NO12G00890.1, NO12G00890.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G00890.1
Unique Name	NO12G00890.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3794
Alignment location	chr12:290480..294489 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:290480..294489 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO12G00890.1 vs.
Match: EWM25926.1 (serine threonine-protein kinase 4 [Nannochloropsis gaditana])

HSP 1 Score: 645.2 bits (1663), Expect = 2.400e-181
Identity = 407/726 (56.06%), Postives = 474/726 (65.29%), Query Frame = 0

Query:    1 MDEDNIIFSPEDPNEVYELVDLLGEGSYGAVYRAQYKADPSKPPVAVKIVPADEDLSSLKREIAILSRCTSPFVVAFKDCYFVDAEIWIIMEFCMGGSVADMLDATQHVLSEPQIRAICASAALGLAYLHEHHNIHRDLKAGNILLSLDGKAKLADFGVSATLNNTMSKRKTVIGTPFWMAPEVIQEISYDGKADIWSLGITAIEMAEGMPPHFNVHPMRAIFLIPSKPPPMLASPPPSLPSSSSSSPSPSLWSQDFHDFLSVCLVKDPNLRADAATLLQHPFLKADVDFLLANPSLGLSPIRDLVSSALEALAKYRQNTIPALPPSLPLEEQFEKTGVLELMEEAEEGEEGGREGGGEERKMRPVSLSTVSAGSSRERGREEGRKGGEGTLLRGPAQGPWLSQSGSSMMRSDAKGGREEGREGGHGPQWQRESGQGHHMDTLVRPVIARVRGKEGEEDC--PLRLWE-------LQVQEEQHQQRWRQGGARSSVDVSQAGTMVRHRIRPMSGPCGGDDGAAAGAGERDGGGARARKSNAGGAWEGGKEGLKEDGTLQIKSGADGSSRGGGGEGGGEGRQESNSGLQSAWRYLRGLSMGGKGSTGGEGEAGMAAPMLVNGVSSALETAGRRDGPTGGDAGGSRSRNSSSDSNSTLKKSVIVESSSSSSLSSLYHDRKLRELKGATREEVREMLRGLEGQFEADVMALEEAYVQQKKQLEEALSQC 718
            MDE NIIFS +DPNEVYELVDLLGEGSYGAVYRAQYKADPSKPPVAVKI+PA+EDLSSLKREIAIL++C S +VV FKDC+FVDAEIWIIMEFCMGGSVADMLDATQ  LSEPQIR+ICA AALGLAYLH++HNIHRDLKAGNILLS++GKAKLADFGVSATLN++MSKRKTVIGTP+WMAPEVIQEISYDGKAD+WSLGITAIEMAEGMPPHFNVHPMRAIFLIPSKPPP LA       S+S  SP    WSQ+FHDFLSVCLVKDPN RA+AA LL HPFLKADVDFL A P+ GL+PI DLV S LE LA YR+++I A P   PLEEQF +T  LE   E E G  G   G               S G+S   GR      GE TL+RGP  G   S   SS   S   GGR    EG  G + +       + +TLV      V  K+ +++    LRLW+       +Q QE+QH      G ARSS+D+S  GT+VRHR  P         GAA         G R  K   GG          ED TL + SGA GS R   G GG     E+NSGLQSA RYL+GLS+  +       E   A+     G++S  E   R           +  +  S+   S L+KS +  + +S+     YHD K+R++   TREE++ M+R LE Q++ D  ALEEAY  QKK LE+AL +C
