NO12G00440.1, NO12G00440.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO12G00440.1
Unique NameNO12G00440.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4067
Alignment locationchr12:153059..159841 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:153059..159841 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO12G00440.1 vs.
Match: GAX17250.1 (cycloartenol synthase [Fistulifera solaris])

HSP 1 Score: 862.8 bits (2228), Expect = 9.100e-247
Identity = 434/831 (52.23%), Postives = 544/831 (65.46%), Query Frame = 0
Query:   94 IYSTFYARPT-SYPGGPRTHRQDRRASWTKRVTTLPAG---WVFSHAEESHGVTQRHYQNMLGGEVPLTGEAAGRQMWYY----------DGKMAQALARVGKKNAEYSFSAAVNPNSADKVFRTQQISKWKGAMPDP---KLRPKTAGEAARKGMSYYQMLQCEDGHWAGDYGGPMFLMPGLIFACYITKTP---LGKEREEAMQAYLKNHQQEDGGWGLHIESPSSMFGTVMSYVSLRLLGLPASDPTCTAAHAFIQEHGGAVMAPSWCKFWLAVLGLHEWEGINSVPAEMWLLPRWFPFHPGRLWCHCRMVYLPMCYLYCRRFS-ADAAADPLLLALRHELYVTPYHDIAWDGERHACSDLDVYDPVSGLMKFLQNCLSYYERAPWL-------WLRKKGTDFAIAYIHAEDQQTNYVDIGPVNKTLNMLCVF--AEGGKEAEAFKRHVGRLDDYLWLAEDGMKMQGYNGSQCWDTSFLVQAMADGGLVEAFPQAMRKAYSYLDRTQIKADE----------DEASY---WFRHISKGGWPFSTAAHGWPIADCTAEGLKGVLALMDAPCVVEG----GVPLIPPSRLEDAMHILLSYQNGDGGWATYENNRGWGWFELLNPSEVFGDIMIDYSYVELTSAVMTAMHKFNKRFPNHRSKEITRAIASGARFIRSIQRPDGSWYGSWGICFTYGTWFGIEGLIAAGEDPATSPSIRRALGFLLAHQQANGGWGESYLSCVDKAYPEDGTGQTLGEGGSGVVQTAWAVLGLLAGKCEDKEAMERGVRFLMAQQQEDGDWGQEGITGVFNRNCGITYSQYRNIFPLWALGR 878
            ++ T Y  P  S PGGPR HR  R+  W  R   LP     W    AEESH +T+  +     GE  LTGE  GR MW            D K+   LA  G+ +   SF+ +VNPNSAD  +R Q I ++  A   P   K  P++   A RK + YY MLQ +DGHW GDYGGP FLMPGL+ A YI   P   L  E  E M+ Y++ HQQ DGGWG H+ESPS+ FG+V+ Y++LRL+G    DPTC     FI+ HGGA+M  SW KF+L + G   W+G NSVP EMWLLP WFPFHPGR+WCH RMVYLPM YLY  R+   +A  D L+  LR ELY+ PY  I W   RH  + +D Y P+S LM+  QN L+ YE   W         +R +G  F   Y+ AED QTN++DIGPVNK LNM+  +  A G  E    KRH+ R+ DY+W+AEDGMKM+GYNGSQCWDTSF VQ + + GL++ FP   ++ ++YL+R QI + E          + A+Y   ++RHISKGGWPFST+AHGWPI+DCT EGLKGVL L+ +  V+EG     +  I   RLEDA +ILL+YQN DGG+ATYENNRG+GW+E LNPSEVFG IMIDYSY E + A +TA+ +F++ FP+HRS EI  AI  G  F++S+QRPDGSWYGSW  CF YG WFGIEGL+  GE P TS S+++A  FLL HQ+ NGGWGE + SC DK Y  +G  +  G+ GSGVV TAWA+L L A +C+D EA+ +GVR+LM +Q   GDW QEGI GVFNR CGITY+ YRN+FP+WALGR
