAACATGACAGAAGGGC
AATTCATGAGGGCAATGGAAAAGAGAGCAGCGGAGGAGGAGGCCGAGAAG
AAGAAGAAGAGGAGCAAGGCCTCTGCGGCGGCAGCTGCGCGAGAGGAAAG
GAAGAAGGTATTGGTGGCGTTGCAGCCGAAGGTGCTGGAATTGATGTTAA
AGACGTTTAACTTGATTCGAGGGTTGAAGGAGGAAGAAGAAGAGAACGGG
GGGGAAGAAGTGACGGTGGAAGGGAGGGAGGGCGGAAAGAAGAGGCAAAG
ACAAATCACAGCCTTGTTTTGGGAGAAACCACCCAAAAACGAATTTGCTG
ATTACTACGAATTGATCAAGGAACCGATAGATTTGAAGACGATTCGGGCA
AGGATCAAGGGAGGGAAGGAGGGAGGGGTGTATCGGAGCTTGGCGGAGTT
TGCCAAGGACTTTCGGACGTTGGTTTCGAACGCGCGTTTGTATAATGAGG
AAGGGAGTGAGGTCTACAACGATGCTATGAAAATAAGCCGTGTCTTTGAA
GATGAATACGTTAAGCTTCAGGCATTTACAGCGACCCTTCCTCACCAAAT
CCCTCCTCCTCTTCCTCTACTCGTGGATGGAAGGGGGAAGAAGGAAGGGG
AGGGAAGGAAGGAGAATGGATCGGTGGGACATACGAAAGTTAAAAAGGCC
AAAAAGGAGATGAAGGATGGGAAGGGTGGAATTGGATTGGGAGGGGGGTC
GGCCACGGGGAGGTTGACGGGCATCGTCGGAGGAAGTATGTACGATTGTG
GGGATTTTTAATTTTGGGATGGAGGCGTCGAGGTAGAGAGGAAGGAAGGA
GGGAAGGGCGGGTTGGGACTGCATAATTGTGAATAGTCATTGTAAATTGG
ATGCCCTGTCCTCTACGGCAAAATGGGCGAGGAGAAAGGAGCGCAAAGTA
CTTTAAACTGAAGCGTTTTCGATACTGGA back to topprotein sequence of NO12G01590.1 >NO12G01590.1-protein ID=NO12G01590.1-protein|Name=NO12G01590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1446bp
MHTTGSDGDGEYGGGVSLVSSSRAAAPEEDKSQQHRKQQEQEDNDKEDDD
ESDTQSHAYGQDSDEQEASQCGMGQGEGMEEENNNDEQHQDPPGSVATSG
SGPRADGTPPMTYFTIVEPQEKDSVGLSGANAGAVRGARQARNPLSRAIH
LLGGPVYRAPASDRGEPYSILYNTAAFLDPAVKADKEHYQKQHQHVGTIS
TAPPRTEWARLSFGSFSDGSSSSIGIETPWAAWGPSLPKGSSATQRISGM
NAPVLDYDGLQEGVQREREKGLEKRIEEAKELLKLYTYRSARTVAGSAGR
DAAAAPAATISGGRSSSSHALSLLSTHKLHKEALNLMSLKQQRELWSQLL
RWKDSKREGGRGERIEEWLPKLPEGIVVKQRTRRQSRNDVKKFQREQRKR
EVEREEARKKQLRNYLGKILGHRDEFFRFHKAKRADVRSCGAAVRRYWDG
KERKVEREKESEERMRLMALRNNDMDEYIRLVETTKNERLNYLISQTDAY
IVKIGDLVQAERGGREEEGGKEERGEGEGGLGGMSAKARSYYALTHRKME
EVSQPDMLKGGELKEYQMAGLQWMISLYNNQLSGILADEMGLGKTIQSIA
LLTYVMETKQNLGPFLIVVPLSTLSNWVNEFSKWAPDVLLVQYKGTPDER
KAIWKEEMEAGLFNVLLTTYDFVMKDKATLKKFTWEYIIVDEGHRMKNTE
SKFAQTLGAFYTSKRRLLLTGTPLQNSLPELWSLLNFLLPTIFFSPDTFD
TWFNKPFASYGGGRVEEGGVEEGAQISEEEKMLIISRLHELLRPFMLRRV