Sbjct:    1 MDEHNIIFSQQDPNEVYELVDLLGEGSYGAVYRAQYKADPSKPPVAVKIIPAEEDLSSLKREIAILNQCKSEYVVEFKDCFFVDAEIWIIMEFCMGGSVADMLDATQRTLSEPQIRSICACAALGLAYLHDNHNIHRDLKAGNILLSMNGKAKLADFGVSATLNHSMSKRKTVIGTPYWMAPEVIQEISYDGKADVWSLGITAIEMAEGMPPHFNVHPMRAIFLIPSKPPPQLAQR-----STSGQSP----WSQEFHDFLSVCLVKDPNQRANAAALLTHPFLKADVDFLRARPAQGLAPIADLVGSTLEILASYRRSSIAAAPT--PLEEQFARTRPLEEDGEEENGGTGKEHG---------------SRGTSGSVGRLRDGGAGENTLVRGPMMGRRFSHRQSSGSGSSHAGGRRMLEEGQPGIEGRNRD----NCETLVARTKVDVEEKDVKDEDWEQLRLWDRRQHQGVVQEQEDQH------GKARSSMDISCTGTVVRHRPSP---------GAA---------GLRRGKEAEGG----------EDATLMVASGA-GSPRDMQGRGGHHA-PEANSGLQSAMRYLQGLSLSRRSGRSATRERESASTSEEKGLTSGQERGSR----------ATADQRKSTSETSFLRKSAVPNNGNSN-----YHDCKMRDVAEMTREELQAMIRALESQYDMDATALEEAYTYQKKYLEDALRRC 645

The following BLAST results are available for this feature:

BLAST of NO12G00890.1 vs.

BLAST of NO12G00890.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25926.1	2.400e-181	56.06	serine threonine-protein kinase 4 [Nannochloropsis...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G00890	NO12G00890	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00890.1	NO12G00890.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00890.1.cds1	NO12G00890.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00890.1.cds2	NO12G00890.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:290480..294489-
coding sequence from alignment at chr12:290480..294489-

mRNA sequence

>NO12G00890.1 ID=NO12G00890.1|Name=NO12G00890.1|organism=Nannochloropsis oceanica|type=mRNA|length=3794bp
GCAGGATACTGTATGTGGTACTGTGTATGTTTCATGGGCGTAATGTGAGA
GGGATATCGATTGATGATGAGGATGGAAGCAAAGAAGGCATCTTGCCAAG
AGGGCGAAGCGGCAGAAGCCTCTGCCTCCGAGAGAAGACGTTATTCGTGG
TTGGTGCTCTTGCCTCCTCTTTCAATGCGATGCAATGCCTGCCAAACGCA
CTCCACAACTTCCATCAAAGTTTGCACAGATCTCTTTAATTGCTACTGAT