Sbjct:  122 LFLTQYFLPAVSDPGGPRPHRIQRQPQWENRPIPLPESMKQWRCVIAEESHAITEEAF-----GESLLTGEPFGRDMWTQEPYKSKLKAVDEKLVHELASGGRSD---SFNPSVNPNSADIPYRAQLIREYLAAGNSPPSLKKEPQSVQAALRKAVHYYSMLQRDDGHWGGDYGGPHFLMPGLVVAWYIMGKPKSMLDDESIELMKHYIRCHQQSDGGWGTHLESPSTQFGSVLMYLALRLMGADKEDPTCQKGLHFIRLHGGALMTASWAKFYLCLAGCMHWDGHNSVPPEMWLLPNWFPFHPGRMWCHARMVYLPMGYLYGSRYVYTEAETDTLIKDLRQELYIQPYESIDWIKTRHMVAPMDNYSPISKLMETAQNLLARYET--WTVFQPLKNLVRPRGIKFCAEYMAAEDLQTNFIDIGPVNKVLNMISAYDVANGNLEDHNVKRHIARVADYMWVAEDGMKMKGYNGSQCWDTSFAVQGIYEAGLMDEFPDVSKRVWAYLERCQILSTETSMATEAYKYESAAYRARFYRHISKGGWPFSTSAHGWPISDCTGEGLKGVLCLLKSKAVLEGIENGTLKAISTRRLEDAANILLTYQNEDGGFATYENNRGFGWYEDLNPSEVFGSIMIDYSYCECSMASLTALVEFHETFPDHRSDEICHAIDKGRDFLKSLQRPDGSWYGSWACCFCYGVWFGIEGLVKCGE-PKTSQSVKKACQFLLHHQRPNGGWGEDFTSCYDKDYAANGM-EVYGDDGSGVVNTAWALLALSAAECDDMEAIRKGVRYLMKRQLPCGDWPQEGIAGVFNRACGITYTAYRNVFPIWALGR 940          
The following BLAST results are available for this feature:
BLAST of NO12G00440.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
GAX17250.19.100e-24752.23cycloartenol synthase [Fistulifera solaris][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G00440NO12G00440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO12G00440.1NO12G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO12G00440.1.cds1NO12G00440.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds2NO12G00440.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds3NO12G00440.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds4NO12G00440.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds5NO12G00440.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds6NO12G00440.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds7NO12G00440.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds8NO12G00440.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds9NO12G00440.1.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds10NO12G00440.1.cds10Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds11NO12G00440.1.cds11Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds12NO12G00440.1.cds12Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds13NO12G00440.1.cds13Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds14NO12G00440.1.cds14Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds15NO12G00440.1.cds15Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO12G00440.1.cds16NO12G00440.1.cds16Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO12G00440.1 ID=NO12G00440.1|Name=NO12G00440.1|organism=Nannochloropsis oceanica|type=mRNA|length=4067bp
CTCTGTTCTTCGTTTTTCGATGAGTTAACGTTTTCTTTTTGTATCTTGTC
TTTTTTCTTTTCTGCTGCGTTCGCTAGCCCTGACATGATTTTGAGCACTA
CGGCCATTGTCGAATTCGTCTTTTTTCATTTCCCCCATCAGCTCTGTGGT
CATTAATCTTTTCCAACCTCGCACACTCCTACACACTCCTCCATCGTATG
TATTCACATCTGTTCCATTCTCTTTTTTTCCCTTACTTTCCTCCATCCTT
CCCTCACCTACCCTCGCGCATTGTACCCTAACGGTATGCCTGCGTTCCTG
AGCCTAACCCGTCCTCTTCGAAATCCACCCGCCCGGCAATCAAAGCGGCG