KSAVLGQLPTKTEKVLRCELSGVQKRLYRQITTKALQRKKGGREGGMMAL
SLNNIMMHLRKCCNHPFLFQDSYSINHSLVSASGKLELLDRILPKLKAAG
HRVLLFSQMTSMLDVLGDYFDWRGYRFLRLDGTTAADEREERMYQFNASD
SPFFIFALSTRAGGLGLNLATADTVIFYDSDWNPSMDSQAMDRAHRIGQK
NEVRVFRLITNTSVEERILSRANEKSKITHLVVEAGKFNKDGREGGLGKD
GERRAMVENLLRDVQELEEEEGGGEGEREGREEMALNEMMATSEDEFILY
QKMDKEREEREEEEWREHLARKGLDPEKNPRPCRLAARLPVEEGGEEEEE
DNEEDTEEESLRGKEVTEEGLLLLARGRKRKEVSYADNMTEGQFMRAMEK
RAAEEEAEKKKKRSKASAAAAAREERKKVLVALQPKVLELMLKTFNLIRG
LKEEEEENGGEEVTVEGREGGKKRQRQITALFWEKPPKNEFADYYELIKE
PIDLKTIRARIKGGKEGGVYRSLAEFAKDFRTLVSNARLYNEEGSEVYND
AMKISRVFEDEYVKLQAFTATLPHQIPPPLPLLVDGRGKKEGEGRKENGS
VGHTKVKKAKKEMKDGKGGIGLGGGSATGRLTGIVGGSMYDCGDF* back to topmRNA from alignment at chr12:481668..487614+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO12G01590.1 ID=NO12G01590.1|Name=NO12G01590.1|organism=Nannochloropsis oceanica|type=mRNA|length=5947bp|location=Sequence derived from alignment at chr12:481668..487614+ (Nannochloropsis oceanica)
GGCCGCCTGTGTTGTGTTTGATGCATTGGATGGTGGGGTGTAGGAAGTTG
GTGGGTTGTGAGTGCATGCCTGATGCGGGGCAGCATGCCTGCGGAAGGCT
TTCAATCAAGAATCTATACGCTGTCGGCACACGTAACAGGGCGTGGTGCG
GCTTGATATTGTGGTAGATCAGGCAGAGAGGATGCAGGGCGTGGTGCGGC
TTGATATTGTGGCAGATCAGGCAGAGGGGACGCGGCTGATAGGGGGGATG
ATGGTGATGACGGGTCGATCTCACCGTCCCACCTCTACGCACAACAAAAC
CAAGGCTGGACCCGCGCTGCAGATACACTTCAGCATTTCACCCTCATTGA
ACGTGCGCTTGCGCGTTGTGGTTAGTGATTCGCGGTGTCTTGCCTGAGAA
CAGGGCGAAGACGACGACAGAGAAGGCATGAAATCGGCGAGGGCAACGTT
GTGATCAGGCTGCAACGGTGGGCCGACCCAAGTGGTCCGTGTCATCCCAT
GCTATTCGCCCCACCCTTGGCCCCTGCAGATCCTCCTCCTATCATTGCTT
ACCTGCATGTGTTGATGGGGTGATTATTGTCGTATTTGTGGATCTTGCAT
CTAAAGCAAGTCGTTATCATCATCACGCCCATGCCTGGCTCACACTCAGG
CTGTGGCATGTTCGTCCCCCACTCTCATTTCCCCCAGCTCGCCCCCTGTC
TTTCCCATTAGTCGTACACCACACAGAACTATAACACGTCTCAATTCACG
CTACGCAATGATAGGTCGTTACCACATACATTTATTTGCTATCTTCACGC
TATAACTTTTTTCCGCCTCTCAAATACAAAACAACCTAAGCAGGAGACTA
AAGCGCGCGCCAATTTTTTGTTTCGAGTGAGGCGGTGTTCCTGTGTGTGT
GGGTGAAGGCCCAGTCCACGAAAATGCATACGACAGGAAGTGATGGGGAC
GGCGAATACGGCGGCGGAGTTAGTCTTGTGTCTTCTTCGCGGGCCGCTGC