TGTACGGCCTGTCTGGTCTTTGCTTTTCCGTGTGCGGATGTCCCCTCGTT
CTGGCATCGCCAGTCGCATCGAATTTCAAAGTGTGGGCCGCCAACGCTTC
CTTGCACTAGACAGAGACATCGCCTGGAGATAACCTCACGCACGTCTCCA
CCTTTATCTTACAGGCCGTCGAGGAGCTGGGGTATATTCGTTGCTGTGCC
CTGCCTTACTGTAGGTCTCGTTTTGGACCCTGCACGTCAAGCTCTCCGGT
ATAGTAGCCGCTGCCGCCGCAAGACGCCATAACACAAGGGACCCTCTTTC
CCCCTACACCACCTATATACCACCATAAGCAGCAGCACCATCACTACGAT
CAGCGCCTACTCTGTCCCCCTTTCACCTCGACCATTACCACGCTCTTCCT
CTCGCTCCGTAGCGAAATCACCCCACACCCTGCCCCAATCACATAATGGA
CGAAGACAACATTATCTTCTCCCCTGAAGACCCCAACGAGGTTTATGAAC
TAGTCGACCTACTCGGGGAAGGTTCTTATGGCGCGGTTTACCGAGCCCAG
TACAAAGCCGACCCGTCCAAACCCCCCGTGGCCGTTAAAATCGTGCCTGC
AGACGAAGACCTGTCGAGCCTGAAACGCGAGATTGCCATCTTGAGCCGAT
GCACGAGTCCCTTCGTGGTCGCTTTCAAAGACTGTTATTTCGTCGATGCC
GAGATATGGATCATCATGGAGTTCTGTATGGGTGGGTCAGTTGCCGACAT
GCTTGATGCCACGCAACACGTCCTCTCCGAGCCCCAAATCCGAGCTATCT
GTGCCAGCGCTGCTCTCGGCCTTGCCTACCTGCACGAGCACCACAACATT
CACCGGGACCTCAAGGCGGGAAATATTCTCCTTTCCTTAGATGGAAAAGC
AAAATTGGCCGATTTCGGTGTGTCCGCAACACTGAACAACACGATGAGCA
AACGCAAGACTGTCATTGGGACGCCCTTCTGGATGGCGCCGGAGGTGATC
CAAGAAATTTCCTATGATGGTAAAGCCGACATTTGGTCCTTGGGCATCAC
GGCCATCGAGATGGCGGAAGGCATGCCCCCGCATTTTAATGTCCACCCCA
TGCGAGCTATCTTCCTCATCCCCTCCAAACCCCCACCCATGCTTGCCTCC
CCCCCTCCTTCCCTCCCTTCCTCCTCCTCGTCCTCCCCCTCTCCTTCTCT
CTGGTCGCAAGACTTCCACGATTTCCTCTCCGTCTGCCTGGTGAAAGATC
CAAACCTGCGAGCAGATGCCGCCACCTTGCTCCAGCACCCTTTCCTCAAG
GCTGATGTTGATTTCCTCCTGGCCAATCCCTCCCTTGGTCTCTCCCCCAT
TCGAGACCTCGTTTCCTCTGCCCTAGAGGCCCTGGCGAAGTACCGTCAGA
ACACCATCCCGGCCCTTCCGCCCTCCCTCCCCCTTGAAGAGCAATTCGAG
AAGACGGGGGTGTTGGAGCTGATGGAGGAGGCGGAGGAGGGGGAGGAGGG
AGGAAGGGAGGGAGGGGGAGAGGAGAGGAAGATGCGCCCGGTAAGTCTGT
CGACGGTATCGGCGGGTTCTTCTCGAGAAAGAGGAAGGGAGGAAGGGAGA
AAAGGAGGGGAGGGTACTTTGTTGCGCGGCCCTGCGCAAGGCCCTTGGCT
GAGTCAGAGCGGCAGTAGCATGATGAGGAGTGATGCGAAGGGAGGGAGGG
AGGAGGGGAGGGAGGGAGGGCATGGTCCCCAATGGCAGCGGGAATCCGGT
CAAGGGCATCATATGGACACGCTGGTGCGGCCGGTAATCGCCCGCGTGAG
GGGAAAGGAGGGAGAGGAGGACTGCCCCTTACGCCTGTGGGAACTACAGG