GCGCGCGACGAAGAAGAAAAGGAAGTGGAGGAAGTCCCGGAGGTGGAGGA
GGATGTGGACCCCTCACTACTGTACTGTTGGTGCAGGTCGGTGCCCTCTT
GCTGCTCTTGTTGCTCATGCAATGGCCCCTCATCCTCGACGGCCATTCTC
TCCTCCTCGATCTCGCCTAAAGGTGGCAAGGCTGCTTGGAAGCTGTCACC
AACGCGAACGTGCAGAGGGGCCGCGGGTGGACGAAGGTACTTTTTCGATT
CTCCTCCCTCGCCTTCCGAATCACTTGTGTCGTTCGTGGTCGAGTCCACG
GCCACATTAGCTGGCGGATCCAGCTTGGAGGGAACAAGGGAGTGGAAGGG
AAAAGAGAGTCGTAGAGGAAGGTATGAGGAGACATGACATCATGGGGTGA
TCATGATCTAAATGGTAAGAGTACCGCTATGCCAGGTAGACAGTGCGGAA
TCTGACCACAAGATGAATGAATTGACATCTCACCTAATATATAAATACAT
GCTACATGCATACATAAAAGCAACGCGTGTCTCACCTCCCGTAGGACAGA
CGTTGCGGCTCCCCCTGCTGTTGGCGCCGCCGCTGCTTCTGCTTCTGCTG
CTGTTGCTGCTGCTGCGCGCATATCGTTCAGGTCGTCTAAGGCTTGTTTC
TTGGGGCAGGGGGCTTGGCGAGATGGGGATCCATCGCGTTTGTTGGGGTT
ATCCTTGCCGTTGTCGTCGGCGTTCATTCCCGAGATGGGGGGAGGAGTGA
GACAGGGAGGAGGTTTTGCCTAGTCCCTTGATGTTGGTATGCTATGCTGA
ATTACTACGGCAGCTGCGGAGGCCACTCTAGCAACGCAAATGCCAATAAG
AGTTACCTTGTGGTAGGGTGTGGAGTGTTGTGAGAGGCGTCACGACTTAC
AACCACAGAACAAACAAGAAGAAGGTGCGTGTGGATGATACCATGAATGA
TACCCAGGAATCATGAAGGGCAAAAACCTCCTCTCCGTCGCCAACTTGTT
TTTCATAGAGCGTGTCTCAAGCCCCCCACATCTGAACCATGCATTCCAGC
CTCGTCACCAACGCATGCACACGCTGAATCCTCCTATCCCCCTCCCACAG
GAATTAGGAAAATGGCGGCAGGCTTTCTGCGGGCGCTCCTGGATAAGGGC
GGCCATGACGAAGGCGGGGACGATAGATTGCTTGTTCCGTTGGCCTTCAC
GGGGCTATGCGTCTTGGGAGCCACAATCTACTCGACTTTCTATGCCCGAC
CAACGTCCTACCCCGGTGGCCCCCGCACCCACCGGCAAGACCGCCGTGCC
TCGTGGACGAAACGAGTCACCACCCTGCCGGCCGGATGGGTGTTTAGTCA
TGCGGAGGAATCGCATGGAGTGACCCAACGGCATTATCAAAACATGCTGG
GGGGTGAAGTCCCCTTAACGGGTGAGGCGGCAGGACGACAGATGTGGTAC
TATGACGGAAAGATGGCCCAGGCGCTGGCAAGAGTTGGGAAGAAAAATGC
CGAGTACAGCTTCAGCGCGGCCGTTAACCCTAACAGTGCCGACAAGGTCT
TCCGCACGCAGCAGATCAGCAAGTGGAAAGGCGCCATGCCCGACCCCAAA
CTCCGGCCCAAGACGGCGGGCGAGGCGGCGAGGAAGGGAATGAGCTACTA
TCAGATGCTGCAGTGCGAGGATGGGCATTGGGCGGGGGACTACGGAGGAC
CGATGTTTCTCATGCCGGGGCTGATTTTCGCGTGCTACATCACCAAGACG
CCTTTGGGGAAGGAGAGGGAGGAGGCCATGCAGGCGTACCTGAAGAACCA
CCAGCAGGAGGACGGAGGCTGGGGCCTACACATCGAAAGCCCTTCCTCAA
TGTTTGGCACGGTCATGTCCTATGTCTCCCTGCGCCTGTTGGGCTTGCCA
GCGTCTGACCCCACCTGCACTGCCGCACACGCCTTCATCCAAGAGCACGG
CGGGGCAGTGATGGCGCCCTCCTGGTGTAAGTTTTGGCTGGCCGTGCTGG
GCCTTCACGAGTGGGAGGGCATCAACAGTGTGCCGGCCGAGATGTGGCTT
CTTCCCCGATGGTTCCCATTCCATCCCGGCCGTCTCTGGTGCCATTGCCG
CATGGTGTACCTTCCCATGTGCTACCTCTACTGCCGCCGCTTCTCCGCCG
ATGCCGCGGCCGACCCCCTCCTCCTGGCCCTCCGCCACGAGCTCTACGTG
ACTCCCTACCACGACATTGCTTGGGACGGGGAGAGGCACGCCTGCAGCGA
CCTGGACGTCTACGATCCCGTCTCGGGCCTCATGAAGTTTCTCCAGAACT
GCCTCTCGTACTACGAACGCGCCCCATGGCTCTGGCTGCGGAAGAAGGGC
ACCGATTTTGCCATTGCCTACATCCACGCCGAGGATCAACAGACCAACTA
CGTCGATATAGGTCCTGTGAACAAGACGCTCAACATGCTCTGTGTTTTTG
CCGAGGGCGGGAAGGAGGCCGAGGCCTTCAAGCGCCACGTCGGCCGTCTG