ACCTGAAGAAGACAAAAGTCAGCAGCACCGGAAGCAGCAAGAGCAGGAGG
ACAATGACAAAGAGGATGACGACGAGAGCGACACACAAAGCCACGCCTAC
GGCCAAGACAGCGATGAACAAGAAGCAAGTCAATGCGGGATGGGGCAGGG
GGAGGGCATGGAGGAAGAAAACAACAATGACGAGCAACACCAAGACCCCC
CCGGCTCGGTAGCCACCAGCGGCAGCGGGCCTCGCGCGGACGGTACGCCA
CCTATGACCTACTTTACGATCGTTGAGCCGCAAGAAAAGGATTCAGTAGG
GCTTAGTGGTGCTAATGCTGGTGCTGTGCGGGGGGCTCGACAGGCACGCA
ATCCCTTGAGCCGTGCAATTCACTTGCTGGGTGGACCTGTGTATCGTGCT
CCTGCTTCTGATAGAGGGGAACCGTATAGCATTTTGTACAACACGGCGGC
TTTTTTGGACCCAGCGGTGAAGGCCGACAAGGAGCATTACCAAAAGCAGC
ACCAGCACGTGGGGACTATCAGCACCGCGCCGCCCCGGACGGAGTGGGCT
CGGTTGTCCTTTGGCAGCTTTTCGGACGGCAGCAGCAGCAGTATTGGTAT
TGAAACGCCATGGGCGGCATGGGGTCCTTCGCTTCCGAAAGGGAGTTCGG
CTACACAAAGAATATCAGGAATGAATGCACCTGTCCTAGATTATGATGGC
TTGCAAGAAGGCGTGCAGCGGGAGAGGGAGAAGGGGCTAGAGAAGAGGAT
TGAGGAGGCGAAGGAATTATTGAAATTATATACGTACAGGTCGGCAAGGA
CGGTCGCTGGCTCTGCTGGCCGTGATGCTGCTGCTGCTCCTGCAGCTACA
ATTTCGGGTGGTAGGAGCAGCAGTAGCCATGCTCTGTCTCTCCTTTCTAC
GCATAAACTGCACAAAGAGGCTTTGAATCTGATGAGTCTCAAGCAACAAC
GCGAGCTGTGGTCTCAGCTATTGCGATGGAAGGACAGTAAGAGGGAGGGG
GGTAGGGGAGAACGAATAGAAGAATGGTTACCGAAACTCCCAGAGGGGAT
AGTGGTGAAGCAAAGGACGAGGAGGCAGAGTCGGAATGATGTGAAAAAGT
TTCAGAGAGAGCAGAGAAAAAGGGAGGTGGAGAGGGAGGAGGCGCGGAAG
AAGCAACTGAGAAATTATCTTGGAAAGATCCTGGGGCACCGAGATGAATT
CTTTCGGTTTCATAAGGCGAAACGGGCTGATGTGAGGAGTTGTGGAGCGG
CGGTGAGGAGGTACTGGGACGGGAAGGAGAGGAAGGTGGAGAGGGAGAAG
GAGAGCGAGGAGAGGATGAGGTTGATGGCGTTGCGGAATAACGACATGGA
CGAATATATTCGTTTGGTAGAGACGACGAAGAATGAGCGGCTGAATTATT
TGATTTCTCAGACGGATGCATACATCGTTAAGATCGGGGATTTGGTCCAA
GCAGAACGTGGCGGCAGGGAAGAGGAGGGAGGGAAGGAGGAACGGGGGGA
GGGAGAAGGGGGCTTGGGAGGGATGTCGGCCAAGGCACGGAGTTATTATG
CATTGACTCATCGGAAGATGGAGGAAGTATCCCAGCCGGATATGTTGAAA
GGAGGAGAACTGAAGGAGTATCAGATGGCGGGGTTGCAGTGGATGATCTC
GCTCTACAACAATCAATTGAGTGGAATCCTGGCAGATGAAATGGTAAGCC
CTCTCTCCCTCCTTCCTTTTCTTCTTTCCTCCTTTTCCTCCTTCTTACAT
CCGTCTTTTTCAATTTTCCGTCACCTTACCGATCCTCCCTTCCTTTCCCG
CTCCCTCCCTCTCTCTCTCTCCTCCCCTTTCGTCCAGGGTCTCGGCAAGA
CCATCCAGTCGATCGCCCTCCTGACCTATGTAATGGAGACCAAGCAGAAC