TGCAGGAGGAGCAGCATCAGCAGCGGTGGCGGCAGGGAGGAGCTAGGTCC
TCGGTTGATGTTTCTCAGGCGGGGACGATGGTGAGGCATCGGATTCGGCC
AATGTCAGGTCCGTGCGGTGGTGATGATGGTGCTGCTGCTGGTGCTGGTG
AGAGGGATGGGGGGGGGGCGAGGGCGAGGAAAAGTAACGCGGGCGGAGCA
TGGGAGGGAGGGAAGGAGGGATTGAAGGAGGATGGCACGTTACAAATCAA
GTCCGGGGCGGATGGCTCTTCCCGTGGAGGAGGAGGAGAGGGAGGGGGGG
AGGGAAGACAGGAGAGTAATTCGGGCTTGCAATCTGCATGGAGGTATTTA
CGGGGTTTGTCGATGGGGGGGAAAGGGAGCACTGGGGGAGAGGGAGAGGC
GGGGATGGCGGCGCCGATGCTGGTGAATGGCGTGTCATCAGCGCTGGAGA
CGGCGGGAAGAAGGGATGGGCCGACCGGAGGAGATGCAGGGGGTAGCAGG
AGCAGAAACAGCAGCAGTGATAGCAACAGCACTTTGAAAAAGAGTGTGAT
CGTGGAGTCTTCTTCCTCCTCTTCCTTGTCCTCGCTTTATCACGACCGGA
AGCTGAGGGAATTGAAGGGGGCAACACGGGAGGAAGTCAGGGAGATGCTG
CGGGGCTTGGAAGGACAGTTTGAAGCCGACGTGATGGCACTGGAAGAGGC
TTACGTCCAGCAGAAGAAGCAATTGGAGGAGGCCTTGAGCCAGTGCAATT
AAGGGAGTGGAGGCAGCGAGGGAAAGGATGGTAAGGGCGATAGAGTTTGT
GTAACACTACCATAGCACGGTAGTGGGTGTCAAGGGAGAAGATCGAGATT
CCCCTGGTTTGTGTCCTGGCTCTATCTTCCTCACTTGTAGGCATGCATGT
ATGCATTTCTAAACGTAGTAGAAGCCGTCTGGCTATGCATTTTGTATCTA
ATTCTTGAAGTTGGAAGAAGTCGTAATAATCTACGCTGTTCATTGTAGTC
GTCCGCCTGACGCTCTCTTCGGCGTCAGGATTTCCCACATATTTTCTGTC
TTATCACCATATATATATATAATGAAACACATTAAAACCACTCACAATCG
ATACACCACGTGGAAATGTCGTTTCTTTTGAGTCACGTCAGGAATAGGTG
GATTCTGCCTCGAATGGGGTAATTTCATCCACGAAAATGGGCTCTTCACA
GGCACAATGTTTCTCGTGATCCGTACGACAATCAGGCAGTCTCTCAATTG
CAGCTCTGTTTTTTATGTGACATCGACAAAATGAATAGGACCCCTTTCCA
CGGAGATCAAGAAGAAGAGTGTGCGTCTAATTCAGAATCATAAGCTCTCT
GCCAAACCCGCCAACAATAAGCCCTTACAAGCTCCCATATGGTCGTCCAC
AAGCCCTGTCTTATTTCACTTTTTGTATGCATGACCTCACCACAGATTCA
TTTAAGGCGTGCGAGCACCTCATGCTGGTCTTCTGTTCTCCCGCACAATC
ACCAAACAACCATGTGCGCTCCAAAAGAAACTGCCACAGCCAGTTAACCA
GCTGCTCCACCTGATTGTTAGCTTTTAAACTGCATGAAAATAAATCAGCC
AAAGTTCTAAGAGGATTACTCGGAGCGTGCACGAAGGGAAAAGAGCCTCA
ACGGCTCATATAATCAGTATTTTTATCTTCATCTCTACCTCCCC

protein sequence of NO12G00890.1

>NO12G00890.1-protein ID=NO12G00890.1-protein|Name=NO12G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=719bp