GATGACTATTTGTGGCTCGCGGAGGATGGGATGAAGATGCAGGGCTACAA
CGGGAGCCAGTGCTGGGACACCTCTTTCCTCGTCCAGGCGATGGCTGACG
GCGGTTTGGTGGAGGCATTCCCCCAAGCCATGCGCAAAGCGTACAGCTAC
CTAGACCGCACTCAGATCAAGGCCGACGAAGACGAGGCCTCTTATTGGTT
CCGACACATCTCCAAAGGTGGCTGGCCGTTCTCGACGGCGGCCCATGGAT
GGCCCATAGCCGACTGCACCGCCGAGGGGTTGAAGGGAGTGCTGGCCCTG
ATGGACGCCCCCTGCGTGGTGGAGGGAGGCGTGCCTCTCATCCCTCCCTC
CCGCCTCGAAGATGCCATGCATATCCTCCTGTCCTACCAGAACGGCGACG
GGGGATGGGCCACGTACGAGAATAATCGGGGATGGGGGTGGTTCGAGCTC
CTCAATCCTTCGGAGGTATTTGGGGACATCATGATCGACTACTCGTATGT
GGAGCTCACCTCCGCCGTTATGACCGCCATGCACAAGTTCAACAAACGGT
TTCCCAACCATCGAAGCAAGGAGATCACGCGCGCCATCGCCAGCGGCGCC
CGTTTCATCCGTTCCATCCAACGGCCGGACGGGTCTTGGTACGGCTCCTG
GGGCATCTGCTTCACCTACGGCACGTGGTTCGGCATCGAGGGCCTCATCG
CCGCCGGGGAGGACCCTGCCACCTCCCCCTCAATCCGACGCGCCCTCGGC
TTCCTCCTCGCCCACCAGCAGGCCAACGGCGGGTGGGGTGAGAGTTATCT
GTCCTGTGTCGACAAAGCCTACCCGGAAGATGGGACGGGACAGACACTGG
GGGAGGGAGGGTCAGGGGTGGTGCAGACGGCGTGGGCGGTGCTGGGGCTG
CTGGCGGGGAAATGCGAGGACAAGGAAGCGATGGAGCGAGGGGTGAGGTT
TCTGATGGCGCAGCAGCAGGAGGATGGGGATTGGGGGCAGGAGGGGATCA
CGGGGGTCTTTAACCGCAATTGTGGCATTACGTACAGTCAGTATCGCAAC
ATCTTCCCGTTGTGGGCCTTGGGGCGATATGCAAAGGAAGTGGAGGAGAA
GGGGAGGTGACAGGGAGGGGAGGGAGAAAAGGGTGGATGGATGGATTGAT
GGAGGGAGGGAGGGAGGGAGATATAGGTTGTCAGTAAGAACCAATAAGGT
TGAGAGAAAAAAAGAAA
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protein sequence of NO12G00440.1

>NO12G00440.1-protein ID=NO12G00440.1-protein|Name=NO12G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=888bp
MIPRNHEGQKPPLRRQLVFHRACLKPPTSEPCIPASSPTHAHAESSYPPP
TGIRKMAAGFLRALLDKGGHDEGGDDRLLVPLAFTGLCVLGATIYSTFYA
RPTSYPGGPRTHRQDRRASWTKRVTTLPAGWVFSHAEESHGVTQRHYQNM
LGGEVPLTGEAAGRQMWYYDGKMAQALARVGKKNAEYSFSAAVNPNSADK
VFRTQQISKWKGAMPDPKLRPKTAGEAARKGMSYYQMLQCEDGHWAGDYG
GPMFLMPGLIFACYITKTPLGKEREEAMQAYLKNHQQEDGGWGLHIESPS
SMFGTVMSYVSLRLLGLPASDPTCTAAHAFIQEHGGAVMAPSWCKFWLAV
LGLHEWEGINSVPAEMWLLPRWFPFHPGRLWCHCRMVYLPMCYLYCRRFS
ADAAADPLLLALRHELYVTPYHDIAWDGERHACSDLDVYDPVSGLMKFLQ
NCLSYYERAPWLWLRKKGTDFAIAYIHAEDQQTNYVDIGPVNKTLNMLCV
FAEGGKEAEAFKRHVGRLDDYLWLAEDGMKMQGYNGSQCWDTSFLVQAMA
DGGLVEAFPQAMRKAYSYLDRTQIKADEDEASYWFRHISKGGWPFSTAAH
GWPIADCTAEGLKGVLALMDAPCVVEGGVPLIPPSRLEDAMHILLSYQNG
DGGWATYENNRGWGWFELLNPSEVFGDIMIDYSYVELTSAVMTAMHKFNK
RFPNHRSKEITRAIASGARFIRSIQRPDGSWYGSWGICFTYGTWFGIEGL
IAAGEDPATSPSIRRALGFLLAHQQANGGWGESYLSCVDKAYPEDGTGQT
LGEGGSGVVQTAWAVLGLLAGKCEDKEAMERGVRFLMAQQQEDGDWGQEG
ITGVFNRNCGITYSQYRNIFPLWALGRYAKEVEEKGR*
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mRNA from alignment at chr12:153059..159841+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO12G00440.1 ID=NO12G00440.1|Name=NO12G00440.1|organism=Nannochloropsis oceanica|type=mRNA|length=6783bp|location=Sequence derived from alignment at chr12:153059..159841+ (Nannochloropsis oceanica)