CTTGGCCCATTCCTCATCGTCGTCCCCCTCTCCACGCTTAGCAATTGGGT
AGGTATGAATGGAAGGAACGAGGGAAGGAAGGAGAGTGGGGGGCGTGCCC
GAGACGGGGATGGCTTCACACCACTTGCATATCTACTTTATCCTACCTAT
CTCTCTCCTTTCAACCTTCCAGGTAAACGAGTTCTCTAAGTGGGCTCCTG
ACGTCTTATTGGTGCAGTACAAGGGCACGCCGGACGAGCGGAAAGCCATT
TGGAAGGAGGAAATGGAGGCCGGGCTATTCAATGTGTTGTAAGTCATTCT
TATATTAGTTTATTTAATGTTGTTAAGCAGAATCTCCTTGATATCTTACA
AAAGATAACATCCTTCACCCACATCAGCTGCATACGCTTACTTTTTCTCA
TCCCCCCGAGGCTATTCACCAACGGCATCTTCGCCCTGTAGACGTTCATC
GCATTTTTAAAAAACGCCCAAACCTCCTTTCACGCCTTCCCTCCGCTCCC
ATCCCCTCCTTCGTCCAAACCTCCCTCCTCTACCCCAGACTAACCACCTA
CGACTTCGTCATGAAAGACAAAGCCACCCTCAAGAAATTTACATGGGAAT
ATATCATCGTCGACGAGGGCCACCGGATGAAAAACACCGAATCCAAATTC
GCACAGACACTAGGCGCATTCTACACGTCCAAGCGCCGCCTTCTTCTAAC
GGGGACACCGCTCCAAAATTCTCTACCTGAGTTATGGTCGTTGCTGAATT
TTCTGCTGCCGACAATTTTCTTTAGCCCTGATACGTTTGATACCTGGTTC
AACAAGCCCTTCGCCTCCTATGGCGGGGGGAGGGTGGAGGAGGGAGGGGT
GGAAGAAGGGGCGCAGATAAGTGAGGAGGAGAAGATGTTGATTATATCGA
GATTGCATGAGTTGTTGAGACCTTTTATGCTTCGAAGGGTGAAGAGCGCG
GTGCTAGGGCAGCTGCCCACGAAGACGGAGAAAGTGCTGAGGTGTGAGCT
GAGCGGGGTACAAAAGAGGCTGTATCGGCAGATCACGACGAAGGCACTGC
AGAGGAAGAAGGGAGGGAGGGAGGGGGGGATGATGGCGTTGAGTTTGAAT
AACATCATGATGCACCTGCGGAAGTGCTGCAATCACCCCTTTTTATTCCA
GGATTCATACTCCATAAACCATTCCTTGGTTTCAGCGTCGGGAAAGCTTG
AGTTGCTCGACCGTATCTTGCCGAAGCTAAAGGCGGCGGGCCATCGCGTG
TTGTTGTTTTCACAAATGACGAGCATGCTCGATGTACTGGGGGATTACTT
TGATTGGAGGGGGTACCGGTTTTTGAGGCTCGATGGCACCACGGCGGCCG
ATGAGAGGGAAGAGAGGATGTACCAATTTAATGCGAGCGACAGTCCGTTT
TTCATTTTCGCCCTGTCCACACGCGCGGGGGGCTTGGGTCTTAATCTCGC
CACTGCGGACACGGTTATATTTTATGACTCGGATTGGAACCCCTCGATGG
ACTCCCAGGCCATGGACAGGGCGCATCGGATCGGCCAAAAAAATGAAGTG
AGGGTCTTTCGGCTAATTACCAATACGTCTGTGGAGGAGAGAATCTTGAG
TCGGGCGAATGAGAAGAGCAAGATAACACATTTGGTGGTTGAGGCTGGAA
AGTTCAACAAGGATGGGAGGGAGGGAGGGCTGGGGAAAGATGGGGAGAGA
CGAGCGATGGTTGAGAACCTGTTGAGGGACGTCCAGGAATTGGAGGAGGA
GGAAGGGGGTGGGGAGGGAGAGAGGGAGGGGAGGGAGGAGATGGCATTGA
ATGAAATGATGGCAACGAGTGAGGATGAGTTTATTTTGTACCAGAAGATG
GATAAGGAGAGGGAGGAGAGGGAGGAGGAGGAATGGAGGGAGCATTTAGC
CAGAAAGGGCTTGGATCCCGAAAAGAATCCGAGGCCTTGCCGGTTGGCAG