MDEDNIIFSPEDPNEVYELVDLLGEGSYGAVYRAQYKADPSKPPVAVKIV
PADEDLSSLKREIAILSRCTSPFVVAFKDCYFVDAEIWIIMEFCMGGSVA
DMLDATQHVLSEPQIRAICASAALGLAYLHEHHNIHRDLKAGNILLSLDG
KAKLADFGVSATLNNTMSKRKTVIGTPFWMAPEVIQEISYDGKADIWSLG
ITAIEMAEGMPPHFNVHPMRAIFLIPSKPPPMLASPPPSLPSSSSSSPSP
SLWSQDFHDFLSVCLVKDPNLRADAATLLQHPFLKADVDFLLANPSLGLS
PIRDLVSSALEALAKYRQNTIPALPPSLPLEEQFEKTGVLELMEEAEEGE
EGGREGGGEERKMRPVSLSTVSAGSSRERGREEGRKGGEGTLLRGPAQGP
WLSQSGSSMMRSDAKGGREEGREGGHGPQWQRESGQGHHMDTLVRPVIAR
VRGKEGEEDCPLRLWELQVQEEQHQQRWRQGGARSSVDVSQAGTMVRHRI
RPMSGPCGGDDGAAAGAGERDGGGARARKSNAGGAWEGGKEGLKEDGTLQ
IKSGADGSSRGGGGEGGGEGRQESNSGLQSAWRYLRGLSMGGKGSTGGEG
EAGMAAPMLVNGVSSALETAGRRDGPTGGDAGGSRSRNSSSDSNSTLKKS
VIVESSSSSSLSSLYHDRKLRELKGATREEVREMLRGLEGQFEADVMALE
EAYVQQKKQLEEALSQCN*

mRNA from alignment at chr12:290480..294489-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G00890.1 ID=NO12G00890.1|Name=NO12G00890.1|organism=Nannochloropsis oceanica|type=mRNA|length=4010bp|location=Sequence derived from alignment at chr12:290480..294489- (Nannochloropsis oceanica)
GCAGGATACTGTATGTGGTACTGTGTATGTTTCATGGGCGTAATGTGAGA
GGGATATCGATTGATGATGAGGATGGAAGCAAAGAAGGCATCTTGCCAAG
AGGGCGAAGCGGCAGAAGCCTCTGCCTCCGAGAGAAGACGTTATTCGTGG
TTGGTGCTCTTGCCTCCTCTTTCAATGCGATGCAATGCCTGCCAAACGCA
CTCCACAACTTCCATCAAAGTTTGCACAGATCTCTTTAATTGCTACTGAT
TGTACGGCCTGTCTGGTCTTTGCTTTTCCGTGTGCGGATGTCCCCTCGTT
CTGGCATCGCCAGTCGCATCGAATTTCAAAGTGTGGGCCGCCAACGCTTC
CTTGCACTAGACAGAGACATCGCCTGGAGATAACCTCACGCACGTCTCCA
CCTTTATCTTACAGGCCGTCGAGGAGCTGGGGTATATTCGTTGCTGTGCC
CTGCCTTACTGTAGGTCTCGTTTTGGACCCTGCACGTCAAGCTCTCCGGT
ATAGTAGCCGCTGCCGCCGCAAGACGCCATAACACAAGGGACCCTCTTTC
CCCCTACACCACCTATATACCACCATAAGCAGCAGCACCATCACTACGAT
CAGCGCCTACTCTGTCCCCCTTTCACCTCGACCATTACCACGCTCTTCCT
CTCGCTCCGTAGCGAAATCACCCCACACCCTGCCCCAATCACATAATGGA
CGAAGACAACATTATCTTCTCCCCTGAAGACCCCAACGAGGTTTATGAAC
TAGTCGACCTACTCGGGGAAGGTTCTTATGGCGCGGTTTACCGAGCCCAG
TACAAAGCCGACCCGTCCAAACCCCCCGTGGCCGTTAAAATCGTGCCTGC