CTCTGTTCTTCGTTTTTCGATGAGTTAACGTTTTCTTTTTGTATCTTGTC TTTTTTCTTTTCTGCTGCGTTCGCTAGCCCTGACATGATTTTGAGCACTA CGGCCATTGTCGAATTCGTCTTTTTTCATTTCCCCCATCAGCTCTGTGGT CATTAATCTTTTCCAACCTCGCACACTCCTACACACTCCTCCATCGTATG TATTCACATCTGTTCCATTCTCTTTTTTTCCCTTACTTTCCTCCATCCTT CCCTCACCTACCCTCGCGCATTGTACCCTAACGGTATGCCTGCGTTCCTG AGCCTAACCCGTCCTCTTCGAAATCCACCCGCCCGGCAATCAAAGCGGCG GCGCGCGACGAAGAAGAAAAGGAAGTGGAGGAAGTCCCGGAGGTGGAGGA GGATGTGGACCCCTCACTACTGTACTGTTGGTGCAGGTCGGTGCCCTCTT GCTGCTCTTGTTGCTCATGCAATGGCCCCTCATCCTCGACGGCCATTCTC TCCTCCTCGATCTCGCCTAAAGGTGGCAAGGCTGCTTGGAAGCTGTCACC AACGCGAACGTGCAGAGGGGCCGCGGGTGGACGAAGGTACTTTTTCGATT CTCCTCCCTCGCCTTCCGAATCACTTGTGTCGTTCGTGGTCGAGTCCACG GCCACATTAGCTGGCGGATCCAGCTTGGAGGGAACAAGGGAGTGGAAGGG AAAAGAGAGTCGTAGAGGAAGGTATGAGGAGACATGACATCATGGGGTGA TCATGATCTAAATGGTAAGAGTACCGCTATGCCAGGTAGACAGTGCGGAA TCTGACCACAAGATGAATGAATTGACATCTCACCTAATATATAAATACAT GCTACATGCATACATAAAAGCAACGCGTGTCTCACCTCCCGTAGGACAGA CGTTGCGGCTCCCCCTGCTGTTGGCGCCGCCGCTGCTTCTGCTTCTGCTG CTGTTGCTGCTGCTGCGCGCATATCGTTCAGGTCGTCTAAGGCTTGTTTC TTGGGGCAGGGGGCTTGGCGAGATGGGGATCCATCGCGTTTGTTGGGGTT ATCCTTGCCGTTGTCGTCGGCGTTCATTCCCGAGATGGGGGGAGGAGTGA GACAGGGAGGAGGTTTTGCCTAGTCCCTTGATGTTGGTATGCTATGCTGA ATTACTACGGCAGCTGCGGAGGCCACTCTAGCAACGCAAATGCCAATAAG AGTTACCTTGTGGTAGGGTGTGGAGTGTTGTGAGAGGCGTCACGACTTAC AACCACAGAACAAACAAGAAGAAGGTGCGTGTGGATGATACCATGAATGA TACCCAGGAATCATGAAGGGCAAAAACCTCCTCTCCGTCGCCAACTTGTT TTTCATAGAGCGTGTCTCAAGCCCCCCACATCTGAACCATGCATTCCAGC CTCGTCACCAACGCATGCACACGCTGAATCCTCCTATCCCCCTCCCACAG GAATTAGGAAAATGGCGGCAGGCTTTCTGCGGGCGCTCCTGGATAAGGGC GGCCATGACGAAGGCGGGGACGATAGATTGCTTGTTCCGTTGGCCTTCAC GGGGCTATGCGTCTTGGGAGGTATGTACGCAGAATTTGGCCTTCAGAAGA ACAAGTAATATCTGTGTGTATGCACTGACCAGTTCAGGGAAAATGTGCTG TGCCTTAGCCTGGTATTCGGACCCTGTCGTCTGACCCCTCGCCCTCCCTC TTTCCGTACTACCACCCCACATTCGCACATCCCCCCTATCCTCCCGCATT TCCACTTTCTTTCGATTTTCACCTCCGTCCTCTTTCATGCCTCCTGCAGC CACAATCTACTCGACTTTCTATGCCCGACCAACGTCCTACCCCGGTGGCC CCCGCACCCACCGGCAAGACCGCCGTGCCTCGTGGACGAAACGAGTCACC ACCCTGCCGGCCGGATGGGTGTTTAGTCATGCGGAGGAATCGCATGGAGT GACCCAACGGCATTATCAAAACATGCTGGGGGGTGAAGTCCCCTTAACGG GTGAGGCGGCAGGACGACAGATGTGGTACTATGACGGAAAGATGGCCCAG GCGCTGGCAAGAGTTGGGAAGAAAAATGCCGAGTACAGCTTCAGCGCGGC CGTTAACCCTAACAGGTACTTGTCGTATCTATGGGCACCATAGACTGTAC ACACACTAAAGTATATATAGGCCTGCAATATATATATATATATATGTAGA TAGTGGAAGCGAATGACATTTCGTGGCCATTTCCCCCCCTCCCTTCGACC TCACTCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCC ACAGTGCCGACAAGGTCTTCCGCACGCAGCAGATCAGCAAGTGGAAAGGC GCCATGCCCGACCCCAAACTCCGGCCCAAGACGGCGGGCGAGGCGGCGAG