CACGCTTGCCCGTGGAGGAAGGGGGGGAGGAGGAAGAGGAGGATAATGAG
GAGGATACGGAGGAGGAGTCACTGAGAGGGAAGGAAGTGACTGAGGAGGG
CTTATTGTTGTTGGCAAGGGGAAGGAAGAGGAAGGAGGTGTCGTACGCGG
ATAACATGACAGAAGGGCAATTCATGAGGGCAATGGAAAAGAGAGCAGCG
GAGGAGGAGGCCGAGAAGAAGAAGAAGAGGAGCAAGGCCTCTGCGGCGGC
AGCTGCGCGAGAGGAAAGGAAGAAGGTATTGGTGGCGTTGCAGCCGAAGG
TGCTGGAATTGATGTTAAAGACGTTTAACTTGATTCGAGGGTTGAAGGAG
GAAGAAGAAGAGAACGGGGGGGAAGAAGTGACGGTGGAAGGGAGGGAGGG
CGGAAAGAAGAGGCAAAGACAAATCACAGCCTTGTTTTGGGAGAAACCAC
CCAAAAACGAATTTGCTGATTACTACGAATTGATCAAGGAACCGATAGAT
TTGAAGACGATTCGGGCAAGGATCAAGGGAGGGAAGGAGGGAGGGGTGTA
TCGGAGCTTGGCGGAGTTTGCCAAGGACTTTCGGACGTTGGTTTCGAACG
CGCGTTTGTATAATGAGGAAGGGAGTGAGGTCTACAACGATGCTATGAAA
ATAAGCCGTGTCTTTGAAGATGAATACGTTAAGCTTCAGGCATTTACAGC
GACCCTTCCTCACCAAATCCCTCCTCCTCTTCCTCTACTCGTGGATGGAA
GGGGGAAGAAGGAAGGGGAGGGAAGGAAGGAGAATGGATCGGTGGGACAT
ACGAAAGTTAAAAAGGCCAAAAAGGAGATGAAGGATGGGAAGGGTGGAAT
TGGATTGGGAGGGGGGTCGGCCACGGGGAGGTTGACGGGCATCGTCGGAG
GAAGTATGTACGATTGTGGGGATTTTTAATTTTGGGATGGAGGCGTCGAG
GTAGAGAGGAAGGAAGGAGGGAAGGGCGGGTTGGGACTGCATAATTGTGA
ATAGTCATTGTAAATTGGATGCCCTGTCCTCTACGGCAAAATGGGCGAGG
AGAAAGGAGCGCAAAGTACTTTAAACTGAAGCGTTTTCGATACTGGA back to topCoding sequence (CDS) from alignment at chr12:481668..487614+ >NO12G01590.1 ID=NO12G01590.1|Name=NO12G01590.1|organism=Nannochloropsis oceanica|type=CDS|length=4338bp|location=Sequence derived from alignment at chr12:481668..487614+ (Nannochloropsis oceanica)
ATGCATACGACAGGAAGTGATGGGGACGGCGAATACGGCGGCGGAGTTAG
TCTTGTGTCTTCTTCGCGGGCCGCTGCACCTGAAGAAGACAAAAGTCAGC
AGCACCGGAAGCAGCAAGAGCAGGAGGACAATGACAAAGAGGATGACGAC
GAGAGCGACACACAAAGCCACGCCTACGGCCAAGACAGCGATGAACAAGA
AGCAAGTCAATGCGGGATGGGGCAGGGGGAGGGCATGGAGGAAGAAAACA
ACAATGACGAGCAACACCAAGACCCCCCCGGCTCGGTAGCCACCAGCGGC
AGCGGGCCTCGCGCGGACGGTACGCCACCTATGACCTACTTTACGATCGT
TGAGCCGCAAGAAAAGGATTCAGTAGGGCTTAGTGGTGCTAATGCTGGTG
CTGTGCGGGGGGCTCGACAGGCACGCAATCCCTTGAGCCGTGCAATTCAC
TTGCTGGGTGGACCTGTGTATCGTGCTCCTGCTTCTGATAGAGGGGAACC
GTATAGCATTTTGTACAACACGGCGGCTTTTTTGGACCCAGCGGTGAAGG