AGACGAAGACCTGTCGAGCCTGAAACGCGAGATTGCCATCTTGAGCCGAT
GCACGAGTCCCTTCGTGGTCGCTTTCAAAGACTGTTATTTCGTCGATGCC
GAGATATGGATCATCATGGAGTTCTGTATGGGTGGGTCAGTTGCCGACAT
GCTTGATGCCACGCAACACGTCCTCTCCGAGCCCCAAATCCGAGCTATCT
GTGCCAGCGCTGCTCTCGGCCTTGCCTACCTGCACGAGCACCACAACATT
CACCGGGACCTCAAGGCGGGAAATATTCTCCTTTCCTTAGATGGAAAAGC
AAAATTGGCCGATTTCGGTGTGTCCGCAACACTGAACAACACGATGAGCA
AACGCAAGACTGTCATTGGGACGCCCTTCTGGATGGCGCCGGAGGTGATC
CAAGAAATTTCCTATGATGGTAAAGCCGACATTTGGTCCTTGGGCATCAC
GGCCATCGAGATGGCGGAAGGCATGCCCCCGCATTTTAATGTCCACCCCA
TGTGCGTAGCCTGTCTGTCGGCCACCCTTGCCCCCCTCCTTCCCTCCCTC
CCACCCTTCCTCCTTCCTTCCCCTTTCTGGGTCACCTCTGAAGTGGTGCA
CGAAGTTTTCCTACCGCCTTCCTCCCTCCCTTCTTCTCTCTCTCCTTCCA
GACGTCTCTTGCCACATGTCTAACTCACCTTTTTCCCCCCTCCTTCCCTC
CTTCCCTCCCTCCGCAGGCGAGCTATCTTCCTCATCCCCTCCAAACCCCC
ACCCATGCTTGCCTCCCCCCCTCCTTCCCTCCCTTCCTCCTCCTCGTCCT
CCCCCTCTCCTTCTCTCTGGTCGCAAGACTTCCACGATTTCCTCTCCGTC
TGCCTGGTGAAAGATCCAAACCTGCGAGCAGATGCCGCCACCTTGCTCCA
GCACCCTTTCCTCAAGGCTGATGTTGATTTCCTCCTGGCCAATCCCTCCC
TTGGTCTCTCCCCCATTCGAGACCTCGTTTCCTCTGCCCTAGAGGCCCTG
GCGAAGTACCGTCAGAACACCATCCCGGCCCTTCCGCCCTCCCTCCCCCT
TGAAGAGCAATTCGAGAAGACGGGGGTGTTGGAGCTGATGGAGGAGGCGG
AGGAGGGGGAGGAGGGAGGAAGGGAGGGAGGGGGAGAGGAGAGGAAGATG
CGCCCGGTAAGTCTGTCGACGGTATCGGCGGGTTCTTCTCGAGAAAGAGG
AAGGGAGGAAGGGAGAAAAGGAGGGGAGGGTACTTTGTTGCGCGGCCCTG
CGCAAGGCCCTTGGCTGAGTCAGAGCGGCAGTAGCATGATGAGGAGTGAT
GCGAAGGGAGGGAGGGAGGAGGGGAGGGAGGGAGGGCATGGTCCCCAATG
GCAGCGGGAATCCGGTCAAGGGCATCATATGGACACGCTGGTGCGGCCGG
TAATCGCCCGCGTGAGGGGAAAGGAGGGAGAGGAGGACTGCCCCTTACGC
CTGTGGGAACTACAGGTGCAGGAGGAGCAGCATCAGCAGCGGTGGCGGCA
GGGAGGAGCTAGGTCCTCGGTTGATGTTTCTCAGGCGGGGACGATGGTGA
GGCATCGGATTCGGCCAATGTCAGGTCCGTGCGGTGGTGATGATGGTGCT
GCTGCTGGTGCTGGTGAGAGGGATGGGGGGGGGGCGAGGGCGAGGAAAAG
TAACGCGGGCGGAGCATGGGAGGGAGGGAAGGAGGGATTGAAGGAGGATG
GCACGTTACAAATCAAGTCCGGGGCGGATGGCTCTTCCCGTGGAGGAGGA
GGAGAGGGAGGGGGGGAGGGAAGACAGGAGAGTAATTCGGGCTTGCAATC
TGCATGGAGGTATTTACGGGGTTTGTCGATGGGGGGGAAAGGGAGCACTG
GGGGAGAGGGAGAGGCGGGGATGGCGGCGCCGATGCTGGTGAATGGCGTG