GAAGGGAATGAGCTACTATCAGATGCTGCAGTGCGAGGATGGGTGAGATG GGGGGGGGCGGGAGGGAAGGAGGGGGGCAGAATAGACCTTCCATTTCCTA CATTTTACCCTCCTTCTATCTATCACTCCCTCCCTCCCCCTCTCCGTTTC TGTTTTAAGTCACTGGACAGAAGGACATGTTTCTCGTGGCGGGGTGATAT TGGTTTATTTTGTCACATGGACCCCGCCTGGGAAGACAGGAGAGGAATTC TTGCAACCATCCACCCGGTCCTCCCCCACTCCCTCCCCCCCCCCTCCCTC CCTCCCTCCCTTTCCCCTCCAGGCATTGGGCGGGGGACTACGGAGGACCG ATGTTTCTCATGCCGGGGCTGATTTTCGCGTGCTACATCACCAAGACGCC TTTGGGGAAGGAGAGGGAGGAGGCCATGCAGGCGTACCTGAAGAACCACC AGCAGGAGGACGGAGGCTGGGGCCTACACATCGAAAGCCCTTCCTCAATG TTTGGCACGGTCATGTCCTATGTCTCCCTGCGCCTGTTGGGCTTGCCAGC GGTGCGTCCTCGTGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT CCCTCCCTGTCGCGGACCTTCCCTCTCGATAATAACAGCGGCTCGTCCCC CCCCTCACACCCCTCCCTTCCTCCCTCCTTCCCTCCCTCCCTTCCTCCTT CAGTCTGACCCCACCTGCACTGCCGCACACGCCTTCATCCAAGAGCACGG CGGGGCAGTGATGGCGCCCTCCTGGTGTAAGTTTTGGCTGGCCGTGCTGG GCCTTCACGAGTGGGAGGGCATCAACAGTGTGCCGGCCGAGATGTGGTGA GGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAAGCACAGGGAT TGGAGGCACAGGGGAGGGTGGGAAGGAAGGAAGGAGGGAGGGAGGCAGAG GGGAAGGAGGATAAATTCAAGTATCCGTTAAATAGAAACCGCCCACTACC CCCCCCCCCCCTCTCTCTGCAGGCTTCTTCCCCGATGGTTCCCATTCCAT CCCGGCCGTCTCTGGTGCCATTGCCGCATGGTACGTCTCCTCCCCTTTCT CCCTTCCTCCCCCCCTCTCCAGGTGGCTTTTCCGGATGCCACCTCTGCTG CCACCACGTCTCCACTGTTGCCGCCTACGCCCTTCTCCTCCTCCTCGCCC TACAGCGAGACCTTTCCCTTTCTCCCCACTCAAACCAATCCAAGCCCTCC TTCCTACTTGCCTCCCTCCTTCCCTCTCTCCCTTCTGGTCTCCTTCCCTT CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCTA GGTGTACCTTCCCATGTGCTACCTCTACTGCCGCCGCTTCTCCGCCGATG CCGCGGCCGACCCCCTCCTCCTGGCCCTCCGCCACGAGCTCTACGTGACT CCCTACCACGACATTGCTTGGGACGGGGAGAGGCACGCCTGCAGCGACCT GGACGTCTACGATCCCGTGAGGAGGGAGGGAGGGAGGGAGGGAGGAAAGG GAGGAGGGAGGGAGGGAGGGATGGAAGGGAGGATGGAAGGACGGAGGGAA GGGACGGAGGGAAGGAGGAAGGGAGGGGAAGGAGGGAGGAAGGAGGGAGG GAGGGGAGGGAGGGAGGGAAGGGAGAGAGGGAAGGGAGGGAAGGGAGGAC CGAGTGATGTAACCGGTCGCTGGCAAACAACCGAGACTCACCCCTCCTTC CCTCCCCCCTCCCTCCCCGCCTCCCTCCCTCCCTTCCAGGTCTCGGGCCT CATGAAGTTTCTCCAGAACTGCCTCTCGTACTACGAACGCGCCCCATGGC TCTGGCTGCGGAAGAAGGGCACCGATTTTGCCATTGCCTACATCCACGCC GAGGATCAACAGACCAACTACGTCGATATAGGTGGGTGTCCCTCCCTCCC TCTTTCCTCCCTCAATCCCTCCCTCAATCCCTTGTTGTCTTCCTCCGAGA AAGCGATCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCGAGGG ATCGGTCCTCCCTTTCACCCTTCCCCTCCCTCCCTCTTTTTCCAGGTCCT GTGAACAAGACGCTCAACATGCTCTGTGTTTTTGCCGAGGGCGGGAAGGA GGCCGAGGCCTTCAAGCGCCACGTCGGCCGTCTGGATGACTATTTGTGGC TCGCGGAGGATGGGATGAAGATGCAGGTGAGGGAGGGAAGGAGGGAGGGA GGGAGGGACGGAGAGAGGGAGTCAGGCCAGGAGGTCGCTTTTAGTGTCCT GAACTCTCAGTCATTCACTCGCTGAGCCTTTGCATCAACCCTCTGCAATA TCCTCCCCTACCCTCCCTCCCTCCCTCCCTCCCTCAGGGCTACAACGGGA GCCAGTGCTGGGACACCTCTTTCCTCGTCCAGGCGATGGCTGACGGCGGT