CCGACAAGGAGCATTACCAAAAGCAGCACCAGCACGTGGGGACTATCAGC
ACCGCGCCGCCCCGGACGGAGTGGGCTCGGTTGTCCTTTGGCAGCTTTTC
GGACGGCAGCAGCAGCAGTATTGGTATTGAAACGCCATGGGCGGCATGGG
GTCCTTCGCTTCCGAAAGGGAGTTCGGCTACACAAAGAATATCAGGAATG
AATGCACCTGTCCTAGATTATGATGGCTTGCAAGAAGGCGTGCAGCGGGA
GAGGGAGAAGGGGCTAGAGAAGAGGATTGAGGAGGCGAAGGAATTATTGA
AATTATATACGTACAGGTCGGCAAGGACGGTCGCTGGCTCTGCTGGCCGT
GATGCTGCTGCTGCTCCTGCAGCTACAATTTCGGGTGGTAGGAGCAGCAG
TAGCCATGCTCTGTCTCTCCTTTCTACGCATAAACTGCACAAAGAGGCTT
TGAATCTGATGAGTCTCAAGCAACAACGCGAGCTGTGGTCTCAGCTATTG
CGATGGAAGGACAGTAAGAGGGAGGGGGGTAGGGGAGAACGAATAGAAGA
ATGGTTACCGAAACTCCCAGAGGGGATAGTGGTGAAGCAAAGGACGAGGA
GGCAGAGTCGGAATGATGTGAAAAAGTTTCAGAGAGAGCAGAGAAAAAGG
GAGGTGGAGAGGGAGGAGGCGCGGAAGAAGCAACTGAGAAATTATCTTGG
AAAGATCCTGGGGCACCGAGATGAATTCTTTCGGTTTCATAAGGCGAAAC
GGGCTGATGTGAGGAGTTGTGGAGCGGCGGTGAGGAGGTACTGGGACGGG
AAGGAGAGGAAGGTGGAGAGGGAGAAGGAGAGCGAGGAGAGGATGAGGTT
GATGGCGTTGCGGAATAACGACATGGACGAATATATTCGTTTGGTAGAGA
CGACGAAGAATGAGCGGCTGAATTATTTGATTTCTCAGACGGATGCATAC
ATCGTTAAGATCGGGGATTTGGTCCAAGCAGAACGTGGCGGCAGGGAAGA
GGAGGGAGGGAAGGAGGAACGGGGGGAGGGAGAAGGGGGCTTGGGAGGGA
TGTCGGCCAAGGCACGGAGTTATTATGCATTGACTCATCGGAAGATGGAG
GAAGTATCCCAGCCGGATATGTTGAAAGGAGGAGAACTGAAGGAGTATCA
GATGGCGGGGTTGCAGTGGATGATCTCGCTCTACAACAATCAATTGAGTG
GAATCCTGGCAGATGAAATGGGTCTCGGCAAGACCATCCAGTCGATCGCC
CTCCTGACCTATGTAATGGAGACCAAGCAGAACCTTGGCCCATTCCTCAT
CGTCGTCCCCCTCTCCACGCTTAGCAATTGGGTAAACGAGTTCTCTAAGT
GGGCTCCTGACGTCTTATTGGTGCAGTACAAGGGCACGCCGGACGAGCGG
AAAGCCATTTGGAAGGAGGAAATGGAGGCCGGGCTATTCAATGTGTTACT
AACCACCTACGACTTCGTCATGAAAGACAAAGCCACCCTCAAGAAATTTA
CATGGGAATATATCATCGTCGACGAGGGCCACCGGATGAAAAACACCGAA
TCCAAATTCGCACAGACACTAGGCGCATTCTACACGTCCAAGCGCCGCCT
TCTTCTAACGGGGACACCGCTCCAAAATTCTCTACCTGAGTTATGGTCGT
TGCTGAATTTTCTGCTGCCGACAATTTTCTTTAGCCCTGATACGTTTGAT
ACCTGGTTCAACAAGCCCTTCGCCTCCTATGGCGGGGGGAGGGTGGAGGA
GGGAGGGGTGGAAGAAGGGGCGCAGATAAGTGAGGAGGAGAAGATGTTGA
TTATATCGAGATTGCATGAGTTGTTGAGACCTTTTATGCTTCGAAGGGTG
AAGAGCGCGGTGCTAGGGCAGCTGCCCACGAAGACGGAGAAAGTGCTGAG
GTGTGAGCTGAGCGGGGTACAAAAGAGGCTGTATCGGCAGATCACGACGA