TCATCAGCGCTGGAGACGGCGGGAAGAAGGGATGGGCCGACCGGAGGAGA
TGCAGGGGGTAGCAGGAGCAGAAACAGCAGCAGTGATAGCAACAGCACTT
TGAAAAAGAGTGTGATCGTGGAGTCTTCTTCCTCCTCTTCCTTGTCCTCG
CTTTATCACGACCGGAAGCTGAGGGAATTGAAGGGGGCAACACGGGAGGA
AGTCAGGGAGATGCTGCGGGGCTTGGAAGGACAGTTTGAAGCCGACGTGA
TGGCACTGGAAGAGGCTTACGTCCAGCAGAAGAAGCAATTGGAGGAGGCC
TTGAGCCAGTGCAATTAAGGGAGTGGAGGCAGCGAGGGAAAGGATGGTAA
GGGCGATAGAGTTTGTGTAACACTACCATAGCACGGTAGTGGGTGTCAAG
GGAGAAGATCGAGATTCCCCTGGTTTGTGTCCTGGCTCTATCTTCCTCAC
TTGTAGGCATGCATGTATGCATTTCTAAACGTAGTAGAAGCCGTCTGGCT
ATGCATTTTGTATCTAATTCTTGAAGTTGGAAGAAGTCGTAATAATCTAC
GCTGTTCATTGTAGTCGTCCGCCTGACGCTCTCTTCGGCGTCAGGATTTC
CCACATATTTTCTGTCTTATCACCATATATATATATAATGAAACACATTA
AAACCACTCACAATCGATACACCACGTGGAAATGTCGTTTCTTTTGAGTC
ACGTCAGGAATAGGTGGATTCTGCCTCGAATGGGGTAATTTCATCCACGA
AAATGGGCTCTTCACAGGCACAATGTTTCTCGTGATCCGTACGACAATCA
GGCAGTCTCTCAATTGCAGCTCTGTTTTTTATGTGACATCGACAAAATGA
ATAGGACCCCTTTCCACGGAGATCAAGAAGAAGAGTGTGCGTCTAATTCA
GAATCATAAGCTCTCTGCCAAACCCGCCAACAATAAGCCCTTACAAGCTC
CCATATGGTCGTCCACAAGCCCTGTCTTATTTCACTTTTTGTATGCATGA
CCTCACCACAGATTCATTTAAGGCGTGCGAGCACCTCATGCTGGTCTTCT
GTTCTCCCGCACAATCACCAAACAACCATGTGCGCTCCAAAAGAAACTGC
CACAGCCAGTTAACCAGCTGCTCCACCTGATTGTTAGCTTTTAAACTGCA
TGAAAATAAATCAGCCAAAGTTCTAAGAGGATTACTCGGAGCGTGCACGA
AGGGAAAAGAGCCTCAACGGCTCATATAATCAGTATTTTTATCTTCATCT
CTACCTCCCC

Coding sequence (CDS) from alignment at chr12:290480..294489-

>NO12G00890.1 ID=NO12G00890.1|Name=NO12G00890.1|organism=Nannochloropsis oceanica|type=CDS|length=2157bp|location=Sequence derived from alignment at chr12:290480..294489- (Nannochloropsis oceanica)
ATGGACGAAGACAACATTATCTTCTCCCCTGAAGACCCCAACGAGGTTTA
TGAACTAGTCGACCTACTCGGGGAAGGTTCTTATGGCGCGGTTTACCGAG
CCCAGTACAAAGCCGACCCGTCCAAACCCCCCGTGGCCGTTAAAATCGTG
CCTGCAGACGAAGACCTGTCGAGCCTGAAACGCGAGATTGCCATCTTGAG
CCGATGCACGAGTCCCTTCGTGGTCGCTTTCAAAGACTGTTATTTCGTCG
ATGCCGAGATATGGATCATCATGGAGTTCTGTATGGGTGGGTCAGTTGCC