TTGGTGGAGGCATTCCCCCAAGCCATGCGCAAAGCGTACAGGTAGGTAGG TAGGTAGGTAGGTAGGTAGGTAGGGAGGGAGGGAGGAAGGGGTTGAGGAG CAAGGAGTACGTGGTGATGCTGAGGTGGCGTTGCCTGATTTTCGTTCCTC CCTCCCTCCCTCCCTTCCTCCTTCCTTCACCAGCTACCTAGACCGCACTC AGATCAAGGCCGACGAAGACGAGGCCTCTTATTGGTTCCGACACATCTCC AAAGGTGCGTATACTCTTGCCTTCCCCCCTCCTTTCCTTCCTCCCTCCCC TCCCTCCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCTG AACCTCCCGCCCGCCCTCCCTTCCCAGGTGGCTGGCCGTTCTCGACGGCG GCCCATGGATGGCCCATAGCCGACTGCACCGCCGAGGGGTTGAAGGGAGT GCTGGCCCTGATGGACGCCCCCTGCGTGGTGGAGGGAGGTGAGGAGGGAG GAAGGGGGGGAGGAAACGAGGCAGGGAAGAAGAGAGGGAAGAAAAGAGGC GCATCCGTGGTGCAACAAGATTCATCCCGTGTTCCCCCTCCCTCCCCCTC TCCCTCCCCAGGCGTGCCTCTCATCCCTCCCTCCCGCCTCGAAGATGCCA TGCATATCCTCCTGTCCTACCAGAACGGCGACGGGGGATGGGCCACGTAC GAGAATAATCGGGGATGGGGGTGGTTCGAGCTCCTCAATCCTTCGGAGGT GGGATGGGAGGGAGGGAGGAAGGGCGGGAGGGAGGGCGAGGCCTGCAGGC AGGCACAAGAGTCCTCTTTCTAGACCCACCCACATACCAATCCTTCCTAC CTCCCTCCCTCCCTCCCTCTCTCCCCCCTTCCTCCTCCTCCCCCTCTGCA GGTATTTGGGGACATCATGATCGACTACTCGTATGTGGAGCTCACCTCCG CCGTTATGACCGCCATGCACAAGTTCAACAAACGGTTTCCCAACCATCGA AGCAAGGAGGTAGGGCAAACAGGGAGGGAGGGAGGGAGGGAGGGAAGGAA GGAAAGTGACCACCACCACAGGTATGTGTGTTCTGACGTCCCTCCCTTCC TTCCTCCTTCCCTTCCTCCTTCTTCCCAGATCACGCGCGCCATCGCCAGC GGCGCCCGTTTCATCCGTTCCATCCAACGGCCGGACGGGTCTTGGTACGG CTCCTGGGGCATCTGCTTCACCTACGGCACGTGGTTCGGCATCGAGGTGC GTTCCTTCCCTCCCTTATTCCATCCCTCCCTCCCTCTTTCCCTCCCCCCC CTTCCATCCGTTCTGCCCCTTCAGCAGAGTCGTTGTCTCTCCACTCATCC GTAACTCTTCTCTCGATCGCTCCTTTCCTCCCCCCCCTCACTCATTCCTC CTGTAGGGCCTCATCGCCGCCGGGGAGGACCCTGCCACCTCCCCCTCAAT CCGACGCGCCCTCGGCTTCCTCCTCGCCCACCAGCAGGCCAACGGCGGGT GGGGTGAGAGTTATCTGTCCTGTGTCGACAAAGCCTACCCGGAAGATGGG ACGGGACAGACACTGGGGGAGGGAGGGTCAGGGGTGGTGCAGACGGCGTG GGCGGTGCTGGGGCTGCTGGCGGGGAAATGCGAGGACAAGGAAGCGATGG AGCGAGGGGTGAGGTTTCTGATGGCGCAGCAGCAGGAGGATGGGGATTGG GGGCAGGAGGGGATCACGGGGGTCTTTAACCGCAATTGTGGCATTACGTA CAGTCAGTATCGCAACATCTTCCCGTTGTGGGCCTTGGGGCGATATGCAA AGGAAGTGGAGGAGAAGGGGAGGTGACAGGGAGGGGAGGGAGAAAAGGGT GGATGGATGGATTGATGGAGGGAGGGAGGGAGGGAGATATAGGTTGTCAG TAAGAACCAATAAGGTTGAGAGAAAAAAAGAAA
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Coding sequence (CDS) from alignment at chr12:153059..159841+

>NO12G00440.1 ID=NO12G00440.1|Name=NO12G00440.1|organism=Nannochloropsis oceanica|type=CDS|length=2664bp|location=Sequence derived from alignment at chr12:153059..159841+ (Nannochloropsis oceanica)
ATGATACCCAGGAATCATGAAGGGCAAAAACCTCCTCTCCGTCGCCAACT
TGTTTTTCATAGAGCGTGTCTCAAGCCCCCCACATCTGAACCATGCATTC
CAGCCTCGTCACCAACGCATGCACACGCTGAATCCTCCTATCCCCCTCCC
ACAGGAATTAGGAAAATGGCGGCAGGCTTTCTGCGGGCGCTCCTGGATAA
GGGCGGCCATGACGAAGGCGGGGACGATAGATTGCTTGTTCCGTTGGCCT