AGGCACTGCAGAGGAAGAAGGGAGGGAGGGAGGGGGGGATGATGGCGTTG
AGTTTGAATAACATCATGATGCACCTGCGGAAGTGCTGCAATCACCCCTT
TTTATTCCAGGATTCATACTCCATAAACCATTCCTTGGTTTCAGCGTCGG
GAAAGCTTGAGTTGCTCGACCGTATCTTGCCGAAGCTAAAGGCGGCGGGC
CATCGCGTGTTGTTGTTTTCACAAATGACGAGCATGCTCGATGTACTGGG
GGATTACTTTGATTGGAGGGGGTACCGGTTTTTGAGGCTCGATGGCACCA
CGGCGGCCGATGAGAGGGAAGAGAGGATGTACCAATTTAATGCGAGCGAC
AGTCCGTTTTTCATTTTCGCCCTGTCCACACGCGCGGGGGGCTTGGGTCT
TAATCTCGCCACTGCGGACACGGTTATATTTTATGACTCGGATTGGAACC
CCTCGATGGACTCCCAGGCCATGGACAGGGCGCATCGGATCGGCCAAAAA
AATGAAGTGAGGGTCTTTCGGCTAATTACCAATACGTCTGTGGAGGAGAG
AATCTTGAGTCGGGCGAATGAGAAGAGCAAGATAACACATTTGGTGGTTG
AGGCTGGAAAGTTCAACAAGGATGGGAGGGAGGGAGGGCTGGGGAAAGAT
GGGGAGAGACGAGCGATGGTTGAGAACCTGTTGAGGGACGTCCAGGAATT
GGAGGAGGAGGAAGGGGGTGGGGAGGGAGAGAGGGAGGGGAGGGAGGAGA
TGGCATTGAATGAAATGATGGCAACGAGTGAGGATGAGTTTATTTTGTAC
CAGAAGATGGATAAGGAGAGGGAGGAGAGGGAGGAGGAGGAATGGAGGGA
GCATTTAGCCAGAAAGGGCTTGGATCCCGAAAAGAATCCGAGGCCTTGCC
GGTTGGCAGCACGCTTGCCCGTGGAGGAAGGGGGGGAGGAGGAAGAGGAG
GATAATGAGGAGGATACGGAGGAGGAGTCACTGAGAGGGAAGGAAGTGAC
TGAGGAGGGCTTATTGTTGTTGGCAAGGGGAAGGAAGAGGAAGGAGGTGT
CGTACGCGGATAACATGACAGAAGGGCAATTCATGAGGGCAATGGAAAAG
AGAGCAGCGGAGGAGGAGGCCGAGAAGAAGAAGAAGAGGAGCAAGGCCTC
TGCGGCGGCAGCTGCGCGAGAGGAAAGGAAGAAGGTATTGGTGGCGTTGC
AGCCGAAGGTGCTGGAATTGATGTTAAAGACGTTTAACTTGATTCGAGGG
TTGAAGGAGGAAGAAGAAGAGAACGGGGGGGAAGAAGTGACGGTGGAAGG
GAGGGAGGGCGGAAAGAAGAGGCAAAGACAAATCACAGCCTTGTTTTGGG
AGAAACCACCCAAAAACGAATTTGCTGATTACTACGAATTGATCAAGGAA
CCGATAGATTTGAAGACGATTCGGGCAAGGATCAAGGGAGGGAAGGAGGG
AGGGGTGTATCGGAGCTTGGCGGAGTTTGCCAAGGACTTTCGGACGTTGG
TTTCGAACGCGCGTTTGTATAATGAGGAAGGGAGTGAGGTCTACAACGAT
GCTATGAAAATAAGCCGTGTCTTTGAAGATGAATACGTTAAGCTTCAGGC
ATTTACAGCGACCCTTCCTCACCAAATCCCTCCTCCTCTTCCTCTACTCG
TGGATGGAAGGGGGAAGAAGGAAGGGGAGGGAAGGAAGGAGAATGGATCG
GTGGGACATACGAAAGTTAAAAAGGCCAAAAAGGAGATGAAGGATGGGAA
GGGTGGAATTGGATTGGGAGGGGGGTCGGCCACGGGGAGGTTGACGGGCA
TCGTCGGAGGAAGTATGTACGATTGTGGGGATTTTTAA back to top
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