GACATGCTTGATGCCACGCAACACGTCCTCTCCGAGCCCCAAATCCGAGC
TATCTGTGCCAGCGCTGCTCTCGGCCTTGCCTACCTGCACGAGCACCACA
ACATTCACCGGGACCTCAAGGCGGGAAATATTCTCCTTTCCTTAGATGGA
AAAGCAAAATTGGCCGATTTCGGTGTGTCCGCAACACTGAACAACACGAT
GAGCAAACGCAAGACTGTCATTGGGACGCCCTTCTGGATGGCGCCGGAGG
TGATCCAAGAAATTTCCTATGATGGTAAAGCCGACATTTGGTCCTTGGGC
ATCACGGCCATCGAGATGGCGGAAGGCATGCCCCCGCATTTTAATGTCCA
CCCCATGCGAGCTATCTTCCTCATCCCCTCCAAACCCCCACCCATGCTTG
CCTCCCCCCCTCCTTCCCTCCCTTCCTCCTCCTCGTCCTCCCCCTCTCCT
TCTCTCTGGTCGCAAGACTTCCACGATTTCCTCTCCGTCTGCCTGGTGAA
AGATCCAAACCTGCGAGCAGATGCCGCCACCTTGCTCCAGCACCCTTTCC
TCAAGGCTGATGTTGATTTCCTCCTGGCCAATCCCTCCCTTGGTCTCTCC
CCCATTCGAGACCTCGTTTCCTCTGCCCTAGAGGCCCTGGCGAAGTACCG
TCAGAACACCATCCCGGCCCTTCCGCCCTCCCTCCCCCTTGAAGAGCAAT
TCGAGAAGACGGGGGTGTTGGAGCTGATGGAGGAGGCGGAGGAGGGGGAG
GAGGGAGGAAGGGAGGGAGGGGGAGAGGAGAGGAAGATGCGCCCGGTAAG
TCTGTCGACGGTATCGGCGGGTTCTTCTCGAGAAAGAGGAAGGGAGGAAG
GGAGAAAAGGAGGGGAGGGTACTTTGTTGCGCGGCCCTGCGCAAGGCCCT
TGGCTGAGTCAGAGCGGCAGTAGCATGATGAGGAGTGATGCGAAGGGAGG
GAGGGAGGAGGGGAGGGAGGGAGGGCATGGTCCCCAATGGCAGCGGGAAT
CCGGTCAAGGGCATCATATGGACACGCTGGTGCGGCCGGTAATCGCCCGC
GTGAGGGGAAAGGAGGGAGAGGAGGACTGCCCCTTACGCCTGTGGGAACT
ACAGGTGCAGGAGGAGCAGCATCAGCAGCGGTGGCGGCAGGGAGGAGCTA
GGTCCTCGGTTGATGTTTCTCAGGCGGGGACGATGGTGAGGCATCGGATT
CGGCCAATGTCAGGTCCGTGCGGTGGTGATGATGGTGCTGCTGCTGGTGC
TGGTGAGAGGGATGGGGGGGGGGCGAGGGCGAGGAAAAGTAACGCGGGCG
GAGCATGGGAGGGAGGGAAGGAGGGATTGAAGGAGGATGGCACGTTACAA
ATCAAGTCCGGGGCGGATGGCTCTTCCCGTGGAGGAGGAGGAGAGGGAGG
GGGGGAGGGAAGACAGGAGAGTAATTCGGGCTTGCAATCTGCATGGAGGT
ATTTACGGGGTTTGTCGATGGGGGGGAAAGGGAGCACTGGGGGAGAGGGA
GAGGCGGGGATGGCGGCGCCGATGCTGGTGAATGGCGTGTCATCAGCGCT
GGAGACGGCGGGAAGAAGGGATGGGCCGACCGGAGGAGATGCAGGGGGTA
GCAGGAGCAGAAACAGCAGCAGTGATAGCAACAGCACTTTGAAAAAGAGT
GTGATCGTGGAGTCTTCTTCCTCCTCTTCCTTGTCCTCGCTTTATCACGA
CCGGAAGCTGAGGGAATTGAAGGGGGCAACACGGGAGGAAGTCAGGGAGA
TGCTGCGGGGCTTGGAAGGACAGTTTGAAGCCGACGTGATGGCACTGGAA
GAGGCTTACGTCCAGCAGAAGAAGCAATTGGAGGAGGCCTTGAGCCAGTG
CAATTAA

Synonyms

Publications