TCACGGGGCTATGCGTCTTGGGAGCCACAATCTACTCGACTTTCTATGCC
CGACCAACGTCCTACCCCGGTGGCCCCCGCACCCACCGGCAAGACCGCCG
TGCCTCGTGGACGAAACGAGTCACCACCCTGCCGGCCGGATGGGTGTTTA
GTCATGCGGAGGAATCGCATGGAGTGACCCAACGGCATTATCAAAACATG
CTGGGGGGTGAAGTCCCCTTAACGGGTGAGGCGGCAGGACGACAGATGTG
GTACTATGACGGAAAGATGGCCCAGGCGCTGGCAAGAGTTGGGAAGAAAA
ATGCCGAGTACAGCTTCAGCGCGGCCGTTAACCCTAACAGTGCCGACAAG
GTCTTCCGCACGCAGCAGATCAGCAAGTGGAAAGGCGCCATGCCCGACCC
CAAACTCCGGCCCAAGACGGCGGGCGAGGCGGCGAGGAAGGGAATGAGCT
ACTATCAGATGCTGCAGTGCGAGGATGGGCATTGGGCGGGGGACTACGGA
GGACCGATGTTTCTCATGCCGGGGCTGATTTTCGCGTGCTACATCACCAA
GACGCCTTTGGGGAAGGAGAGGGAGGAGGCCATGCAGGCGTACCTGAAGA
ACCACCAGCAGGAGGACGGAGGCTGGGGCCTACACATCGAAAGCCCTTCC
TCAATGTTTGGCACGGTCATGTCCTATGTCTCCCTGCGCCTGTTGGGCTT
GCCAGCGTCTGACCCCACCTGCACTGCCGCACACGCCTTCATCCAAGAGC
ACGGCGGGGCAGTGATGGCGCCCTCCTGGTGTAAGTTTTGGCTGGCCGTG
CTGGGCCTTCACGAGTGGGAGGGCATCAACAGTGTGCCGGCCGAGATGTG
GCTTCTTCCCCGATGGTTCCCATTCCATCCCGGCCGTCTCTGGTGCCATT
GCCGCATGGTGTACCTTCCCATGTGCTACCTCTACTGCCGCCGCTTCTCC
GCCGATGCCGCGGCCGACCCCCTCCTCCTGGCCCTCCGCCACGAGCTCTA
CGTGACTCCCTACCACGACATTGCTTGGGACGGGGAGAGGCACGCCTGCA
GCGACCTGGACGTCTACGATCCCGTCTCGGGCCTCATGAAGTTTCTCCAG
AACTGCCTCTCGTACTACGAACGCGCCCCATGGCTCTGGCTGCGGAAGAA
GGGCACCGATTTTGCCATTGCCTACATCCACGCCGAGGATCAACAGACCA
ACTACGTCGATATAGGTCCTGTGAACAAGACGCTCAACATGCTCTGTGTT
TTTGCCGAGGGCGGGAAGGAGGCCGAGGCCTTCAAGCGCCACGTCGGCCG
TCTGGATGACTATTTGTGGCTCGCGGAGGATGGGATGAAGATGCAGGGCT
ACAACGGGAGCCAGTGCTGGGACACCTCTTTCCTCGTCCAGGCGATGGCT
GACGGCGGTTTGGTGGAGGCATTCCCCCAAGCCATGCGCAAAGCGTACAG
CTACCTAGACCGCACTCAGATCAAGGCCGACGAAGACGAGGCCTCTTATT
GGTTCCGACACATCTCCAAAGGTGGCTGGCCGTTCTCGACGGCGGCCCAT
GGATGGCCCATAGCCGACTGCACCGCCGAGGGGTTGAAGGGAGTGCTGGC
CCTGATGGACGCCCCCTGCGTGGTGGAGGGAGGCGTGCCTCTCATCCCTC
CCTCCCGCCTCGAAGATGCCATGCATATCCTCCTGTCCTACCAGAACGGC
GACGGGGGATGGGCCACGTACGAGAATAATCGGGGATGGGGGTGGTTCGA
GCTCCTCAATCCTTCGGAGGTATTTGGGGACATCATGATCGACTACTCGT
ATGTGGAGCTCACCTCCGCCGTTATGACCGCCATGCACAAGTTCAACAAA
CGGTTTCCCAACCATCGAAGCAAGGAGATCACGCGCGCCATCGCCAGCGG
CGCCCGTTTCATCCGTTCCATCCAACGGCCGGACGGGTCTTGGTACGGCT
CCTGGGGCATCTGCTTCACCTACGGCACGTGGTTCGGCATCGAGGGCCTC
ATCGCCGCCGGGGAGGACCCTGCCACCTCCCCCTCAATCCGACGCGCCCT
CGGCTTCCTCCTCGCCCACCAGCAGGCCAACGGCGGGTGGGGTGAGAGTT
ATCTGTCCTGTGTCGACAAAGCCTACCCGGAAGATGGGACGGGACAGACA
CTGGGGGAGGGAGGGTCAGGGGTGGTGCAGACGGCGTGGGCGGTGCTGGG
GCTGCTGGCGGGGAAATGCGAGGACAAGGAAGCGATGGAGCGAGGGGTGA
GGTTTCTGATGGCGCAGCAGCAGGAGGATGGGGATTGGGGGCAGGAGGGG
ATCACGGGGGTCTTTAACCGCAATTGTGGCATTACGTACAGTCAGTATCG
CAACATCTTCCCGTTGTGGGCCTTGGGGCGATATGCAAAGGAAGTGGAGG
AGAAGGGGAGGTGA
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Synonyms
Publications